Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Wed Dec 18 16:00:20 2013 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --with-mpi-dir=/soft/compilers/wrappers/xl/ --with-blas-lib=/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a --with-lapack-lib=/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a --with-metis=/soft/libraries/alcf/current/xl/METIS/ --with-parmetis=/soft/libraries/alcf/current/xl/PARMETIS --download-hypre=1 --download-spai --with-debugging=0 Working directory: /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 Machine platform: ('Linux', 'vestalac1', '2.6.32-431.el6.ppc64', '#1 SMP Sun Nov 10 22:17:43 EST 2013', 'ppc64', 'ppc64') Python version: 2.6.6 (r266:84292, Sep 4 2013, 07:46:22) [GCC 4.4.7 20120313 (Red Hat 4.4.7-3)] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/framework.py:821) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:821) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /soft/perftools/darshan/darshan/bin/gdb...not found Checking for program /soft/compilers/wrappers/xl/gdb...not found Checking for program /home/pwang/bin/gdb...not found Checking for program /soft/environment/softenv-1.6.2/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Checking for program /soft/perftools/darshan/darshan/bin/dbx...not found Checking for program /soft/compilers/wrappers/xl/dbx...not found Checking for program /home/pwang/bin/dbx...not found Checking for program /soft/environment/softenv-1.6.2/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /usr/X11R6/bin/dbx...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/dbx...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/dbx...not found Checking for program /soft/debuggers/scripts/bin/dbx...not found Checking for program /soft/accttools/bin/dbx...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/dbx...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/dbx...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/dbx...not found Checking for program /home/pwang/dbx...not found Checking for program /soft/perftools/darshan/darshan/bin/xdb...not found Checking for program /soft/compilers/wrappers/xl/xdb...not found Checking for program /home/pwang/bin/xdb...not found Checking for program /soft/environment/softenv-1.6.2/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /usr/X11R6/bin/xdb...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/xdb...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/xdb...not found Checking for program /soft/debuggers/scripts/bin/xdb...not found Checking for program /soft/accttools/bin/xdb...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/xdb...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/xdb...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/xdb...not found Checking for program /home/pwang/xdb...not found Checking for program /soft/perftools/darshan/darshan/bin/dsymutil...not found Checking for program /soft/compilers/wrappers/xl/dsymutil...not found Checking for program /home/pwang/bin/dsymutil...not found Checking for program /soft/environment/softenv-1.6.2/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /usr/X11R6/bin/dsymutil...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/dsymutil...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/dsymutil...not found Checking for program /soft/debuggers/scripts/bin/dsymutil...not found Checking for program /soft/accttools/bin/dsymutil...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/dsymutil...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/dsymutil...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/dsymutil...not found Checking for program /home/pwang/dsymutil...not found Defined make macro "DSYMUTIL" to "true" Defined "USE_GDB_DEBUGGER" to "1" ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/languages.py:45) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:45) Choose between C and C++ bindings ================================================================================ TEST configureLanguageSupport from PETSc.utilities.languages(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/languages.py:51) TESTING: configureLanguageSupport from PETSc.utilities.languages(config/PETSc/utilities/languages.py:51) Check c-support c++-support and other misc tests Allowing C++ name mangling C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureExternC from PETSc.utilities.languages(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/languages.py:68) TESTING: configureExternC from PETSc.utilities.languages(config/PETSc/utilities/languages.py:68) Protect C bindings from C++ mangling Defined "USE_EXTERN_CXX" to " " ================================================================================ TEST configureFortranLanguage from PETSc.utilities.languages(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/languages.py:74) TESTING: configureFortranLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:74) Turn on Fortran bindings Using Fortran ================================================================================ TEST configureMake from config.programs(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/programs.py:24) TESTING: configureMake from config.programs(config/BuildSystem/config/programs.py:24) Check various things about make Checking for program /soft/perftools/darshan/darshan/bin/make...not found Checking for program /soft/compilers/wrappers/xl/make...not found Checking for program /home/pwang/bin/make...not found Checking for program /soft/environment/softenv-1.6.2/bin/make...not found Checking for program /bin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /soft/perftools/darshan/darshan/bin/strings...not found Checking for program /soft/compilers/wrappers/xl/strings...not found Checking for program /home/pwang/bin/strings...not found Checking for program /soft/environment/softenv-1.6.2/bin/strings...not found Checking for program /bin/strings...not found Checking for program /usr/bin/strings...found Defined make macro "STRINGS" to "/usr/bin/strings" sh: /usr/bin/strings /usr/bin/make Executing: /usr/bin/strings /usr/bin/make sh: /lib64/ld64.so.1 N$"p& _start` $}$y) ~y Q }KX0}k }KX0}k p}).p} HP 80T :})XP| }#KxK x O x O Jy9 }+Kx })[xy l })[xy ] })[xy UN })[xy M })[xy E })[xy > })[xy 6N })[xy }i[x/ y+UN x _ Px W xx W }+Kx }+Kx }KX0}k }KX0}k }KX0}k }KX0}k +x9 x}{[x | Z.x Jy9 (y Q Jy9 }#KxH }#KxH |}$* @}dHP9k (P}$Kxx |}$* @}dHP9k Ij9A p}CSx }+KxA }+Kx/ 3x9) 48! |c(P|c #y|y }#Kx Jy9 p}@Jx| }9H }+J.y* }?HP }|J GY.| $}GP*/ UJ >}P }HP.}k }9@P| @P})H };HP }=Kx }=Kx }K[xy`] U) >}0 #y|} }+J.y* x}\Sx};KxH (}4J $}:J x}1Kx{ };KxK Jy9 (}jX }iKx}) }K[x}i })P* }#Kx }#Kx }#Kx p}J8P}J P8U* x}J@PUJ }i[x 0}#Kx }]HP }?Kx/ #x|} xy > Cx| d}KR }c[x8 I*9 }+Q* x||H*K Jy9 }+J.y+ Jy9 d}KR |kH*; x}kPPUk }:Kx }:Kx }}p U) >}0 }+Kx| }j[x}+KxA sx|o }$Kx }GA {x:@ p}IZx})PP}) {H8x y`UN }=Kx }=Kx xy UN }=Kx }=Kx }i[xK }#KxK +x; }9KxA Jy9 }KX0}k }KX0}k }(HP }5Kx~ }8Kx }$x d})XP x}k.p}) p})XP U*80U+ :}kPP| x}+J }7Kx ({@&N{ {K&Ne) }kH8` xy &N xyk' xy`= #x|} }jZ.yh }+Kx/ } Kx |iJx}+ v}`Jx| H@/ }` P| Jx}+ v}`Jx| +xx }+HP #x|d touch: Archive `%s' does not exist touch: `%s' is not a valid archive touch: touch: Member `%s' does not exist in `%s' touch: Bad return code from ar_member_touch on `%s' attempt to use unsupported feature: `%s' ! ARFILENAMES/ # commands to execute (built-in): (from `%s', line %lu): %.*s *** [%s] Archive member `%s' may be bogus; not deleted *** Archive member `%s' may be bogus; not deleted *** [%s] Deleting file `%s' *** Deleting file `%s' unlink: kill $(MAKE) ${MAKE} .SUFFIXES SUFFIXES ARFLAGS CHECKOUT,v +$(if $(wildcard $@),,$(CO) $(COFLAGS) $< $@) COFLAGS $(CC) -E $(FC) F77FLAGS $(FFLAGS) LINT lint YACC yacc MAKEINFO makeinfo TEXI2DVI texi2dvi WEAVE weave CWEAVE cweave TANGLE tangle CTANGLE ctangle rm -f LINK.o $(CC) $(LDFLAGS) $(TARGET_ARCH) COMPILE.c $(CC) $(CFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.c $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.cc $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c COMPILE.C $(COMPILE.cc) COMPILE.cpp LINK.cc $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) LINK.C $(LINK.cc) LINK.cpp YACC.y $(YACC) $(YFLAGS) LEX.l $(LEX) $(LFLAGS) -t COMPILE.f $(FC) $(FFLAGS) $(TARGET_ARCH) -c LINK.f $(FC) $(FFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.F $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.F $(FC) $(FFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.r $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -c LINK.r $(FC) $(FFLAGS) $(RFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.def $(M2C) $(M2FLAGS) $(DEFFLAGS) $(TARGET_ARCH) COMPILE.mod $(M2C) $(M2FLAGS) $(MODFLAGS) $(TARGET_ARCH) COMPILE.p $(PC) $(PFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.p $(PC) $(PFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) LINK.s $(CC) $(ASFLAGS) $(LDFLAGS) $(TARGET_MACH) COMPILE.s $(AS) $(ASFLAGS) $(TARGET_MACH) LINK.S $(CC) $(ASFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_MACH) COMPILE.S $(CC) $(ASFLAGS) $(CPPFLAGS) $(TARGET_MACH) -c PREPROCESS.S $(CC) -E $(CPPFLAGS) PREPROCESS.F $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -F PREPROCESS.r $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -F LINT.c $(LINT) $(LINTFLAGS) $(CPPFLAGS) $(TARGET_ARCH) OUTPUT_OPTION -o $@ .LIBPATTERNS lib%.so lib%.a $(AR) $(ARFLAGS) $@ $< %.out @rm -f $@ cp $< $@ %.w %.ch $(CTANGLE) $^ $@ %.tex $(CWEAVE) $^ $@ $(CHECKOUT,v) RCS/%,v RCS/% $(GET) $(GFLAGS) $(SCCS_OUTPUT_OPTION) $< SCCS/s.% $(LINK.o) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.s) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.S) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.c) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.C) $^ $(LOADLIBES) $(LDLIBS) -o $@ .cpp $(LINK.cpp) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.f) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.p) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.F) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.r) $^ $(LOADLIBES) $(LDLIBS) -o $@ .mod $(COMPILE.mod) -o $@ -e $@ $^ .def.sym $(COMPILE.def) -o $@ $< cat $< >$@ chmod a+x $@ .s.o $(COMPILE.s) -o $@ $< .S.o $(COMPILE.S) -o $@ $< .c.o $(COMPILE.c) $(OUTPUT_OPTION) $< .cc.o $(COMPILE.cc) $(OUTPUT_OPTION) $< .C.o $(COMPILE.C) $(OUTPUT_OPTION) $< .cpp.o $(COMPILE.cpp) $(OUTPUT_OPTION) $< .f.o $(COMPILE.f) $(OUTPUT_OPTION) $< .p.o $(COMPILE.p) $(OUTPUT_OPTION) $< .F.o $(COMPILE.F) $(OUTPUT_OPTION) $< .r.o $(COMPILE.r) $(OUTPUT_OPTION) $< .mod.o $(COMPILE.mod) -o $@ $< .c.ln $(LINT.c) -C$* $< .y.ln $(YACC.y) $< $(LINT.c) -C$* y.tab.c $(RM) y.tab.c .l.ln @$(RM) $*.c $(LEX.l) $< > $*.c $(LINT.c) -i $*.c -o $@ $(RM) $*.c .y.c $(YACC.y) $< mv -f y.tab.c $@ .l.c @$(RM) $@ $(LEX.l) $< > $@ .F.f $(PREPROCESS.F) $(OUTPUT_OPTION) $< .r.f $(PREPROCESS.r) $(OUTPUT_OPTION) $< .l.r $(LEX.l) $< > $@ mv -f lex.yy.r $@ .S.s $(PREPROCESS.S) $< > $@ .texinfo.info $(MAKEINFO) $(MAKEINFO_FLAGS) $< -o $@ .texi.info .txinfo.info .tex.dvi $(TEX) $< .texinfo.dvi $(TEXI2DVI) $(TEXI2DVI_FLAGS) $< .texi.dvi .txinfo.dvi .w.c $(CTANGLE) $< - $@ .web.p $(TANGLE) $< .w.tex $(CWEAVE) $< - $@ .web.tex $(WEAVE) $< # Directories # %s: could not be stat'd. # %s (device %ld, inode %ld): could not be opened. # %s (device %ld, inode %ld): files, impossibilities so far. impossibilities in %lu directories. unterminated variable reference warning: undefined variable `%.*s' Recursive variable `%s' references itself (eventually) print_file enter_file lookup_file # Files # files hash-table stats: %04d-%02d-%02d %02d:%02d:%02d .%09d # Not a target: %s:%s | %s # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # Command-line target. # A default, MAKEFILES, or -include/sinclude makefile. # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: `%s' # File is an intermediate prerequisite. # Also makes: # Modification time never checked. # File does not exist. # File is very old. # Last modified %s # File has been updated. # File has not been updated. # Commands currently running (THIS IS A BUG). # Dependencies commands running (THIS IS A BUG). # Successfully updated. question_flag file.c # Needs to be updated (-q is set). # Failed to be updated. # Invalid value in `update_status' member! %s: Timestamp out of range; substituting %s Current time *** Deleting intermediate file `%s' Removing intermediate files... Commands were specified for file `%s' at %s:%lu, Commands for file `%s' were found by implicit rule search, but `%s' is now considered the same file as `%s'. Commands for `%s' will be ignored in favor of those for `%s'. can't rename single-colon `%s' to double-colon `%s' can't rename double-colon `%s' to single-colon `%s' *name != '\0' .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL undefined recursive simple Internal error: func_error: '%s' %s: '%s' insufficient number of arguments (%d) to function `%s' unimplemented on this platform: function `%s' default environment file environment override command line override automatic non-numeric first argument to `wordlist' function non-numeric second argument to `wordlist' function invalid first argument to `wordlist' function: `%d' non-numeric first argument to `word' function first argument to `word' function must be greater than 0 suffix basename addprefix %s:%lu: pipe fork Cleaning up temporary batch file %s filter unterminated call to function `%s': missing `%c' abspath addsuffix notdir subst filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard word wordlist words origin foreach call error warning value eval Avoiding implicit rule recursion. Trying pattern rule with stem `%.*s'. Rejecting impossible implicit prerequisite `%s'. Rejecting impossible rule prerequisite `%s'. Trying implicit prerequisite `%s'. Trying rule prerequisite `%s'. Found prerequisite `%s' as VPATH `%s' Looking for a rule with intermediate file `%s'. Looking for an implicit rule for `%s'. Looking for archive-member implicit rule for `%s'. construct_command_argv_internal start_waiting_job ap <= end job.c %s (line %d) Bad shell context (!unixy && !batch_mode_shell) $(SHELL) $(IFS) %s: Command not found SHELL %s: Shell program not found execvp: INTERNAL: Freeing child 0x%08lx (%s) but no tokens left! write jobserver Released token for child 0x%08lx (%s). /bin/sh vfork cannot enforce load limits on this operating system cannot enforce load limit: getloadavg Estimated system load = %f (actual = %f) (max requested = %f) Putting child 0x%08lx (%s) PID %ld%s on the chain. (remote) f->command_state == cs_finished [%s] Error %d (ignored) *** [%s] Error %d (core dumped) *** [%s] %s%s *** Waiting for unfinished jobs.... Live child 0x%08lx (%s) PID %ld %s remote_status wait Reaping losing child 0x%08lx PID %ld %s Reaping winning child 0x%08lx PID %ld %s Cleaning up temp batch file %s .DELETE_ON_ERROR Removing child 0x%08lx PID %ld%s from chain. don't Need a job token; we %shave children Duplicate the job FD INTERNAL: no children as we go to sleep on read Obtained token for child 0x%08lx (%s). read jobs pipe EOF read jobs pipe Read returned EBADF. break case continue exec exit export login logout read readonly shift switch test times trap umask while $(-*-command-variables-*-) $(MAKEOVERRIDES) main %s: Entering an unknown directory %s: Leaving an unknown directory %s: Entering directory `%s' %s: Leaving directory `%s' %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory `%s' %s[%u]: Leaving directory `%s' %sGNU Make %s %sCopyright (C) 2006 Free Software Foundation, Inc. %sThis is free software; see the source for copying conditions. %sThere is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A %sPARTICULAR PURPOSE. %sThis program built for %s %sThis program built for %s (%s) # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! write INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name MAKECMDGOALS the `-%c' option requires a non-empty string argument the `-%c' option requires a positive integral argument Usage: %s [options] [target] ... This program built for %s This program built for %s (%s) Report bugs to MFLAGS MAKEFLAGS make /usr/share/locale getcwd .VARIABLES .FEATURES target-specific order-only second-expansion else-if archives jobserver check-symlink MAKE_RESTARTS unknown debug level specification `%s' MAKE_COMMAND MAKE $(MAKE_COMMAND) -*-command-variables-*- MAKEOVERRIDES ${-*-command-variables-*-} MAKELEVEL CURDIR Makefile from standard input specified twice. TMPDIR /tmp GmXXXXXX fopen (temporary file) fwrite (temporary file) .DEFAULT .DEFAULT_GOAL internal error: multiple --jobserver-fds options %d,%d internal error: invalid --jobserver-fds string `%s' warning: -jN forced in submake: disabling jobserver mode. dup jobserver warning: jobserver unavailable: using -j1. Add `+' to parent make rule. More parallel jobs (-jN) than this platform can handle requested. Resetting to single job (-j1) mode. creating jobs pipe init jobserver pipe Updating makefiles.... Makefile `%s' might loop; not remaking it. Failed to remake makefile `%s'. Included makefile `%s' was not found. Makefile `%s' was not found chdir Re-executing[%u]: %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%u main.c unlink (temporary file): .DEFAULT_GOAL contains more than one target No targets specified and no makefile found No targets Updating goal targets.... warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. always-make directory basic debug environment-overrides help ignore-errors include-dir jobs jobserver-fds keep-going load-average check-symlink-times just-print old-file print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version print-directory no-print-directory what-if warn-undefined-variables quiet stop new-file assume-new assume-old max-load dry-run recon makefile Options: -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from commands. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any commands; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -p, --print-data-base Print make's internal database. -q, --question Run no commands; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo commands. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. hash_strfree hash_strdup hash_savestring d == h misc.c %s:%lu: *** %s: *** %s[%u]: *** . Stop. virtual memory exhausted h->count != 0 %s: %s %s: %s[%u]: write error: %s write error %s%s: %s eval record_target_var $(HOME) HOME /usr/include .INCLUDE_DIRS warning: NUL character seen; rest of line ignored define endef Extraneous text after `endef' directive missing `endef', unterminated `define' ifdef ifndef ifeq ifneq else endif Extraneous text after `%s' directive extraneous `%s' only one `else' per conditional prerequisites cannot be defined in command scripts .POSIX .SECONDEXPANSION mixed implicit and static pattern rules mixed implicit and normal rules target `%s' doesn't match the target pattern target file `%s' has both : and :: entries target `%s' given more than once in the same rule. warning: overriding commands for target `%s' warning: ignoring old commands for target `%s' invalid syntax in conditional extraneous `endef' empty variable name empty `override' directive invalid `override' directive unexport vpath include -include sinclude commands commence before first target missing rule before commands missing separator%s (did you mean TAB instead of 8 spaces?) *p2 != '\0' read.c v != 0 Malformed target-specific variable definition missing target pattern multiple target patterns target pattern contains no `%%' missing `endif' Reading makefile `%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) /usr/gnu/include /usr/local/include GNUmakefile Makefile update_file_1 lstat: readlink: $(strip $(.LIBPATTERNS)) .LIBPATTERNS element `%s' is not a pattern %s/%s Warning: File `%s' has modification time %.2g s in the future touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: %sNo rule to make target `%s'%s %sNo rule to make target `%s', needed by `%s'%s Pruning file `%s'. Considering target file `%s'. Recently tried and failed to update file `%s'. File `%s' was considered already. Still updating file `%s'. Finished updating file `%s'. File `%s' does not exist. *** Warning: .LOW_RESOLUTION_TIME file `%s' has a high resolution time stamp Found an implicit rule for `%s'. No implicit rule found for `%s'. Using default commands for `%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file `%s'. The prerequisites of `%s' are being made. Giving up on target file `%s'. Target `%s' not remade because of errors. Prerequisite `%s' is order-only for target `%s'. Prerequisite `%s' of target `%s' does not exist. Prerequisite `%s' is newer than target `%s'. Prerequisite `%s' is older than target `%s'. Target `%s' is double-colon and has no prerequisites. No commands for `%s' and no prerequisites actually changed. Making `%s' due to always-make flag. No need to remake target `%s' ; using VPATH name `%s' Must remake target `%s'. Ignoring VPATH name `%s'. Commands of `%s' are being run. Failed to remake target file `%s'. Successfully remade target file `%s'. Target file `%s' needs remade under -q. file->update_status >= 0 && file->update_status <= 2 remake.c Nothing to be done for `%s'. `%s' is up to date. /lib /usr/lib /usr/lib64 # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. BUG: num_pattern_rules wrong! %u != %u (%.o) add_string %s # of strings in strcache: %d %s # of strcache buffers: %d %s strcache size: total = %d / max = %d / min = %d / avg = %d %s strcache free: total = %d / max = %d / min = %d / avg = %d best->bytesfree > len strcache.c pop_variable_scope environment under -e (from `%s', line %lu) define %s endef %s %s= $(subst ,,%s) # variable set hash-table stats: # Variables # Pattern-specific Variable Values %s : # %u pattern-specific variable values # No pattern-specific variable values. current_variable_set_list->next != ((void *)0) variable.c %s%s%s MAKE_VERSION MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) 3.81 powerpc64-redhat-linux-gnu # VPATH Search Paths vpath %s %s%c # No `vpath' search paths. # %u `vpath' search paths. # No general (`VPATH' variable) search path. # General (`VPATH' variable) search path: $(strip $(VPATH)) $(strip $(GPATH)) Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% can't allocate %ld bytes for hash table: memory exhausted A~ F A~ F A~ F A~ F A~ F .out .a .ln .o .c .cc .C .cpp .p .f .F .r .y .l .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el ;(/bin/sh #;"*?[]&|<>(){}$`^~! -c hNnk( libc.so.6 fflush strcpy __rawmemchr __printf_chk fnmatch readdir _IO_putc setlocale strsignal strncmp optind strrchr wait pipe __strdup dcgettext closedir sigprocmask __stack_chk_fail __lxstat unlink realloc abort stdin _exit getpid kill __assert_fail mkstemp strtod strtol feof getloadavg fgets getpwnam calloc strlen sigemptyset memset glob strstr __errno_location chdir memcmp dup2 __fprintf_chk sigaddset ctime putenv stdout fputs lseek memcpy fclose malloc strcat remove __strncpy_chk opendir getenv __ctype_b_loc sscanf optarg stderr alarm getlogin readlink setrlimit getopt_long execvp __fxstat __realpath_chk getcwd fwrite fread gettimeofday sigaction waitpid localtime strchr vfork __vfprintf_chk fdopen qsort __strcpy_chk __ctype_tolower_loc setvbuf fcntl __sprintf_chk bsd_signal __xstat getrlimit memmove bindtextdomain opterr strcmp strerror __libc_start_main ferror globfree __environ __cxa_atexit GLIBC_2.4 GLIBC_2.3.4 GLIBC_2.3 /lib64/ld64.so.1 Defined make macro "OMAKE " to "/usr/bin/make --no-print-directory" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC} ${SOBJSC})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} module multiprocessing found 48 cores: using make_np = 16 Defined make macro "MAKE_NP" to "16" ================================================================================ TEST configureMkdir from config.programs(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/programs.py:109) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:109) Make sure we can have mkdir automatically make intermediate directories Checking for program /soft/perftools/darshan/darshan/bin/mkdir...not found Checking for program /soft/compilers/wrappers/xl/mkdir...not found Checking for program /home/pwang/bin/mkdir...not found Checking for program /soft/environment/softenv-1.6.2/bin/mkdir...not found Checking for program /bin/mkdir...found sh: /bin/mkdir -p .conftest/tmp Executing: /bin/mkdir -p .conftest/tmp sh: Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configurePrograms from config.programs(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/programs.py:131) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:131) Check for the programs needed to build and run PETSc Checking for program /soft/perftools/darshan/darshan/bin/sh...not found Checking for program /soft/compilers/wrappers/xl/sh...not found Checking for program /home/pwang/bin/sh...not found Checking for program /soft/environment/softenv-1.6.2/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /soft/perftools/darshan/darshan/bin/sed...not found Checking for program /soft/compilers/wrappers/xl/sed...not found Checking for program /home/pwang/bin/sed...not found Checking for program /soft/environment/softenv-1.6.2/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" All intermediate test results are stored in /tmp/petsc-lj0zFz All intermediate test results are stored in /tmp/petsc-lj0zFz/config.programs sh: /bin/sed -i s/sed/sd/g "/tmp/petsc-lj0zFz/config.programs/sed1" Executing: /bin/sed -i s/sed/sd/g "/tmp/petsc-lj0zFz/config.programs/sed1" sh: Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /soft/perftools/darshan/darshan/bin/mv...not found Checking for program /soft/compilers/wrappers/xl/mv...not found Checking for program /home/pwang/bin/mv...not found Checking for program /soft/environment/softenv-1.6.2/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /soft/perftools/darshan/darshan/bin/cp...not found Checking for program /soft/compilers/wrappers/xl/cp...not found Checking for program /home/pwang/bin/cp...not found Checking for program /soft/environment/softenv-1.6.2/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /soft/perftools/darshan/darshan/bin/grep...not found Checking for program /soft/compilers/wrappers/xl/grep...not found Checking for program /home/pwang/bin/grep...not found Checking for program /soft/environment/softenv-1.6.2/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /soft/perftools/darshan/darshan/bin/rm...not found Checking for program /soft/compilers/wrappers/xl/rm...not found Checking for program /home/pwang/bin/rm...not found Checking for program /soft/environment/softenv-1.6.2/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /soft/perftools/darshan/darshan/bin/diff...not found Checking for program /soft/compilers/wrappers/xl/diff...not found Checking for program /home/pwang/bin/diff...not found Checking for program /soft/environment/softenv-1.6.2/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found sh: "/usr/bin/diff" -w "/tmp/petsc-lj0zFz/config.programs/diff1" "/tmp/petsc-lj0zFz/config.programs/diff2" Executing: "/usr/bin/diff" -w "/tmp/petsc-lj0zFz/config.programs/diff1" "/tmp/petsc-lj0zFz/config.programs/diff2" sh: Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/pwang/ps...not found Checking for program /soft/perftools/darshan/darshan/bin/gzip...not found Checking for program /soft/compilers/wrappers/xl/gzip...not found Checking for program /home/pwang/bin/gzip...not found Checking for program /soft/environment/softenv-1.6.2/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMercurial from config.sourceControl(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/sourceControl.py:23) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:23) Find the Mercurial executable Checking for program /soft/perftools/darshan/darshan/bin/hg...not found Checking for program /soft/compilers/wrappers/xl/hg...not found Checking for program /home/pwang/bin/hg...not found Checking for program /soft/environment/softenv-1.6.2/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/bin/hg...found Defined make macro "HG" to "hg" sh: hg version -q Executing: hg version -q sh: Mercurial Distributed SCM (version 1.4) ================================================================================ TEST configureCVS from config.sourceControl(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/sourceControl.py:34) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:34) Find the CVS executable Checking for program /soft/perftools/darshan/darshan/bin/cvs...not found Checking for program /soft/compilers/wrappers/xl/cvs...not found Checking for program /home/pwang/bin/cvs...not found Checking for program /soft/environment/softenv-1.6.2/bin/cvs...not found Checking for program /bin/cvs...not found Checking for program /usr/bin/cvs...found Defined make macro "CVS" to "cvs" sh: cvs --version Executing: cvs --version sh: Concurrent Versions System (CVS) 1.11.23 (client/server) Copyright (C) 2006 Free Software Foundation, Inc. Senior active maintainers include Larry Jones, Derek R. Price, and Mark D. Baushke. Please see the AUTHORS and README files from the CVS distribution kit for a complete list of contributors and copyrights. CVS may be copied only under the terms of the GNU General Public License, a copy of which can be found with the CVS distribution kit. Specify the --help option for further information about CVS ================================================================================ TEST configureSubversion from config.sourceControl(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/sourceControl.py:43) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:43) Find the Subversion executable Checking for program /soft/perftools/darshan/darshan/bin/svn...not found Checking for program /soft/compilers/wrappers/xl/svn...not found Checking for program /home/pwang/bin/svn...not found Checking for program /soft/environment/softenv-1.6.2/bin/svn...not found Checking for program /bin/svn...not found Checking for program /usr/bin/svn...found Defined make macro "SVN" to "svn" sh: svn --version -q Executing: svn --version -q sh: 1.6.11 ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/petscdir.py:28) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:28) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 3 #define PETSC_VERSION_SUBMINOR 0 #define PETSC_VERSION_PATCH 6 #define PETSC_VERSION_DATE "Jun, 5, 2012" #define PETSC_VERSION_PATCH_DATE "Mon Feb 11 12:26:34 CST 2013" #define PETSC_VERSION_HG "e4fbe4834f28c1f9858832b33fd5706ff7ec3c62" #define PETSC_VERSION_DATE_HG "Mon Feb 11 12:06:41 2013 -0600" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6" Defined "DIR" to ""/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6"" ================================================================================ TEST configureExternalPackagesDir from PETSc.utilities.petscdir(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/petscdir.py:75) TESTING: configureExternalPackagesDir from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:75) ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscdir(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/petscdir.py:82) TESTING: configureInstallationMethod from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:82) This is a tarball installation ================================================================================ TEST configureETags from PETSc.utilities.Etags(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise Found etags file ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be Defined make macro "DATAFILESPATH" to "None" ================================================================================ TEST resetEnvCompilers from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1472) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1472) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1453) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1453) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST checkVendor from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:379) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:379) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:389) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:389) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:505) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:505) Locate a functional C compiler sh: mpicc --help Executing: mpicc --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to sh: hcc --help Executing: hcc --help sh: sh: mpicc --help Executing: mpicc --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to Checking for program /soft/perftools/darshan/darshan/bin/mpicc...not found Checking for program /soft/compilers/wrappers/xl/mpicc...found Defined make macro "CC" to "mpicc" Pushing language C All intermediate test results are stored in /tmp/petsc-lj0zFz/config.setCompilers sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:540) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:540) Locate a functional C preprocessor Checking for program /soft/perftools/darshan/darshan/bin/mpicc...not found Checking for program /soft/compilers/wrappers/xl/mpicc...found Defined make macro "CPP" to "mpicc -E" Pushing language C sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 68 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 98 typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) ; #line 145 extern double atof (const char *__nptr) __attribute__ ((__pure__)) ; extern int atoi (const char *__nptr) __attribute__ ((__pure__)) ; extern long int atol (const char *__nptr) __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__pure__)) ; #line 165 extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) ; #line 173 extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) ; extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) ; #line 184 extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 195 __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 209 __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 311 extern char *l64a (long int __n) ; #line 314 extern long int a64l (const char *__s) __attribute__ ((__pure__)) ; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 327 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int random (void) ; #line 330 extern void srandom (unsigned int __seed) ; #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; #line 341 extern char *setstate (char *__statebuf) ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) ; #line 380 extern int rand (void) ; extern void srand (unsigned int __seed) ; #line 387 extern int rand_r (unsigned int *__seed) ; #line 395 extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; #line 399 extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; #line 404 extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; #line 409 extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; #line 471 extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) ; #line 493 extern void cfree (void *__ptr) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern void *alloca (size_t __size) ; #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; #line 514 extern void abort (void) __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; #line 544 extern void exit (int __status) __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) __attribute__ ((__noreturn__)); #line 567 extern char *getenv (const char *__name) ; #line 572 extern char *__secure_getenv (const char *__name) ; #line 579 extern int putenv (char *__string) ; #line 585 extern int setenv (const char *__name, const char *__value, int __replace) ; #line 589 extern int unsetenv (const char *__name) ; #line 596 extern int clearenv (void) ; #line 606 extern char *mktemp (char *__template) ; #line 620 extern int mkstemp (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) ; #line 717 extern int system (const char *__command) ; #line 734 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) ; #line 742 typedef int (*__compar_fn_t) (const void *, const void *); #line 755 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 771 extern int abs (int __x) __attribute__ ((const)) ; extern long int labs (long int __x) __attribute__ ((const)) ; #line 776 __extension__ extern long long int llabs (long long int __x) __attribute__ ((const)) ; #line 785 extern div_t div (int __numer, int __denom) __attribute__ ((const)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((const)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((const)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; #line 860 extern int mblen (const char *__s, size_t __n) ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) ; extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) ; #line 885 extern int rpmatch (const char *__response) ; #line 896 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) ; #line 948 extern int getloadavg (double __loadavg[], int __nelem) ; Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:574) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:574) Locate a functional CUDA compiler Checking for program /soft/perftools/darshan/darshan/bin/nvcc...not found Checking for program /soft/compilers/wrappers/xl/nvcc...not found Checking for program /home/pwang/bin/nvcc...not found Checking for program /soft/environment/softenv-1.6.2/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/X11R6/bin/nvcc...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/nvcc...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/nvcc...not found Checking for program /soft/debuggers/scripts/bin/nvcc...not found Checking for program /soft/accttools/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/nvcc...not found Checking for program /home/pwang/nvcc...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/nvcc...not found Checking for program /soft/perftools/darshan/darshan/bin/nvcc...not found Checking for program /soft/compilers/wrappers/xl/nvcc...not found Checking for program /home/pwang/bin/nvcc...not found Checking for program /soft/environment/softenv-1.6.2/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/X11R6/bin/nvcc...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/nvcc...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/nvcc...not found Checking for program /soft/debuggers/scripts/bin/nvcc...not found Checking for program /soft/accttools/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/nvcc...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/nvcc...not found Checking for program /home/pwang/nvcc...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:612) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:612) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:715) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:715) Locate a functional Cxx compiler sh: mpicxx --help Executing: mpicxx --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to sh: mpicxx --help Executing: mpicxx --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to Checking for program /soft/perftools/darshan/darshan/bin/mpicxx...not found Checking for program /soft/compilers/wrappers/xl/mpicxx...found Defined make macro "CXX" to "mpicxx" Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:753) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:753) Locate a functional Cxx preprocessor Checking for program /soft/perftools/darshan/darshan/bin/mpicxx...not found Checking for program /soft/compilers/wrappers/xl/mpicxx...found Defined make macro "CXXCPP" to "mpicxx -E" Pushing language Cxx sh: mpicxx -E -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -E -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: #line 5 "/tmp/petsc-lj0zFz/config.setCompilers/conffix.h" extern "C" { } #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/include/c++/4.4.6/cstdlib" #pragma GCC system_header #line 212 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/include/c++/4.4.6/powerpc64-bgq-linux/bits/c++config.h" namespace std { inline namespace __gnu_cxx_ldbl128 { } } #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/include/c++/4.4.6/cstddef" #pragma GCC system_header #line 149 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef long ptrdiff_t; #line 211 typedef unsigned long size_t; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/include/c++/4.4.6/cstddef" namespace std __attribute__ ((__visibility__ ("default"))) { using ::ptrdiff_t; using ::size_t; } #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" extern "C" { #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 56 typedef __ino64_t ino64_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 94 typedef __off64_t off64_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 137 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __useconds_t useconds_t; #line 141 typedef __suseconds_t suseconds_t; #line 151 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef long int __fd_mask; #line 67 typedef struct { #line 72 __fd_mask fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 99 extern "C" { #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 128 } #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) throw (); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) throw (); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw (); #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 263 typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 274 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" } #line 21 "/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/include/stdlib.h" extern "C" { extern int abs(int) throw () __attribute__((__IBMBuiltin__)); extern long labs(long) throw () __attribute__((__IBMBuiltin__)); #line 26 extern long long llabs(long long) throw () __attribute__((__IBMBuiltin__)); #line 33 }; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern "C" { #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 98 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) throw () ; #line 145 extern double atof (__const char *__nptr) throw () __attribute__ ((__pure__)) ; extern int atoi (__const char *__nptr) throw () __attribute__ ((__pure__)) ; extern long int atol (__const char *__nptr) throw () __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (__const char *__nptr) throw () __attribute__ ((__pure__)) ; #line 165 extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) throw () ; #line 173 extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) throw () ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) throw () ; #line 184 extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; #line 195 __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; #line 209 __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 240 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int strtol_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () ; extern unsigned long int strtoul_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () ; __extension__ extern long long int strtoll_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () ; __extension__ extern unsigned long long int strtoull_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () ; extern double strtod_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () ; extern float strtof_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () ; extern long double strtold_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () ; #line 311 extern char *l64a (long int __n) throw () ; #line 314 extern long int a64l (__const char *__s) throw () __attribute__ ((__pure__)) ; #line 327 extern long int random (void) throw (); #line 330 extern void srandom (unsigned int __seed) throw (); #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) throw () ; #line 341 extern char *setstate (char *__statebuf) throw () ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) throw () ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) throw () ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) throw () ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) throw () ; #line 380 extern int rand (void) throw (); extern void srand (unsigned int __seed) throw (); #line 387 extern int rand_r (unsigned int *__seed) throw (); #line 395 extern double drand48 (void) throw (); extern double erand48 (unsigned short int __xsubi[3]) throw () ; #line 399 extern long int lrand48 (void) throw (); extern long int nrand48 (unsigned short int __xsubi[3]) throw () ; #line 404 extern long int mrand48 (void) throw (); extern long int jrand48 (unsigned short int __xsubi[3]) throw () ; #line 409 extern void srand48 (long int __seedval) throw (); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) throw () ; extern void lcong48 (unsigned short int __param[7]) throw () ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) throw () ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) throw () ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) throw () ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) throw () ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) throw () ; #line 471 extern void *malloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) throw () __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) throw () __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) throw (); #line 493 extern void cfree (void *__ptr) throw (); #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern "C" { #line 33 extern void *alloca (size_t __size) throw (); #line 39 } #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) throw () __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) throw () ; #line 514 extern void abort (void) throw () __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) throw () ; #line 525 extern "C++" int at_quick_exit (void (*__func) (void)) throw () __asm ("at_quick_exit") ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) throw () ; #line 544 extern void exit (int __status) throw () __attribute__ ((__noreturn__)); #line 552 extern void quick_exit (int __status) throw () __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) throw () __attribute__ ((__noreturn__)); #line 567 extern char *getenv (__const char *__name) throw () ; #line 572 extern char *__secure_getenv (__const char *__name) throw () ; #line 579 extern int putenv (char *__string) throw () ; #line 585 extern int setenv (__const char *__name, __const char *__value, int __replace) throw () ; #line 589 extern int unsetenv (__const char *__name) throw () ; #line 596 extern int clearenv (void) throw (); #line 606 extern char *mktemp (char *__template) throw () ; #line 620 extern int mkstemp (char *__template) ; #line 630 extern int mkstemp64 (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 652 extern int mkstemps64 (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) throw () ; #line 674 extern int mkostemp (char *__template, int __flags) ; #line 684 extern int mkostemp64 (char *__template, int __flags) ; #line 694 extern int mkostemps (char *__template, int __suffixlen, int __flags) ; #line 706 extern int mkostemps64 (char *__template, int __suffixlen, int __flags) ; #line 717 extern int system (__const char *__command) ; #line 724 extern char *canonicalize_file_name (__const char *__name) throw () ; #line 734 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) throw () ; #line 742 typedef int (*__compar_fn_t) (__const void *, __const void *); #line 745 typedef __compar_fn_t comparison_fn_t; #line 749 typedef int (*__compar_d_fn_t) (__const void *, __const void *, void *); #line 755 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort_r (void *__base, size_t __nmemb, size_t __size, __compar_d_fn_t __compar, void *__arg) ; #line 771 extern int abs (int __x) throw () __attribute__ ((__const__)) ; extern long int labs (long int __x) throw () __attribute__ ((__const__)) ; #line 776 __extension__ extern long long int llabs (long long int __x) throw () __attribute__ ((__const__)) ; #line 785 extern div_t div (int __numer, int __denom) throw () __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) throw () __attribute__ ((__const__)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) throw () __attribute__ ((__const__)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) throw () ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) throw () ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () ; #line 860 extern int mblen (__const char *__s, size_t __n) throw () ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) throw () ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) throw () ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) throw (); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) throw (); #line 885 extern int rpmatch (__const char *__response) throw () ; #line 896 extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) throw () ; #line 905 extern void setkey (__const char *__key) throw () ; #line 913 extern int posix_openpt (int __oflag) ; #line 921 extern int grantpt (int __fd) throw (); #line 925 extern int unlockpt (int __fd) throw (); #line 930 extern char *ptsname (int __fd) throw () ; #line 937 extern int ptsname_r (int __fd, char *__buf, size_t __buflen) throw () ; #line 941 extern int getpt (void); #line 948 extern int getloadavg (double __loadavg[], int __nelem) throw () ; #line 964 } #line 100 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/include/c++/4.4.6/cstdlib" namespace std __attribute__ ((__visibility__ ("default"))) { using ::div_t; using ::ldiv_t; using ::abort; using ::abs; using ::atexit; using ::atof; using ::atoi; using ::atol; using ::bsearch; using ::calloc; using ::div; using ::exit; using ::free; using ::getenv; using ::labs; using ::ldiv; using ::malloc; using ::mblen; using ::mbstowcs; using ::mbtowc; using ::qsort; using ::rand; using ::realloc; using ::srand; using ::strtod; using ::strtol; using ::strtoul; using ::system; using ::wcstombs; using ::wctomb; #line 138 inline long abs(long __i) { return labs(__i); } inline ldiv_t div(long __i, long __j) { return ldiv(__i, __j); } } #line 157 namespace __gnu_cxx __attribute__ ((__visibility__ ("default"))) { #line 160 using ::lldiv_t; #line 166 using ::_Exit; #line 169 inline long long abs(long long __x) { return __x >= 0 ? __x : -__x; } #line 173 using ::llabs; inline lldiv_t div(long long __n, long long __d) { lldiv_t __q; __q.quot = __n / __d; __q.rem = __n % __d; return __q; } using ::lldiv; #line 190 using ::atoll; using ::strtoll; using ::strtoull; using ::strtof; using ::strtold; } namespace std __attribute__ ((__visibility__ ("default"))) { #line 202 using ::__gnu_cxx::lldiv_t; using ::__gnu_cxx::_Exit; using ::__gnu_cxx::abs; using ::__gnu_cxx::llabs; using ::__gnu_cxx::div; using ::__gnu_cxx::lldiv; using ::__gnu_cxx::atoll; using ::__gnu_cxx::strtof; using ::__gnu_cxx::strtoll; using ::__gnu_cxx::strtoull; using ::__gnu_cxx::strtold; } Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:862) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:862) Locate a functional Fortran compiler sh: mpif90 --help Executing: mpif90 --help sh: Usage: ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to sh: mpif90 --help Executing: mpif90 --help sh: Usage: ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to Checking for program /soft/perftools/darshan/darshan/bin/mpif90...not found Checking for program /soft/compilers/wrappers/xl/mpif90...found Defined make macro "FC" to "mpif90" Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:881) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:881) Make sure fortran comment "!" works Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:944) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:944) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:975) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:975) ================================================================================ TEST checkArchiver from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1074) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1074) Check that the archiver exists and can make a library usable by the compiler Pushing language C sh: ar -V Executing: ar -V sh: GNU ar version 2.20.51.0.2-5.36.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar version 2.20.51.0.2-5.36.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /soft/perftools/darshan/darshan/bin/ar...not found Checking for program /soft/compilers/wrappers/xl/ar...not found Checking for program /home/pwang/bin/ar...not found Checking for program /soft/environment/softenv-1.6.2/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /soft/perftools/darshan/darshan/bin/ranlib...not found Checking for program /soft/compilers/wrappers/xl/ranlib...not found Checking for program /home/pwang/bin/ranlib...not found Checking for program /soft/environment/softenv-1.6.2/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" sh: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a /tmp/petsc-lj0zFz/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a /tmp/petsc-lj0zFz/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib -c /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib -c /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a sh: Possible ERROR while running ranlib: ret = 256 error message = {/usr/bin/ranlib: '-c': No such file } Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. sh: ar -V Executing: ar -V sh: GNU ar version 2.20.51.0.2-5.36.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar version 2.20.51.0.2-5.36.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /soft/perftools/darshan/darshan/bin/ar...not found Checking for program /soft/compilers/wrappers/xl/ar...not found Checking for program /home/pwang/bin/ar...not found Checking for program /soft/environment/softenv-1.6.2/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /soft/perftools/darshan/darshan/bin/ranlib...not found Checking for program /soft/compilers/wrappers/xl/ranlib...not found Checking for program /home/pwang/bin/ranlib...not found Checking for program /soft/environment/softenv-1.6.2/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" sh: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a /tmp/petsc-lj0zFz/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a /tmp/petsc-lj0zFz/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib /tmp/petsc-lj0zFz/config.setCompilers/libconf1.a sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/tmp/petsc-lj0zFz/config.setCompilers -lconf1 Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/tmp/petsc-lj0zFz/config.setCompilers -lconf1 sh: Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1189) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1189) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C sh: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconftest.a /tmp/petsc-lj0zFz/config.setCompilers/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.setCompilers/libconftest.a Executing: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.setCompilers/libconftest.a /tmp/petsc-lj0zFz/config.setCompilers/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.setCompilers/libconftest.a sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/tmp/petsc-lj0zFz/config.setCompilers -lconftest Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/tmp/petsc-lj0zFz/config.setCompilers -lconftest sh: Using shared linker /usr/bin/ar with flags [] and library extension a sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1267) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1267) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C sh: uname -s Executing: uname -s sh: Linux sh: mpicc -flags Executing: mpicc -flags sh: Trying C linker flag -Wl,-rpath, sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Valid C linker flag -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 Popping language C Pushing language Cxx sh: uname -s Executing: uname -s sh: Linux sh: mpicc -flags Executing: mpicc -flags sh: Trying Cxx linker flag -Wl,-rpath, sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Valid Cxx linker flag -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 Popping language Cxx Pushing language FC sh: uname -s Executing: uname -s sh: Linux sh: mpicc -flags Executing: mpicc -flags sh: Trying FC linker flag -Wl,-rpath, sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 /tmp/petsc-lj0zFz/config.setCompilers/conftest.o sh: Valid FC linker flag -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1302) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1302) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1351) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1351) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /tmp/petsc-lj0zFz/config.headers sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 57 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; #line 61 extern int dlclose (void *__handle) ; #line 65 extern void *dlsym (void *__restrict __handle, const char *__restrict __name) ; #line 72 extern int dladdrrange(void *handle, void **addrp, int *sizep); #line 89 extern char *dlerror (void) ; Defined "HAVE_DLFCN_H" to "1" Checking for function dlopen in library ['dl'] [] Pushing language C All intermediate test results are stored in /tmp/petsc-lj0zFz/config.libraries sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); int main() { dlopen() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); int main() { dlopen() ; return 0; } Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlsym in library ['dl'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlsym(); int main() { dlsym() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl sh: Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlclose in library ['dl'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlclose(); int main() { dlclose() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest /tmp/petsc-lj0zFz/config.libraries/conftest.o -ldl sh: Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS sh: uname -s Executing: uname -s sh: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: /usr/bin/ar -o /tmp/petsc-lj0zFz/config.setCompilers/libconftest.so /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Executing: /usr/bin/ar -o /tmp/petsc-lj0zFz/config.setCompilers/libconftest.so /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: /usr/bin/ar: no operation specified output: ret = 256 error message = {/usr/bin/ar: no operation specified } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Checking dynamic linker mpicc using flags ['-shared'] Checking for program /soft/perftools/darshan/darshan/bin/mpicc...not found Checking for program /soft/compilers/wrappers/xl/mpicc...found Defined make macro "DYNAMICLINKER" to "mpicc" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -shared /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -shared /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: nm: /tmp/tmp.pnMQHtogVV: no symbols output: error message = {nm: /tmp/tmp.pnMQHtogVV: no symbols } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -shared /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid C linker flag -shared sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/libconftest.so -shared /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/libconftest.so -shared /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o:(.rodata+0x8): undefined reference to `main' output: ret = 256 error message = {/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o:(.rodata+0x8): undefined reference to `main' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Unable to find working dynamic linker ================================================================================ TEST output from config.setCompilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/setCompilers.py:1397) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1397) Output module data as defines and substitutions Substituting "CC" with "mpicc" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpicc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpicxx" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpicxx -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpif90" Substituting "FFLAGS" with "" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilerFlags.py:65) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:65) Get the default compiler flags Pushing language C sh: mpicc --version Executing: mpicc --version sh: GNU ld (GNU Binutils) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) a later version. This program has absolutely no warranty. getCompilerVersion: mpicc GNU ld (GNU Binutils) 2.21.1 sh: mpicc -show Executing: mpicc -show sh: bgxlc_r -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlc_r --help Executing: bgxlc_r --help sh: sh: bgxlc_r --help Executing: bgxlc_r --help sh: sh: bgxlc_r --help Executing: bgxlc_r --help sh: sh: mpicc -show Executing: mpicc -show sh: bgxlc_r -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlc_r --help Executing: bgxlc_r --help sh: sh: bgxlc_r --help Executing: bgxlc_r --help sh: sh: bgxlc_r --help Executing: bgxlc_r --help sh: Trying C compiler flag -O sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -O Popping language C Pushing language Cxx sh: mpicxx --version Executing: mpicxx --version sh: GNU ld (GNU Binutils) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) a later version. This program has absolutely no warranty. getCompilerVersion: mpicxx GNU ld (GNU Binutils) 2.21.1 sh: mpicxx -show Executing: mpicxx -show sh: bgxlC_r -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpichcxx-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlC_r --help Executing: bgxlC_r --help sh: sh: bgxlC_r --help Executing: bgxlC_r --help sh: Trying Cxx compiler flag -qrtti=dyna sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -qrtti=dyna sh: mpicxx -show Executing: mpicxx -show sh: bgxlC_r -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpichcxx-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlC_r --help Executing: bgxlC_r --help sh: sh: bgxlC_r --help Executing: bgxlC_r --help sh: Trying Cxx compiler flag -O sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -O Popping language Cxx Pushing language FC sh: mpif90 --version Executing: mpif90 --version sh: GNU ld (GNU Binutils) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) a later version. This program has absolutely no warranty. getCompilerVersion: mpif90 GNU ld (GNU Binutils) 2.21.1 sh: mpif90 -show Executing: mpif90 -show sh: bgxlf90_r -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include/xl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlf90_r --help Executing: bgxlf90_r --help sh: sh: bgxlf90_r --help Executing: bgxlf90_r --help sh: sh: mpif90 -show Executing: mpif90 -show sh: bgxlf90_r -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include/xl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread sh: bgxlf90_r --help Executing: bgxlf90_r --help sh: sh: bgxlf90_r --help Executing: bgxlf90_r --help sh: Trying FC compiler flag -O sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Added FC compiler flag -O Popping language FC ================================================================================ TEST configureDebugging from PETSc.utilities.debugging(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/debugging.py:25) TESTING: configureDebugging from PETSc.utilities.debugging(config/PETSc/utilities/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" =============================================================================== WARNING! Compiling PETSc with no debugging, this should only be done for timing and production runs. All development should be done when configured using --with-debugging=1 =============================================================================== ================================================================================ TEST configureArchitecture from PETSc.utilities.arch(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/arch.py:32) TESTING: configureArchitecture from PETSc.utilities.arch(config/PETSc/utilities/arch.py:32) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""arch-linux2-c-opt"" ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/sharedLibraries.py:42) TESTING: checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:42) ================================================================================ TEST configureSharedLibraries from PETSc.utilities.sharedLibraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/sharedLibraries.py:63) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:63) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.utilities.sharedLibraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/sharedLibraries.py:102) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:102) Checks whether dynamic loading should be used, for which you must - Specify --with-dynamic-loading - Have found a working dynamic linker (with dlfcn.h and libdl) Defines PETSC_USE_DYNAMIC_LIBRARIES if they are used Dynamic loading - disabled ================================================================================ TEST configureBmakeDir from PETSc.utilities.bmakeDir(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/bmakeDir.py:26) TESTING: configureBmakeDir from PETSc.utilities.bmakeDir(config/PETSc/utilities/bmakeDir.py:26) Makes $PETSC_ARCH and subdirectories if it does not exist Changed persistence directory to arch-linux2-c-opt/conf sh: mpicc --help Executing: mpicc --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to ================================================================================ TEST checkRestrict from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /tmp/petsc-lj0zFz/config.compilers sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } compilers: Set C restrict keyword to restrict Defined "C_RESTRICT" to "restrict" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:306) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:306) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:105) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:105) Check for C keyword: static inline Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:317) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:317) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ================================================================================ TEST checkCLibraries from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:161) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:161) Determines the libraries needed to link with C Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -ldl sh: mpicc for MPICH2 version 1.5 exec: export(export,XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlc_r,NULL) exec: export(export,XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446,NULL) exec: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld,--eh-frame-hdr,-Qy,-melf64ppc,-static,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o,-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64,-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64,-R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib,-o,/tmp/petsc-lj0zFz/config.compilers/conftest,/tmp/petsc-lj0zFz/config.compilers/conftest.o,-ldl,-lmpich-xl,-lopa-xl,-lmpl-xl,-lpami-gcc,-lSPI,-lSPI_cnk,-lrt,-lpthread,-lstdc++,-lpthread,-lxlopt,-lxl,-ldl,-lpthread,-lgcc,-lm,--start-group,-lc,-lnss_files,-lnss_dns,-lresolv,--end-group,-lgcc,-lgcc_eh,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o,NULL) unlink: /tmp/xlcW0Efqvgj unlink: /tmp/xlcW1K01fts unlink: /tmp/xlcW2ugFeGB Popping language C compilers: Checking arg mpicc compilers: Unknown arg mpicc compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH2 compilers: Unknown arg MPICH2 compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 1.5 compilers: Unknown arg 1.5 compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlc_r compilers: Unknown arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlc_r compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446 compilers: Unknown arg XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446 compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld compilers: Unknown arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -melf64ppc compilers: Unknown arg -melf64ppc compilers: Checking arg -static compilers: Unknown arg -static compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Checking arg -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Found -R library: /soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -lmpich-xl compilers: Found library : -lmpich-xl compilers: Checking arg -lopa-xl compilers: Found library : -lopa-xl compilers: Checking arg -lmpl-xl compilers: Found library : -lmpl-xl compilers: Checking arg -lpami-gcc compilers: Found library : -lpami-gcc compilers: Checking arg -lSPI compilers: Found library : -lSPI compilers: Checking arg -lSPI_cnk compilers: Found library : -lSPI_cnk compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lpthread compilers: Found library : -lpthread compilers: Checking arg -lstdc++ compilers: Found library : -lstdc++ compilers: Checking arg -lpthread compilers: Checking arg -lxlopt compilers: Found library : -lxlopt compilers: Checking arg -lxl compilers: Found library : -lxl compilers: Checking arg -ldl compilers: Checking arg -lpthread compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lm compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lnss_files compilers: Found library : -lnss_files compilers: Checking arg -lnss_dns compilers: Found library : -lnss_dns compilers: Checking arg -lresolv compilers: Found library : -lresolv compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_eh compilers: Found library : -lgcc_eh compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW0Efqvgj compilers: Unknown arg /tmp/xlcW0Efqvgj compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW1K01fts compilers: Unknown arg /tmp/xlcW1K01fts compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW2ugFeGB compilers: Unknown arg /tmp/xlcW2ugFeGB compilers: Libraries needed to link C code with another linker: ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-ldl', '-lmpich-xl', '-lopa-xl', '-lmpl-xl', '-lpami-gcc', '-lSPI', '-lSPI_cnk', '-lrt', '-lpthread', '-lstdc++', '-lxlopt', '-lxl', '-lnss_files', '-lnss_dns', '-lresolv', '-lgcc_eh'] compilers: Check that C libraries can be used from Fortran Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1278) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1278) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-208 (S) command option D is missing a subargument output: ret = 10240 error message = {/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-208 (S) command option D is missing a subargument } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -MMD due to nonzero status from link Rejected C compiler flag -MMD because linker cannot handle it Trying C compiler flag -M sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Valid C linker flag -M Testing C compiler flag -M sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -M /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -M /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/.orig/bgxlC_r: 1501-208 (S) command option D is missing a subargument output: ret = 10240 error message = {/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/.orig/bgxlC_r: 1501-208 (S) command option D is missing a subargument } Pushing language CXX Popping language CXX in mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -MMD due to nonzero status from link Rejected Cxx compiler flag -MMD because linker cannot handle it Trying Cxx compiler flag -M sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Valid Cxx linker flag -M Testing Cxx compiler flag -M sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O -M /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -qrtti=dyna -O -M /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language Cxx Pushing language FC Trying FC compiler flag -MMD sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored output: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -MMD -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: program main end Rejecting FC linker flag -MMD due to /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored Rejected FC compiler flag -MMD because linker cannot handle it Trying FC compiler flag -M sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored output: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -M -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: program main end Rejecting FC linker flag -M due to /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored Rejected FC compiler flag -M because linker cannot handle it Popping language FC sh: mpicxx --help Executing: mpicxx --help sh: Usage: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld [options] file... Options: -a KEYWORD Shared library control for HP/UX compatibility -A ARCH, --architecture ARCH Set architecture -b TARGET, --format TARGET Specify target for following input files -c FILE, --mri-script FILE Read MRI format linker script -d, -dc, -dp Force common symbols to be defined -e ADDRESS, --entry ADDRESS Set start address -E, --export-dynamic Export all dynamic symbols --no-export-dynamic Undo the effect of --export-dynamic -EB Link big-endian objects -EL Link little-endian objects -f SHLIB, --auxiliary SHLIB Auxiliary filter for shared object symbol table -F SHLIB, --filter SHLIB Filter for shared object symbol table -g Ignored -G SIZE, --gpsize SIZE Small data size (if no size, same as --shared) -h FILENAME, -soname FILENAME Set internal name of shared library -I PROGRAM, --dynamic-linker PROGRAM Set PROGRAM as the dynamic linker to use -l LIBNAME, --library LIBNAME Search for library LIBNAME -L DIRECTORY, --library-path DIRECTORY Add DIRECTORY to library search path --sysroot= Override the default sysroot location -m EMULATION Set emulation -M, --print-map Print map file on standard output -n, --nmagic Do not page align data -N, --omagic Do not page align data, do not make text readonly --no-omagic Page align data, make text readonly -o FILE, --output FILE Set output file name -O Optimize output file -plugin PLUGIN Load named plugin -plugin-opt ARG Send arg to last-loaded plugin -flto Ignored for GCC LTO option compatibility -flto-partition= Ignored for GCC LTO option compatibility -Qy Ignored for SVR4 compatibility -q, --emit-relocs Generate relocations in final output -r, -i, --relocatable Generate relocatable output -R FILE, --just-symbols FILE Just link symbols (if directory, same as --rpath) -s, --strip-all Strip all symbols -S, --strip-debug Strip debugging symbols --strip-discarded Strip symbols in discarded sections --no-strip-discarded Do not strip symbols in discarded sections -t, --trace Trace file opens -T FILE, --script FILE Read linker script --default-script FILE, -dT Read default linker script -u SYMBOL, --undefined SYMBOL Start with undefined reference to SYMBOL --unique [=SECTION] Don't merge input [SECTION | orphan] sections -Ur Build global constructor/destructor tables -v, --version Print version information -V Print version and emulation information -x, --discard-all Discard all local symbols -X, --discard-locals Discard temporary local symbols (default) --discard-none Don't discard any local symbols -y SYMBOL, --trace-symbol SYMBOL Trace mentions of SYMBOL -Y PATH Default search path for Solaris compatibility -(, --start-group Start a group -), --end-group End a group --accept-unknown-input-arch Accept input files whose architecture cannot be determined --no-accept-unknown-input-arch Reject input files whose architecture is unknown --as-needed Only set DT_NEEDED for following dynamic libs if used --no-as-needed Always set DT_NEEDED for dynamic libraries mentioned on the command line -assert KEYWORD Ignored for SunOS compatibility -Bdynamic, -dy, -call_shared Link against shared libraries -Bstatic, -dn, -non_shared, -static Do not link against shared libraries -Bsymbolic Bind global references locally -Bsymbolic-functions Bind global function references locally --check-sections Check section addresses for overlaps (default) --no-check-sections Do not check section addresses for overlaps --copy-dt-needed-entries Copy DT_NEEDED links mentioned inside DSOs that follow --no-copy-dt-needed-entries Do not copy DT_NEEDED links mentioned inside DSOs that follow --cref Output cross reference table --defsym SYMBOL=EXPRESSION Define a symbol --demangle [=STYLE] Demangle symbol names [using STYLE] --embedded-relocs Generate embedded relocs --fatal-warnings Treat warnings as errors --no-fatal-warnings Do not treat warnings as errors (default) -fini SYMBOL Call SYMBOL at unload-time --force-exe-suffix Force generation of file with .exe suffix --gc-sections Remove unused sections (on some targets) --no-gc-sections Don't remove unused sections (default) --print-gc-sections List removed unused sections on stderr --no-print-gc-sections Do not list removed unused sections --hash-size= Set default hash table size close to --help Print option help -init SYMBOL Call SYMBOL at load-time -Map FILE Write a map file --no-define-common Do not define Common storage --no-demangle Do not demangle symbol names --no-keep-memory Use less memory and more disk I/O --no-undefined Do not allow unresolved references in object files --allow-shlib-undefined Allow unresolved references in shared libaries --no-allow-shlib-undefined Do not allow unresolved references in shared libs --allow-multiple-definition Allow multiple definitions --no-undefined-version Disallow undefined version --default-symver Create default symbol version --default-imported-symver Create default symbol version for imported symbols --no-warn-mismatch Don't warn about mismatched input files --no-warn-search-mismatch Don't warn on finding an incompatible library --no-whole-archive Turn off --whole-archive --noinhibit-exec Create an output file even if errors occur -nostdlib Only use library directories specified on the command line --oformat TARGET Specify target of output file -qmagic Ignored for Linux compatibility --reduce-memory-overheads Reduce memory overheads, possibly taking much longer --relax Reduce code size by using target specific optimizations --no-relax Do not use relaxation techniques to reduce code size --retain-symbols-file FILE Keep only symbols listed in FILE -rpath PATH Set runtime shared library search path -rpath-link PATH Set link time shared library search path -shared, -Bshareable Create a shared library -pie, --pic-executable Create a position independent executable --sort-common [=ascending|descending] Sort common symbols by alignment [in specified order] --sort-section name|alignment Sort sections by name or maximum alignment --spare-dynamic-tags COUNT How many tags to reserve in .dynamic section --split-by-file [=SIZE] Split output sections every SIZE octets --split-by-reloc [=COUNT] Split output sections every COUNT relocs --stats Print memory usage statistics --target-help Display target specific options --task-link SYMBOL Do task level linking --traditional-format Use same format as native linker --section-start SECTION=ADDRESS Set address of named section -Tbss ADDRESS Set address of .bss section -Tdata ADDRESS Set address of .data section -Ttext ADDRESS Set address of .text section -Ttext-segment ADDRESS Set address of text segment --unresolved-symbols= How to handle unresolved symbols. is: ignore-all, report-all, ignore-in-object-files, ignore-in-shared-libs --verbose [=NUMBER] Output lots of information during link --version-script FILE Read version information script --version-exports-section SYMBOL Take export symbols list from .exports, using SYMBOL as the version. --dynamic-list-data Add data symbols to dynamic list --dynamic-list-cpp-new Use C++ operator new/delete dynamic list --dynamic-list-cpp-typeinfo Use C++ typeinfo dynamic list --dynamic-list FILE Read dynamic list --warn-common Warn about duplicate common symbols --warn-constructors Warn if global constructors/destructors are seen --warn-multiple-gp Warn if the multiple GP values are used --warn-once Warn only once per undefined symbol --warn-section-align Warn if start of section changes due to alignment --warn-shared-textrel Warn if shared object has DT_TEXTREL --warn-alternate-em Warn if an object has alternate ELF machine code --warn-unresolved-symbols Report unresolved symbols as warnings --error-unresolved-symbols Report unresolved symbols as errors --whole-archive Include all objects from following archives --wrap SYMBOL Use wrapper functions for SYMBOL @FILE Read options from FILE /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported targets: elf64-powerpc elf64-powerpcle elf32-powerpc elf32-powerpcle aixcoff-rs6000 aixcoff64-rs6000 aix5coff64-rs6000 elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: supported emulations: elf64ppc elf32ppclinux elf32ppc elf32ppcsim /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: emulation specific options: elf64ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --stub-group-size=N Maximum size of a group of input sections that can be handled by one stub section. A negative value locates all stubs before their branches (with a group size of -N), while a positive value allows two groups of input sections, one before, and one after each stub section. Values of +/-1 indicate the linker should choose suitable defaults. --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --dotsyms For every version pattern "foo" in a version script, add ".foo" so that function code symbols are treated the same as function descriptor symbols. Defaults to on. --no-dotsyms Don't do anything special in version scripts. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --no-opd-optimize Don't optimize the OPD section. --no-toc-optimize Don't optimize the TOC section. --no-multi-toc Disallow automatic multiple toc sections. --no-toc-sort Don't sort TOC and GOT sections. --non-overlapping-opd Canonicalize .opd, so that there are no overlapping .opd entries. elf32ppclinux: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppc: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. elf32ppcsim: --build-id[=STYLE] Generate build ID note --audit=AUDITLIB Specify a library to use for auditing -P AUDITLIB, --depaudit=AUDITLIB Specify a library to use for auditing dependencies -Bgroup Selects group name lookup rules for DSO --disable-new-dtags Disable new dynamic tags --enable-new-dtags Enable new dynamic tags --eh-frame-hdr Create .eh_frame_hdr section --hash-style=STYLE Set hash style to sysv, gnu or both -z combreloc Merge dynamic relocs into one section and sort -z defs Report unresolved symbols in object files. -z execstack Mark executable as requiring executable stack -z initfirst Mark DSO to be initialized first at runtime -z interpose Mark object to interpose all DSOs but executable -z lazy Mark object lazy runtime binding (default) -z loadfltr Mark object requiring immediate process -z muldefs Allow multiple definitions -z nocombreloc Don't merge dynamic relocs into one section -z nocopyreloc Don't create copy relocs -z nodefaultlib Mark object not to use default search paths -z nodelete Mark DSO non-deletable at runtime -z nodlopen Mark DSO not available to dlopen -z nodump Mark DSO not available to dldump -z noexecstack Mark executable as not requiring executable stack -z norelro Don't create RELRO program header -z now Mark object non-lazy runtime binding -z origin Mark object requiring immediate $ORIGIN processing at runtime -z relro Create RELRO program header -z max-page-size=SIZE Set maximum page size to SIZE -z common-page-size=SIZE Set common page size to SIZE -z KEYWORD Ignored for Solaris compatibility --emit-stub-syms Label linker stubs with a symbol. --no-emit-stub-syms Don't label linker stubs with a symbol. --no-tls-optimize Don't try to optimize TLS accesses. --no-tls-get-addr-optimize Don't use a special __tls_get_addr call. --secure-plt Use new-style PLT if possible. --bss-plt Force old-style BSS PLT. --sdata-got Force GOT location just before .sdata. Report bugs to ================================================================================ TEST checkRestrict from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } compilers: Set Cxx restrict keyword to restrict Defined "CXX_RESTRICT" to "restrict" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:355) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:355) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:330) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:330) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {1506-173 (W) Option rtti=dyna is not valid. "/tmp/petsc-lj0zFz/config.setCompilers/conftest.c", line 5.7: 1506-277 (S) Syntax error: possible missing ';' or ','? } Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to 1506-173 (W) Option rtti=dyna is not valid. "/tmp/petsc-lj0zFz/config.setCompilers/conftest.c", line 5.7: 1506-277 (S) Syntax error: possible missing ';' or ','? PETSc Error: No output file produced sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag -+ Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:119) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:119) Check for C++ keyword: static inline Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:370) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:370) Determines the libraries needed to link with C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: mpicxx for MPICH2 version 1.5 exec: export(export,XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlC_r,NULL) exec: export(export,XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446,NULL) exec: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld,--eh-frame-hdr,-Qy,-melf64ppc,-static,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64,-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o,-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64,-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64,-R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib,-o,/tmp/petsc-lj0zFz/config.compilers/conftest,/tmp/petsc-lj0zFz/config.compilers/conftest.o,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64,-ldl,-lmpich-xl,-lopa-xl,-lmpl-xl,-lpami-gcc,-lSPI,-lSPI_cnk,-lrt,-lpthread,-lstdc++,-lxlopt,-lxl,-lnss_files,-lnss_dns,-lresolv,-lgcc_eh,-ldl,-lmpichcxx-xl,-lmpich-xl,-lopa-xl,-lmpl-xl,-lpami-gcc,-lSPI,-lSPI_cnk,-lrt,-lpthread,-lstdc++,-lpthread,-lxlopt,-lxl,-libmc++,-lxlopt,-lxl,-lstdc++,-lm,-ldl,-lpthread,-lgcc,-lm,--start-group,-lc,-lnss_files,-lnss_dns,-lresolv,--end-group,-lgcc,-lgcc_eh,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o,NULL) unlink: /tmp/xlcW0D0J0dd unlink: /tmp/xlcW1U28Ghg unlink: /tmp/xlcW21nKLlj Popping language Cxx compilers: Checking arg mpicxx compilers: Unknown arg mpicxx compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH2 compilers: Unknown arg MPICH2 compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 1.5 compilers: Unknown arg 1.5 compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlC_r compilers: Unknown arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/etc/vac.cfg.rhel6.5.gcc447:bgxlC_r compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446 compilers: Unknown arg XLC_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/etc/V1R2M1.vac.cfg.rhel6.3.gcc446 compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld compilers: Unknown arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -melf64ppc compilers: Unknown arg -melf64ppc compilers: Checking arg -static compilers: Unknown arg -static compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Checking arg -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Found -R library: /soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -lmpich-xl compilers: Found library: -lmpich-xl Library already in C list so skipping in C++ compilers: Checking arg -lopa-xl compilers: Found library: -lopa-xl Library already in C list so skipping in C++ compilers: Checking arg -lmpl-xl compilers: Found library: -lmpl-xl Library already in C list so skipping in C++ compilers: Checking arg -lpami-gcc compilers: Found library: -lpami-gcc Library already in C list so skipping in C++ compilers: Checking arg -lSPI compilers: Found library: -lSPI Library already in C list so skipping in C++ compilers: Checking arg -lSPI_cnk compilers: Found library: -lSPI_cnk Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in C++ compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in C++ compilers: Checking arg -lxlopt compilers: Found library: -lxlopt Library already in C list so skipping in C++ compilers: Checking arg -lxl compilers: Found library: -lxl Library already in C list so skipping in C++ compilers: Checking arg -lnss_files compilers: Found library: -lnss_files Library already in C list so skipping in C++ compilers: Checking arg -lnss_dns compilers: Found library: -lnss_dns Library already in C list so skipping in C++ compilers: Checking arg -lresolv compilers: Found library: -lresolv Library already in C list so skipping in C++ compilers: Checking arg -lgcc_eh compilers: Found library: -lgcc_eh Library already in C list so skipping in C++ compilers: Checking arg -ldl compilers: Checking arg -lmpichcxx-xl compilers: Found library: -lmpichcxx-xl compilers: Checking arg -lmpich-xl compilers: Checking arg -lopa-xl compilers: Checking arg -lmpl-xl compilers: Checking arg -lpami-gcc compilers: Checking arg -lSPI compilers: Checking arg -lSPI_cnk compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lstdc++ compilers: Checking arg -lpthread compilers: Checking arg -lxlopt compilers: Checking arg -lxl compilers: Checking arg -libmc++ compilers: Found library: -libmc++ compilers: Checking arg -lxlopt compilers: Checking arg -lxl compilers: Checking arg -lstdc++ compilers: Checking arg -lm compilers: Checking arg -ldl compilers: Checking arg -lpthread compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lm compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lnss_files compilers: Checking arg -lnss_dns compilers: Checking arg -lresolv compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_eh compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW0D0J0dd compilers: Unknown arg /tmp/xlcW0D0J0dd compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW1U28Ghg compilers: Unknown arg /tmp/xlcW1U28Ghg compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/xlcW21nKLlj compilers: Unknown arg /tmp/xlcW21nKLlj compilers: Libraries needed to link Cxx code with another linker: ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichcxx-xl', '-libmc++'] compilers: Check that Cxx libraries can be used from C Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkFortranTypeSizes from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:528) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:528) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:587) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:587) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main call d1chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.compilers/conftest.o:(.text+0xc): undefined reference to `d1chk' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.compilers/conftest.o:(.text+0xc): undefined reference to `d1chk' } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: program main call d1chk() end Popping language FC Testing Fortran mangling type unchanged with code void d1chk(void){return;} Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk(void){return;} Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main call d1chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language FC compilers: Fortran name mangling is unchanged Defined "HAVE_FORTRAN_NOUNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:624) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:624) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main call d1_chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.compilers/conftest.o:(.text+0xc): undefined reference to `d1_chk' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.compilers/conftest.o:(.text+0xc): undefined reference to `d1_chk' } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: program main call d1_chk() end Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:634) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:634) Determine if Fortran handles preprocessing properly Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:655) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:655) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -DTesting /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -DTesting /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.setCompilers/conftest.F", line 5.12: 1515-019 (S) Syntax is incorrect. "/tmp/petsc-lj0zFz/config.setCompilers/conftest.F", 1520-031 (W) Option DLINES is ignored within Fortran 90 free form and IBM free form. ** main === End of Compilation 1 === 1501-511 Compilation failed for file conftest.F. } Source: program main #define dummy dummy #ifndef Testing fooey #endif end Rejecting compiler flag -DTesting due to nonzero status from link Rejecting compiler flag -DTesting due to "/tmp/petsc-lj0zFz/config.setCompilers/conftest.F", line 5.12: 1515-019 (S) Syntax is incorrect. "/tmp/petsc-lj0zFz/config.setCompilers/conftest.F", 1520-031 (W) Option DLINES is ignored within Fortran 90 free form and IBM free form. ** main === End of Compilation 1 === 1501-511 Compilation failed for file conftest.F. PETSc Error: No output file produced sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -WF,-DTesting /tmp/petsc-lj0zFz/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O -WF,-DTesting /tmp/petsc-lj0zFz/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main #define dummy dummy #ifndef Testing fooey #endif end Popping language FC compilers: Fortran uses -WF,-D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:671) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:671) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC sh: mpif90 -V Executing: mpif90 -V sh: export XL_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/xlf.cfg.rhel6.5.gcc447:bgxlf90_r export XLF_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/V1R2M1.xlf.cfg.rhel6.3.gcc446 /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld --eh-frame-hdr -Qy -melf64ppc -static -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread -lxlf90_r -lxlopt -lxlomp_ser -lxl -lxlfmath -ldl -lpthread -lm -lc -lgcc -lgcc_eh -ldl -lm --start-group -lc -lnss_files -lnss_dns -lresolv --end-group -lgcc -lgcc_eh -lgcc -ldl /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o | /bin/awk 'BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print $0;}else{a=1;if((s=="")&& $0 ~ /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 && s!=""){print s}}' rm /tmp/optf.10888949o7w rm /tmp/version.10888Ms8A4T sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -v -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: mpif90 for MPICH2 version 1.5 exec: export(export,XL_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/xlf.cfg.rhel6.5.gcc447:bgxlf90_r,NULL) exec: export(export,XLF_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/V1R2M1.xlf.cfg.rhel6.3.gcc446,NULL) exec: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(ld,--eh-frame-hdr,-Qy,-melf64ppc,-static,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/bgsys/drivers/V1R2M1/ppc64/spi/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64,-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib,-L/bgsys/drivers/V1R2M1/ppc64/comm/lib,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o,-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64,-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64,-R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc,-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib,-o,/tmp/petsc-lj0zFz/config.compilers/conftest,/tmp/petsc-lj0zFz/config.compilers/conftest.o,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64,-ldl,-lmpich-xl,-lopa-xl,-lmpl-xl,-lpami-gcc,-lSPI,-lSPI_cnk,-lrt,-lpthread,-lstdc++,-lxlopt,-lxl,-lnss_files,-lnss_dns,-lresolv,-lgcc_eh,-ldl,-lmpichf90-xl,-lmpich-xl,-lopa-xl,-lmpl-xl,-lpami-gcc,-lSPI,-lSPI_cnk,-lrt,-lpthread,-lstdc++,-lpthread,-lxlf90_r,-lxlopt,-lxlomp_ser,-lxl,-lxlfmath,-ldl,-lpthread,-lm,-lc,-lgcc,-lgcc_eh,-ldl,-lm,--start-group,-lc,-lnss_files,-lnss_dns,-lresolv,--end-group,-lgcc,-lgcc_eh,-lgcc,-ldl,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o,/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o,NULL) | exec: /bin/awk(/bin/awk,BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print $0;}else{a=1;if((s=="")&& $0 ~ /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 && s!=""){print s}},NULL) unlink: /tmp/optf.11138oHbhLN Popping language FC compilers: Checking arg mpif90 compilers: Unknown arg mpif90 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH2 compilers: Unknown arg MPICH2 compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 1.5 compilers: Unknown arg 1.5 compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/xlf.cfg.rhel6.5.gcc447:bgxlf90_r compilers: Unknown arg XL_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/xlf.cfg.rhel6.5.gcc447:bgxlf90_r compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg export(export compilers: Unknown arg export(export compilers: Checking arg XLF_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/V1R2M1.xlf.cfg.rhel6.3.gcc446 compilers: Unknown arg XLF_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/V1R2M1.xlf.cfg.rhel6.3.gcc446 compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(ld compilers: Unknown arg /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld(ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -melf64ppc compilers: Unknown arg -melf64ppc compilers: Checking arg -static compilers: Unknown arg -static compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Found library directory: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Found library directory: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Already in lflags so skipping: -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Already in lflags so skipping: -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 compilers: Checking arg -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 compilers: Found library directory: -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 compilers: Checking arg -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Found -R library: /soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc compilers: Checking arg -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib compilers: Already in lflags so skipping: -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest compilers: Checking arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-lj0zFz/config.compilers/conftest.o compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in Fortran compilers: Checking arg -lmpich-xl compilers: Found library: -lmpich-xl Library already in C list so skipping in Fortran compilers: Checking arg -lopa-xl compilers: Found library: -lopa-xl Library already in C list so skipping in Fortran compilers: Checking arg -lmpl-xl compilers: Found library: -lmpl-xl Library already in C list so skipping in Fortran compilers: Checking arg -lpami-gcc compilers: Found library: -lpami-gcc Library already in C list so skipping in Fortran compilers: Checking arg -lSPI compilers: Found library: -lSPI Library already in C list so skipping in Fortran compilers: Checking arg -lSPI_cnk compilers: Found library: -lSPI_cnk Library already in C list so skipping in Fortran compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in Fortran compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in Fortran compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in Fortran compilers: Checking arg -lxlopt compilers: Found library: -lxlopt Library already in C list so skipping in Fortran compilers: Checking arg -lxl compilers: Found library: -lxl Library already in C list so skipping in Fortran compilers: Checking arg -lnss_files compilers: Found library: -lnss_files Library already in C list so skipping in Fortran compilers: Checking arg -lnss_dns compilers: Found library: -lnss_dns Library already in C list so skipping in Fortran compilers: Checking arg -lresolv compilers: Found library: -lresolv Library already in C list so skipping in Fortran compilers: Checking arg -lgcc_eh compilers: Found library: -lgcc_eh Library already in C list so skipping in Fortran compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lmpichf90-xl compilers: Found library: -lmpichf90-xl compilers: Checking arg -lmpich-xl compilers: Already in lflags: -lmpich-xl compilers: Checking arg -lopa-xl compilers: Already in lflags: -lopa-xl compilers: Checking arg -lmpl-xl compilers: Already in lflags: -lmpl-xl compilers: Checking arg -lpami-gcc compilers: Already in lflags: -lpami-gcc compilers: Checking arg -lSPI compilers: Already in lflags: -lSPI compilers: Checking arg -lSPI_cnk compilers: Already in lflags: -lSPI_cnk compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lstdc++ compilers: Already in lflags: -lstdc++ compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lxlf90_r compilers: Found library: -lxlf90_r compilers: Checking arg -lxlopt compilers: Already in lflags: -lxlopt compilers: Checking arg -lxlomp_ser compilers: Found library: -lxlomp_ser compilers: Checking arg -lxl compilers: Already in lflags: -lxl compilers: Checking arg -lxlfmath compilers: Found library: -lxlfmath compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lc compilers: Found system library therefor skipping: -lc compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -lgcc_eh compilers: Already in lflags: -lgcc_eh compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lc compilers: Found system library therefor skipping: -lc compilers: Checking arg -lnss_files compilers: Already in lflags: -lnss_files compilers: Checking arg -lnss_dns compilers: Already in lflags: -lnss_dns compilers: Checking arg -lresolv compilers: Already in lflags: -lresolv compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -lgcc_eh compilers: Already in lflags: -lgcc_eh compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o compilers: Checking arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Unknown arg /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg | compilers: Unknown arg | compilers: Checking arg exec: compilers: Unknown arg exec: compilers: Checking arg /bin/awk(/bin/awk compilers: Unknown arg /bin/awk(/bin/awk compilers: Checking arg BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print compilers: Unknown arg BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print compilers: Checking arg $0;}else{a=1;if((s=="")&& compilers: Unknown arg $0;}else{a=1;if((s=="")&& compilers: Checking arg $0 compilers: Unknown arg $0 compilers: Checking arg ~ compilers: Unknown arg ~ compilers: Checking arg /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 compilers: Unknown arg /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 compilers: Checking arg && compilers: Unknown arg && compilers: Checking arg s!=""){print compilers: Unknown arg s!=""){print compilers: Checking arg s}} compilers: Unknown arg s}} compilers: Checking arg NULL) compilers: Unknown arg NULL) compilers: Checking arg unlink: compilers: Unknown arg unlink: compilers: Checking arg /tmp/optf.11138oHbhLN compilers: Unknown arg /tmp/optf.11138oHbhLN compilers: Libraries needed to link Fortran code with the C linker: ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -O /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.setCompilers/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.setCompilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: /tmp/petsc-lj0zFz/config.setCompilers/conftest Executing: /tmp/petsc-lj0zFz/config.setCompilers/conftest sh: Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1012) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1012) Check that Fortran can be linked against C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk(void); void foo(void){d1chk();} Popping language Cxx Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk(void); void d1chk(void){return;} Popping language Cxx Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main call d1chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/cxxobj.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/cxxobj.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh /tmp/petsc-lj0zFz/config.compilers/confc.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language FC compilers: Fortran can link C++ functions ================================================================================ TEST checkFortran90 from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1047) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1047) Determine whether the Fortran compiler handles F90 Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1060) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1060) Determine whether the Fortran compiler handles F2003 Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.compilers/conftest.F", line 9.25: 1516-169 (S) A variable that is specified as an argument to the intrinsic procedure C_LOC must either have type and type parameters that are interoperable with a C type, or be a nonpolymorphic, scalar variable with no length type parameters. ** main === End of Compilation 1 === 1501-511 Compilation failed for file conftest.F. } Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Compile failed inside link Fortran compiler does not support F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1080) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1080) Check for F90 array interfaces sh: uname -s Executing: uname -s sh: Linux Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); abort(); } return; } Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/fooobj.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/fooobj.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.compilers/conftest sh: /tmp/petsc-lj0zFz/config.compilers/conftest Executing: /tmp/petsc-lj0zFz/config.compilers/conftest sh: arrays [0xfffd8cbf038 0xfffd8cbf038 0xfffd8cbf038] arrays [0xfffd8cbef98 0xfffd8cbefe8 0xfffd8cbef98] pointers do not match! [0x103b0b4 0x1] [0x800000000200f032] ERROR while running executable: Could not execute "/tmp/petsc-lj0zFz/config.compilers/conftest": arrays [0xfffd8cbf038 0xfffd8cbf038 0xfffd8cbf038] arrays [0xfffd8cbef98 0xfffd8cbefe8 0xfffd8cbef98] pointers do not match! [0x103b0b4 0x1] [0x800000000200f032] Popping language FC compilers: F90 uses a single argument for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1167) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1167) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -I/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/configtest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.compilers/conftest -I/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.o /tmp/petsc-lj0zFz/config.compilers/configtest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1233) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1233) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -module /tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -module /tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-216 (W) command option -module is not recognized - passed to ld ** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -module:/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -module:/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-216 (W) command option -module:/tmp/petsc-lj0zFz/config.compilers/confdir is not recognized - passed to ld ** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -fmod=/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -fmod=/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -J/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -J/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-216 (W) command option -J/tmp/petsc-lj0zFz/config.compilers/confdir is not recognized - passed to ld ** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -M/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -M/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-214 (W) command option M reserved for future use - ignored /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-216 (W) command option -/tmp/petsc-lj0zFz/config.compilers/confdir is not recognized - passed to ld ** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -M failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -p/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -p/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/.orig/bgxlf90_r: 1501-216 (W) command option -/tmp/petsc-lj0zFz/config.compilers/confdir is not recognized - passed to ld ** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -p failed sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qmoddir=/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.compilers/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -qmoddir=/tmp/petsc-lj0zFz/config.compilers/confdir -O /tmp/petsc-lj0zFz/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {** configtest === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -qmoddir= found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/compilers.py:1360) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1360) ================================================================================ TEST configureFortranCPP from PETSc.utilities.fortranCPP(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.utilities.fortranCPP(config/PETSc/utilities/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] ================================================================================ TEST checkStdC from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) ; #line 49 extern void *memmove (void *__dest, const void *__src, size_t __n) ; #line 57 extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) ; #line 65 extern void *memset (void *__s, int __c, size_t __n) ; #line 68 extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 95 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__pure__)) ; #line 128 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 136 extern char *strcat (char *__restrict __dest, const char *__restrict __src) ; extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 143 extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 150 extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 165 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__pure__)) ; extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) ; #line 175 extern char *strdup (const char *__s) __attribute__ ((__malloc__)) ; #line 183 extern char *strndup (const char *__string, size_t __n) __attribute__ ((__malloc__)) ; #line 235 extern char *strchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 262 extern char *strrchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 284 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__pure__)) ; #line 288 extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 314 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 342 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__pure__)) ; #line 348 extern char *strtok (char *__restrict __s, const char *__restrict __delim) ; #line 354 extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; #line 399 extern size_t strlen (const char *__s) __attribute__ ((__pure__)) ; #line 406 extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__pure__)) ; #line 413 extern char *strerror (int __errnum) ; #line 427 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) _Pragma("map(strerror_r, \"__xpg_strerror_r\")") ; #line 445 extern char *strerror_l (int __errnum, __locale_t __l) ; #line 451 extern void __bzero (void *__s, size_t __n) ; #line 455 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 459 extern void bzero (void *__s, size_t __n) ; #line 462 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 489 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 517 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 523 extern int ffs (int __i) __attribute__ ((const)); #line 536 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; #line 540 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 559 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) ; #line 566 extern char *strsignal (int __sig) ; #line 569 extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) ; #line 576 extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 68 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 98 typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) ; #line 145 extern double atof (const char *__nptr) __attribute__ ((__pure__)) ; extern int atoi (const char *__nptr) __attribute__ ((__pure__)) ; extern long int atol (const char *__nptr) __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__pure__)) ; #line 165 extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) ; #line 173 extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) ; extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) ; #line 184 extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 195 __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 209 __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 311 extern char *l64a (long int __n) ; #line 314 extern long int a64l (const char *__s) __attribute__ ((__pure__)) ; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 327 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int random (void) ; #line 330 extern void srandom (unsigned int __seed) ; #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; #line 341 extern char *setstate (char *__statebuf) ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) ; #line 380 extern int rand (void) ; extern void srand (unsigned int __seed) ; #line 387 extern int rand_r (unsigned int *__seed) ; #line 395 extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; #line 399 extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; #line 404 extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; #line 409 extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; #line 471 extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) ; #line 493 extern void cfree (void *__ptr) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern void *alloca (size_t __size) ; #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; #line 514 extern void abort (void) __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; #line 544 extern void exit (int __status) __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) __attribute__ ((__noreturn__)); #line 567 extern char *getenv (const char *__name) ; #line 572 extern char *__secure_getenv (const char *__name) ; #line 579 extern int putenv (char *__string) ; #line 585 extern int setenv (const char *__name, const char *__value, int __replace) ; #line 589 extern int unsetenv (const char *__name) ; #line 596 extern int clearenv (void) ; #line 606 extern char *mktemp (char *__template) ; #line 620 extern int mkstemp (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) ; #line 717 extern int system (const char *__command) ; #line 734 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) ; #line 742 typedef int (*__compar_fn_t) (const void *, const void *); #line 755 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 771 extern int abs (int __x) __attribute__ ((const)) ; extern long int labs (long int __x) __attribute__ ((const)) ; #line 776 __extension__ extern long long int llabs (long long int __x) __attribute__ ((const)) ; #line 785 extern div_t div (int __numer, int __denom) __attribute__ ((const)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((const)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((const)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; #line 860 extern int mblen (const char *__s, size_t __n) ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) ; extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) ; #line 885 extern int rpmatch (const char *__response) ; #line 896 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) ; #line 948 extern int getloadavg (double __loadavg[], int __nelem) ; sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.headers/conftest -O /tmp/petsc-lj0zFz/config.headers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.headers/conftest -O /tmp/petsc-lj0zFz/config.headers/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.headers/conftest sh: /tmp/petsc-lj0zFz/config.headers/conftest Executing: /tmp/petsc-lj0zFz/config.headers/conftest sh: Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 143 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/stat.h" struct stat { __dev_t st_dev; __ino_t st_ino; #line 151 __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad2; __dev_t st_rdev; __off_t st_size; #line 162 __blksize_t st_blksize; #line 165 __blkcnt_t st_blocks; #line 176 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 190 unsigned long int __unused4; unsigned long int __unused5; unsigned long int __unused6; }; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/stat.h" extern int stat (const char *__restrict __file, struct stat *__restrict __buf) ; #line 216 extern int fstat (int __fd, struct stat *__buf) ; #line 240 extern int fstatat (int __fd, const char *__restrict __file, struct stat *__restrict __buf, int __flag) ; #line 265 extern int lstat (const char *__restrict __file, struct stat *__restrict __buf) ; #line 286 extern int chmod (const char *__file, __mode_t __mode) ; #line 293 extern int lchmod (const char *__file, __mode_t __mode) ; #line 299 extern int fchmod (int __fd, __mode_t __mode) ; #line 305 extern int fchmodat (int __fd, const char *__file, __mode_t __mode, int __flag) ; #line 314 extern __mode_t umask (__mode_t __mask) ; #line 323 extern int mkdir (const char *__path, __mode_t __mode) ; #line 330 extern int mkdirat (int __fd, const char *__path, __mode_t __mode) ; #line 338 extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) ; #line 345 extern int mknodat (int __fd, const char *__path, __mode_t __mode, __dev_t __dev) ; #line 352 extern int mkfifo (const char *__path, __mode_t __mode) ; #line 359 extern int mkfifoat (int __fd, const char *__path, __mode_t __mode) ; #line 366 extern int utimensat (int __fd, const char *__path, const struct timespec __times[2], int __flags) ; #line 374 extern int futimens (int __fd, const struct timespec __times[2]) ; #line 401 extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) ; extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) ; #line 444 extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) ; extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) ; ================================================================================ TEST checkSysWait from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 174 typedef __pid_t pid_t; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 57 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; #line 73 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) ; #line 79 extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; #line 87 extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; #line 93 enum __itimer_which { ITIMER_REAL = 0, #line 99 ITIMER_VIRTUAL = 1, #line 103 ITIMER_PROF = 2 }; #line 109 struct itimerval { struct timeval it_interval; struct timeval it_value; }; #line 122 typedef int __itimer_which_t; #line 127 extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; #line 133 extern int setitimer (__itimer_which_t __which, const struct itimerval *__restrict __new, struct itimerval *__restrict __old) ; #line 140 extern int utimes (const char *__file, const struct timeval __tvp[2]) ; #line 145 extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; #line 149 extern int futimes (int __fd, const struct timeval __tvp[2]) ; Defined "HAVE_SYS_TIME_H" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include-fixed/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; #line 64 extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; #line 73 extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; #line 89 extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; #line 101 extern double exp (double __x) ; extern double __exp (double __x) ; #line 104 extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; #line 107 extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; #line 110 extern double log (double __x) ; extern double __log (double __x) ; #line 113 extern double log10 (double __x) ; extern double __log10 (double __x) ; #line 116 extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 129 extern double expm1 (double __x) ; extern double __expm1 (double __x) ; #line 132 extern double log1p (double __x) ; extern double __log1p (double __x) ; #line 135 extern double logb (double __x) ; extern double __logb (double __x) ; #line 142 extern double exp2 (double __x) ; extern double __exp2 (double __x) ; #line 145 extern double log2 (double __x) ; extern double __log2 (double __x) ; #line 154 extern double pow (double __x, double __y) ; extern double __pow (double __x, double __y) ; #line 157 extern double sqrt (double __x) ; extern double __sqrt (double __x) ; #line 163 extern double hypot (double __x, double __y) ; extern double __hypot (double __x, double __y) ; #line 170 extern double cbrt (double __x) ; extern double __cbrt (double __x) ; #line 179 extern double ceil (double __x) __attribute__ ((const)); extern double __ceil (double __x) __attribute__ ((const)); #line 182 extern double fabs (double __x) __attribute__ ((const)); extern double __fabs (double __x) __attribute__ ((const)); #line 185 extern double floor (double __x) __attribute__ ((const)); extern double __floor (double __x) __attribute__ ((const)); #line 188 extern double fmod (double __x, double __y) ; extern double __fmod (double __x, double __y) ; #line 193 extern int __isinf (double __value) __attribute__ ((const)); #line 196 extern int __finite (double __value) __attribute__ ((const)); #line 202 extern int isinf (double __value) __attribute__ ((const)); #line 205 extern int finite (double __value) __attribute__ ((const)); #line 208 extern double drem (double __x, double __y) ; extern double __drem (double __x, double __y) ; #line 212 extern double significand (double __x) ; extern double __significand (double __x) ; #line 218 extern double copysign (double __x, double __y) __attribute__ ((const)); extern double __copysign (double __x, double __y) __attribute__ ((const)); #line 225 extern double nan (const char *__tagb) __attribute__ ((const)); extern double __nan (const char *__tagb) __attribute__ ((const)); #line 231 extern int __isnan (double __value) __attribute__ ((const)); #line 235 extern int isnan (double __value) __attribute__ ((const)); #line 238 extern double j0 (double) ; extern double __j0 (double) ; extern double j1 (double) ; extern double __j1 (double) ; extern double jn (int, double) ; extern double __jn (int, double) ; extern double y0 (double) ; extern double __y0 (double) ; extern double y1 (double) ; extern double __y1 (double) ; extern double yn (int, double) ; extern double __yn (int, double) ; #line 250 extern double erf (double) ; extern double __erf (double) ; extern double erfc (double) ; extern double __erfc (double) ; extern double lgamma (double) ; extern double __lgamma (double) ; #line 259 extern double tgamma (double) ; extern double __tgamma (double) ; #line 265 extern double gamma (double) ; extern double __gamma (double) ; #line 272 extern double lgamma_r (double, int *__signgamp) ; extern double __lgamma_r (double, int *__signgamp) ; #line 280 extern double rint (double __x) ; extern double __rint (double __x) ; #line 283 extern double nextafter (double __x, double __y) __attribute__ ((const)); extern double __nextafter (double __x, double __y) __attribute__ ((const)); extern double nexttoward (double __x, long double __y) __attribute__ ((const)); extern double __nexttoward (double __x, long double __y) __attribute__ ((const)); #line 289 extern double remainder (double __x, double __y) ; extern double __remainder (double __x, double __y) ; #line 293 extern double scalbn (double __x, int __n) ; extern double __scalbn (double __x, int __n) ; #line 297 extern int ilogb (double __x) ; extern int __ilogb (double __x) ; #line 302 extern double scalbln (double __x, long int __n) ; extern double __scalbln (double __x, long int __n) ; #line 306 extern double nearbyint (double __x) ; extern double __nearbyint (double __x) ; #line 310 extern double round (double __x) __attribute__ ((const)); extern double __round (double __x) __attribute__ ((const)); #line 314 extern double trunc (double __x) __attribute__ ((const)); extern double __trunc (double __x) __attribute__ ((const)); #line 319 extern double remquo (double __x, double __y, int *__quo) ; extern double __remquo (double __x, double __y, int *__quo) ; #line 326 extern long int lrint (double __x) ; extern long int __lrint (double __x) ; extern long long int llrint (double __x) ; extern long long int __llrint (double __x) ; #line 331 extern long int lround (double __x) ; extern long int __lround (double __x) ; extern long long int llround (double __x) ; extern long long int __llround (double __x) ; #line 336 extern double fdim (double __x, double __y) ; extern double __fdim (double __x, double __y) ; #line 339 extern double fmax (double __x, double __y) ; extern double __fmax (double __x, double __y) ; #line 342 extern double fmin (double __x, double __y) ; extern double __fmin (double __x, double __y) ; #line 346 extern int __fpclassify (double __value) __attribute__ ((const)); #line 350 extern int __signbit (double __value) __attribute__ ((const)); #line 355 extern double fma (double __x, double __y, double __z) ; extern double __fma (double __x, double __y, double __z) ; #line 364 extern double scalb (double __x, double __n) ; extern double __scalb (double __x, double __n) ; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/mathcalls.h" extern float acosf (float __x) ; extern float __acosf (float __x) ; extern float asinf (float __x) ; extern float __asinf (float __x) ; extern float atanf (float __x) ; extern float __atanf (float __x) ; extern float atan2f (float __y, float __x) ; extern float __atan2f (float __y, float __x) ; #line 64 extern float cosf (float __x) ; extern float __cosf (float __x) ; extern float sinf (float __x) ; extern float __sinf (float __x) ; extern float tanf (float __x) ; extern float __tanf (float __x) ; #line 73 extern float coshf (float __x) ; extern float __coshf (float __x) ; extern float sinhf (float __x) ; extern float __sinhf (float __x) ; extern float tanhf (float __x) ; extern float __tanhf (float __x) ; #line 89 extern float acoshf (float __x) ; extern float __acoshf (float __x) ; extern float asinhf (float __x) ; extern float __asinhf (float __x) ; extern float atanhf (float __x) ; extern float __atanhf (float __x) ; #line 101 extern float expf (float __x) ; extern float __expf (float __x) ; #line 104 extern float frexpf (float __x, int *__exponent) ; extern float __frexpf (float __x, int *__exponent) ; #line 107 extern float ldexpf (float __x, int __exponent) ; extern float __ldexpf (float __x, int __exponent) ; #line 110 extern float logf (float __x) ; extern float __logf (float __x) ; #line 113 extern float log10f (float __x) ; extern float __log10f (float __x) ; #line 116 extern float modff (float __x, float *__iptr) ; extern float __modff (float __x, float *__iptr) ; #line 129 extern float expm1f (float __x) ; extern float __expm1f (float __x) ; #line 132 extern float log1pf (float __x) ; extern float __log1pf (float __x) ; #line 135 extern float logbf (float __x) ; extern float __logbf (float __x) ; #line 142 extern float exp2f (float __x) ; extern float __exp2f (float __x) ; #line 145 extern float log2f (float __x) ; extern float __log2f (float __x) ; #line 154 extern float powf (float __x, float __y) ; extern float __powf (float __x, float __y) ; #line 157 extern float sqrtf (float __x) ; extern float __sqrtf (float __x) ; #line 163 extern float hypotf (float __x, float __y) ; extern float __hypotf (float __x, float __y) ; #line 170 extern float cbrtf (float __x) ; extern float __cbrtf (float __x) ; #line 179 extern float ceilf (float __x) __attribute__ ((const)); extern float __ceilf (float __x) __attribute__ ((const)); #line 182 extern float fabsf (float __x) __attribute__ ((const)); extern float __fabsf (float __x) __attribute__ ((const)); #line 185 extern float floorf (float __x) __attribute__ ((const)); extern float __floorf (float __x) __attribute__ ((const)); #line 188 extern float fmodf (float __x, float __y) ; extern float __fmodf (float __x, float __y) ; #line 193 extern int __isinff (float __value) __attribute__ ((const)); #line 196 extern int __finitef (float __value) __attribute__ ((const)); #line 202 extern int isinff (float __value) __attribute__ ((const)); #line 205 extern int finitef (float __value) __attribute__ ((const)); #line 208 extern float dremf (float __x, float __y) ; extern float __dremf (float __x, float __y) ; #line 212 extern float significandf (float __x) ; extern float __significandf (float __x) ; #line 218 extern float copysignf (float __x, float __y) __attribute__ ((const)); extern float __copysignf (float __x, float __y) __attribute__ ((const)); #line 225 extern float nanf (const char *__tagb) __attribute__ ((const)); extern float __nanf (const char *__tagb) __attribute__ ((const)); #line 231 extern int __isnanf (float __value) __attribute__ ((const)); #line 235 extern int isnanf (float __value) __attribute__ ((const)); #line 238 extern float j0f (float) ; extern float __j0f (float) ; extern float j1f (float) ; extern float __j1f (float) ; extern float jnf (int, float) ; extern float __jnf (int, float) ; extern float y0f (float) ; extern float __y0f (float) ; extern float y1f (float) ; extern float __y1f (float) ; extern float ynf (int, float) ; extern float __ynf (int, float) ; #line 250 extern float erff (float) ; extern float __erff (float) ; extern float erfcf (float) ; extern float __erfcf (float) ; extern float lgammaf (float) ; extern float __lgammaf (float) ; #line 259 extern float tgammaf (float) ; extern float __tgammaf (float) ; #line 265 extern float gammaf (float) ; extern float __gammaf (float) ; #line 272 extern float lgammaf_r (float, int *__signgamp) ; extern float __lgammaf_r (float, int *__signgamp) ; #line 280 extern float rintf (float __x) ; extern float __rintf (float __x) ; #line 283 extern float nextafterf (float __x, float __y) __attribute__ ((const)); extern float __nextafterf (float __x, float __y) __attribute__ ((const)); extern float nexttowardf (float __x, long double __y) __attribute__ ((const)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((const)); #line 289 extern float remainderf (float __x, float __y) ; extern float __remainderf (float __x, float __y) ; #line 293 extern float scalbnf (float __x, int __n) ; extern float __scalbnf (float __x, int __n) ; #line 297 extern int ilogbf (float __x) ; extern int __ilogbf (float __x) ; #line 302 extern float scalblnf (float __x, long int __n) ; extern float __scalblnf (float __x, long int __n) ; #line 306 extern float nearbyintf (float __x) ; extern float __nearbyintf (float __x) ; #line 310 extern float roundf (float __x) __attribute__ ((const)); extern float __roundf (float __x) __attribute__ ((const)); #line 314 extern float truncf (float __x) __attribute__ ((const)); extern float __truncf (float __x) __attribute__ ((const)); #line 319 extern float remquof (float __x, float __y, int *__quo) ; extern float __remquof (float __x, float __y, int *__quo) ; #line 326 extern long int lrintf (float __x) ; extern long int __lrintf (float __x) ; extern long long int llrintf (float __x) ; extern long long int __llrintf (float __x) ; #line 331 extern long int lroundf (float __x) ; extern long int __lroundf (float __x) ; extern long long int llroundf (float __x) ; extern long long int __llroundf (float __x) ; #line 336 extern float fdimf (float __x, float __y) ; extern float __fdimf (float __x, float __y) ; #line 339 extern float fmaxf (float __x, float __y) ; extern float __fmaxf (float __x, float __y) ; #line 342 extern float fminf (float __x, float __y) ; extern float __fminf (float __x, float __y) ; #line 346 extern int __fpclassifyf (float __value) __attribute__ ((const)); #line 350 extern int __signbitf (float __value) __attribute__ ((const)); #line 355 extern float fmaf (float __x, float __y, float __z) ; extern float __fmaf (float __x, float __y, float __z) ; #line 364 extern float scalbf (float __x, float __n) ; extern float __scalbf (float __x, float __n) ; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/mathcalls.h" extern long double acosl (long double __x) ; extern long double __acosl (long double __x) ; extern long double asinl (long double __x) ; extern long double __asinl (long double __x) ; extern long double atanl (long double __x) ; extern long double __atanl (long double __x) ; extern long double atan2l (long double __y, long double __x) ; extern long double __atan2l (long double __y, long double __x) ; #line 64 extern long double cosl (long double __x) ; extern long double __cosl (long double __x) ; extern long double sinl (long double __x) ; extern long double __sinl (long double __x) ; extern long double tanl (long double __x) ; extern long double __tanl (long double __x) ; #line 73 extern long double coshl (long double __x) ; extern long double __coshl (long double __x) ; extern long double sinhl (long double __x) ; extern long double __sinhl (long double __x) ; extern long double tanhl (long double __x) ; extern long double __tanhl (long double __x) ; #line 89 extern long double acoshl (long double __x) ; extern long double __acoshl (long double __x) ; extern long double asinhl (long double __x) ; extern long double __asinhl (long double __x) ; extern long double atanhl (long double __x) ; extern long double __atanhl (long double __x) ; #line 101 extern long double expl (long double __x) ; extern long double __expl (long double __x) ; #line 104 extern long double frexpl (long double __x, int *__exponent) ; extern long double __frexpl (long double __x, int *__exponent) ; #line 107 extern long double ldexpl (long double __x, int __exponent) ; extern long double __ldexpl (long double __x, int __exponent) ; #line 110 extern long double logl (long double __x) ; extern long double __logl (long double __x) ; #line 113 extern long double log10l (long double __x) ; extern long double __log10l (long double __x) ; #line 116 extern long double modfl (long double __x, long double *__iptr) ; extern long double __modfl (long double __x, long double *__iptr) ; #line 129 extern long double expm1l (long double __x) ; extern long double __expm1l (long double __x) ; #line 132 extern long double log1pl (long double __x) ; extern long double __log1pl (long double __x) ; #line 135 extern long double logbl (long double __x) ; extern long double __logbl (long double __x) ; #line 142 extern long double exp2l (long double __x) ; extern long double __exp2l (long double __x) ; #line 145 extern long double log2l (long double __x) ; extern long double __log2l (long double __x) ; #line 154 extern long double powl (long double __x, long double __y) ; extern long double __powl (long double __x, long double __y) ; #line 157 extern long double sqrtl (long double __x) ; extern long double __sqrtl (long double __x) ; #line 163 extern long double hypotl (long double __x, long double __y) ; extern long double __hypotl (long double __x, long double __y) ; #line 170 extern long double cbrtl (long double __x) ; extern long double __cbrtl (long double __x) ; #line 179 extern long double ceill (long double __x) __attribute__ ((const)); extern long double __ceill (long double __x) __attribute__ ((const)); #line 182 extern long double fabsl (long double __x) __attribute__ ((const)); extern long double __fabsl (long double __x) __attribute__ ((const)); #line 185 extern long double floorl (long double __x) __attribute__ ((const)); extern long double __floorl (long double __x) __attribute__ ((const)); #line 188 extern long double fmodl (long double __x, long double __y) ; extern long double __fmodl (long double __x, long double __y) ; #line 193 extern int __isinfl (long double __value) __attribute__ ((const)); #line 196 extern int __finitel (long double __value) __attribute__ ((const)); #line 202 extern int isinfl (long double __value) __attribute__ ((const)); #line 205 extern int finitel (long double __value) __attribute__ ((const)); #line 208 extern long double dreml (long double __x, long double __y) ; extern long double __dreml (long double __x, long double __y) ; #line 212 extern long double significandl (long double __x) ; extern long double __significandl (long double __x) ; #line 218 extern long double copysignl (long double __x, long double __y) __attribute__ ((const)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((const)); #line 225 extern long double nanl (const char *__tagb) __attribute__ ((const)); extern long double __nanl (const char *__tagb) __attribute__ ((const)); #line 231 extern int __isnanl (long double __value) __attribute__ ((const)); #line 235 extern int isnanl (long double __value) __attribute__ ((const)); #line 238 extern long double j0l (long double) ; extern long double __j0l (long double) ; extern long double j1l (long double) ; extern long double __j1l (long double) ; extern long double jnl (int, long double) ; extern long double __jnl (int, long double) ; extern long double y0l (long double) ; extern long double __y0l (long double) ; extern long double y1l (long double) ; extern long double __y1l (long double) ; extern long double ynl (int, long double) ; extern long double __ynl (int, long double) ; #line 250 extern long double erfl (long double) ; extern long double __erfl (long double) ; extern long double erfcl (long double) ; extern long double __erfcl (long double) ; extern long double lgammal (long double) ; extern long double __lgammal (long double) ; #line 259 extern long double tgammal (long double) ; extern long double __tgammal (long double) ; #line 265 extern long double gammal (long double) ; extern long double __gammal (long double) ; #line 272 extern long double lgammal_r (long double, int *__signgamp) ; extern long double __lgammal_r (long double, int *__signgamp) ; #line 280 extern long double rintl (long double __x) ; extern long double __rintl (long double __x) ; #line 283 extern long double nextafterl (long double __x, long double __y) __attribute__ ((const)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((const)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((const)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((const)); #line 289 extern long double remainderl (long double __x, long double __y) ; extern long double __remainderl (long double __x, long double __y) ; #line 293 extern long double scalbnl (long double __x, int __n) ; extern long double __scalbnl (long double __x, int __n) ; #line 297 extern int ilogbl (long double __x) ; extern int __ilogbl (long double __x) ; #line 302 extern long double scalblnl (long double __x, long int __n) ; extern long double __scalblnl (long double __x, long int __n) ; #line 306 extern long double nearbyintl (long double __x) ; extern long double __nearbyintl (long double __x) ; #line 310 extern long double roundl (long double __x) __attribute__ ((const)); extern long double __roundl (long double __x) __attribute__ ((const)); #line 314 extern long double truncl (long double __x) __attribute__ ((const)); extern long double __truncl (long double __x) __attribute__ ((const)); #line 319 extern long double remquol (long double __x, long double __y, int *__quo) ; extern long double __remquol (long double __x, long double __y, int *__quo) ; #line 326 extern long int lrintl (long double __x) ; extern long int __lrintl (long double __x) ; extern long long int llrintl (long double __x) ; extern long long int __llrintl (long double __x) ; #line 331 extern long int lroundl (long double __x) ; extern long int __lroundl (long double __x) ; extern long long int llroundl (long double __x) ; extern long long int __llroundl (long double __x) ; #line 336 extern long double fdiml (long double __x, long double __y) ; extern long double __fdiml (long double __x, long double __y) ; #line 339 extern long double fmaxl (long double __x, long double __y) ; extern long double __fmaxl (long double __x, long double __y) ; #line 342 extern long double fminl (long double __x, long double __y) ; extern long double __fminl (long double __x, long double __y) ; #line 346 extern int __fpclassifyl (long double __value) __attribute__ ((const)); #line 350 extern int __signbitl (long double __value) __attribute__ ((const)); #line 355 extern long double fmal (long double __x, long double __y, long double __z) ; extern long double __fmal (long double __x, long double __y, long double __z) ; #line 364 extern long double scalbl (long double __x, long double __n) ; extern long double __scalbl (long double __x, long double __n) ; #line 157 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/math.h" extern int signgam; #line 198 enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; #line 291 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; #line 303 extern _LIB_VERSION_TYPE _LIB_VERSION; #line 316 struct exception { int type; char *name; double arg1; double arg2; double retval; }; #line 329 extern int matherr (struct exception *__exc); Defined "HAVE_MATH_H" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 150 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; #line 161 __pid_t l_pid; }; #line 143 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/stat.h" struct stat { __dev_t st_dev; __ino_t st_ino; #line 151 __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad2; __dev_t st_rdev; __off_t st_size; #line 162 __blksize_t st_blksize; #line 165 __blkcnt_t st_blocks; #line 176 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 190 unsigned long int __unused4; unsigned long int __unused5; unsigned long int __unused6; }; #line 122 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); #line 131 extern int open (const char *__file, int __oflag, ...) ; #line 155 extern int openat (int __fd, const char *__file, int __oflag, ...) ; #line 177 extern int creat (const char *__file, __mode_t __mode) ; #line 206 extern int lockf (int __fd, int __cmd, __off_t __len); #line 223 extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 245 extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 149 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef long int ptrdiff_t; #line 211 typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" struct _IO_FILE; #line 49 typedef struct _IO_FILE FILE; #line 65 typedef struct _IO_FILE __FILE; #line 83 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/wchar.h" typedef struct { int __count; union { unsigned int __wch; #line 93 char __wchb[4]; } __value; } __mbstate_t; #line 22 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 53 typedef int _G_int16_t __attribute__ ((__mode__ (__HI__))); typedef int _G_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int _G_uint16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int _G_uint32_t __attribute__ ((__mode__ (__SI__))); #line 70 "/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/include/stdarg.h" typedef __builtin_va_list __gnuc_va_list; #line 79 typedef __builtin_va_list va_list; #line 170 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 typedef void _IO_lock_t; #line 186 struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; #line 192 int _pos; #line 203 }; #line 206 enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 271 struct _IO_FILE { int _flags; #line 277 char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; #line 298 int _flags2; __off_t _old_offset; #line 304 unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; #line 310 _IO_lock_t *_lock; #line 319 __off64_t _offset; #line 328 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; #line 341 typedef struct _IO_FILE _IO_FILE; #line 344 struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 364 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); #line 372 typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); #line 381 typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); #line 384 typedef int __io_close_fn (void *__cookie); #line 416 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 460 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); #line 471 extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 490 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 91 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" typedef __off_t off_t; #line 103 typedef __ssize_t ssize_t; #line 111 typedef _G_fpos_t fpos_t; #line 165 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; #line 175 extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; #line 182 extern int renameat (int __oldfd, const char *__old, int __newfd, const char *__new) ; #line 192 extern FILE *tmpfile (void) ; #line 206 extern char *tmpnam (char *__s) ; #line 212 extern char *tmpnam_r (char *__s) ; #line 224 extern char *tempnam (const char *__dir, const char *__pfx) __attribute__ ((__malloc__)) ; #line 234 extern int fclose (FILE *__stream); #line 239 extern int fflush (FILE *__stream); #line 249 extern int fflush_unlocked (FILE *__stream); #line 269 extern FILE *fopen (const char *__restrict __filename, const char *__restrict __modes) ; #line 275 extern FILE *freopen (const char *__restrict __filename, const char *__restrict __modes, FILE *__restrict __stream) ; #line 303 extern FILE *fdopen (int __fd, const char *__modes) ; #line 316 extern FILE *fmemopen (void *__s, size_t __len, const char *__modes) ; #line 322 extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) ; #line 329 extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) ; #line 333 extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) ; #line 340 extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) ; #line 344 extern void setlinebuf (FILE *__stream) ; #line 353 extern int fprintf (FILE *__restrict __stream, const char *__restrict __format, ...); #line 359 extern int printf (const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, const char *__restrict __format, ...) ; #line 368 extern int vfprintf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg); #line 374 extern int vprintf (const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) ; #line 383 extern int snprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, ...) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 3, 0))); #line 414 extern int vdprintf (int __fd, const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); #line 427 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) ; #line 433 extern int scanf (const char *__restrict __format, ...) ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) ; #line 445 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) _Pragma("map(fscanf, \"__isoc99_fscanf\")") ; extern int scanf (const char *__restrict __format, ...) _Pragma("map(scanf, \"__isoc99_scanf\")") ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) _Pragma("map(sscanf, \"__isoc99_sscanf\")"); #line 473 extern int vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; #line 481 extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; #line 485 extern int vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))); #line 496 extern int #line 499 vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vfscanf, \"__isoc99_vfscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vscanf, \"__isoc99_vscanf\")") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int #line 507 vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vsscanf, \"__isoc99_vsscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))); #line 533 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); #line 540 extern int getchar (void); #line 552 extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); #line 563 extern int fgetc_unlocked (FILE *__stream); #line 575 extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); #line 582 extern int putchar (int __c); #line 596 extern int fputc_unlocked (int __c, FILE *__stream); #line 604 extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); #line 612 extern int getw (FILE *__stream); #line 615 extern int putw (int __w, FILE *__stream); #line 624 extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; #line 632 extern char *gets (char *__s) ; #line 658 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; #line 671 extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; #line 682 extern int fputs (const char *__restrict __s, FILE *__restrict __stream); #line 688 extern int puts (const char *__s); #line 695 extern int ungetc (int __c, FILE *__stream); #line 702 extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 708 extern size_t fwrite (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s) ; #line 730 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 742 extern int fseek (FILE *__stream, long int __off, int __whence); #line 747 extern long int ftell (FILE *__stream) ; #line 752 extern void rewind (FILE *__stream); #line 766 extern int fseeko (FILE *__stream, __off_t __off, int __whence); #line 771 extern __off_t ftello (FILE *__stream) ; #line 791 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); #line 796 extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 819 extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; #line 828 extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; #line 839 extern void perror (const char *__s); #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 851 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" extern int fileno (FILE *__stream) ; #line 856 extern int fileno_unlocked (FILE *__stream) ; #line 866 extern FILE *popen (const char *__command, const char *__modes) ; #line 872 extern int pclose (FILE *__stream); #line 878 extern char *ctermid (char *__s) ; #line 906 extern void flockfile (FILE *__stream) ; #line 910 extern int ftrylockfile (FILE *__stream) ; #line 913 extern void funlockfile (FILE *__stream) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/malloc.h" extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; #line 54 extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 62 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); #line 66 extern void free (void *__ptr) ; #line 69 extern void cfree (void *__ptr) ; #line 72 extern void *memalign (size_t __alignment, size_t __size) __attribute__ ((__malloc__)) ; #line 76 extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 81 extern void * pvalloc (size_t __size) __attribute__ ((__malloc__)) ; #line 86 extern void *(*__morecore) (ptrdiff_t __size); #line 89 extern void *__default_morecore (ptrdiff_t __size) __attribute__ ((__malloc__)); #line 94 struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; #line 108 extern struct mallinfo mallinfo (void) ; #line 135 extern int mallopt (int __param, int __val) ; #line 139 extern int malloc_trim (size_t __pad) ; #line 143 extern size_t malloc_usable_size (void *__ptr) ; #line 146 extern void malloc_stats (void) ; #line 149 extern int malloc_info (int __options, FILE *__fp); #line 152 extern void *malloc_get_state (void) ; #line 156 extern int malloc_set_state (void *__ptr) ; #line 161 extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); #line 175 extern void __malloc_check_init (void) ; Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 39 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pwd.h" typedef __gid_t gid_t; #line 44 typedef __uid_t uid_t; #line 50 struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" struct _IO_FILE; #line 49 typedef struct _IO_FILE FILE; #line 73 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pwd.h" extern void setpwent (void); #line 79 extern void endpwent (void); #line 85 extern struct passwd *getpwent (void); #line 95 extern struct passwd *fgetpwent (FILE *__stream); #line 103 extern int putpwent (const struct passwd *__restrict __p, FILE *__restrict __f); #line 111 extern struct passwd *getpwuid (__uid_t __uid); #line 117 extern struct passwd *getpwnam (const char *__name); #line 140 extern int getpwent_r (struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); #line 145 extern int getpwuid_r (__uid_t __uid, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwnam_r (const char *__restrict __name, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); #line 164 extern int fgetpwent_r (FILE *__restrict __stream, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/search.h" extern void insque (void *__elem, void *__prev) ; #line 48 extern void remque (void *__elem) ; #line 55 typedef int (*__compar_fn_t) (const void *, const void *); #line 63 typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; #line 78 struct _ENTRY; #line 88 extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; #line 91 extern int hcreate (size_t __nel) ; #line 94 extern void hdestroy (void) ; #line 119 typedef enum { preorder, postorder, endorder, leaf } VISIT; #line 130 extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); #line 135 extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); #line 139 extern void *tdelete (const void *__restrict __key, void **__restrict __rootp, __compar_fn_t __compar); #line 145 typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); #line 151 extern void twalk (const void *__root, __action_fn_t __action); #line 165 extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 170 extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)); #line 45 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 48 extern void bzero (void *__s, size_t __n) ; #line 74 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 102 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 110 extern int ffs (int __i) __attribute__ ((const)); #line 114 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)); #line 118 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)); #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 129 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/strings.h" extern int strcasecmp_l (const char *__s1, const char *__s2, __locale_t __loc) __attribute__ ((__pure__)) ; extern int strncasecmp_l (const char *__s1, const char *__s2, size_t __n, __locale_t __loc) __attribute__ ((__pure__)) ; Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 221 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" typedef __ssize_t ssize_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 233 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" typedef __gid_t gid_t; #line 238 typedef __uid_t uid_t; #line 244 typedef __off_t off_t; #line 256 typedef __useconds_t useconds_t; #line 261 typedef __pid_t pid_t; #line 268 typedef __intptr_t intptr_t; #line 275 typedef __socklen_t socklen_t; #line 288 extern int access (const char *__name, int __type) ; #line 305 extern int faccessat (int __fd, const char *__file, int __type, int __flag) ; #line 331 extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 350 extern int close (int __fd); #line 357 extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; #line 363 extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 373 extern ssize_t pread (int __fd, void *__buf, size_t __nbytes, __off_t __offset) ; #line 381 extern ssize_t pwrite (int __fd, const void *__buf, size_t __n, __off_t __offset) ; #line 414 extern int pipe (int __pipedes[2]) ; #line 429 extern unsigned int alarm (unsigned int __seconds) ; #line 441 extern unsigned int sleep (unsigned int __seconds); #line 449 extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; #line 457 extern int usleep (__useconds_t __useconds); #line 466 extern int pause (void); #line 470 extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 475 extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; #line 480 extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 488 extern int fchownat (int __fd, const char *__file, __uid_t __owner, __gid_t __group, int __flag) ; #line 494 extern int chdir (const char *__path) ; #line 498 extern int fchdir (int __fd) ; #line 508 extern char *getcwd (char *__buf, size_t __size) ; #line 522 extern char *getwd (char *__buf) __attribute__ ((__deprecated__)) ; #line 528 extern int dup (int __fd) ; #line 531 extern int dup2 (int __fd, int __fd2) ; #line 540 extern char **__environ; #line 548 extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 554 extern int fexecve (int __fd, char *const __argv[], char *const __envp[]) ; #line 560 extern int execv (const char *__path, char *const __argv[]) ; #line 565 extern int execle (const char *__path, const char *__arg, ...) ; #line 570 extern int execl (const char *__path, const char *__arg, ...) ; #line 575 extern int execvp (const char *__file, char *const __argv[]) ; #line 581 extern int execlp (const char *__file, const char *__arg, ...) ; #line 595 extern int nice (int __inc) ; #line 600 extern void _exit (int __status) __attribute__ ((__noreturn__)); #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; #line 73 enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, #line 138 _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, #line 151 _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, #line 172 _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, #line 187 _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, #line 219 _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, #line 252 _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, #line 265 _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, #line 278 _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, #line 285 _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, #line 292 _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, #line 329 _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, #line 342 _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, #line 351 _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, #line 358 _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, #line 447 _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, #line 456 _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, #line 467 _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, #line 499 _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, #line 504 _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, #line 513 _SC_SS_REPL_MAX, #line 516 _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, #line 525 _SC_XOPEN_STREAMS, #line 528 _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; #line 535 enum { _CS_PATH, #line 540 _CS_V6_WIDTH_RESTRICTED_ENVS, #line 544 _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, #line 549 _CS_V5_WIDTH_RESTRICTED_ENVS, #line 553 _CS_V7_WIDTH_RESTRICTED_ENVS, #line 557 _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, #line 574 _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, #line 607 _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, #line 640 _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS, #line 673 _CS_V6_ENV, _CS_V7_ENV }; #line 609 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" extern long int pathconf (const char *__path, int __name) ; #line 613 extern long int fpathconf (int __fd, int __name) ; #line 616 extern long int sysconf (int __name) ; #line 620 extern size_t confstr (int __name, char *__buf, size_t __len) ; #line 625 extern __pid_t getpid (void) ; #line 628 extern __pid_t getppid (void) ; #line 633 extern __pid_t getpgrp (void) ; #line 643 extern __pid_t __getpgid (__pid_t __pid) ; extern __pid_t getpgid (__pid_t __pid) ; #line 652 extern int setpgid (__pid_t __pid, __pid_t __pgid) ; #line 669 extern int setpgrp (void) ; #line 686 extern __pid_t setsid (void) ; #line 690 extern __pid_t getsid (__pid_t __pid) ; #line 694 extern __uid_t getuid (void) ; #line 697 extern __uid_t geteuid (void) ; #line 700 extern __gid_t getgid (void) ; #line 703 extern __gid_t getegid (void) ; #line 708 extern int getgroups (int __size, __gid_t __list[]) ; #line 719 extern int setuid (__uid_t __uid) ; #line 724 extern int setreuid (__uid_t __ruid, __uid_t __euid) ; #line 729 extern int seteuid (__uid_t __uid) ; #line 736 extern int setgid (__gid_t __gid) ; #line 741 extern int setregid (__gid_t __rgid, __gid_t __egid) ; #line 746 extern int setegid (__gid_t __gid) ; #line 775 extern __pid_t fork (void) ; #line 783 extern __pid_t vfork (void) ; #line 789 extern char *ttyname (int __fd) ; #line 793 extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; #line 798 extern int isatty (int __fd) ; #line 804 extern int ttyslot (void) ; #line 809 extern int link (const char *__from, const char *__to) ; #line 815 extern int linkat (int __fromfd, const char *__from, int __tofd, const char *__to, int __flags) ; #line 822 extern int symlink (const char *__from, const char *__to) ; #line 828 extern ssize_t readlink (const char *__restrict __path, char *__restrict __buf, size_t __len) ; #line 835 extern int symlinkat (const char *__from, int __tofd, const char *__to) ; #line 839 extern ssize_t readlinkat (int __fd, const char *__restrict __path, char *__restrict __buf, size_t __len) ; #line 845 extern int unlink (const char *__name) ; #line 849 extern int unlinkat (int __fd, const char *__name, int __flag) ; #line 854 extern int rmdir (const char *__path) ; #line 858 extern __pid_t tcgetpgrp (int __fd) ; #line 861 extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; #line 868 extern char *getlogin (void); #line 876 extern int getlogin_r (char *__name, size_t __name_len) ; #line 881 extern int setlogin (const char *__name) ; #line 59 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/getopt.h" extern char *optarg; #line 73 extern int optind; #line 78 extern int opterr; #line 82 extern int optopt; #line 152 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 898 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" extern int gethostname (char *__name, size_t __len) ; #line 905 extern int sethostname (const char *__name, size_t __len) ; #line 910 extern int sethostid (long int __id) ; #line 916 extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; #line 925 extern int vhangup (void) ; #line 928 extern int revoke (const char *__file) ; #line 936 extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; #line 944 extern int acct (const char *__name) ; #line 948 extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; #line 956 extern int daemon (int __nochdir, int __noclose) ; #line 963 extern int chroot (const char *__path) ; #line 967 extern char *getpass (const char *__prompt) ; #line 976 extern int fsync (int __fd); #line 983 extern long int gethostid (void); #line 986 extern void sync (void) ; #line 992 extern int getpagesize (void) __attribute__ ((const)); #line 997 extern int getdtablesize (void) ; #line 1007 extern int truncate (const char *__file, __off_t __length) ; #line 1026 extern int ftruncate (int __fd, __off_t __length) ; #line 1047 extern int brk (void *__addr) ; #line 1053 extern void *sbrk (intptr_t __delta) ; #line 1068 extern long int syscall (long int __sysno, ...) ; #line 1091 extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1122 extern int fdatasync (int __fildes); #line 1151 extern char *ctermid (char *__s) ; Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 11 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 60 struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; #line 34 extern int get_nprocs_conf (void) ; #line 37 extern int get_nprocs (void) ; #line 41 extern long int get_phys_pages (void) ; #line 44 extern long int get_avphys_pages (void) ; Possible ERROR while running preprocessor: "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. error message = {"/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 104 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __sig_atomic_t sig_atomic_t; #line 50 typedef __sigset_t sigset_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __pid_t pid_t; #line 68 typedef __uid_t uid_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 51 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; #line 63 struct { __pid_t si_pid; __uid_t si_uid; } _kill; #line 70 struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; #line 78 struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; #line 86 struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; #line 96 struct { void *si_addr; } _sigfault; #line 102 struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 129 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; #line 153 enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; #line 174 enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; #line 195 enum { SEGV_MAPERR = 1, SEGV_ACCERR }; #line 204 enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; #line 215 enum { TRAP_BRKPT = 1, TRAP_TRACE }; #line 224 enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; #line 241 enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; #line 273 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; #line 285 __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; #line 300 enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, #line 309 SIGEV_THREAD_ID = 4 }; #line 84 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef void (*__sighandler_t) (int); #line 89 extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; #line 101 extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 126 extern int kill (__pid_t __pid, int __sig) ; #line 133 extern int killpg (__pid_t __pgrp, int __sig) ; #line 138 extern int raise (int __sig) ; #line 143 extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; #line 150 extern void psignal (int __sig, const char *__s); #line 155 extern void psiginfo (const siginfo_t *__pinfo, const char *__s); #line 168 extern int __sigpause (int __sig_or_mask, int __is_sig); #line 196 extern int sigblock (int __mask) __attribute__ ((__deprecated__)); #line 199 extern int sigsetmask (int __mask) __attribute__ ((__deprecated__)); #line 202 extern int siggetmask (void) __attribute__ ((__deprecated__)); #line 216 typedef __sighandler_t sig_t; #line 222 extern int sigemptyset (sigset_t *__set) ; #line 225 extern int sigfillset (sigset_t *__set) ; #line 228 extern int sigaddset (sigset_t *__set, int __signo) ; #line 231 extern int sigdelset (sigset_t *__set, int __signo) ; #line 234 extern int sigismember (const sigset_t *__set, int __signo) ; #line 25 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigaction.h" struct sigaction { #line 29 union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; #line 44 __sigset_t sa_mask; #line 47 int sa_flags; #line 50 void (*sa_restorer) (void); }; #line 255 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) ; #line 263 extern int sigsuspend (const sigset_t *__set) ; #line 266 extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) ; #line 270 extern int sigpending (sigset_t *__set) ; #line 277 extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) ; #line 285 extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) ; #line 293 extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) ; #line 300 extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; #line 310 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; #line 314 struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; #line 334 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/ptrace.h" struct pt_regs { unsigned long gpr[32]; unsigned long nip; unsigned long msr; unsigned long orig_gpr3; unsigned long ctr; unsigned long link; unsigned long xer; unsigned long ccr; unsigned long softe; #line 44 unsigned long trap; #line 47 unsigned long dar; unsigned long dsisr; unsigned long result; }; #line 19 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm-generic/int-l64.h" typedef signed char __s8; typedef unsigned char __u8; typedef signed short __s16; typedef unsigned short __u16; typedef signed int __s32; typedef unsigned int __u32; typedef signed long __s64; typedef unsigned long __u64; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/types.h" typedef unsigned int umode_t; #line 36 typedef struct { __u32 u[4]; } __attribute__((aligned(16))) __vector128; #line 36 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/posix_types.h" typedef struct { unsigned long fds_bits [(1024/(8 * sizeof(unsigned long)))]; } __kernel_fd_set; #line 41 typedef void (*__kernel_sighandler_t)(int); #line 44 typedef int __kernel_key_t; typedef int __kernel_mqd_t; #line 10 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/posix_types.h" typedef unsigned long __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef long __kernel_off_t; typedef int __kernel_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef long __kernel_ptrdiff_t; typedef long __kernel_time_t; typedef long __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef long __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; typedef unsigned int __kernel_old_uid_t; typedef unsigned int __kernel_old_gid_t; #line 32 typedef unsigned long __kernel_nlink_t; typedef int __kernel_ipc_pid_t; typedef unsigned long __kernel_size_t; typedef long __kernel_ssize_t; typedef unsigned long __kernel_old_dev_t; #line 46 typedef long long __kernel_loff_t; #line 53 typedef struct { int val[2]; } __kernel_fsid_t; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/types.h" typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; #line 95 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/elf.h" typedef unsigned long elf_greg_t64; typedef elf_greg_t64 elf_gregset_t64[48]; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[48]; typedef elf_gregset_t32 compat_elf_gregset_t; #line 123 typedef elf_greg_t64 elf_greg_t; typedef elf_gregset_t64 elf_gregset_t; #line 132 typedef double elf_fpreg_t; typedef elf_fpreg_t elf_fpregset_t[33]; #line 154 typedef __vector128 elf_vrreg_t; typedef elf_vrreg_t elf_vrregset_t[34]; typedef elf_vrreg_t elf_vrregset_t32[33]; typedef elf_fpreg_t elf_vsrreghalf_t32[32]; #line 300 struct ppc64_opd_entry { unsigned long funcaddr; unsigned long r2; }; #line 16 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/sigcontext.h" struct sigcontext { unsigned long _unused[4]; int signal; int _pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; elf_gregset_t gp_regs; elf_fpregset_t fp_regs; #line 82 elf_vrreg_t *v_regs; long vmx_reserve[34+34+32+1]; }; #line 342 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 354 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; #line 34 enum { SS_ONSTACK = 1, SS_DISABLE }; #line 50 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 78 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/ucontext.h" typedef unsigned long gregset_t[48]; typedef double fpregset_t[33]; #line 84 typedef struct _libc_vscr { unsigned int __pad[3]; unsigned int vscr_word; } vscr_t; #line 92 typedef struct _libc_vrstate { unsigned int vrregs[32][4]; vscr_t vscr; unsigned int vrsave; unsigned int __pad[3]; } vrregset_t __attribute__((__aligned__(16))); typedef struct { unsigned long __unused[4]; int signal; int __pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; gregset_t gp_regs; fpregset_t fp_regs; #line 128 vrregset_t *v_regs; #line 132 long vmx_reserve[34+34+32+1]; } mcontext_t; #line 138 typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; #line 175 sigset_t uc_sigmask; mcontext_t uc_mcontext; } ucontext_t; #line 365 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__deprecated__)); #line 370 extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask); #line 36 extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 402 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 57 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; #line 73 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) ; #line 79 extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; #line 87 extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; #line 93 enum __itimer_which { ITIMER_REAL = 0, #line 99 ITIMER_VIRTUAL = 1, #line 103 ITIMER_PROF = 2 }; #line 109 struct itimerval { struct timeval it_interval; struct timeval it_value; }; #line 122 typedef int __itimer_which_t; #line 127 extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; #line 133 extern int setitimer (__itimer_which_t __which, const struct itimerval *__restrict __new, struct itimerval *__restrict __old) ; #line 140 extern int utimes (const char *__file, const struct timeval __tvp[2]) ; #line 145 extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; #line 149 extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 87 typedef __off_t off_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/user.h" struct user { struct pt_regs regs; size_t u_tsize; size_t u_dsize; size_t u_ssize; unsigned long start_code; unsigned long start_data; unsigned long start_stack; long int signal; struct regs * u_ar0; unsigned long magic; char u_comm[32]; }; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/procfs.h" struct elf_siginfo { int si_signo; int si_code; int si_errno; }; #line 77 struct elf_prstatus { #line 84 struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; #line 92 __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; #line 103 elf_gregset_t pr_reg; int pr_fpvalid; }; #line 110 struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; __uid_t pr_uid; __gid_t pr_gid; __pid_t pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; #line 126 typedef void *psaddr_t; #line 129 typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 134 typedef __pid_t lwpid_t; #line 137 typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, #line 40 RLIMIT_FSIZE = 1, #line 44 RLIMIT_DATA = 2, #line 48 RLIMIT_STACK = 3, #line 52 RLIMIT_CORE = 4, #line 59 __RLIMIT_RSS = 5, #line 63 RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, #line 69 RLIMIT_AS = 9, #line 73 __RLIMIT_NPROC = 6, #line 77 __RLIMIT_MEMLOCK = 8, #line 81 __RLIMIT_LOCKS = 10, #line 85 __RLIMIT_SIGPENDING = 11, #line 89 __RLIMIT_MSGQUEUE = 12, #line 95 __RLIMIT_NICE = 13, #line 100 __RLIMIT_RTPRIO = 14, #line 103 __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS #line 107 }; #line 127 typedef __rlim_t rlim_t; #line 135 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 154 enum __rusage_who { RUSAGE_SELF = 0, #line 161 RUSAGE_CHILDREN = -1 #line 172 }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 178 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; #line 188 long int ru_ixrss; long int ru_idrss; long int ru_isrss; #line 195 long int ru_minflt; long int ru_majflt; long int ru_nswap; #line 202 long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; #line 214 long int ru_nvcsw; #line 217 long int ru_nivcsw; }; #line 226 enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/resource.h" typedef __id_t id_t; #line 43 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; #line 51 extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 70 extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 88 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; #line 94 extern int getpriority (__priority_which_t __which, id_t __who) ; #line 98 extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; #line 49 extern clock_t times (struct tms *__buffer) ; Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/utsname.h" struct utsname { char sysname[65]; #line 55 char nodename[65]; #line 58 char release[65]; char version[65]; #line 63 char machine[65]; #line 70 char __domainname[65]; #line 73 }; #line 82 extern int uname (struct utsname *__name) ; Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) ; #line 49 extern void *memmove (void *__dest, const void *__src, size_t __n) ; #line 57 extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) ; #line 65 extern void *memset (void *__s, int __c, size_t __n) ; #line 68 extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 95 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__pure__)) ; #line 128 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 136 extern char *strcat (char *__restrict __dest, const char *__restrict __src) ; extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 143 extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 150 extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 165 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__pure__)) ; extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) ; #line 175 extern char *strdup (const char *__s) __attribute__ ((__malloc__)) ; #line 183 extern char *strndup (const char *__string, size_t __n) __attribute__ ((__malloc__)) ; #line 235 extern char *strchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 262 extern char *strrchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 284 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__pure__)) ; #line 288 extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 314 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 342 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__pure__)) ; #line 348 extern char *strtok (char *__restrict __s, const char *__restrict __delim) ; #line 354 extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; #line 399 extern size_t strlen (const char *__s) __attribute__ ((__pure__)) ; #line 406 extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__pure__)) ; #line 413 extern char *strerror (int __errnum) ; #line 427 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) _Pragma("map(strerror_r, \"__xpg_strerror_r\")") ; #line 445 extern char *strerror_l (int __errnum, __locale_t __l) ; #line 451 extern void __bzero (void *__s, size_t __n) ; #line 455 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 459 extern void bzero (void *__s, size_t __n) ; #line 462 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 489 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 517 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 523 extern int ffs (int __i) __attribute__ ((const)); #line 536 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; #line 540 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 559 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) ; #line 566 extern char *strsignal (int __sig) ; #line 569 extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) ; #line 576 extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 68 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 98 typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) ; #line 145 extern double atof (const char *__nptr) __attribute__ ((__pure__)) ; extern int atoi (const char *__nptr) __attribute__ ((__pure__)) ; extern long int atol (const char *__nptr) __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__pure__)) ; #line 165 extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) ; #line 173 extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) ; extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) ; #line 184 extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 195 __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 209 __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 311 extern char *l64a (long int __n) ; #line 314 extern long int a64l (const char *__s) __attribute__ ((__pure__)) ; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 327 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int random (void) ; #line 330 extern void srandom (unsigned int __seed) ; #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; #line 341 extern char *setstate (char *__statebuf) ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) ; #line 380 extern int rand (void) ; extern void srand (unsigned int __seed) ; #line 387 extern int rand_r (unsigned int *__seed) ; #line 395 extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; #line 399 extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; #line 404 extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; #line 409 extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; #line 471 extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) ; #line 493 extern void cfree (void *__ptr) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern void *alloca (size_t __size) ; #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; #line 514 extern void abort (void) __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; #line 544 extern void exit (int __status) __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) __attribute__ ((__noreturn__)); #line 567 extern char *getenv (const char *__name) ; #line 572 extern char *__secure_getenv (const char *__name) ; #line 579 extern int putenv (char *__string) ; #line 585 extern int setenv (const char *__name, const char *__value, int __replace) ; #line 589 extern int unsetenv (const char *__name) ; #line 596 extern int clearenv (void) ; #line 606 extern char *mktemp (char *__template) ; #line 620 extern int mkstemp (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) ; #line 717 extern int system (const char *__command) ; #line 734 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) ; #line 742 typedef int (*__compar_fn_t) (const void *, const void *); #line 755 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 771 extern int abs (int __x) __attribute__ ((const)) ; extern long int labs (long int __x) __attribute__ ((const)) ; #line 776 __extension__ extern long long int llabs (long long int __x) __attribute__ ((const)) ; #line 785 extern div_t div (int __numer, int __denom) __attribute__ ((const)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((const)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((const)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; #line 860 extern int mblen (const char *__s, size_t __n) ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) ; extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) ; #line 885 extern int rpmatch (const char *__response) ; #line 896 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) ; #line 948 extern int getloadavg (double __loadavg[], int __nelem) ; Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: memory.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) ; #line 49 extern void *memmove (void *__dest, const void *__src, size_t __n) ; #line 57 extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) ; #line 65 extern void *memset (void *__s, int __c, size_t __n) ; #line 68 extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 95 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__pure__)) ; #line 128 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 136 extern char *strcat (char *__restrict __dest, const char *__restrict __src) ; extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 143 extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 150 extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 165 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__pure__)) ; extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) ; #line 175 extern char *strdup (const char *__s) __attribute__ ((__malloc__)) ; #line 183 extern char *strndup (const char *__string, size_t __n) __attribute__ ((__malloc__)) ; #line 235 extern char *strchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 262 extern char *strrchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 284 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__pure__)) ; #line 288 extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 314 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 342 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__pure__)) ; #line 348 extern char *strtok (char *__restrict __s, const char *__restrict __delim) ; #line 354 extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; #line 399 extern size_t strlen (const char *__s) __attribute__ ((__pure__)) ; #line 406 extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__pure__)) ; #line 413 extern char *strerror (int __errnum) ; #line 427 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) _Pragma("map(strerror_r, \"__xpg_strerror_r\")") ; #line 445 extern char *strerror_l (int __errnum, __locale_t __l) ; #line 451 extern void __bzero (void *__s, size_t __n) ; #line 455 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 459 extern void bzero (void *__s, size_t __n) ; #line 462 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 489 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 517 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 523 extern int ffs (int __i) __attribute__ ((const)); #line 536 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; #line 540 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 559 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) ; #line 566 extern char *strsignal (int __sig) ; #line 569 extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) ; #line 576 extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; Defined "HAVE_MEMORY_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 104 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __sig_atomic_t sig_atomic_t; #line 50 typedef __sigset_t sigset_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __pid_t pid_t; #line 68 typedef __uid_t uid_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 51 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; #line 63 struct { __pid_t si_pid; __uid_t si_uid; } _kill; #line 70 struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; #line 78 struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; #line 86 struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; #line 96 struct { void *si_addr; } _sigfault; #line 102 struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 129 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; #line 153 enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; #line 174 enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; #line 195 enum { SEGV_MAPERR = 1, SEGV_ACCERR }; #line 204 enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; #line 215 enum { TRAP_BRKPT = 1, TRAP_TRACE }; #line 224 enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; #line 241 enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; #line 273 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; #line 285 __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; #line 300 enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, #line 309 SIGEV_THREAD_ID = 4 }; #line 84 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef void (*__sighandler_t) (int); #line 89 extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; #line 101 extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 126 extern int kill (__pid_t __pid, int __sig) ; #line 133 extern int killpg (__pid_t __pgrp, int __sig) ; #line 138 extern int raise (int __sig) ; #line 143 extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; #line 150 extern void psignal (int __sig, const char *__s); #line 155 extern void psiginfo (const siginfo_t *__pinfo, const char *__s); #line 168 extern int __sigpause (int __sig_or_mask, int __is_sig); #line 196 extern int sigblock (int __mask) __attribute__ ((__deprecated__)); #line 199 extern int sigsetmask (int __mask) __attribute__ ((__deprecated__)); #line 202 extern int siggetmask (void) __attribute__ ((__deprecated__)); #line 216 typedef __sighandler_t sig_t; #line 222 extern int sigemptyset (sigset_t *__set) ; #line 225 extern int sigfillset (sigset_t *__set) ; #line 228 extern int sigaddset (sigset_t *__set, int __signo) ; #line 231 extern int sigdelset (sigset_t *__set, int __signo) ; #line 234 extern int sigismember (const sigset_t *__set, int __signo) ; #line 25 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigaction.h" struct sigaction { #line 29 union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; #line 44 __sigset_t sa_mask; #line 47 int sa_flags; #line 50 void (*sa_restorer) (void); }; #line 255 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) ; #line 263 extern int sigsuspend (const sigset_t *__set) ; #line 266 extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) ; #line 270 extern int sigpending (sigset_t *__set) ; #line 277 extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) ; #line 285 extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) ; #line 293 extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) ; #line 300 extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; #line 310 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; #line 314 struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; #line 334 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/ptrace.h" struct pt_regs { unsigned long gpr[32]; unsigned long nip; unsigned long msr; unsigned long orig_gpr3; unsigned long ctr; unsigned long link; unsigned long xer; unsigned long ccr; unsigned long softe; #line 44 unsigned long trap; #line 47 unsigned long dar; unsigned long dsisr; unsigned long result; }; #line 19 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm-generic/int-l64.h" typedef signed char __s8; typedef unsigned char __u8; typedef signed short __s16; typedef unsigned short __u16; typedef signed int __s32; typedef unsigned int __u32; typedef signed long __s64; typedef unsigned long __u64; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/types.h" typedef unsigned int umode_t; #line 36 typedef struct { __u32 u[4]; } __attribute__((aligned(16))) __vector128; #line 36 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/posix_types.h" typedef struct { unsigned long fds_bits [(1024/(8 * sizeof(unsigned long)))]; } __kernel_fd_set; #line 41 typedef void (*__kernel_sighandler_t)(int); #line 44 typedef int __kernel_key_t; typedef int __kernel_mqd_t; #line 10 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/posix_types.h" typedef unsigned long __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef long __kernel_off_t; typedef int __kernel_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef long __kernel_ptrdiff_t; typedef long __kernel_time_t; typedef long __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef long __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; typedef unsigned int __kernel_old_uid_t; typedef unsigned int __kernel_old_gid_t; #line 32 typedef unsigned long __kernel_nlink_t; typedef int __kernel_ipc_pid_t; typedef unsigned long __kernel_size_t; typedef long __kernel_ssize_t; typedef unsigned long __kernel_old_dev_t; #line 46 typedef long long __kernel_loff_t; #line 53 typedef struct { int val[2]; } __kernel_fsid_t; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/types.h" typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; #line 95 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/elf.h" typedef unsigned long elf_greg_t64; typedef elf_greg_t64 elf_gregset_t64[48]; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[48]; typedef elf_gregset_t32 compat_elf_gregset_t; #line 123 typedef elf_greg_t64 elf_greg_t; typedef elf_gregset_t64 elf_gregset_t; #line 132 typedef double elf_fpreg_t; typedef elf_fpreg_t elf_fpregset_t[33]; #line 154 typedef __vector128 elf_vrreg_t; typedef elf_vrreg_t elf_vrregset_t[34]; typedef elf_vrreg_t elf_vrregset_t32[33]; typedef elf_fpreg_t elf_vsrreghalf_t32[32]; #line 300 struct ppc64_opd_entry { unsigned long funcaddr; unsigned long r2; }; #line 16 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/sigcontext.h" struct sigcontext { unsigned long _unused[4]; int signal; int _pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; elf_gregset_t gp_regs; elf_fpregset_t fp_regs; #line 82 elf_vrreg_t *v_regs; long vmx_reserve[34+34+32+1]; }; #line 342 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 354 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; #line 34 enum { SS_ONSTACK = 1, SS_DISABLE }; #line 50 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 78 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/ucontext.h" typedef unsigned long gregset_t[48]; typedef double fpregset_t[33]; #line 84 typedef struct _libc_vscr { unsigned int __pad[3]; unsigned int vscr_word; } vscr_t; #line 92 typedef struct _libc_vrstate { unsigned int vrregs[32][4]; vscr_t vscr; unsigned int vrsave; unsigned int __pad[3]; } vrregset_t __attribute__((__aligned__(16))); typedef struct { unsigned long __unused[4]; int signal; int __pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; gregset_t gp_regs; fpregset_t fp_regs; #line 128 vrregset_t *v_regs; #line 132 long vmx_reserve[34+34+32+1]; } mcontext_t; #line 138 typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; #line 175 sigset_t uc_sigmask; mcontext_t uc_mcontext; } ucontext_t; #line 365 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__deprecated__)); #line 370 extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask); #line 36 extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 402 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, #line 40 RLIMIT_FSIZE = 1, #line 44 RLIMIT_DATA = 2, #line 48 RLIMIT_STACK = 3, #line 52 RLIMIT_CORE = 4, #line 59 __RLIMIT_RSS = 5, #line 63 RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, #line 69 RLIMIT_AS = 9, #line 73 __RLIMIT_NPROC = 6, #line 77 __RLIMIT_MEMLOCK = 8, #line 81 __RLIMIT_LOCKS = 10, #line 85 __RLIMIT_SIGPENDING = 11, #line 89 __RLIMIT_MSGQUEUE = 12, #line 95 __RLIMIT_NICE = 13, #line 100 __RLIMIT_RTPRIO = 14, #line 103 __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS #line 107 }; #line 127 typedef __rlim_t rlim_t; #line 135 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 154 enum __rusage_who { RUSAGE_SELF = 0, #line 161 RUSAGE_CHILDREN = -1 #line 172 }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 178 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; #line 188 long int ru_ixrss; long int ru_idrss; long int ru_isrss; #line 195 long int ru_minflt; long int ru_majflt; long int ru_nswap; #line 202 long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; #line 214 long int ru_nvcsw; #line 217 long int ru_nivcsw; }; #line 226 enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/resource.h" typedef __id_t id_t; #line 43 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; #line 51 extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 70 extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 88 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; #line 94 extern int getpriority (__priority_which_t __which, id_t __who) ; #line 98 extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 63 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/wait.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 102 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; #line 116 extern __pid_t wait (__WAIT_STATUS __stat_loc); #line 139 extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 155 extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); #line 162 struct rusage; #line 169 extern __pid_t wait3 (__WAIT_STATUS __stat_loc, int __options, struct rusage * __usage) ; #line 175 extern __pid_t wait4 (__pid_t __pid, __WAIT_STATUS __stat_loc, int __options, struct rusage *__usage) ; Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; #line 32 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; #line 97 typedef uint16_t in_port_t; #line 100 enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, #line 122 IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, #line 128 IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, #line 133 IPPORT_RESERVED = 1024, #line 136 IPPORT_USERRESERVED = 5000 }; #line 141 typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; #line 198 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; #line 213 }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; #line 225 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; #line 232 unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; #line 239 struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; #line 251 struct ip_mreq { struct in_addr imr_multiaddr; #line 257 struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; #line 266 struct in_addr imr_interface; #line 269 struct in_addr imr_sourceaddr; }; #line 275 struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; #line 281 unsigned int ipv6mr_interface; }; #line 287 struct group_req { uint32_t gr_interface; #line 293 struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; #line 302 struct sockaddr_storage gsr_group; #line 305 struct sockaddr_storage gsr_source; }; #line 310 struct ip_msfilter { struct in_addr imsf_multiaddr; #line 316 struct in_addr imsf_interface; #line 319 uint32_t imsf_fmode; #line 322 uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; #line 331 struct group_filter { uint32_t gf_interface; #line 337 struct sockaddr_storage gf_group; #line 340 uint32_t gf_fmode; #line 343 uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 98 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; #line 105 struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; #line 113 struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 371 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((const)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((const)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((const)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((const)); #line 446 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; #line 449 extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; #line 32 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; #line 97 typedef uint16_t in_port_t; #line 100 enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, #line 122 IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, #line 128 IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, #line 133 IPPORT_RESERVED = 1024, #line 136 IPPORT_USERRESERVED = 5000 }; #line 141 typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; #line 198 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; #line 213 }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; #line 225 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; #line 232 unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; #line 239 struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; #line 251 struct ip_mreq { struct in_addr imr_multiaddr; #line 257 struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; #line 266 struct in_addr imr_interface; #line 269 struct in_addr imr_sourceaddr; }; #line 275 struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; #line 281 unsigned int ipv6mr_interface; }; #line 287 struct group_req { uint32_t gr_interface; #line 293 struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; #line 302 struct sockaddr_storage gsr_group; #line 305 struct sockaddr_storage gsr_source; }; #line 310 struct ip_msfilter { struct in_addr imsf_multiaddr; #line 316 struct in_addr imsf_interface; #line 319 uint32_t imsf_fmode; #line 322 uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; #line 331 struct group_filter { uint32_t gf_interface; #line 337 struct sockaddr_storage gf_group; #line 340 uint32_t gf_fmode; #line 343 uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 98 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; #line 105 struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; #line 113 struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 371 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((const)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((const)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((const)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((const)); #line 446 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; #line 449 extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; #line 46 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; #line 60 extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netdb.h" extern int *__h_errno_location (void) __attribute__ ((const)); #line 93 extern void herror (const char *__str) ; #line 96 extern const char *hstrerror (int __err_num) ; #line 101 struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; #line 111 }; #line 118 extern void sethostent (int __stay_open); #line 124 extern void endhostent (void); #line 131 extern struct hostent *gethostent (void); #line 138 extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); #line 145 extern struct hostent *gethostbyname (const char *__name); #line 156 extern struct hostent *gethostbyname2 (const char *__name, int __af); #line 168 extern int gethostent_r (struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyaddr_r (const void *__restrict __addr, __socklen_t __len, int __type, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname_r (const char *__restrict __name, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname2_r (const char *__restrict __name, int __af, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); #line 199 extern void setnetent (int __stay_open); #line 205 extern void endnetent (void); #line 212 extern struct netent *getnetent (void); #line 219 extern struct netent *getnetbyaddr (uint32_t __net, int __type); #line 225 extern struct netent *getnetbyname (const char *__name); #line 238 extern int getnetent_r (struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyname_r (const char *__restrict __name, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); #line 258 struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; #line 271 extern void setservent (int __stay_open); #line 277 extern void endservent (void); #line 284 extern struct servent *getservent (void); #line 291 extern struct servent *getservbyname (const char *__name, const char *__proto); #line 299 extern struct servent *getservbyport (int __port, const char *__proto); #line 310 extern int getservent_r (struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyname_r (const char *__restrict __name, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyport_r (int __port, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); #line 328 struct protoent { char *p_name; char **p_aliases; int p_proto; }; #line 340 extern void setprotoent (int __stay_open); #line 346 extern void endprotoent (void); #line 353 extern struct protoent *getprotoent (void); #line 359 extern struct protoent *getprotobyname (const char *__name); #line 365 extern struct protoent *getprotobynumber (int __proto); #line 376 extern int getprotoent_r (struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobyname_r (const char *__restrict __name, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobynumber_r (int __proto, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); #line 397 extern int setnetgrent (const char *__netgroup); #line 405 extern void endnetgrent (void); #line 414 extern int getnetgrent (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp); #line 425 extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *__domain); #line 434 extern int getnetgrent_r (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp, char *__restrict __buffer, size_t __buflen); #line 453 extern int rcmd (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p); #line 465 extern int rcmd_af (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); #line 481 extern int rexec (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p); #line 493 extern int rexec_af (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); #line 507 extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); #line 517 extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); #line 530 extern int iruserok (uint32_t __raddr, int __suser, const char *__remuser, const char *__locuser); #line 541 extern int iruserok_af (const void *__raddr, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); #line 553 extern int rresvport (int *__alport); #line 562 extern int rresvport_af (int *__alport, sa_family_t __af); #line 569 struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 664 extern int getaddrinfo (const char *__restrict __name, const char *__restrict __service, const struct addrinfo *__restrict __req, struct addrinfo **__restrict __pai); #line 670 extern void freeaddrinfo (struct addrinfo *__ai) ; #line 673 extern const char *gai_strerror (int __ecode) ; #line 679 extern int getnameinfo (const struct sockaddr *__restrict __sa, socklen_t __salen, char *__restrict __host, socklen_t __hostlen, char *__restrict __serv, socklen_t __servlen, unsigned int __flags); Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 174 typedef __pid_t pid_t; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fenv.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/fenv.h" enum { FE_INEXACT = 1 << (31 - 6), FE_DIVBYZERO = 1 << (31 - 5), FE_UNDERFLOW = 1 << (31 - 4), FE_OVERFLOW = 1 << (31 - 3), #line 43 FE_INVALID = 1 << (31 - 2), #line 97 }; #line 105 enum { FE_TONEAREST = 0, FE_TOWARDZERO = 1, FE_UPWARD = 2, FE_DOWNWARD = 3 }; #line 118 typedef unsigned int fexcept_t; #line 122 typedef double fenv_t; #line 125 extern const fenv_t __fe_dfl_env; #line 65 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/fenv.h" extern int feclearexcept (int __excepts) ; #line 69 extern int fegetexceptflag (fexcept_t *__flagp, int __excepts) ; #line 72 extern int feraiseexcept (int __excepts) ; #line 76 extern int fesetexceptflag (const fexcept_t *__flagp, int __excepts) ; #line 80 extern int fetestexcept (int __excepts) ; #line 86 extern int fegetround (void) ; #line 89 extern int fesetround (int __rounding_direction) ; #line 96 extern int fegetenv (fenv_t *__envp) ; #line 101 extern int feholdexcept (fenv_t *__envp) ; #line 105 extern int fesetenv (const fenv_t *__envp) ; #line 110 extern int feupdateenv (const fenv_t *__envp) ; Defined "HAVE_FENV_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" typedef __pid_t pid_t; #line 74 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sched.h" struct sched_param { int __sched_priority; }; #line 83 extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; #line 87 extern int unshare (int __flags) ; #line 90 extern int sched_getcpu (void) ; #line 101 struct __sched_param { int __sched_priority; }; #line 116 typedef unsigned long int __cpu_mask; #line 123 typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 201 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; #line 55 extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; #line 58 extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; #line 62 extern int sched_getscheduler (__pid_t __pid) ; #line 65 extern int sched_yield (void) ; #line 68 extern int sched_get_priority_max (int __algorithm) ; #line 71 extern int sched_get_priority_min (int __algorithm) ; #line 74 extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" typedef __pid_t pid_t; #line 74 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sched.h" struct sched_param { int __sched_priority; }; #line 83 extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; #line 87 extern int unshare (int __flags) ; #line 90 extern int sched_getcpu (void) ; #line 101 struct __sched_param { int __sched_priority; }; #line 116 typedef unsigned long int __cpu_mask; #line 123 typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 201 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; #line 55 extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; #line 58 extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; #line 62 extern int sched_getscheduler (__pid_t __pid) ; #line 65 extern int sched_yield (void) ; #line 68 extern int sched_get_priority_max (int __algorithm) ; #line 71 extern int sched_get_priority_min (int __algorithm) ; #line 74 extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/setjmp.h" typedef long int __jmp_buf[64] __attribute__ ((__aligned__ (16))); #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; #line 44 enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL #line 61 }; #line 66 enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; #line 115 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 147 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; #line 157 enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; #line 167 enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; #line 182 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; #line 191 enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; #line 225 extern int pthread_create (pthread_t *__restrict __newthread, const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) ; #line 234 extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); #line 242 extern int pthread_join (pthread_t __th, void **__thread_return); #line 263 extern int pthread_detach (pthread_t __th) ; #line 267 extern pthread_t pthread_self (void) __attribute__ ((const)); #line 270 extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; #line 278 extern int pthread_attr_init (pthread_attr_t *__attr) ; #line 281 extern int pthread_attr_destroy (pthread_attr_t *__attr) ; #line 285 extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; #line 290 extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; #line 296 extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; #line 301 extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; #line 307 extern int pthread_attr_getschedparam (const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) ; #line 313 extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, const struct sched_param *__restrict __param) ; #line 318 extern int pthread_attr_getschedpolicy (const pthread_attr_t *__restrict __attr, int *__restrict __policy) ; #line 323 extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; #line 327 extern int pthread_attr_getinheritsched (const pthread_attr_t *__restrict __attr, int *__restrict __inherit) ; #line 332 extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; #line 338 extern int pthread_attr_getscope (const pthread_attr_t *__restrict __attr, int *__restrict __scope) ; #line 343 extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; #line 347 extern int pthread_attr_getstackaddr (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__deprecated__)); #line 355 extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__deprecated__)); #line 360 extern int pthread_attr_getstacksize (const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) ; #line 367 extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; #line 373 extern int pthread_attr_getstack (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) ; #line 381 extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 413 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; #line 418 extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) ; #line 424 extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 478 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; #line 490 extern int pthread_setcancelstate (int __state, int *__oldstate); #line 494 extern int pthread_setcanceltype (int __type, int *__oldtype); #line 497 extern int pthread_cancel (pthread_t __th); #line 502 extern void pthread_testcancel (void); #line 507 typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); #line 524 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 664 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 676 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 717 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; #line 726 struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; #line 733 extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; #line 738 extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; #line 742 extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; #line 746 extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; #line 751 extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 757 extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 762 extern int pthread_mutex_getprioceiling (const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) ; #line 769 extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) ; #line 777 extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) ; #line 790 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; #line 794 extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; #line 798 extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) ; #line 804 extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 810 extern int pthread_mutexattr_gettype (const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) ; #line 817 extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) ; #line 822 extern int pthread_mutexattr_getprotocol (const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) ; #line 829 extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) ; #line 834 extern int pthread_mutexattr_getprioceiling (const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) ; #line 840 extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) ; #line 846 extern int pthread_mutexattr_getrobust (const pthread_mutexattr_t *__attr, int *__robustness) ; #line 856 extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) ; #line 872 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, const pthread_rwlockattr_t *__restrict __attr) ; #line 877 extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; #line 881 extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; #line 885 extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; #line 890 extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 896 extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; #line 900 extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; #line 905 extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 911 extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; #line 918 extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; #line 922 extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; #line 926 extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) ; #line 932 extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; #line 937 extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) ; #line 943 extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; #line 952 extern int pthread_cond_init (pthread_cond_t *__restrict __cond, const pthread_condattr_t *__restrict __cond_attr) ; #line 957 extern int pthread_cond_destroy (pthread_cond_t *__cond) ; #line 961 extern int pthread_cond_signal (pthread_cond_t *__cond) ; #line 965 extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; #line 973 extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) ; #line 984 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 992 extern int pthread_condattr_init (pthread_condattr_t *__attr) ; #line 996 extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; #line 1000 extern int pthread_condattr_getpshared (const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1006 extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; #line 1011 extern int pthread_condattr_getclock (const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) ; #line 1017 extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; #line 1028 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; #line 1032 extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; #line 1036 extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; #line 1040 extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; #line 1044 extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; #line 1052 extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, const pthread_barrierattr_t *__restrict __attr, unsigned int __count) ; #line 1058 extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; #line 1062 extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; #line 1067 extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; #line 1071 extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; #line 1075 extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1081 extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; #line 1095 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; #line 1100 extern int pthread_key_delete (pthread_key_t __key) ; #line 1103 extern void *pthread_getspecific (pthread_key_t __key) ; #line 1106 extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; #line 1112 extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; #line 1129 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 150 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; #line 161 __pid_t l_pid; }; #line 143 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/stat.h" struct stat { __dev_t st_dev; __ino_t st_ino; #line 151 __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad2; __dev_t st_rdev; __off_t st_size; #line 162 __blksize_t st_blksize; #line 165 __blkcnt_t st_blocks; #line 176 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 190 unsigned long int __unused4; unsigned long int __unused5; unsigned long int __unused6; }; #line 122 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); #line 131 extern int open (const char *__file, int __oflag, ...) ; #line 155 extern int openat (int __fd, const char *__file, int __oflag, ...) ; #line 177 extern int creat (const char *__file, __mode_t __mode) ; #line 206 extern int lockf (int __fd, int __cmd, __off_t __len); #line 223 extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 245 extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 149 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef long int ptrdiff_t; #line 211 typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" struct _IO_FILE; #line 49 typedef struct _IO_FILE FILE; #line 65 typedef struct _IO_FILE __FILE; #line 83 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/wchar.h" typedef struct { int __count; union { unsigned int __wch; #line 93 char __wchb[4]; } __value; } __mbstate_t; #line 22 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 53 typedef int _G_int16_t __attribute__ ((__mode__ (__HI__))); typedef int _G_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int _G_uint16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int _G_uint32_t __attribute__ ((__mode__ (__SI__))); #line 70 "/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/include/stdarg.h" typedef __builtin_va_list __gnuc_va_list; #line 79 typedef __builtin_va_list va_list; #line 170 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 typedef void _IO_lock_t; #line 186 struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; #line 192 int _pos; #line 203 }; #line 206 enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 271 struct _IO_FILE { int _flags; #line 277 char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; #line 298 int _flags2; __off_t _old_offset; #line 304 unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; #line 310 _IO_lock_t *_lock; #line 319 __off64_t _offset; #line 328 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; #line 341 typedef struct _IO_FILE _IO_FILE; #line 344 struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 364 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); #line 372 typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); #line 381 typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); #line 384 typedef int __io_close_fn (void *__cookie); #line 416 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 460 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); #line 471 extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 490 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 91 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" typedef __off_t off_t; #line 103 typedef __ssize_t ssize_t; #line 111 typedef _G_fpos_t fpos_t; #line 165 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; #line 175 extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; #line 182 extern int renameat (int __oldfd, const char *__old, int __newfd, const char *__new) ; #line 192 extern FILE *tmpfile (void) ; #line 206 extern char *tmpnam (char *__s) ; #line 212 extern char *tmpnam_r (char *__s) ; #line 224 extern char *tempnam (const char *__dir, const char *__pfx) __attribute__ ((__malloc__)) ; #line 234 extern int fclose (FILE *__stream); #line 239 extern int fflush (FILE *__stream); #line 249 extern int fflush_unlocked (FILE *__stream); #line 269 extern FILE *fopen (const char *__restrict __filename, const char *__restrict __modes) ; #line 275 extern FILE *freopen (const char *__restrict __filename, const char *__restrict __modes, FILE *__restrict __stream) ; #line 303 extern FILE *fdopen (int __fd, const char *__modes) ; #line 316 extern FILE *fmemopen (void *__s, size_t __len, const char *__modes) ; #line 322 extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) ; #line 329 extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) ; #line 333 extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) ; #line 340 extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) ; #line 344 extern void setlinebuf (FILE *__stream) ; #line 353 extern int fprintf (FILE *__restrict __stream, const char *__restrict __format, ...); #line 359 extern int printf (const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, const char *__restrict __format, ...) ; #line 368 extern int vfprintf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg); #line 374 extern int vprintf (const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) ; #line 383 extern int snprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, ...) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 3, 0))); #line 414 extern int vdprintf (int __fd, const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); #line 427 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) ; #line 433 extern int scanf (const char *__restrict __format, ...) ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) ; #line 445 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) _Pragma("map(fscanf, \"__isoc99_fscanf\")") ; extern int scanf (const char *__restrict __format, ...) _Pragma("map(scanf, \"__isoc99_scanf\")") ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) _Pragma("map(sscanf, \"__isoc99_sscanf\")"); #line 473 extern int vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; #line 481 extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; #line 485 extern int vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))); #line 496 extern int #line 499 vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vfscanf, \"__isoc99_vfscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vscanf, \"__isoc99_vscanf\")") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int #line 507 vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vsscanf, \"__isoc99_vsscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))); #line 533 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); #line 540 extern int getchar (void); #line 552 extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); #line 563 extern int fgetc_unlocked (FILE *__stream); #line 575 extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); #line 582 extern int putchar (int __c); #line 596 extern int fputc_unlocked (int __c, FILE *__stream); #line 604 extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); #line 612 extern int getw (FILE *__stream); #line 615 extern int putw (int __w, FILE *__stream); #line 624 extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; #line 632 extern char *gets (char *__s) ; #line 658 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; #line 671 extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; #line 682 extern int fputs (const char *__restrict __s, FILE *__restrict __stream); #line 688 extern int puts (const char *__s); #line 695 extern int ungetc (int __c, FILE *__stream); #line 702 extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 708 extern size_t fwrite (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s) ; #line 730 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 742 extern int fseek (FILE *__stream, long int __off, int __whence); #line 747 extern long int ftell (FILE *__stream) ; #line 752 extern void rewind (FILE *__stream); #line 766 extern int fseeko (FILE *__stream, __off_t __off, int __whence); #line 771 extern __off_t ftello (FILE *__stream) ; #line 791 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); #line 796 extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 819 extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; #line 828 extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; #line 839 extern void perror (const char *__s); #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 851 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" extern int fileno (FILE *__stream) ; #line 856 extern int fileno_unlocked (FILE *__stream) ; #line 866 extern FILE *popen (const char *__command, const char *__modes) ; #line 872 extern int pclose (FILE *__stream); #line 878 extern char *ctermid (char *__s) ; #line 906 extern void flockfile (FILE *__stream) ; #line 910 extern int ftrylockfile (FILE *__stream) ; #line 913 extern void funlockfile (FILE *__stream) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/malloc.h" extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; #line 54 extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 62 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); #line 66 extern void free (void *__ptr) ; #line 69 extern void cfree (void *__ptr) ; #line 72 extern void *memalign (size_t __alignment, size_t __size) __attribute__ ((__malloc__)) ; #line 76 extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 81 extern void * pvalloc (size_t __size) __attribute__ ((__malloc__)) ; #line 86 extern void *(*__morecore) (ptrdiff_t __size); #line 89 extern void *__default_morecore (ptrdiff_t __size) __attribute__ ((__malloc__)); #line 94 struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; #line 108 extern struct mallinfo mallinfo (void) ; #line 135 extern int mallopt (int __param, int __val) ; #line 139 extern int malloc_trim (size_t __pad) ; #line 143 extern size_t malloc_usable_size (void *__ptr) ; #line 146 extern void malloc_stats (void) ; #line 149 extern int malloc_info (int __options, FILE *__fp); #line 152 extern void *malloc_get_state (void) ; #line 156 extern int malloc_set_state (void *__ptr) ; #line 161 extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); #line 175 extern void __malloc_check_init (void) ; Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 39 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pwd.h" typedef __gid_t gid_t; #line 44 typedef __uid_t uid_t; #line 50 struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" struct _IO_FILE; #line 49 typedef struct _IO_FILE FILE; #line 73 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pwd.h" extern void setpwent (void); #line 79 extern void endpwent (void); #line 85 extern struct passwd *getpwent (void); #line 95 extern struct passwd *fgetpwent (FILE *__stream); #line 103 extern int putpwent (const struct passwd *__restrict __p, FILE *__restrict __f); #line 111 extern struct passwd *getpwuid (__uid_t __uid); #line 117 extern struct passwd *getpwnam (const char *__name); #line 140 extern int getpwent_r (struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); #line 145 extern int getpwuid_r (__uid_t __uid, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwnam_r (const char *__restrict __name, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); #line 164 extern int fgetpwent_r (FILE *__restrict __stream, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/search.h" extern void insque (void *__elem, void *__prev) ; #line 48 extern void remque (void *__elem) ; #line 55 typedef int (*__compar_fn_t) (const void *, const void *); #line 63 typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; #line 78 struct _ENTRY; #line 88 extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; #line 91 extern int hcreate (size_t __nel) ; #line 94 extern void hdestroy (void) ; #line 119 typedef enum { preorder, postorder, endorder, leaf } VISIT; #line 130 extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); #line 135 extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); #line 139 extern void *tdelete (const void *__restrict __key, void **__restrict __rootp, __compar_fn_t __compar); #line 145 typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); #line 151 extern void twalk (const void *__root, __action_fn_t __action); #line 165 extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 170 extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)); #line 45 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 48 extern void bzero (void *__s, size_t __n) ; #line 74 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 102 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 110 extern int ffs (int __i) __attribute__ ((const)); #line 114 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)); #line 118 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)); #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 129 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/strings.h" extern int strcasecmp_l (const char *__s1, const char *__s2, __locale_t __loc) __attribute__ ((__pure__)) ; extern int strncasecmp_l (const char *__s1, const char *__s2, size_t __n, __locale_t __loc) __attribute__ ((__pure__)) ; Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 221 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" typedef __ssize_t ssize_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 233 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" typedef __gid_t gid_t; #line 238 typedef __uid_t uid_t; #line 244 typedef __off_t off_t; #line 256 typedef __useconds_t useconds_t; #line 261 typedef __pid_t pid_t; #line 268 typedef __intptr_t intptr_t; #line 275 typedef __socklen_t socklen_t; #line 288 extern int access (const char *__name, int __type) ; #line 305 extern int faccessat (int __fd, const char *__file, int __type, int __flag) ; #line 331 extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 350 extern int close (int __fd); #line 357 extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; #line 363 extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 373 extern ssize_t pread (int __fd, void *__buf, size_t __nbytes, __off_t __offset) ; #line 381 extern ssize_t pwrite (int __fd, const void *__buf, size_t __n, __off_t __offset) ; #line 414 extern int pipe (int __pipedes[2]) ; #line 429 extern unsigned int alarm (unsigned int __seconds) ; #line 441 extern unsigned int sleep (unsigned int __seconds); #line 449 extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; #line 457 extern int usleep (__useconds_t __useconds); #line 466 extern int pause (void); #line 470 extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 475 extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; #line 480 extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 488 extern int fchownat (int __fd, const char *__file, __uid_t __owner, __gid_t __group, int __flag) ; #line 494 extern int chdir (const char *__path) ; #line 498 extern int fchdir (int __fd) ; #line 508 extern char *getcwd (char *__buf, size_t __size) ; #line 522 extern char *getwd (char *__buf) __attribute__ ((__deprecated__)) ; #line 528 extern int dup (int __fd) ; #line 531 extern int dup2 (int __fd, int __fd2) ; #line 540 extern char **__environ; #line 548 extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 554 extern int fexecve (int __fd, char *const __argv[], char *const __envp[]) ; #line 560 extern int execv (const char *__path, char *const __argv[]) ; #line 565 extern int execle (const char *__path, const char *__arg, ...) ; #line 570 extern int execl (const char *__path, const char *__arg, ...) ; #line 575 extern int execvp (const char *__file, char *const __argv[]) ; #line 581 extern int execlp (const char *__file, const char *__arg, ...) ; #line 595 extern int nice (int __inc) ; #line 600 extern void _exit (int __status) __attribute__ ((__noreturn__)); #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; #line 73 enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, #line 138 _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, #line 151 _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, #line 172 _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, #line 187 _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, #line 219 _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, #line 252 _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, #line 265 _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, #line 278 _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, #line 285 _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, #line 292 _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, #line 329 _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, #line 342 _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, #line 351 _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, #line 358 _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, #line 447 _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, #line 456 _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, #line 467 _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, #line 499 _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, #line 504 _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, #line 513 _SC_SS_REPL_MAX, #line 516 _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, #line 525 _SC_XOPEN_STREAMS, #line 528 _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; #line 535 enum { _CS_PATH, #line 540 _CS_V6_WIDTH_RESTRICTED_ENVS, #line 544 _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, #line 549 _CS_V5_WIDTH_RESTRICTED_ENVS, #line 553 _CS_V7_WIDTH_RESTRICTED_ENVS, #line 557 _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, #line 574 _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, #line 607 _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, #line 640 _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS, #line 673 _CS_V6_ENV, _CS_V7_ENV }; #line 609 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" extern long int pathconf (const char *__path, int __name) ; #line 613 extern long int fpathconf (int __fd, int __name) ; #line 616 extern long int sysconf (int __name) ; #line 620 extern size_t confstr (int __name, char *__buf, size_t __len) ; #line 625 extern __pid_t getpid (void) ; #line 628 extern __pid_t getppid (void) ; #line 633 extern __pid_t getpgrp (void) ; #line 643 extern __pid_t __getpgid (__pid_t __pid) ; extern __pid_t getpgid (__pid_t __pid) ; #line 652 extern int setpgid (__pid_t __pid, __pid_t __pgid) ; #line 669 extern int setpgrp (void) ; #line 686 extern __pid_t setsid (void) ; #line 690 extern __pid_t getsid (__pid_t __pid) ; #line 694 extern __uid_t getuid (void) ; #line 697 extern __uid_t geteuid (void) ; #line 700 extern __gid_t getgid (void) ; #line 703 extern __gid_t getegid (void) ; #line 708 extern int getgroups (int __size, __gid_t __list[]) ; #line 719 extern int setuid (__uid_t __uid) ; #line 724 extern int setreuid (__uid_t __ruid, __uid_t __euid) ; #line 729 extern int seteuid (__uid_t __uid) ; #line 736 extern int setgid (__gid_t __gid) ; #line 741 extern int setregid (__gid_t __rgid, __gid_t __egid) ; #line 746 extern int setegid (__gid_t __gid) ; #line 775 extern __pid_t fork (void) ; #line 783 extern __pid_t vfork (void) ; #line 789 extern char *ttyname (int __fd) ; #line 793 extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; #line 798 extern int isatty (int __fd) ; #line 804 extern int ttyslot (void) ; #line 809 extern int link (const char *__from, const char *__to) ; #line 815 extern int linkat (int __fromfd, const char *__from, int __tofd, const char *__to, int __flags) ; #line 822 extern int symlink (const char *__from, const char *__to) ; #line 828 extern ssize_t readlink (const char *__restrict __path, char *__restrict __buf, size_t __len) ; #line 835 extern int symlinkat (const char *__from, int __tofd, const char *__to) ; #line 839 extern ssize_t readlinkat (int __fd, const char *__restrict __path, char *__restrict __buf, size_t __len) ; #line 845 extern int unlink (const char *__name) ; #line 849 extern int unlinkat (int __fd, const char *__name, int __flag) ; #line 854 extern int rmdir (const char *__path) ; #line 858 extern __pid_t tcgetpgrp (int __fd) ; #line 861 extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; #line 868 extern char *getlogin (void); #line 876 extern int getlogin_r (char *__name, size_t __name_len) ; #line 881 extern int setlogin (const char *__name) ; #line 59 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/getopt.h" extern char *optarg; #line 73 extern int optind; #line 78 extern int opterr; #line 82 extern int optopt; #line 152 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 898 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/unistd.h" extern int gethostname (char *__name, size_t __len) ; #line 905 extern int sethostname (const char *__name, size_t __len) ; #line 910 extern int sethostid (long int __id) ; #line 916 extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; #line 925 extern int vhangup (void) ; #line 928 extern int revoke (const char *__file) ; #line 936 extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; #line 944 extern int acct (const char *__name) ; #line 948 extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; #line 956 extern int daemon (int __nochdir, int __noclose) ; #line 963 extern int chroot (const char *__path) ; #line 967 extern char *getpass (const char *__prompt) ; #line 976 extern int fsync (int __fd); #line 983 extern long int gethostid (void); #line 986 extern void sync (void) ; #line 992 extern int getpagesize (void) __attribute__ ((const)); #line 997 extern int getdtablesize (void) ; #line 1007 extern int truncate (const char *__file, __off_t __length) ; #line 1026 extern int ftruncate (int __fd, __off_t __length) ; #line 1047 extern int brk (void *__addr) ; #line 1053 extern void *sbrk (intptr_t __delta) ; #line 1068 extern long int syscall (long int __sysno, ...) ; #line 1091 extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1122 extern int fdatasync (int __fildes); #line 1151 extern char *ctermid (char *__s) ; Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 11 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 60 struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; #line 34 extern int get_nprocs_conf (void) ; #line 37 extern int get_nprocs (void) ; #line 41 extern long int get_phys_pages (void) ; #line 44 extern long int get_avphys_pages (void) ; Possible ERROR while running preprocessor: "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. error message = {"/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 104 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __sig_atomic_t sig_atomic_t; #line 50 typedef __sigset_t sigset_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __pid_t pid_t; #line 68 typedef __uid_t uid_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 51 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; #line 63 struct { __pid_t si_pid; __uid_t si_uid; } _kill; #line 70 struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; #line 78 struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; #line 86 struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; #line 96 struct { void *si_addr; } _sigfault; #line 102 struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 129 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; #line 153 enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; #line 174 enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; #line 195 enum { SEGV_MAPERR = 1, SEGV_ACCERR }; #line 204 enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; #line 215 enum { TRAP_BRKPT = 1, TRAP_TRACE }; #line 224 enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; #line 241 enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; #line 273 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; #line 285 __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; #line 300 enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, #line 309 SIGEV_THREAD_ID = 4 }; #line 84 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef void (*__sighandler_t) (int); #line 89 extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; #line 101 extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 126 extern int kill (__pid_t __pid, int __sig) ; #line 133 extern int killpg (__pid_t __pgrp, int __sig) ; #line 138 extern int raise (int __sig) ; #line 143 extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; #line 150 extern void psignal (int __sig, const char *__s); #line 155 extern void psiginfo (const siginfo_t *__pinfo, const char *__s); #line 168 extern int __sigpause (int __sig_or_mask, int __is_sig); #line 196 extern int sigblock (int __mask) __attribute__ ((__deprecated__)); #line 199 extern int sigsetmask (int __mask) __attribute__ ((__deprecated__)); #line 202 extern int siggetmask (void) __attribute__ ((__deprecated__)); #line 216 typedef __sighandler_t sig_t; #line 222 extern int sigemptyset (sigset_t *__set) ; #line 225 extern int sigfillset (sigset_t *__set) ; #line 228 extern int sigaddset (sigset_t *__set, int __signo) ; #line 231 extern int sigdelset (sigset_t *__set, int __signo) ; #line 234 extern int sigismember (const sigset_t *__set, int __signo) ; #line 25 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigaction.h" struct sigaction { #line 29 union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; #line 44 __sigset_t sa_mask; #line 47 int sa_flags; #line 50 void (*sa_restorer) (void); }; #line 255 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) ; #line 263 extern int sigsuspend (const sigset_t *__set) ; #line 266 extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) ; #line 270 extern int sigpending (sigset_t *__set) ; #line 277 extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) ; #line 285 extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) ; #line 293 extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) ; #line 300 extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; #line 310 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; #line 314 struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; #line 334 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/ptrace.h" struct pt_regs { unsigned long gpr[32]; unsigned long nip; unsigned long msr; unsigned long orig_gpr3; unsigned long ctr; unsigned long link; unsigned long xer; unsigned long ccr; unsigned long softe; #line 44 unsigned long trap; #line 47 unsigned long dar; unsigned long dsisr; unsigned long result; }; #line 19 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm-generic/int-l64.h" typedef signed char __s8; typedef unsigned char __u8; typedef signed short __s16; typedef unsigned short __u16; typedef signed int __s32; typedef unsigned int __u32; typedef signed long __s64; typedef unsigned long __u64; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/types.h" typedef unsigned int umode_t; #line 36 typedef struct { __u32 u[4]; } __attribute__((aligned(16))) __vector128; #line 36 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/posix_types.h" typedef struct { unsigned long fds_bits [(1024/(8 * sizeof(unsigned long)))]; } __kernel_fd_set; #line 41 typedef void (*__kernel_sighandler_t)(int); #line 44 typedef int __kernel_key_t; typedef int __kernel_mqd_t; #line 10 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/posix_types.h" typedef unsigned long __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef long __kernel_off_t; typedef int __kernel_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef long __kernel_ptrdiff_t; typedef long __kernel_time_t; typedef long __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef long __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; typedef unsigned int __kernel_old_uid_t; typedef unsigned int __kernel_old_gid_t; #line 32 typedef unsigned long __kernel_nlink_t; typedef int __kernel_ipc_pid_t; typedef unsigned long __kernel_size_t; typedef long __kernel_ssize_t; typedef unsigned long __kernel_old_dev_t; #line 46 typedef long long __kernel_loff_t; #line 53 typedef struct { int val[2]; } __kernel_fsid_t; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/types.h" typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; #line 95 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/elf.h" typedef unsigned long elf_greg_t64; typedef elf_greg_t64 elf_gregset_t64[48]; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[48]; typedef elf_gregset_t32 compat_elf_gregset_t; #line 123 typedef elf_greg_t64 elf_greg_t; typedef elf_gregset_t64 elf_gregset_t; #line 132 typedef double elf_fpreg_t; typedef elf_fpreg_t elf_fpregset_t[33]; #line 154 typedef __vector128 elf_vrreg_t; typedef elf_vrreg_t elf_vrregset_t[34]; typedef elf_vrreg_t elf_vrregset_t32[33]; typedef elf_fpreg_t elf_vsrreghalf_t32[32]; #line 300 struct ppc64_opd_entry { unsigned long funcaddr; unsigned long r2; }; #line 16 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/sigcontext.h" struct sigcontext { unsigned long _unused[4]; int signal; int _pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; elf_gregset_t gp_regs; elf_fpregset_t fp_regs; #line 82 elf_vrreg_t *v_regs; long vmx_reserve[34+34+32+1]; }; #line 342 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 354 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; #line 34 enum { SS_ONSTACK = 1, SS_DISABLE }; #line 50 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 78 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/ucontext.h" typedef unsigned long gregset_t[48]; typedef double fpregset_t[33]; #line 84 typedef struct _libc_vscr { unsigned int __pad[3]; unsigned int vscr_word; } vscr_t; #line 92 typedef struct _libc_vrstate { unsigned int vrregs[32][4]; vscr_t vscr; unsigned int vrsave; unsigned int __pad[3]; } vrregset_t __attribute__((__aligned__(16))); typedef struct { unsigned long __unused[4]; int signal; int __pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; gregset_t gp_regs; fpregset_t fp_regs; #line 128 vrregset_t *v_regs; #line 132 long vmx_reserve[34+34+32+1]; } mcontext_t; #line 138 typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; #line 175 sigset_t uc_sigmask; mcontext_t uc_mcontext; } ucontext_t; #line 365 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__deprecated__)); #line 370 extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask); #line 36 extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 402 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 57 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; #line 73 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) ; #line 79 extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; #line 87 extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; #line 93 enum __itimer_which { ITIMER_REAL = 0, #line 99 ITIMER_VIRTUAL = 1, #line 103 ITIMER_PROF = 2 }; #line 109 struct itimerval { struct timeval it_interval; struct timeval it_value; }; #line 122 typedef int __itimer_which_t; #line 127 extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; #line 133 extern int setitimer (__itimer_which_t __which, const struct itimerval *__restrict __new, struct itimerval *__restrict __old) ; #line 140 extern int utimes (const char *__file, const struct timeval __tvp[2]) ; #line 145 extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; #line 149 extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 87 typedef __off_t off_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/user.h" struct user { struct pt_regs regs; size_t u_tsize; size_t u_dsize; size_t u_ssize; unsigned long start_code; unsigned long start_data; unsigned long start_stack; long int signal; struct regs * u_ar0; unsigned long magic; char u_comm[32]; }; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/procfs.h" struct elf_siginfo { int si_signo; int si_code; int si_errno; }; #line 77 struct elf_prstatus { #line 84 struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; #line 92 __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; #line 103 elf_gregset_t pr_reg; int pr_fpvalid; }; #line 110 struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; __uid_t pr_uid; __gid_t pr_gid; __pid_t pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; #line 126 typedef void *psaddr_t; #line 129 typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 134 typedef __pid_t lwpid_t; #line 137 typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, #line 40 RLIMIT_FSIZE = 1, #line 44 RLIMIT_DATA = 2, #line 48 RLIMIT_STACK = 3, #line 52 RLIMIT_CORE = 4, #line 59 __RLIMIT_RSS = 5, #line 63 RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, #line 69 RLIMIT_AS = 9, #line 73 __RLIMIT_NPROC = 6, #line 77 __RLIMIT_MEMLOCK = 8, #line 81 __RLIMIT_LOCKS = 10, #line 85 __RLIMIT_SIGPENDING = 11, #line 89 __RLIMIT_MSGQUEUE = 12, #line 95 __RLIMIT_NICE = 13, #line 100 __RLIMIT_RTPRIO = 14, #line 103 __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS #line 107 }; #line 127 typedef __rlim_t rlim_t; #line 135 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 154 enum __rusage_who { RUSAGE_SELF = 0, #line 161 RUSAGE_CHILDREN = -1 #line 172 }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 178 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; #line 188 long int ru_ixrss; long int ru_idrss; long int ru_isrss; #line 195 long int ru_minflt; long int ru_majflt; long int ru_nswap; #line 202 long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; #line 214 long int ru_nvcsw; #line 217 long int ru_nivcsw; }; #line 226 enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/resource.h" typedef __id_t id_t; #line 43 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; #line 51 extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 70 extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 88 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; #line 94 extern int getpriority (__priority_which_t __which, id_t __who) ; #line 98 extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; #line 49 extern clock_t times (struct tms *__buffer) ; Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/utsname.h" struct utsname { char sysname[65]; #line 55 char nodename[65]; #line 58 char release[65]; char version[65]; #line 63 char machine[65]; #line 70 char __domainname[65]; #line 73 }; #line 82 extern int uname (struct utsname *__name) ; Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) ; #line 49 extern void *memmove (void *__dest, const void *__src, size_t __n) ; #line 57 extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) ; #line 65 extern void *memset (void *__s, int __c, size_t __n) ; #line 68 extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 95 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__pure__)) ; #line 128 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 136 extern char *strcat (char *__restrict __dest, const char *__restrict __src) ; extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 143 extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 150 extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 165 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__pure__)) ; extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) ; #line 175 extern char *strdup (const char *__s) __attribute__ ((__malloc__)) ; #line 183 extern char *strndup (const char *__string, size_t __n) __attribute__ ((__malloc__)) ; #line 235 extern char *strchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 262 extern char *strrchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 284 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__pure__)) ; #line 288 extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 314 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 342 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__pure__)) ; #line 348 extern char *strtok (char *__restrict __s, const char *__restrict __delim) ; #line 354 extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; #line 399 extern size_t strlen (const char *__s) __attribute__ ((__pure__)) ; #line 406 extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__pure__)) ; #line 413 extern char *strerror (int __errnum) ; #line 427 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) _Pragma("map(strerror_r, \"__xpg_strerror_r\")") ; #line 445 extern char *strerror_l (int __errnum, __locale_t __l) ; #line 451 extern void __bzero (void *__s, size_t __n) ; #line 455 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 459 extern void bzero (void *__s, size_t __n) ; #line 462 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 489 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 517 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 523 extern int ffs (int __i) __attribute__ ((const)); #line 536 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; #line 540 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 559 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) ; #line 566 extern char *strsignal (int __sig) ; #line 569 extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) ; #line 576 extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 68 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 98 typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) ; #line 145 extern double atof (const char *__nptr) __attribute__ ((__pure__)) ; extern int atoi (const char *__nptr) __attribute__ ((__pure__)) ; extern long int atol (const char *__nptr) __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__pure__)) ; #line 165 extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) ; #line 173 extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) ; extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) ; #line 184 extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 195 __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 209 __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 311 extern char *l64a (long int __n) ; #line 314 extern long int a64l (const char *__s) __attribute__ ((__pure__)) ; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 327 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int random (void) ; #line 330 extern void srandom (unsigned int __seed) ; #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; #line 341 extern char *setstate (char *__statebuf) ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) ; #line 380 extern int rand (void) ; extern void srand (unsigned int __seed) ; #line 387 extern int rand_r (unsigned int *__seed) ; #line 395 extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; #line 399 extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; #line 404 extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; #line 409 extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; #line 471 extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) ; #line 493 extern void cfree (void *__ptr) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern void *alloca (size_t __size) ; #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; #line 514 extern void abort (void) __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; #line 544 extern void exit (int __status) __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) __attribute__ ((__noreturn__)); #line 567 extern char *getenv (const char *__name) ; #line 572 extern char *__secure_getenv (const char *__name) ; #line 579 extern int putenv (char *__string) ; #line 585 extern int setenv (const char *__name, const char *__value, int __replace) ; #line 589 extern int unsetenv (const char *__name) ; #line 596 extern int clearenv (void) ; #line 606 extern char *mktemp (char *__template) ; #line 620 extern int mkstemp (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) ; #line 717 extern int system (const char *__command) ; #line 734 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) ; #line 742 typedef int (*__compar_fn_t) (const void *, const void *); #line 755 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 771 extern int abs (int __x) __attribute__ ((const)) ; extern long int labs (long int __x) __attribute__ ((const)) ; #line 776 __extension__ extern long long int llabs (long long int __x) __attribute__ ((const)) ; #line 785 extern div_t div (int __numer, int __denom) __attribute__ ((const)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((const)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((const)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; #line 860 extern int mblen (const char *__s, size_t __n) ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) ; extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) ; #line 885 extern int rpmatch (const char *__response) ; #line 896 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) ; #line 948 extern int getloadavg (double __loadavg[], int __nelem) ; Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: memory.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) ; #line 49 extern void *memmove (void *__dest, const void *__src, size_t __n) ; #line 57 extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) ; #line 65 extern void *memset (void *__s, int __c, size_t __n) ; #line 68 extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 95 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__pure__)) ; #line 128 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 136 extern char *strcat (char *__restrict __dest, const char *__restrict __src) ; extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 143 extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 150 extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 165 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/string.h" extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__pure__)) ; extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) ; #line 175 extern char *strdup (const char *__s) __attribute__ ((__malloc__)) ; #line 183 extern char *strndup (const char *__string, size_t __n) __attribute__ ((__malloc__)) ; #line 235 extern char *strchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 262 extern char *strrchr (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 284 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__pure__)) ; #line 288 extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 314 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__pure__)) ; #line 342 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__pure__)) ; #line 348 extern char *strtok (char *__restrict __s, const char *__restrict __delim) ; #line 354 extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) ; #line 399 extern size_t strlen (const char *__s) __attribute__ ((__pure__)) ; #line 406 extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__pure__)) ; #line 413 extern char *strerror (int __errnum) ; #line 427 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) _Pragma("map(strerror_r, \"__xpg_strerror_r\")") ; #line 445 extern char *strerror_l (int __errnum, __locale_t __l) ; #line 451 extern void __bzero (void *__s, size_t __n) ; #line 455 extern void bcopy (const void *__src, void *__dest, size_t __n) ; #line 459 extern void bzero (void *__s, size_t __n) ; #line 462 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 489 extern char *index (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 517 extern char *rindex (const char *__s, int __c) __attribute__ ((__pure__)) ; #line 523 extern int ffs (int __i) __attribute__ ((const)); #line 536 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__pure__)) ; #line 540 extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__pure__)) ; #line 559 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) ; #line 566 extern char *strsignal (int __sig) ; #line 569 extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) ; extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) ; #line 576 extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) ; Defined "HAVE_MEMORY_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 104 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 41 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __sig_atomic_t sig_atomic_t; #line 50 typedef __sigset_t sigset_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef __pid_t pid_t; #line 68 typedef __uid_t uid_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 51 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; #line 63 struct { __pid_t si_pid; __uid_t si_uid; } _kill; #line 70 struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; #line 78 struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; #line 86 struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; #line 96 struct { void *si_addr; } _sigfault; #line 102 struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 129 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; #line 153 enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; #line 174 enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; #line 195 enum { SEGV_MAPERR = 1, SEGV_ACCERR }; #line 204 enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; #line 215 enum { TRAP_BRKPT = 1, TRAP_TRACE }; #line 224 enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; #line 241 enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; #line 273 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; #line 285 __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; #line 300 enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, #line 309 SIGEV_THREAD_ID = 4 }; #line 84 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" typedef void (*__sighandler_t) (int); #line 89 extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; #line 101 extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 126 extern int kill (__pid_t __pid, int __sig) ; #line 133 extern int killpg (__pid_t __pgrp, int __sig) ; #line 138 extern int raise (int __sig) ; #line 143 extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; #line 150 extern void psignal (int __sig, const char *__s); #line 155 extern void psiginfo (const siginfo_t *__pinfo, const char *__s); #line 168 extern int __sigpause (int __sig_or_mask, int __is_sig); #line 196 extern int sigblock (int __mask) __attribute__ ((__deprecated__)); #line 199 extern int sigsetmask (int __mask) __attribute__ ((__deprecated__)); #line 202 extern int siggetmask (void) __attribute__ ((__deprecated__)); #line 216 typedef __sighandler_t sig_t; #line 222 extern int sigemptyset (sigset_t *__set) ; #line 225 extern int sigfillset (sigset_t *__set) ; #line 228 extern int sigaddset (sigset_t *__set, int __signo) ; #line 231 extern int sigdelset (sigset_t *__set, int __signo) ; #line 234 extern int sigismember (const sigset_t *__set, int __signo) ; #line 25 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigaction.h" struct sigaction { #line 29 union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; #line 44 __sigset_t sa_mask; #line 47 int sa_flags; #line 50 void (*sa_restorer) (void); }; #line 255 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) ; #line 263 extern int sigsuspend (const sigset_t *__set) ; #line 266 extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) ; #line 270 extern int sigpending (sigset_t *__set) ; #line 277 extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) ; #line 285 extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) ; #line 293 extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) ; #line 300 extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; #line 310 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; #line 314 struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; #line 334 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/ptrace.h" struct pt_regs { unsigned long gpr[32]; unsigned long nip; unsigned long msr; unsigned long orig_gpr3; unsigned long ctr; unsigned long link; unsigned long xer; unsigned long ccr; unsigned long softe; #line 44 unsigned long trap; #line 47 unsigned long dar; unsigned long dsisr; unsigned long result; }; #line 19 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm-generic/int-l64.h" typedef signed char __s8; typedef unsigned char __u8; typedef signed short __s16; typedef unsigned short __u16; typedef signed int __s32; typedef unsigned int __u32; typedef signed long __s64; typedef unsigned long __u64; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/types.h" typedef unsigned int umode_t; #line 36 typedef struct { __u32 u[4]; } __attribute__((aligned(16))) __vector128; #line 36 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/posix_types.h" typedef struct { unsigned long fds_bits [(1024/(8 * sizeof(unsigned long)))]; } __kernel_fd_set; #line 41 typedef void (*__kernel_sighandler_t)(int); #line 44 typedef int __kernel_key_t; typedef int __kernel_mqd_t; #line 10 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/posix_types.h" typedef unsigned long __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef long __kernel_off_t; typedef int __kernel_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef long __kernel_ptrdiff_t; typedef long __kernel_time_t; typedef long __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef long __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; typedef unsigned int __kernel_old_uid_t; typedef unsigned int __kernel_old_gid_t; #line 32 typedef unsigned long __kernel_nlink_t; typedef int __kernel_ipc_pid_t; typedef unsigned long __kernel_size_t; typedef long __kernel_ssize_t; typedef unsigned long __kernel_old_dev_t; #line 46 typedef long long __kernel_loff_t; #line 53 typedef struct { int val[2]; } __kernel_fsid_t; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/types.h" typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; #line 95 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/elf.h" typedef unsigned long elf_greg_t64; typedef elf_greg_t64 elf_gregset_t64[48]; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[48]; typedef elf_gregset_t32 compat_elf_gregset_t; #line 123 typedef elf_greg_t64 elf_greg_t; typedef elf_gregset_t64 elf_gregset_t; #line 132 typedef double elf_fpreg_t; typedef elf_fpreg_t elf_fpregset_t[33]; #line 154 typedef __vector128 elf_vrreg_t; typedef elf_vrreg_t elf_vrregset_t[34]; typedef elf_vrreg_t elf_vrregset_t32[33]; typedef elf_fpreg_t elf_vsrreghalf_t32[32]; #line 300 struct ppc64_opd_entry { unsigned long funcaddr; unsigned long r2; }; #line 16 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/asm/sigcontext.h" struct sigcontext { unsigned long _unused[4]; int signal; int _pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; elf_gregset_t gp_regs; elf_fpregset_t fp_regs; #line 82 elf_vrreg_t *v_regs; long vmx_reserve[34+34+32+1]; }; #line 342 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 354 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; #line 34 enum { SS_ONSTACK = 1, SS_DISABLE }; #line 50 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 78 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/ucontext.h" typedef unsigned long gregset_t[48]; typedef double fpregset_t[33]; #line 84 typedef struct _libc_vscr { unsigned int __pad[3]; unsigned int vscr_word; } vscr_t; #line 92 typedef struct _libc_vrstate { unsigned int vrregs[32][4]; vscr_t vscr; unsigned int vrsave; unsigned int __pad[3]; } vrregset_t __attribute__((__aligned__(16))); typedef struct { unsigned long __unused[4]; int signal; int __pad0; unsigned long handler; unsigned long oldmask; struct pt_regs *regs; gregset_t gp_regs; fpregset_t fp_regs; #line 128 vrregset_t *v_regs; #line 132 long vmx_reserve[34+34+32+1]; } mcontext_t; #line 138 typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; #line 175 sigset_t uc_sigmask; mcontext_t uc_mcontext; } ucontext_t; #line 365 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__deprecated__)); #line 370 extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask); #line 36 extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 402 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, #line 40 RLIMIT_FSIZE = 1, #line 44 RLIMIT_DATA = 2, #line 48 RLIMIT_STACK = 3, #line 52 RLIMIT_CORE = 4, #line 59 __RLIMIT_RSS = 5, #line 63 RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, #line 69 RLIMIT_AS = 9, #line 73 __RLIMIT_NPROC = 6, #line 77 __RLIMIT_MEMLOCK = 8, #line 81 __RLIMIT_LOCKS = 10, #line 85 __RLIMIT_SIGPENDING = 11, #line 89 __RLIMIT_MSGQUEUE = 12, #line 95 __RLIMIT_NICE = 13, #line 100 __RLIMIT_RTPRIO = 14, #line 103 __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS #line 107 }; #line 127 typedef __rlim_t rlim_t; #line 135 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 154 enum __rusage_who { RUSAGE_SELF = 0, #line 161 RUSAGE_CHILDREN = -1 #line 172 }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 178 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; #line 188 long int ru_ixrss; long int ru_idrss; long int ru_isrss; #line 195 long int ru_minflt; long int ru_majflt; long int ru_nswap; #line 202 long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; #line 214 long int ru_nvcsw; #line 217 long int ru_nivcsw; }; #line 226 enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/resource.h" typedef __id_t id_t; #line 43 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; #line 51 extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 70 extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 88 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; #line 94 extern int getpriority (__priority_which_t __which, id_t __who) ; #line 98 extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 63 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/wait.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 102 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; #line 116 extern __pid_t wait (__WAIT_STATUS __stat_loc); #line 139 extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 155 extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); #line 162 struct rusage; #line 169 extern __pid_t wait3 (__WAIT_STATUS __stat_loc, int __options, struct rusage * __usage) ; #line 175 extern __pid_t wait4 (__pid_t __pid, __WAIT_STATUS __stat_loc, int __options, struct rusage *__usage) ; Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; #line 32 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; #line 97 typedef uint16_t in_port_t; #line 100 enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, #line 122 IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, #line 128 IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, #line 133 IPPORT_RESERVED = 1024, #line 136 IPPORT_USERRESERVED = 5000 }; #line 141 typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; #line 198 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; #line 213 }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; #line 225 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; #line 232 unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; #line 239 struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; #line 251 struct ip_mreq { struct in_addr imr_multiaddr; #line 257 struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; #line 266 struct in_addr imr_interface; #line 269 struct in_addr imr_sourceaddr; }; #line 275 struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; #line 281 unsigned int ipv6mr_interface; }; #line 287 struct group_req { uint32_t gr_interface; #line 293 struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; #line 302 struct sockaddr_storage gsr_group; #line 305 struct sockaddr_storage gsr_source; }; #line 310 struct ip_msfilter { struct in_addr imsf_multiaddr; #line 316 struct in_addr imsf_interface; #line 319 uint32_t imsf_fmode; #line 322 uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; #line 331 struct group_filter { uint32_t gf_interface; #line 337 struct sockaddr_storage gf_group; #line 340 uint32_t gf_fmode; #line 343 uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 98 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; #line 105 struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; #line 113 struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 371 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((const)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((const)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((const)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((const)); #line 446 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; #line 449 extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 40 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; #line 51 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; #line 66 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 78 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; #line 35 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" typedef __socklen_t socklen_t; #line 40 enum __socket_type { SOCK_STREAM = 1, #line 45 SOCK_DGRAM = 2, #line 48 SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, #line 55 SOCK_DCCP = 6, SOCK_PACKET = 10, #line 65 SOCK_CLOEXEC = 02000000, #line 68 SOCK_NONBLOCK = 04000 #line 71 }; #line 29 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 174 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 187 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; #line 196 enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 209 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, #line 238 MSG_CMSG_CLOEXEC = 0x40000000 #line 242 }; #line 247 struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; #line 261 int msg_flags; }; #line 274 struct cmsghdr { size_t cmsg_len; #line 281 int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; #line 304 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 331 enum { SCM_RIGHTS = 0x01 #line 339 }; #line 411 struct linger { int l_onoff; int l_linger; }; #line 425 extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, const struct timespec *__tmo); #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; #line 54 enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 105 extern int socket (int __domain, int __type, int __protocol) ; #line 111 extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; #line 115 extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; #line 119 extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 129 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); #line 133 extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) ; #line 141 extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); #line 148 extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); #line 155 extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); #line 166 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 176 extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); #line 184 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); #line 190 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) ; #line 197 extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; #line 204 extern int listen (int __fd, int __n) ; #line 214 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); #line 232 extern int shutdown (int __fd, int __how) ; #line 237 extern int sockatmark (int __fd) ; #line 245 extern int isfdtype (int __fd, int __fdtype) ; #line 32 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; #line 97 typedef uint16_t in_port_t; #line 100 enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, #line 122 IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, #line 128 IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, #line 133 IPPORT_RESERVED = 1024, #line 136 IPPORT_USERRESERVED = 5000 }; #line 141 typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; #line 198 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; #line 213 }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; #line 225 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; #line 232 unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; #line 239 struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; #line 251 struct ip_mreq { struct in_addr imr_multiaddr; #line 257 struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; #line 266 struct in_addr imr_interface; #line 269 struct in_addr imr_sourceaddr; }; #line 275 struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; #line 281 unsigned int ipv6mr_interface; }; #line 287 struct group_req { uint32_t gr_interface; #line 293 struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; #line 302 struct sockaddr_storage gsr_group; #line 305 struct sockaddr_storage gsr_source; }; #line 310 struct ip_msfilter { struct in_addr imsf_multiaddr; #line 316 struct in_addr imsf_interface; #line 319 uint32_t imsf_fmode; #line 322 uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; #line 331 struct group_filter { uint32_t gf_interface; #line 337 struct sockaddr_storage gf_group; #line 340 uint32_t gf_fmode; #line 343 uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 98 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; #line 105 struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; #line 113 struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 371 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((const)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((const)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((const)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((const)); #line 446 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; #line 449 extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; #line 46 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; #line 60 extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 62 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/netdb.h" extern int *__h_errno_location (void) __attribute__ ((const)); #line 93 extern void herror (const char *__str) ; #line 96 extern const char *hstrerror (int __err_num) ; #line 101 struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; #line 111 }; #line 118 extern void sethostent (int __stay_open); #line 124 extern void endhostent (void); #line 131 extern struct hostent *gethostent (void); #line 138 extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); #line 145 extern struct hostent *gethostbyname (const char *__name); #line 156 extern struct hostent *gethostbyname2 (const char *__name, int __af); #line 168 extern int gethostent_r (struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyaddr_r (const void *__restrict __addr, __socklen_t __len, int __type, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname_r (const char *__restrict __name, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname2_r (const char *__restrict __name, int __af, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); #line 199 extern void setnetent (int __stay_open); #line 205 extern void endnetent (void); #line 212 extern struct netent *getnetent (void); #line 219 extern struct netent *getnetbyaddr (uint32_t __net, int __type); #line 225 extern struct netent *getnetbyname (const char *__name); #line 238 extern int getnetent_r (struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyname_r (const char *__restrict __name, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); #line 258 struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; #line 271 extern void setservent (int __stay_open); #line 277 extern void endservent (void); #line 284 extern struct servent *getservent (void); #line 291 extern struct servent *getservbyname (const char *__name, const char *__proto); #line 299 extern struct servent *getservbyport (int __port, const char *__proto); #line 310 extern int getservent_r (struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyname_r (const char *__restrict __name, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyport_r (int __port, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); #line 328 struct protoent { char *p_name; char **p_aliases; int p_proto; }; #line 340 extern void setprotoent (int __stay_open); #line 346 extern void endprotoent (void); #line 353 extern struct protoent *getprotoent (void); #line 359 extern struct protoent *getprotobyname (const char *__name); #line 365 extern struct protoent *getprotobynumber (int __proto); #line 376 extern int getprotoent_r (struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobyname_r (const char *__restrict __name, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobynumber_r (int __proto, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); #line 397 extern int setnetgrent (const char *__netgroup); #line 405 extern void endnetgrent (void); #line 414 extern int getnetgrent (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp); #line 425 extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *__domain); #line 434 extern int getnetgrent_r (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp, char *__restrict __buffer, size_t __buflen); #line 453 extern int rcmd (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p); #line 465 extern int rcmd_af (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); #line 481 extern int rexec (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p); #line 493 extern int rexec_af (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); #line 507 extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); #line 517 extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); #line 530 extern int iruserok (uint32_t __raddr, int __suser, const char *__remuser, const char *__locuser); #line 541 extern int iruserok_af (const void *__raddr, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); #line 553 extern int rresvport (int *__alport); #line 562 extern int rresvport_af (int *__alport, sa_family_t __af); #line 569 struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 664 extern int getaddrinfo (const char *__restrict __name, const char *__restrict __service, const struct addrinfo *__restrict __req, struct addrinfo **__restrict __pai); #line 670 extern void freeaddrinfo (struct addrinfo *__ai) ; #line 673 extern const char *gai_strerror (int __ecode) ; #line 679 extern int getnameinfo (const struct sockaddr *__restrict __sa, socklen_t __salen, char *__restrict __host, socklen_t __hostlen, char *__restrict __serv, socklen_t __servlen, unsigned int __flags); Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 174 typedef __pid_t pid_t; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fenv.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 26 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/fenv.h" enum { FE_INEXACT = 1 << (31 - 6), FE_DIVBYZERO = 1 << (31 - 5), FE_UNDERFLOW = 1 << (31 - 4), FE_OVERFLOW = 1 << (31 - 3), #line 43 FE_INVALID = 1 << (31 - 2), #line 97 }; #line 105 enum { FE_TONEAREST = 0, FE_TOWARDZERO = 1, FE_UPWARD = 2, FE_DOWNWARD = 3 }; #line 118 typedef unsigned int fexcept_t; #line 122 typedef double fenv_t; #line 125 extern const fenv_t __fe_dfl_env; #line 65 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/fenv.h" extern int feclearexcept (int __excepts) ; #line 69 extern int fegetexceptflag (fexcept_t *__flagp, int __excepts) ; #line 72 extern int feraiseexcept (int __excepts) ; #line 76 extern int fesetexceptflag (const fexcept_t *__flagp, int __excepts) ; #line 80 extern int fetestexcept (int __excepts) ; #line 86 extern int fegetround (void) ; #line 89 extern int fesetround (int __rounding_direction) ; #line 96 extern int fegetenv (fenv_t *__envp) ; #line 101 extern int feholdexcept (fenv_t *__envp) ; #line 105 extern int fesetenv (const fenv_t *__envp) ; #line 110 extern int feupdateenv (const fenv_t *__envp) ; Defined "HAVE_FENV_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" typedef __pid_t pid_t; #line 74 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sched.h" struct sched_param { int __sched_priority; }; #line 83 extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; #line 87 extern int unshare (int __flags) ; #line 90 extern int sched_getcpu (void) ; #line 101 struct __sched_param { int __sched_priority; }; #line 116 typedef unsigned long int __cpu_mask; #line 123 typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 201 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; #line 55 extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; #line 58 extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; #line 62 extern int sched_getscheduler (__pid_t __pid) ; #line 65 extern int sched_yield (void) ; #line 68 extern int sched_get_priority_max (int __algorithm) ; #line 71 extern int sched_get_priority_min (int __algorithm) ; #line 74 extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" typedef __pid_t pid_t; #line 74 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sched.h" struct sched_param { int __sched_priority; }; #line 83 extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; #line 87 extern int unshare (int __flags) ; #line 90 extern int sched_getcpu (void) ; #line 101 struct __sched_param { int __sched_priority; }; #line 116 typedef unsigned long int __cpu_mask; #line 123 typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 201 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; #line 55 extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; #line 58 extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; #line 62 extern int sched_getscheduler (__pid_t __pid) ; #line 65 extern int sched_yield (void) ; #line 68 extern int sched_get_priority_max (int __algorithm) ; #line 71 extern int sched_get_priority_min (int __algorithm) ; #line 74 extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/setjmp.h" typedef long int __jmp_buf[64] __attribute__ ((__aligned__ (16))); #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; #line 44 enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL #line 61 }; #line 66 enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; #line 115 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 147 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; #line 157 enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; #line 167 enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; #line 182 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; #line 191 enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; #line 225 extern int pthread_create (pthread_t *__restrict __newthread, const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) ; #line 234 extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); #line 242 extern int pthread_join (pthread_t __th, void **__thread_return); #line 263 extern int pthread_detach (pthread_t __th) ; #line 267 extern pthread_t pthread_self (void) __attribute__ ((const)); #line 270 extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; #line 278 extern int pthread_attr_init (pthread_attr_t *__attr) ; #line 281 extern int pthread_attr_destroy (pthread_attr_t *__attr) ; #line 285 extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; #line 290 extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; #line 296 extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; #line 301 extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; #line 307 extern int pthread_attr_getschedparam (const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) ; #line 313 extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, const struct sched_param *__restrict __param) ; #line 318 extern int pthread_attr_getschedpolicy (const pthread_attr_t *__restrict __attr, int *__restrict __policy) ; #line 323 extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; #line 327 extern int pthread_attr_getinheritsched (const pthread_attr_t *__restrict __attr, int *__restrict __inherit) ; #line 332 extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; #line 338 extern int pthread_attr_getscope (const pthread_attr_t *__restrict __attr, int *__restrict __scope) ; #line 343 extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; #line 347 extern int pthread_attr_getstackaddr (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__deprecated__)); #line 355 extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__deprecated__)); #line 360 extern int pthread_attr_getstacksize (const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) ; #line 367 extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; #line 373 extern int pthread_attr_getstack (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) ; #line 381 extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 413 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; #line 418 extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) ; #line 424 extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 478 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; #line 490 extern int pthread_setcancelstate (int __state, int *__oldstate); #line 494 extern int pthread_setcanceltype (int __type, int *__oldtype); #line 497 extern int pthread_cancel (pthread_t __th); #line 502 extern void pthread_testcancel (void); #line 507 typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); #line 524 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 664 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 676 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 717 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; #line 726 struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; #line 733 extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; #line 738 extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; #line 742 extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; #line 746 extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; #line 751 extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 757 extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 762 extern int pthread_mutex_getprioceiling (const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) ; #line 769 extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) ; #line 777 extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) ; #line 790 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; #line 794 extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; #line 798 extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) ; #line 804 extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 810 extern int pthread_mutexattr_gettype (const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) ; #line 817 extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) ; #line 822 extern int pthread_mutexattr_getprotocol (const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) ; #line 829 extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) ; #line 834 extern int pthread_mutexattr_getprioceiling (const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) ; #line 840 extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) ; #line 846 extern int pthread_mutexattr_getrobust (const pthread_mutexattr_t *__attr, int *__robustness) ; #line 856 extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) ; #line 872 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, const pthread_rwlockattr_t *__restrict __attr) ; #line 877 extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; #line 881 extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; #line 885 extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; #line 890 extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 896 extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; #line 900 extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; #line 905 extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 911 extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; #line 918 extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; #line 922 extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; #line 926 extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) ; #line 932 extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; #line 937 extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) ; #line 943 extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; #line 952 extern int pthread_cond_init (pthread_cond_t *__restrict __cond, const pthread_condattr_t *__restrict __cond_attr) ; #line 957 extern int pthread_cond_destroy (pthread_cond_t *__cond) ; #line 961 extern int pthread_cond_signal (pthread_cond_t *__cond) ; #line 965 extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; #line 973 extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) ; #line 984 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 992 extern int pthread_condattr_init (pthread_condattr_t *__attr) ; #line 996 extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; #line 1000 extern int pthread_condattr_getpshared (const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1006 extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; #line 1011 extern int pthread_condattr_getclock (const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) ; #line 1017 extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; #line 1028 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; #line 1032 extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; #line 1036 extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; #line 1040 extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; #line 1044 extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; #line 1052 extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, const pthread_barrierattr_t *__restrict __attr, unsigned int __count) ; #line 1058 extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; #line 1062 extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; #line 1067 extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; #line 1071 extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; #line 1075 extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1081 extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; #line 1095 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; #line 1100 extern int pthread_key_delete (pthread_key_t __key) ; #line 1103 extern void *pthread_getspecific (pthread_key_t __key) ; #line 1106 extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; #line 1112 extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; #line 1129 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO sh: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.headers/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -O /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from PETSc.utilities.cacheDetails(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from PETSc.utilities.cacheDetails(config/PETSc/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST checkMemcmp from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:78) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:78) Check for 8-bit clean memcmp All intermediate test results are stored in /tmp/petsc-lj0zFz/config.functions sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.functions/conftest sh: /tmp/petsc-lj0zFz/config.functions/conftest Executing: /tmp/petsc-lj0zFz/config.functions/conftest sh: ================================================================================ TEST checkSysinfo from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:102) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:102) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for function sysinfo sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 11 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 60 struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); Possible ERROR while running preprocessor: "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. error message = {"/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: sys/sysinfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 11 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 60 struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; #line 34 extern int get_nprocs_conf (void) ; #line 37 extern int get_nprocs (void) ; #line 41 extern long int get_phys_pages (void) ; #line 44 extern long int get_avphys_pages (void) ; Possible ERROR while running preprocessor: "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. error message = {"/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: sys/systeminfo.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.functions/conftest.c", line 13.4: 1506-205 (S) #error "Cannot check sysinfo without special headers" } Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for function vprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vprintf) || defined (__stub___vprintf) choke me #else vprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_VPRINTF" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: ================================================================================ TEST checkVFPrintf from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:132) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:132) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for function vfprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vfprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vfprintf) || defined (__stub___vfprintf) choke me #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_VFPRINTF" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: ================================================================================ TEST checkVSNPrintf from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:139) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:139) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Checking for function _vsnprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_vsnprintf' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_vsnprintf' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Checking for function vsnprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) choke me #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_VSNPRINTF" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: ================================================================================ TEST checkNanosleep from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:183) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:183) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:159) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:159) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.functions/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.functions/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.functions/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.functions/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:169) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:169) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.functions/conftest.c", line 6.25: 1506-068 (S) Operation between types "int" and "void" is not allowed. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:175) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:175) Checks whether the variable argument list functionality is working sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getrusage sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETRUSAGE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sbreak sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `sbreak' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `sbreak' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function task_info sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char task_info(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char task_info(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_task_info) || defined (__stub___task_info) choke me #else task_info(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `task_info' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `task_info' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char task_info(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char task_info(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_task_info) || defined (__stub___task_info) choke me #else task_info(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function access sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_ACCESS" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _access sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_access' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_access' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function clock sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_CLOCK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function drand48 sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DRAND48" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getcwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETCWD" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _getcwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_getcwd' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_getcwd' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getdomainname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETDOMAINNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETHOSTNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpwuid sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpwuid(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpwuid(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpwuid) || defined (__stub___getpwuid) choke me #else getpwuid(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPWUID" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gettimeofday sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETTIMEOFDAY" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: the `getwd' function is dangerous and should not be used. output: error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: the `getwd' function is dangerous and should not be used. } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Defined "HAVE_GETWD" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memalign sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MEMALIGN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memmove sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function mkstemp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MKSTEMP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function popen sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_POPEN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function PXFGETARG sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function rand sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_RAND" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function readlink sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_READLINK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function realpath sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_REALPATH" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigaction sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGACTION" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function signal sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGNAL" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigset sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGSET" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function usleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_USLEEP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SLEEP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _sleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_sleep' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_sleep' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function socket sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SOCKET" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function times sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_TIMES" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostbyname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETHOSTBYNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function uname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_UNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function snprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SNPRINTF" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _snprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_snprintf' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_snprintf' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _fullpath sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_fullpath' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_fullpath' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function lseek sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LSEEK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _lseek sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_lseek' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_lseek' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function time sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_TIME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function fork sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_FORK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function stricmp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `stricmp' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `stricmp' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function strcasecmp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_STRCASECMP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function bzero sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_BZERO" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlopen sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Defined "HAVE_DLOPEN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlsym sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLSYM" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlclose sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLCLOSE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlerror sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLERROR" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memcpy sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memcpy' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memcpy' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memset sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memset' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memset' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function access sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_ACCESS" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _access sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_access' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_access' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function clock sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_CLOCK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function drand48 sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DRAND48" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getcwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETCWD" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _getcwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_getcwd' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_getcwd' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getdomainname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETDOMAINNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETHOSTNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpwuid sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpwuid(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpwuid(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpwuid) || defined (__stub___getpwuid) choke me #else getpwuid(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPWUID" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gettimeofday sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETTIMEOFDAY" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getwd sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: the `getwd' function is dangerous and should not be used. output: error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: the `getwd' function is dangerous and should not be used. } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Defined "HAVE_GETWD" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memalign sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MEMALIGN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memmove sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function mkstemp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MKSTEMP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function popen sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_POPEN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function PXFGETARG sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function rand sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_RAND" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function readlink sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_READLINK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function realpath sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_REALPATH" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigaction sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGACTION" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function signal sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGNAL" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigset sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SIGSET" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function usleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_USLEEP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SLEEP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _sleep sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_sleep' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_sleep' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function socket sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SOCKET" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function times sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_TIMES" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostbyname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETHOSTBYNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function uname sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_UNAME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function snprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_SNPRINTF" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _snprintf sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_snprintf' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_snprintf' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _fullpath sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_fullpath' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_fullpath' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function lseek sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LSEEK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _lseek sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_lseek' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_lseek' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function time sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_TIME" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function fork sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_FORK" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function stricmp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `stricmp' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `stricmp' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function strcasecmp sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_STRCASECMP" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function bzero sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_BZERO" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlopen sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Defined "HAVE_DLOPEN" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlsym sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLSYM" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlclose sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLCLOSE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlerror sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_DLERROR" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memcpy sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memcpy' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memcpy' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memset sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memset' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `_intel_fast_memset' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getrusage sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETRUSAGE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sbreak sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `sbreak' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `sbreak' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function task_info sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char task_info(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char task_info(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_task_info) || defined (__stub___task_info) choke me #else task_info(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `task_info' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `task_info' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char task_info(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char task_info(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_task_info) || defined (__stub___task_info) choke me #else task_info(); #endif ; return 0; } ================================================================================ TEST configureMemorySize from PETSc.utilities.getResidentSetSize(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/getResidentSetSize.py:32) TESTING: configureMemorySize from PETSc.utilities.getResidentSetSize(config/PETSc/utilities/getResidentSetSize.py:32) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFPTrap from PETSc.utilities.FPTrap(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/FPTrap.py:27) TESTING: configureFPTrap from PETSc.utilities.FPTrap(config/PETSc/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: fpxcp.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: floatingpoint.h sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check__int64 from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:45) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:45) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 All intermediate test results are stored in /tmp/petsc-lj0zFz/config.types sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found Defined "HAVE___INT64" to "1" ================================================================================ TEST checkSizeTypes from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:51) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:51) Checks for types associated with sizes, such as size_t. Checking for type: size_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:61) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:61) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:56) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:56) Checks for types associated with integers, such as int32_t. Checking for type: int32_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:67) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:67) Checks for pid_t, and defines it if necessary Checking for type: pid_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:71) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:71) Checks for uid_t and gid_t, and defines them if necessary sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.types/conftest.c sh: #line 3 "/tmp/petsc-lj0zFz/config.types/conftest.c" sys/types.h ================================================================================ TEST checkSignal from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:78) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:78) Checks the return type of signal() and defines RETSIGTYPE to that type name sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:99) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:99) Check for complex numbers in in C99 std sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double complex x; x = I; ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:108) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:108) Check for complex numbers in namespace std Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.types/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.types/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.types/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.types/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:129) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:129) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.types/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.compilers -O /tmp/petsc-lj0zFz/config.types/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkFortranDReal from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:141) TESTING: checkFortranDReal from config.types(config/BuildSystem/config/types.py:141) Checks whether dreal is provided in Fortran, and if not defines MISSING_DREAL Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.types/conftest.F", line 3.17: 1513-041 (S) Arguments of the wrong type were specified for the INTRINSIC procedure "dreal". ** main === End of Compilation 1 === 1501-511 Compilation failed for file conftest.F. } Source: program main double precision d d = dreal(3.0) end Compile failed inside link Defined "MISSING_DREAL" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:149) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:149) Checks for working const, and if not found defines it to empty string sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {"/tmp/petsc-lj0zFz/config.types/conftest.c", line 7.43: 1506-359 (I) Automatic variable x contains a const member and is not initialized. It will be initialized to zero. } Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:205) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:205) If the machine is big endian, defines WORDS_BIGENDIAN sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if !BYTE_ORDER || !BIG_ENDIAN || !LITTLE_ENDIAN bogus endian macros #endif ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if BYTE_ORDER != BIG_ENDIAN not big endian #endif ; return 0; } Defined "WORDS_BIGENDIAN" to "1" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:258) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:258) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:309) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:309) Determine the nubmer of bits per byte and define BITS_PER_BYTE sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/types.py:355) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:355) ================================================================================ TEST configureMemAlign from PETSc.utilities.memAlign(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/memAlign.py:30) TESTING: configureMemAlign from PETSc.utilities.memAlign(config/PETSc/utilities/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST configureCHUD from PETSc.utilities.CHUD(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/CHUD.py:25) TESTING: configureCHUD from PETSc.utilities.CHUD(config/PETSc/utilities/CHUD.py:25) Determines if the Apple CHUD hardware monitoring utilities are available sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lsocket output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lsocket } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lfpe output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lfpe } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lsocket output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lsocket } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lsocket -lnsl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lfpe output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lfpe } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lfpe -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST checkMath from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:208) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:208) Check for sin() in libm, the math library Checking for function sin in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); int main() { double x = 0,y; y = sin(x); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for function floor in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double floor(double); int main() { double x = 0,y; y = floor(x); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for function log10 in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log10(double); int main() { double x = 0,y; y = log10(x); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for function pow in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double pow(double, double); int main() { double x = 0,y ; y = pow(x, x); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:224) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:224) Check for erf() in libm, the math library Checking for function erf in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkCompression from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:233) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:233) Check for libz, the compression library Checking for function compress in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0x24): undefined reference to `compress' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0x24): undefined reference to `compress' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['z'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lz -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lz -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lz output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lz } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lz -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['zlib.lib'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o zlib.lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o zlib.lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-218 (W) file zlib.lib contains an incorrect file suffix /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-228 (W) input file zlib.lib not found output: ret = 64512 error message = {/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-218 (W) file zlib.lib contains an incorrect file suffix /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/.orig/bgxlc_r: 1501-228 (W) input file zlib.lib not found } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o zlib.lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Warning: No compression library found ================================================================================ TEST checkRealtime from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:254) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:254) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for function clock_gettime in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:270) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:270) Check for the header and libraries necessary for dynamic library manipulation ================================================================================ TEST configureTimers from PETSc.utilities.timer(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/timer.py:35) TESTING: configureTimers from PETSc.utilities.timer(config/PETSc/utilities/timer.py:35) Sets PETSC_HAVE_FAST_MPI_WTIME PETSC_USE_READ_REAL_TIME PETSC_USE_GETCLOCK PETSC_USE_DCLOCK PETSC_USE_NT_TIME. Checking for function MPI_CRAY_barrier in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `MPI_CRAY_barrier' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `MPI_CRAY_barrier' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Popping language C Cray-MPI test failure ================================================================================ TEST configureFortranCommandLine from PETSc.utilities.fortranCommandLine(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from PETSc.utilities.fortranCommandLine(config/PETSc/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for function in library [''] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for function get_command_argument in library [''] ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument(); int main() { get_command_argument() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `get_command_argument' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `get_command_argument' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument(); int main() { get_command_argument() ; return 0; } Popping language C Checking for function getarg in library [''] ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg(); int main() { getarg() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_GETARG" to "1" Checking for function ipxfargc_ sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `ipxfargc_' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `ipxfargc_' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Checking for function f90_unix_MP_iargc sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `f90_unix_MP_iargc' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `f90_unix_MP_iargc' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Checking for function PXFGETARG sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.functions/conftest.o:(.text+0xc): undefined reference to `PXFGETARG' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Checking for function iargc_ sh: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.functions/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.functions/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm Executing: mpicc -o /tmp/petsc-lj0zFz/config.functions/conftest -O /tmp/petsc-lj0zFz/config.functions/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm sh: Defined "HAVE_IARGC_" to "1" Defined "HAVE_BGL_IARGC" to "1" Popping language C Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:722) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:722) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in User specified root directory MPI: [] Contents: ['mpic++', 'mpicc', 'mpicxx', 'mpif77', 'mpif90', 'mpixlc', 'mpixlc_r', 'mpixlcxx', 'mpixlcxx_r', 'mpixlf2003', 'mpixlf2003_r', 'mpixlf77', 'mpixlf77_r', 'mpixlf90', 'mpixlf90_r', 'mpixlf95', 'mpixlf95_r', 'mpixlf2008', 'mpixlf2008_r'] ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function MPI_Init in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); int main() { MPI_Init() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for function MPI_Comm_create in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_create(); int main() { MPI_Comm_create() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for headers User specified root directory MPI: ['/soft/compilers/wrappers/xl/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/soft/compilers/wrappers/xl/include'] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; #line 49 typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; #line 56 typedef unsigned long int uint64_t; #line 66 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; #line 77 typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; #line 91 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 104 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 120 typedef long int intptr_t; #line 123 typedef unsigned long int uintptr_t; #line 135 typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 83 "/bgsys/drivers/V1R2M1/ppc64/comm/include/mpi.h" typedef int MPI_Datatype; #line 102 static const MPI_Datatype mpich_mpi_char = ((MPI_Datatype)0x4c000101); static const MPI_Datatype mpich_mpi_signed_char = ((MPI_Datatype)0x4c000118); static const MPI_Datatype mpich_mpi_unsigned_char = ((MPI_Datatype)0x4c000102); static const MPI_Datatype mpich_mpi_wchar = ((MPI_Datatype)0x4c00040e); static const MPI_Datatype mpich_mpi_short = ((MPI_Datatype)0x4c000203); static const MPI_Datatype mpich_mpi_unsigned_short = ((MPI_Datatype)0x4c000204); static const MPI_Datatype mpich_mpi_int = ((MPI_Datatype)0x4c000405); static const MPI_Datatype mpich_mpi_unsigned = ((MPI_Datatype)0x4c000406); static const MPI_Datatype mpich_mpi_long = ((MPI_Datatype)0x4c000807); static const MPI_Datatype mpich_mpi_unsigned_long = ((MPI_Datatype)0x4c000808); static const MPI_Datatype mpich_mpi_float = ((MPI_Datatype)0x4c00040a); static const MPI_Datatype mpich_mpi_double = ((MPI_Datatype)0x4c00080b); static const MPI_Datatype mpich_mpi_long_double = ((MPI_Datatype)0x4c00100c); static const MPI_Datatype mpich_mpi_long_long_int = ((MPI_Datatype)0x4c000809); static const MPI_Datatype mpich_mpi_unsigned_long_long = ((MPI_Datatype)0x4c000819); #line 138 struct mpich_struct_mpi_float_int { float f; int i; }; struct mpich_struct_mpi_double_int { double d; int i; }; struct mpich_struct_mpi_long_int { long l; int i; }; struct mpich_struct_mpi_short_int { short s; int i; }; struct mpich_struct_mpi_2int { int i1; int i2; }; struct mpich_struct_mpi_long_double_int { long double ld; int i; }; static const MPI_Datatype mpich_mpi_float_int = ((MPI_Datatype)0x8c000000); static const MPI_Datatype mpich_mpi_double_int = ((MPI_Datatype)0x8c000001); static const MPI_Datatype mpich_mpi_long_int = ((MPI_Datatype)0x8c000002); static const MPI_Datatype mpich_mpi_short_int = ((MPI_Datatype)0x8c000003); static const MPI_Datatype mpich_mpi_2int = ((MPI_Datatype)0x4c000816); static const MPI_Datatype mpich_mpi_long_double_int = ((MPI_Datatype)0x8c000004); #line 198 static const MPI_Datatype mpich_mpi_int8_t = ((MPI_Datatype)0x4c000137); static const MPI_Datatype mpich_mpi_int16_t = ((MPI_Datatype)0x4c000238); static const MPI_Datatype mpich_mpi_int32_t = ((MPI_Datatype)0x4c000439); static const MPI_Datatype mpich_mpi_int64_t = ((MPI_Datatype)0x4c00083a); static const MPI_Datatype mpich_mpi_uint8_t = ((MPI_Datatype)0x4c00013b); static const MPI_Datatype mpich_mpi_uint16_t = ((MPI_Datatype)0x4c00023c); static const MPI_Datatype mpich_mpi_uint32_t = ((MPI_Datatype)0x4c00043d); static const MPI_Datatype mpich_mpi_uint64_t = ((MPI_Datatype)0x4c00083e); #line 214 static const MPI_Datatype mpich_mpi_c_bool = ((MPI_Datatype)0x4c00013f); static const MPI_Datatype mpich_mpi_c_float_complex = ((MPI_Datatype)0x4c000840); static const MPI_Datatype mpich_mpi_c_double_complex = ((MPI_Datatype)0x4c001041); static const MPI_Datatype mpich_mpi_c_long_double_complex = ((MPI_Datatype)0x4c002042); #line 229 typedef int MPI_Comm; #line 234 typedef int MPI_Group; #line 238 typedef int MPI_Win; #line 246 typedef struct ADIOI_FileD *MPI_File; #line 250 typedef int MPI_Op; #line 306 static const MPI_Datatype mpich_mpi_datatype_null = ((MPI_Datatype)0x0c000000); #line 319 typedef enum MPIR_Win_flavor_e { MPIX_WIN_FLAVOR_CREATE = 1, MPIX_WIN_FLAVOR_ALLOCATE = 2, MPIX_WIN_FLAVOR_DYNAMIC = 3, MPIX_WIN_FLAVOR_SHARED = 4 } MPIR_Win_flavor_t; #line 327 typedef enum MPIR_Win_model_e { MPIX_WIN_SEPARATE = 1, MPIX_WIN_UNIFIED = 2 } MPIR_Win_model_t; #line 336 typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; #line 339 extern int * const MPI_UNWEIGHTED; #line 355 typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; #line 383 typedef int MPI_Errhandler; #line 404 typedef int MPI_Request; #line 407 typedef int MPIX_Message; #line 410 typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); #line 413 typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); #line 458 enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPIX_COMBINER_HINDEXED_BLOCK = 11, MPI_COMBINER_STRUCT_INTEGER = 12, MPI_COMBINER_STRUCT = 13, MPI_COMBINER_SUBARRAY = 14, MPI_COMBINER_DARRAY = 15, MPI_COMBINER_F90_REAL = 16, MPI_COMBINER_F90_COMPLEX = 17, MPI_COMBINER_F90_INTEGER = 18, MPI_COMBINER_RESIZED = 19 }; #line 481 typedef int MPI_Info; #line 507 typedef long MPI_Aint; typedef int MPI_Fint; static const MPI_Datatype mpich_mpi_aint = ((MPI_Datatype)0x4c000843); #line 523 typedef long long MPI_Offset; static const MPI_Datatype mpich_mpi_offset = ((MPI_Datatype)0x4c000844); #line 528 typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; #line 538 struct MPIR_T_enum; typedef struct MPIR_T_enum * MPIX_T_enum; struct MPIR_T_cvar_handle; typedef struct MPIR_T_cvar_handle * MPIX_T_cvar_handle; struct MPIR_T_pvar_handle; typedef struct MPIR_T_pvar_handle * MPIX_T_pvar_handle; struct MPIR_T_pvar_session; typedef struct MPIR_T_pvar_session * MPIX_T_pvar_session; #line 548 extern struct MPIR_T_pvar_handle * const MPIX_T_PVAR_ALL_HANDLES; #line 557 enum MPIR_T_verbosity_t { #line 560 MPIX_T_VERBOSITY_INVALID = 0, #line 563 MPIX_T_VERBOSITY_USER_BASIC = 221, MPIX_T_VERBOSITY_USER_DETAIL, MPIX_T_VERBOSITY_USER_ALL, MPIX_T_VERBOSITY_TUNER_BASIC, MPIX_T_VERBOSITY_TUNER_DETAIL, MPIX_T_VERBOSITY_TUNER_ALL, MPIX_T_VERBOSITY_MPIDEV_BASIC, MPIX_T_VERBOSITY_MPIDEV_DETAIL, MPIX_T_VERBOSITY_MPIDEV_ALL }; enum MPIR_T_bind_t { #line 579 MPIX_T_BIND_INVALID = 0, #line 582 MPIX_T_BIND_NO_OBJECT = 9700, MPIX_T_BIND_MPI_COMM, MPIX_T_BIND_MPI_DATATYPE, MPIX_T_BIND_MPI_ERRHANDLER, MPIX_T_BIND_MPI_FILE, MPIX_T_BIND_MPI_GROUP, MPIX_T_BIND_MPI_OP, MPIX_T_BIND_MPI_REQUEST, MPIX_T_BIND_MPI_WIN, MPIX_T_BIND_MPI_MESSAGE, MPIX_T_BIND_MPI_INFO }; enum MPIR_T_scope_t { #line 598 MPIX_T_SCOPE_INVALID = 0, #line 601 MPIX_T_SCOPE_READONLY = 60439, MPIX_T_SCOPE_LOCAL, MPIX_T_SCOPE_GROUP, MPIX_T_SCOPE_GROUP_EQ, MPIX_T_SCOPE_ALL, MPIX_T_SCOPE_ALL_EQ }; enum MPIR_T_pvar_class_t { #line 612 MPIX_T_PVAR_CLASS_INVALID = 0, #line 615 MPIX_T_PVAR_CLASS_STATE = 240, MPIX_T_PVAR_CLASS_LEVEL, MPIX_T_PVAR_CLASS_SIZE, MPIX_T_PVAR_CLASS_PERCENTAGE, MPIX_T_PVAR_CLASS_HIGHWATERMARK, MPIX_T_PVAR_CLASS_LOWWATERMARK, MPIX_T_PVAR_CLASS_COUNTER, MPIX_T_PVAR_CLASS_AGGREGATE, MPIX_T_PVAR_CLASS_TIMER, MPIX_T_PVAR_CLASS_GENERIC }; #line 675 extern MPI_Fint * MPI_F_STATUS_IGNORE; extern MPI_Fint * MPI_F_STATUSES_IGNORE; #line 694 typedef int (MPI_Grequest_cancel_function)(void *, int); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); #line 788 typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype datatype, MPI_Aint *, void *); #line 811 int MPI_Send( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int MPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *) ; int MPI_Get_count( MPI_Status *, MPI_Datatype, int *); int MPI_Bsend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int MPI_Ssend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int MPI_Rsend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int MPI_Buffer_attach( void*, int); int MPI_Buffer_detach( void*, int *); int MPI_Isend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Ibsend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Issend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Irsend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Wait(MPI_Request *, MPI_Status *); int MPI_Test(MPI_Request *, int *, MPI_Status *); int MPI_Request_free(MPI_Request *); int MPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int MPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Waitall(int, MPI_Request *, MPI_Status *); int MPI_Testall(int, MPI_Request *, int *, MPI_Status *); int MPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int MPI_Probe(int, int, MPI_Comm, MPI_Status *); int MPI_Cancel(MPI_Request *); int MPI_Test_cancelled( MPI_Status *, int *); int MPI_Send_init( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int MPI_Bsend_init( void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *) ; int MPI_Ssend_init( void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *) ; int MPI_Rsend_init( void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *) ; int MPI_Recv_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *) ; int MPI_Start(MPI_Request *); int MPI_Startall(int, MPI_Request *); int MPI_Sendrecv( void *, int, MPI_Datatype,int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *) ; int MPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *) ; int MPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int MPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int MPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int MPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int MPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int MPI_Address( void*, MPI_Aint *); int MPI_Type_extent(MPI_Datatype, MPI_Aint *); #line 858 int MPI_Type_size(MPI_Datatype, int *); int MPI_Type_lb(MPI_Datatype, MPI_Aint *); int MPI_Type_ub(MPI_Datatype, MPI_Aint *); int MPI_Type_commit(MPI_Datatype *); int MPI_Type_free(MPI_Datatype *); int MPI_Get_elements( MPI_Status *, MPI_Datatype, int *); int MPI_Pack( void*, int, MPI_Datatype, void *, int, int *, MPI_Comm) ; int MPI_Unpack( void*, int, int *, void *, int, MPI_Datatype, MPI_Comm) ; int MPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int MPI_Barrier(MPI_Comm ); int MPI_Bcast(void*, int, MPI_Datatype, int, MPI_Comm) ; int MPI_Gather( void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int MPI_Gatherv( void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm) ; int MPI_Scatter( void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int MPI_Scatterv( void* , int *, int *, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int MPI_Allgather( void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm) ; int MPI_Allgatherv( void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm) ; int MPI_Alltoall( void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm) ; int MPI_Alltoallv( void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm) ; int MPI_Reduce( void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm) ; int MPI_Op_create(MPI_User_function *, int, MPI_Op *); int MPI_Op_free( MPI_Op *); int MPI_Allreduce( void*, void*, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Reduce_scatter( void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Scan( void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Group_size(MPI_Group, int *); int MPI_Group_rank(MPI_Group, int *); int MPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int MPI_Group_compare(MPI_Group, MPI_Group, int *); int MPI_Comm_group(MPI_Comm, MPI_Group *); int MPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_free(MPI_Group *); int MPI_Comm_size(MPI_Comm, int *); int MPI_Comm_rank(MPI_Comm, int *); int MPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int MPI_Comm_dup(MPI_Comm, MPI_Comm *); int MPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int MPI_Comm_free(MPI_Comm *); int MPI_Comm_test_inter(MPI_Comm, int *); int MPI_Comm_remote_size(MPI_Comm, int *); int MPI_Comm_remote_group(MPI_Comm, MPI_Group *); int MPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm * ); int MPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int MPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int MPI_Keyval_free(int *); int MPI_Attr_put(MPI_Comm, int, void*); int MPI_Attr_get(MPI_Comm, int, void *, int *); int MPI_Attr_delete(MPI_Comm, int); int MPI_Topo_test(MPI_Comm, int *); int MPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Dims_create(int, int, int *); int MPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Graphdims_get(MPI_Comm, int *, int *); int MPI_Graph_get(MPI_Comm, int, int, int *, int *); int MPI_Cartdim_get(MPI_Comm, int *); int MPI_Cart_get(MPI_Comm, int, int *, int *, int *); int MPI_Cart_rank(MPI_Comm, int *, int *); int MPI_Cart_coords(MPI_Comm, int, int, int *); int MPI_Graph_neighbors_count(MPI_Comm, int, int *); int MPI_Graph_neighbors(MPI_Comm, int, int, int *); int MPI_Cart_shift(MPI_Comm, int, int, int *, int *); int MPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int MPI_Cart_map(MPI_Comm, int, int *, int *, int *); int MPI_Graph_map(MPI_Comm, int, int *, int *, int *); int MPI_Get_processor_name(char *, int *); int MPI_Get_version(int *, int *); int MPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int MPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int MPI_Errhandler_free(MPI_Errhandler *); int MPI_Error_string(int, char *, int *); int MPI_Error_class(int, int *); double MPI_Wtime(void); double MPI_Wtick(void); double PMPI_Wtime(void); double PMPI_Wtick(void); int MPI_Init(int *, char ***); int MPI_Finalize(void); int MPI_Initialized(int *); int MPI_Abort(MPI_Comm, int); #line 955 int MPI_Pcontrol(const int, ...); int MPIR_Dup_fn ( MPI_Comm, int, void *, void *, void *, int * ); #line 963 int MPI_Close_port( char *); int MPI_Comm_accept( char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_connect( char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_disconnect(MPI_Comm *); int MPI_Comm_get_parent(MPI_Comm *); int MPI_Comm_join(int, MPI_Comm *); int MPI_Comm_spawn( char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int MPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int MPI_Lookup_name( char *, MPI_Info, char *); int MPI_Open_port(MPI_Info, char *); int MPI_Publish_name( char *, MPI_Info, char *); int MPI_Unpublish_name( char *, MPI_Info, char *); #line 979 int MPI_Accumulate( void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win) ; int MPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win) ; int MPI_Put( void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win) ; int MPI_Win_complete(MPI_Win); int MPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int MPI_Win_fence(int, MPI_Win); int MPI_Win_free(MPI_Win *); int MPI_Win_get_group(MPI_Win, MPI_Group *); int MPI_Win_lock(int, int, int, MPI_Win); int MPI_Win_post(MPI_Group, int, MPI_Win); int MPI_Win_start(MPI_Group, int, MPI_Win); int MPI_Win_test(MPI_Win, int *); int MPI_Win_unlock(int, MPI_Win); int MPI_Win_wait(MPI_Win); #line 998 int MPIX_Win_allocate(MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, void *baseptr, MPI_Win *win); int MPIX_Win_allocate_shared(MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, void *baseptr, MPI_Win *win); int MPIX_Win_shared_query(MPI_Win win, int rank, MPI_Aint *size, int *disp_unit, void *baseptr); int MPIX_Win_create_dynamic(MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPIX_Win_attach(MPI_Win win, void *base, MPI_Aint size); int MPIX_Win_detach(MPI_Win win, const void *base); int MPIX_Get_accumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, void *result_addr, int result_count, MPI_Datatype result_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPIX_Fetch_and_op(const void *origin_addr, void *result_addr, MPI_Datatype datatype, int target_rank, MPI_Aint target_disp, MPI_Op op, MPI_Win win); int MPIX_Compare_and_swap(const void *origin_addr, const void *compare_addr, void *result_addr, MPI_Datatype datatype, int target_rank, MPI_Aint target_disp, MPI_Win win); int MPIX_Rput(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win, MPI_Request *request); int MPIX_Rget(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win, MPI_Request *request); int MPIX_Raccumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win, MPI_Request *request); int MPIX_Rget_accumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, void *result_addr, int result_count, MPI_Datatype result_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win, MPI_Request *request); int MPIX_Win_lock_all(int assert, MPI_Win win); int MPIX_Win_unlock_all(MPI_Win win); int MPIX_Win_flush(int rank, MPI_Win win); int MPIX_Win_flush_all(MPI_Win win); int MPIX_Win_flush_local(int rank, MPI_Win win); int MPIX_Win_flush_local_all(MPI_Win win); int MPIX_Win_sync(MPI_Win win); #line 1045 int MPI_Alltoallw( void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int MPI_Exscan( void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; #line 1051 int MPI_Add_error_class(int *); int MPI_Add_error_code(int, int *); int MPI_Add_error_string(int, char *); int MPI_Comm_call_errhandler(MPI_Comm, int); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int MPI_Comm_delete_attr(MPI_Comm, int); int MPI_Comm_free_keyval(int *); int MPI_Comm_get_attr(MPI_Comm, int, void *, int *); int MPI_Comm_get_name(MPI_Comm, char *, int *); int MPI_Comm_set_attr(MPI_Comm, int, void *); int MPI_Comm_set_name(MPI_Comm, char *); int MPI_File_call_errhandler(MPI_File, int); int MPI_Grequest_complete(MPI_Request); int MPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int MPI_Init_thread(int *, char ***, int, int *); int MPI_Is_thread_main(int *); int MPI_Query_thread(int *); int MPI_Status_set_cancelled(MPI_Status *, int); int MPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int MPI_Type_delete_attr(MPI_Datatype, int); int MPI_Type_dup(MPI_Datatype, MPI_Datatype *); int MPI_Type_free_keyval(int *); int MPI_Type_get_attr(MPI_Datatype, int, void *, int *); int MPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int MPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int MPI_Type_get_name(MPI_Datatype, char *, int *); int MPI_Type_set_attr(MPI_Datatype, int, void *); int MPI_Type_set_name(MPI_Datatype, char *); int MPI_Type_match_size( int, int, MPI_Datatype *); int MPI_Win_call_errhandler(MPI_Win, int); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int MPI_Win_delete_attr(MPI_Win, int); int MPI_Win_free_keyval(int *); int MPI_Win_get_attr(MPI_Win, int, void *, int *); int MPI_Win_get_name(MPI_Win, char *, int *); int MPI_Win_set_attr(MPI_Win, int, void *); int MPI_Win_set_name(MPI_Win, char *); #line 1116 int MPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int MPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int MPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int MPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int MPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int MPI_File_set_errhandler(MPI_File, MPI_Errhandler); int MPI_Finalized(int *); int MPI_Free_mem(void *); int MPI_Get_address( void *, MPI_Aint *); int MPI_Info_create(MPI_Info *); int MPI_Info_delete(MPI_Info, char *); int MPI_Info_dup(MPI_Info, MPI_Info *); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info, char *, int, char *, int *); int MPI_Info_get_nkeys(MPI_Info, int *); int MPI_Info_get_nthkey(MPI_Info, int, char *); int MPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int MPI_Info_set(MPI_Info, char *, char *); int MPI_Pack_external( char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *) ; int MPI_Pack_external_size( char *, int, MPI_Datatype, MPI_Aint *); int MPI_Request_get_status(MPI_Request, int *, MPI_Status *); int MPI_Status_c2f( MPI_Status *, MPI_Fint *); int MPI_Status_f2c( MPI_Fint *, MPI_Status *); int MPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int MPIX_Type_create_hindexed_block(int, int, const MPI_Aint [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int MPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int MPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Unpack_external( char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype) ; int MPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int MPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int MPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); #line 1166 int MPI_Type_create_f90_integer( int, MPI_Datatype * ); int MPI_Type_create_f90_real( int, int, MPI_Datatype * ); int MPI_Type_create_f90_complex( int, int, MPI_Datatype * ); #line 1171 int MPI_Reduce_local( void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op) ; int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Reduce_scatter_block( void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) ; int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); #line 1180 int MPIX_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPIX_Message *message, MPI_Status *status); int MPIX_Imrecv(void *buf, int count, MPI_Datatype datatype, MPIX_Message *message, MPI_Request *request) ; int MPIX_Mprobe(int source, int tag, MPI_Comm comm, MPIX_Message *message, MPI_Status *status); int MPIX_Mrecv(void *buf, int count, MPI_Datatype datatype, MPIX_Message *message, MPI_Status *status) ; #line 1186 int MPIX_Comm_idup(MPI_Comm comm, MPI_Comm *newcomm, MPI_Request *request); #line 1189 int MPIX_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPIX_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Igather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Igatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iscatter(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iscatterv(const void *sendbuf, const int *sendcounts, const int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iallgather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iallgatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ialltoall(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ialltoallv(const void *sendbuf, const int *sendcounts, const int *sdispls, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ialltoallw(const void *sendbuf, const int *sendcounts, const int *sdispls, const MPI_Datatype *sendtypes, void *recvbuf, const int *recvcounts, const int *rdispls, const MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPIX_Ireduce(const void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iallreduce(const void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ireduce_scatter(const void *sendbuf, void *recvbuf, const int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ireduce_scatter_block(const void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iscan(const void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request) ; int MPIX_Iexscan(const void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request) ; #line 1208 int MPIX_Ineighbor_allgather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ineighbor_allgatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int recvcounts[], const int displs[], MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ineighbor_alltoall(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ineighbor_alltoallv(const void *sendbuf, const int sendcounts[], const int sdispls[], MPI_Datatype sendtype, void *recvbuf, const int recvcounts[], const int rdispls[], MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int MPIX_Ineighbor_alltoallw(const void *sendbuf, const int sendcounts[], const MPI_Aint sdispls[], const MPI_Datatype sendtypes[], void *recvbuf, const int recvcounts[], const MPI_Aint rdispls[], const MPI_Datatype recvtypes[], MPI_Comm comm, MPI_Request *request); int MPIX_Neighbor_allgather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm) ; int MPIX_Neighbor_allgatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int recvcounts[], const int displs[], MPI_Datatype recvtype, MPI_Comm comm) ; int MPIX_Neighbor_alltoall(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm) ; int MPIX_Neighbor_alltoallv(const void *sendbuf, const int sendcounts[], const int sdispls[], MPI_Datatype sendtype, void *recvbuf, const int recvcounts[], const int rdispls[], MPI_Datatype recvtype, MPI_Comm comm) ; int MPIX_Neighbor_alltoallw(const void *sendbuf, const int sendcounts[], const MPI_Aint sdispls[], const MPI_Datatype sendtypes[], void *recvbuf, const int recvcounts[], const MPI_Aint rdispls[], const MPI_Datatype recvtypes[], MPI_Comm comm); #line 1220 int MPIX_Comm_split_type(MPI_Comm comm, int split_type, int key, MPI_Info info, MPI_Comm *newcomm); #line 1223 int MPIX_Comm_create_group(MPI_Comm comm, MPI_Group group, int tag, MPI_Comm * newcomm); #line 1226 int MPIX_Comm_group_failed(MPI_Comm, MPI_Group *); int MPIX_Comm_remote_group_failed(MPI_Comm, MPI_Group *); int MPIX_Comm_reenable_anysource(MPI_Comm, MPI_Group *); #line 1231 struct mpixi_mutex_s; typedef struct mpixi_mutex_s * MPIX_Mutex; int MPIX_Mutex_create(int count, MPI_Comm comm, MPIX_Mutex *hdl); int MPIX_Mutex_free(MPIX_Mutex *hdl); int MPIX_Mutex_lock(MPIX_Mutex hdl, int mutex, int proc); int MPIX_Mutex_unlock(MPIX_Mutex hdl, int mutex, int proc); #line 1244 int MPIX_T_init_thread(int required, int *provided); int MPIX_T_finalize(void); int MPIX_T_enum_get_info(MPIX_T_enum enumtype, int num, char *name, int *name_len); int MPIX_T_enum_get_item(MPIX_T_enum enumtype, int num, int *value, char *name, int *name_len); int MPIX_T_cvar_get_num(int *num_cvar); int MPIX_T_cvar_get_info(int cvar_index, char *name, int *name_len, int *verbosity, MPI_Datatype *datatype, MPIX_T_enum *enumtype, char *desc, int *desc_len, int *bind, int *scope); int MPIX_T_cvar_handle_alloc(int cvar_index, void *obj_handle, MPIX_T_cvar_handle *handle, int *count); int MPIX_T_cvar_handle_free(MPIX_T_cvar_handle *handle); int MPIX_T_cvar_read(MPIX_T_cvar_handle handle, void *buf); int MPIX_T_cvar_write(MPIX_T_cvar_handle handle, void *buf); int MPIX_T_pvar_get_num(int *num_pvar); int MPIX_T_pvar_get_info(int pvar_index, char *name, int *name_len, int *verbosity, int *var_class, MPI_Datatype *datatype, MPIX_T_enum *enumtype, char *desc, int *desc_len, int *bind, int *readonly, int *continuous, int *atomic); int MPIX_T_pvar_session_create(MPIX_T_pvar_session *session); int MPIX_T_pvar_session_free(MPIX_T_pvar_session *session); int MPIX_T_pvar_handle_alloc(MPIX_T_pvar_session session, int pvar_index, void *obj_handle, MPIX_T_pvar_handle *handle, int *count); int MPIX_T_pvar_handle_free(MPIX_T_pvar_session session, MPIX_T_pvar_handle *handle); int MPIX_T_pvar_start(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle); int MPIX_T_pvar_stop(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle); int MPIX_T_pvar_read(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle, void *buf); int MPIX_T_pvar_write(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle, void *buf); int MPIX_T_pvar_reset(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle); int MPIX_T_pvar_readreset(MPIX_T_pvar_session session, MPIX_T_pvar_handle handle, void *buf); int MPIX_T_category_get_num(int *num_cat); int MPIX_T_category_get_info(int cat_index, char *name, int *name_len, char *desc, int *desc_len, int *num_controlvars, int *num_pvars, int *num_categories); int MPIX_T_category_get_cvars(int cat_index, int len, int indices[]); int MPIX_T_category_get_pvars(int cat_index[], int len, int indices[]); int MPIX_T_category_get_categories(int cat_index, int len, int indices[]); int MPIX_T_category_changed(int *stamp); #line 1280 int PMPI_Send( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int PMPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *) ; int PMPI_Get_count( MPI_Status *, MPI_Datatype, int *); int PMPI_Bsend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int PMPI_Ssend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int PMPI_Rsend( void*, int, MPI_Datatype, int, int, MPI_Comm) ; int PMPI_Buffer_attach( void* buffer, int); int PMPI_Buffer_detach( void* buffer, int *); int PMPI_Isend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Ibsend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Issend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Irsend( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Wait(MPI_Request *, MPI_Status *); int PMPI_Test(MPI_Request *, int *, MPI_Status *); int PMPI_Request_free(MPI_Request *); int PMPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int PMPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Waitall(int, MPI_Request *, MPI_Status *); int PMPI_Testall(int, MPI_Request *, int *, MPI_Status *); int PMPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int PMPI_Probe(int, int, MPI_Comm, MPI_Status *); int PMPI_Cancel(MPI_Request *); int PMPI_Test_cancelled( MPI_Status *, int *); int PMPI_Send_init( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Bsend_init( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Ssend_init( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Rsend_init( void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Recv_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *) ; int PMPI_Start(MPI_Request *); int PMPI_Startall(int, MPI_Request *); int PMPI_Sendrecv( void *, int, MPI_Datatype, int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *) ; int PMPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *) ; int PMPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int PMPI_Address( void*, MPI_Aint *); int PMPI_Type_extent(MPI_Datatype, MPI_Aint *); int PMPI_Type_size(MPI_Datatype, int *); int PMPI_Type_lb(MPI_Datatype, MPI_Aint *); int PMPI_Type_ub(MPI_Datatype, MPI_Aint *); int PMPI_Type_commit(MPI_Datatype *); int PMPI_Type_free(MPI_Datatype *); int PMPI_Get_elements( MPI_Status *, MPI_Datatype, int *); int PMPI_Pack( void*, int, MPI_Datatype, void *, int, int *, MPI_Comm) ; int PMPI_Unpack( void*, int, int *, void *, int, MPI_Datatype, MPI_Comm) ; int PMPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int PMPI_Barrier(MPI_Comm ); int PMPI_Bcast(void* buffer, int, MPI_Datatype, int, MPI_Comm ); int PMPI_Gather( void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int PMPI_Gatherv( void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm) ; int PMPI_Scatter( void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int PMPI_Scatterv( void* , int *, int *, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm) ; int PMPI_Allgather( void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm) ; int PMPI_Allgatherv( void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm) ; int PMPI_Alltoall( void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm) ; int PMPI_Alltoallv( void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm) ; int PMPI_Reduce( void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm) ; int PMPI_Op_create(MPI_User_function *, int, MPI_Op *); int PMPI_Op_free( MPI_Op *); int PMPI_Allreduce( void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Reduce_scatter( void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Scan( void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Group_size(MPI_Group, int *); int PMPI_Group_rank(MPI_Group, int *); int PMPI_Group_translate_ranks(MPI_Group, int, int *, MPI_Group, int *); int PMPI_Group_compare(MPI_Group, MPI_Group, int *); int PMPIX_Comm_group_failed(MPI_Comm, MPI_Group *); int PMPIX_Comm_reenable_anysource(MPI_Comm, MPI_Group *); int PMPIX_Comm_remote_group_failed(MPI_Comm, MPI_Group *); int PMPIX_Mutex_create(int count, MPI_Comm comm, MPIX_Mutex *hdl); int PMPIX_Mutex_free(MPIX_Mutex *hdl); int PMPIX_Mutex_lock(MPIX_Mutex hdl, int mutex, int proc); int PMPIX_Mutex_unlock(MPIX_Mutex hdl, int mutex, int proc); int PMPI_Comm_group(MPI_Comm, MPI_Group *); int PMPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_free(MPI_Group *); int PMPI_Comm_size(MPI_Comm, int *); int PMPI_Comm_rank(MPI_Comm, int *); int PMPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int PMPI_Comm_dup(MPI_Comm, MPI_Comm *); int PMPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int PMPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int PMPI_Comm_free(MPI_Comm *); int PMPI_Comm_test_inter(MPI_Comm, int *); int PMPI_Comm_remote_size(MPI_Comm, int *); int PMPI_Comm_remote_group(MPI_Comm, MPI_Group *); int PMPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm *); int PMPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int PMPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int PMPI_Keyval_free(int *); int PMPI_Attr_put(MPI_Comm, int, void*); int PMPI_Attr_get(MPI_Comm, int, void *, int *); int PMPI_Attr_delete(MPI_Comm, int); int PMPI_Topo_test(MPI_Comm, int *); int PMPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Dims_create(int, int, int *); int PMPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Graphdims_get(MPI_Comm, int *, int *); int PMPI_Graph_get(MPI_Comm, int, int, int *, int *); int PMPI_Cartdim_get(MPI_Comm, int *); int PMPI_Cart_get(MPI_Comm, int, int *, int *, int *); int PMPI_Cart_rank(MPI_Comm, int *, int *); int PMPI_Cart_coords(MPI_Comm, int, int, int *); int PMPI_Graph_neighbors_count(MPI_Comm, int, int *); int PMPI_Graph_neighbors(MPI_Comm, int, int, int *); int PMPI_Cart_shift(MPI_Comm, int, int, int *, int *); int PMPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int PMPI_Cart_map(MPI_Comm, int, int *, int *, int *); int PMPI_Graph_map(MPI_Comm, int, int *, int *, int *); int PMPI_Get_processor_name(char *, int *); int PMPI_Get_version(int *, int *); int PMPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int PMPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int PMPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int PMPI_Errhandler_free(MPI_Errhandler *); int PMPI_Error_string(int, char *, int *); int PMPI_Error_class(int, int *); #line 1413 int PMPI_Init(int *, char ***); int PMPI_Finalize(void); int PMPI_Initialized(int *); int PMPI_Abort(MPI_Comm, int); int PMPI_Pcontrol(const int, ...); #line 1423 int PMPI_Close_port( char *); int PMPI_Comm_accept( char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_connect( char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_disconnect(MPI_Comm *); int PMPI_Comm_get_parent(MPI_Comm *); int PMPI_Comm_join(int, MPI_Comm *); int PMPI_Comm_spawn( char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int PMPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int PMPI_Lookup_name( char *, MPI_Info, char *); int PMPI_Open_port(MPI_Info, char *); int PMPI_Publish_name( char *, MPI_Info, char *); int PMPI_Unpublish_name( char *, MPI_Info, char *); #line 1439 int PMPI_Accumulate( void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win) ; int PMPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win) ; int PMPI_Put( void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win) ; int PMPI_Win_complete(MPI_Win); int PMPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int PMPI_Win_fence(int, MPI_Win); int PMPI_Win_free(MPI_Win *); int PMPI_Win_get_group(MPI_Win, MPI_Group *); int PMPI_Win_lock(int, int, int, MPI_Win); int PMPI_Win_post(MPI_Group, int, MPI_Win); int PMPI_Win_start(MPI_Group, int, MPI_Win); int PMPI_Win_test(MPI_Win, int *); int PMPI_Win_unlock(int, MPI_Win); int PMPI_Win_wait(MPI_Win); #line 1458 int PMPIX_Win_allocate(MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, void *baseptr, MPI_Win *win); int PMPIX_Win_allocate_shared(MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, void *baseptr, MPI_Win *win); int PMPIX_Win_shared_query(MPI_Win win, int rank, MPI_Aint *size, int *disp_unit, void *baseptr); int PMPIX_Win_create_dynamic(MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPIX_Win_attach(MPI_Win win, void *base, MPI_Aint size); int PMPIX_Win_detach(MPI_Win win, const void *base); int PMPIX_Get_accumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, void *result_addr, int result_count, MPI_Datatype result_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPIX_Fetch_and_op(const void *origin_addr, void *result_addr, MPI_Datatype datatype, int target_rank, MPI_Aint target_disp, MPI_Op op, MPI_Win win); int PMPIX_Compare_and_swap(const void *origin_addr, const void *compare_addr, void *result_addr, MPI_Datatype datatype, int target_rank, MPI_Aint target_disp, MPI_Win win); int PMPIX_Rput(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win, MPI_Request *request); int PMPIX_Rget(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win, MPI_Request *request); int PMPIX_Raccumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win, MPI_Request *request); int PMPIX_Rget_accumulate(const void *origin_addr, int origin_count, MPI_Datatype origin_datatype, void *result_addr, int result_count, MPI_Datatype result_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win, MPI_Request *request); int PMPIX_Win_lock_all(int assert, MPI_Win win); int PMPIX_Win_unlock_all(MPI_Win win); int PMPIX_Win_flush(int rank, MPI_Win win); int PMPIX_Win_flush_all(MPI_Win win); int PMPIX_Win_flush_local(int rank, MPI_Win win); int PMPIX_Win_flush_local_all(MPI_Win win); int PMPIX_Win_sync(MPI_Win win); #line 1504 int PMPI_Alltoallw( void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int PMPI_Exscan( void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; #line 1510 int PMPI_Add_error_class(int *); int PMPI_Add_error_code(int, int *); int PMPI_Add_error_string(int, char *); int PMPI_Comm_call_errhandler(MPI_Comm, int); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int PMPI_Comm_delete_attr(MPI_Comm, int); int PMPI_Comm_free_keyval(int *); int PMPI_Comm_get_attr(MPI_Comm, int, void *, int *); int PMPI_Comm_get_name(MPI_Comm, char *, int *); int PMPI_Comm_set_attr(MPI_Comm, int, void *); int PMPI_Comm_set_name(MPI_Comm, char *); int PMPI_File_call_errhandler(MPI_File, int); int PMPI_Grequest_complete(MPI_Request); int PMPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int PMPI_Init_thread(int *, char ***, int, int *); int PMPI_Is_thread_main(int *); int PMPI_Query_thread(int *); int PMPI_Status_set_cancelled(MPI_Status *, int); int PMPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int PMPI_Type_delete_attr(MPI_Datatype, int); int PMPI_Type_dup(MPI_Datatype, MPI_Datatype *); int PMPI_Type_free_keyval(int *); int PMPI_Type_get_attr(MPI_Datatype, int, void *, int *); int PMPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int PMPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int PMPI_Type_get_name(MPI_Datatype, char *, int *); int PMPI_Type_set_attr(MPI_Datatype, int, void *); int PMPI_Type_set_name(MPI_Datatype, char *); int PMPI_Type_match_size( int, int, MPI_Datatype *); int PMPI_Win_call_errhandler(MPI_Win, int); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int PMPI_Win_delete_attr(MPI_Win, int); int PMPI_Win_free_keyval(int *); int PMPI_Win_get_attr(MPI_Win, int, void *, int *); int PMPI_Win_get_name(MPI_Win, char *, int *); int PMPI_Win_set_attr(MPI_Win, int, void *); int PMPI_Win_set_name(MPI_Win, char *); #line 1558 int PMPI_Type_create_f90_integer( int, MPI_Datatype * ); int PMPI_Type_create_f90_real( int, int, MPI_Datatype * ); int PMPI_Type_create_f90_complex( int, int, MPI_Datatype * ); #line 1563 int PMPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int PMPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int PMPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int PMPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int PMPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int PMPI_File_set_errhandler(MPI_File, MPI_Errhandler); int PMPI_Finalized(int *); int PMPI_Free_mem(void *); int PMPI_Get_address( void *, MPI_Aint *); int PMPI_Info_create(MPI_Info *); int PMPI_Info_delete(MPI_Info, char *); int PMPI_Info_dup(MPI_Info, MPI_Info *); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info, char *, int, char *, int *); int PMPI_Info_get_nkeys(MPI_Info, int *); int PMPI_Info_get_nthkey(MPI_Info, int, char *); int PMPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int PMPI_Info_set(MPI_Info, char *, char *); int PMPI_Pack_external( char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *) ; int PMPI_Pack_external_size( char *, int, MPI_Datatype, MPI_Aint *); int PMPI_Request_get_status(MPI_Request, int *, MPI_Status *); int PMPI_Status_c2f( MPI_Status *, MPI_Fint *); int PMPI_Status_f2c( MPI_Fint *, MPI_Status *); int PMPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int PMPIX_Type_create_hindexed_block(int, int, const MPI_Aint [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int PMPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int PMPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Unpack_external( char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype) ; int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int PMPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int PMPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int PMPI_Reduce_local( void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op) ; int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Reduce_scatter_block( void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) ; int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); int PMPIX_Comm_idup(MPI_Comm comm, MPI_Comm *newcomm, MPI_Request *request); int PMPIX_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPIX_Message *message, MPI_Status *status); int PMPIX_Imrecv(void *buf, int count, MPI_Datatype datatype, MPIX_Message *message, MPI_Request *request) ; int PMPIX_Mprobe(int source, int tag, MPI_Comm comm, MPIX_Message *message, MPI_Status *status); int PMPIX_Mrecv(void *buf, int count, MPI_Datatype datatype, MPIX_Message *message, MPI_Status *status) ; int PMPIX_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPIX_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Igather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Igatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Iscatter(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Iscatterv(const void *sendbuf, const int *sendcounts, const int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Iallgather(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Iallgatherv(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Ialltoall(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Ialltoallv(const void *sendbuf, const int *sendcounts, const int *sdispls, MPI_Datatype sendtype, void *recvbuf, const int *recvcounts, const int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request) ; int PMPIX_Ialltoallw(const void *sendbuf, const int *sendcounts, const int *sdispls, const MPI_Datatype *sendtypes, void *recvbuf, const int *recvcounts, const int *rdispls, const MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPIX_Ireduce(const void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request) ; Found header files ['mpi.h'] in ['/soft/compilers/wrappers/xl/include'] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:198) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:198) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /tmp/petsc-lj0zFz/config.packages.MPI sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPI_COMM_F2C" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPI_COMM_C2F" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:182) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:182) Check for functions added to the interface in MPI-2 sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPI_FINALIZED" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPI_IN_PLACE" to "1" ================================================================================ TEST configureTypes from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:218) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:218) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_MPI_COMM" to "4" Checking for size of type: MPI_Fint Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.types/conftest -O /tmp/petsc-lj0zFz/config.types/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: /tmp/petsc-lj0zFz/config.types/conftest Executing: /tmp/petsc-lj0zFz/config.types/conftest sh: Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:230) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:230) Checking for MPI Datatype handles sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.packages.MPI/conftest sh: /tmp/petsc-lj0zFz/config.packages.MPI/conftest Executing: /tmp/petsc-lj0zFz/config.packages.MPI/conftest sh: ERROR while running executable: Could not execute "/tmp/petsc-lj0zFz/config.packages.MPI/conftest": /bgsys/source/srcV1R2M1.26228/comm/sys/buildtools/pami/common/bgq/BgqPersonality.h:102: /bgsys/source/srcV1R2M1.26228/comm/sys/buildtools/pami/common/bgq/BgqPersonality.h<102> Popping language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Executing: /tmp/petsc-lj0zFz/config.packages.MPI/conftest sh: /tmp/petsc-lj0zFz/config.packages.MPI/conftest Executing: /tmp/petsc-lj0zFz/config.packages.MPI/conftest sh: ERROR while running executable: Could not execute "/tmp/petsc-lj0zFz/config.packages.MPI/conftest": /bgsys/source/srcV1R2M1.26228/comm/sys/buildtools/pami/common/bgq/BgqPersonality.h:102: /bgsys/source/srcV1R2M1.26228/comm/sys/buildtools/pami/common/bgq/BgqPersonality.h<102> Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:300) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:300) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:608) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:608) Returns true if SGI MPI is used Checking for function MPI_SGI_barrier in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `MPI_SGI_barrier' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `MPI_SGI_barrier' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:618) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:618) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -qrtti=dyna -O -+ -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -qrtti=dyna -O -+ -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for function MPI_Finalize in library [] [] Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -qrtti=dyna -O -+ -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -qrtti=dyna -O -+ -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { int ierr; ierr = MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/config.libraries/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/config.libraries/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:636) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:636) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main include 'mpif.h' end Checking for fortran mpi_init() Checking for function in library [] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main include 'mpif.h' integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language FC Checking for mpi.mod Checking for function in library [] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.libraries/conftest.F sh: Possible ERROR while running compiler: error message = {** main === End of Compilation 1 === 1501-510 Compilation successful for file conftest.F. } Source: program main use mpi integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpif90 -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:661) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:661) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest -O /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:698) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:698) Find MPI include paths from "mpicc -show" sh: mpicc -show Executing: mpicc -show sh: bgxlc_r -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -I/bgsys/drivers/V1R2M1/ppc64/comm/include -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread compilers: Checking arg bgxlc_r compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/comm/include compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/comm/include compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/comm/lib/xl compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64 compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64 compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/comm/sys/include compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/spi/include compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/spi/include compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/spi/lib compilers: Checking arg -I/bgsys/drivers/V1R2M1/ppc64/comm/include compilers: Found include directory: /bgsys/drivers/V1R2M1/ppc64/comm/include compilers: Checking arg -L/bgsys/drivers/V1R2M1/ppc64/comm/lib compilers: Checking arg -lmpich-xl compilers: Checking arg -lopa-xl compilers: Checking arg -lmpl-xl compilers: Checking arg -lpami-gcc compilers: Checking arg -lSPI compilers: Checking arg -lSPI_cnk compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lstdc++ compilers: Checking arg -lpthread Checking for function MPI_Alltoallw in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); int main() { MPI_Alltoallw() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Checking for function MPI_Type_create_indexed_block in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); int main() { MPI_Type_create_indexed_block() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for function MPI_Comm_spawn in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); int main() { MPI_Comm_spawn() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Checking for function MPI_Win_create in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); int main() { MPI_Win_create() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for function MPI_Init_thread in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); int main() { MPI_Init_thread() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_INIT_THREAD" to "1" Checking for function MPIX_Iallreduce in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); int main() { MPIX_Iallreduce() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPIX_IALLREDUCE" to "1" Checking for function MPI_Finalized in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Finalized(); int main() { MPI_Finalized() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_FINALIZED" to "1" Checking for function MPI_Exscan in library [] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Exscan(); int main() { MPI_Exscan() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_MPI_EXSCAN" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:132) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:132) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/MPI.py:145) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:145) Checking for mpiexec Pushing language C Popping language C Checking for program /soft/compilers/wrappers/xl/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/mpd/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/bin/mpirun...not found Checking for program /soft/compilers/wrappers/xl/bin/mprun...not found Checking for program /soft/compilers/wrappers/mpd/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/mpd/bin/mpirun...not found Checking for program /soft/compilers/wrappers/mpd/bin/mprun...not found Checking for program /soft/compilers/wrappers/mpd/bin/mpiexec...not found Checking for program /soft/compilers/wrappers/mpd/bin/mpirun...not found Checking for program /soft/compilers/wrappers/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/lib/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/bin/mprun...not found Checking for program /bgsys/drivers/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/mpd/bin/mprun...not found Checking for program /bgsys/drivers/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/sys/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/spi/include/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/comm/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/mpd/bin/mprun...not found Checking for program /soft/perftools/darshan/darshan/bin/mpiexec...not found Checking for program /soft/perftools/darshan/darshan/bin/mpirun...not found Checking for program /soft/perftools/darshan/darshan/bin/mprun...not found Checking for program /soft/perftools/darshan/darshan/bin/mpiexec...not found Checking for program /soft/perftools/darshan/darshan/bin/mpirun...not found Checking for program /soft/perftools/darshan/darshan/bin/mprun...not found Checking for program /soft/compilers/wrappers/xl/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/mpirun...not found Checking for program /soft/compilers/wrappers/xl/mprun...not found Checking for program /soft/compilers/wrappers/xl/mpiexec...not found Checking for program /soft/compilers/wrappers/xl/mpirun...not found Checking for program /soft/compilers/wrappers/xl/mprun...not found Checking for program /home/pwang/bin/mpiexec...not found Checking for program /home/pwang/bin/mpirun...not found Checking for program /home/pwang/bin/mprun...not found Checking for program /home/pwang/bin/mpiexec...not found Checking for program /home/pwang/bin/mpirun...not found Checking for program /home/pwang/bin/mprun...not found Checking for program /soft/environment/softenv-1.6.2/bin/mpiexec...not found Checking for program /soft/environment/softenv-1.6.2/bin/mpirun...not found Checking for program /soft/environment/softenv-1.6.2/bin/mprun...not found Checking for program /soft/environment/softenv-1.6.2/bin/mpiexec...not found Checking for program /soft/environment/softenv-1.6.2/bin/mpirun...not found Checking for program /soft/environment/softenv-1.6.2/bin/mprun...not found Checking for program /bin/mpiexec...not found Checking for program /bin/mpirun...not found Checking for program /bin/mprun...not found Checking for program /bin/mpiexec...not found Checking for program /bin/mpirun...not found Checking for program /bin/mprun...not found Checking for program /usr/bin/mpiexec...not found Checking for program /usr/bin/mpirun...not found Checking for program /usr/bin/mprun...not found Checking for program /usr/bin/mpiexec...not found Checking for program /usr/bin/mpirun...not found Checking for program /usr/bin/mprun...not found Checking for program /usr/local/bin/mpiexec...not found Checking for program /usr/local/bin/mpirun...not found Checking for program /usr/local/bin/mprun...not found Checking for program /usr/local/bin/mpiexec...not found Checking for program /usr/local/bin/mpirun...not found Checking for program /usr/local/bin/mprun...not found Checking for program /usr/X11R6/bin/mpiexec...not found Checking for program /usr/X11R6/bin/mpirun...not found Checking for program /usr/X11R6/bin/mprun...not found Checking for program /usr/X11R6/bin/mpiexec...not found Checking for program /usr/X11R6/bin/mpirun...not found Checking for program /usr/X11R6/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mprun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mpiexec...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mpirun...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/mprun...not found Checking for program /soft/debuggers/scripts/bin/mpiexec...not found Checking for program /soft/debuggers/scripts/bin/mpirun...not found Checking for program /soft/debuggers/scripts/bin/mprun...not found Checking for program /soft/debuggers/scripts/bin/mpiexec...not found Checking for program /soft/debuggers/scripts/bin/mpirun...not found Checking for program /soft/debuggers/scripts/bin/mprun...not found Checking for program /soft/accttools/bin/mpiexec...not found Checking for program /soft/accttools/bin/mpirun...not found Checking for program /soft/accttools/bin/mprun...not found Checking for program /soft/accttools/bin/mpiexec...not found Checking for program /soft/accttools/bin/mpirun...not found Checking for program /soft/accttools/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mprun...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mpiexec...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mpirun...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/mprun...not found Checking for program /home/pwang/mpiexec...not found Checking for program /home/pwang/mpirun...not found Checking for program /home/pwang/mprun...not found Checking for program /home/pwang/mpiexec...not found Checking for program /home/pwang/mpirun...not found Checking for program /home/pwang/mprun...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mpiexec...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mpirun...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mprun...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mpiexec...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mpirun...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/mprun...not found Checking for program /bin/false...found Defined make macro "MPIEXEC" to "/bin/false" sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C sh: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a Executing: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.packages.MPI/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C sh: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a Executing: /usr/bin/ar cr /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a /tmp/petsc-lj0zFz/config.packages.MPI/conftest.o ; /usr/bin/ranlib /tmp/petsc-lj0zFz/config.packages.MPI/libconftest.a sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/tmp/petsc-lj0zFz/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/tmp/petsc-lj0zFz/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0x30): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0x30): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/tmp/petsc-lj0zFz/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/tmp/petsc-lj0zFz/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Executing: /bin/false /tmp/petsc-lj0zFz/config.libraries/conftest sh: /bin/false /tmp/petsc-lj0zFz/config.libraries/conftest Executing: /bin/false /tmp/petsc-lj0zFz/config.libraries/conftest sh: ERROR while running executable: Could not execute "/bin/false /tmp/petsc-lj0zFz/config.libraries/conftest": Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.thrust(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.txpetscgpu(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.txpetscgpu(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.utilities.scalarTypes(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/scalarTypes.py:37) TESTING: configureScalarType from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_ISNAN" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_ISINF" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o:(.text+0x1c): undefined reference to `_isnan' output: ret = 256 error message = {/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o:(.text+0x1c): undefined reference to `_isnan' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o:(.text+0x1c): undefined reference to `_finite' output: ret = 256 error message = {/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o:(.text+0x1c): undefined reference to `_finite' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest -O /tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Popping language C ================================================================================ TEST configurePrecision from PETSc.utilities.scalarTypes(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/scalarTypes.py:75) TESTING: configurePrecision from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:75) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Precision is double ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:452) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:452) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS and LAPACK libraries ================================================================================ TEST checkLib from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:112) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:112) Checking for BLAS and LAPACK symbols Checking for function ddot in library ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a'] ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBBLAS" to "1" Popping language C Checking for function dgetrs in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Found Fortran mangling on BLAS/LAPACK which is unchanged Checking for function df2cblaslapack311_id in library ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `df2cblaslapack311_id' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `df2cblaslapack311_id' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Popping language C ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:560) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:560) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:506) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:506) Check for the IBM ESSL library Checking for function iessl in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); int main() { iessl() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `iessl' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `iessl' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); int main() { iessl() ; return 0; } Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:512) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:512) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for function pdgemm in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pdgemm(); int main() { pdgemm() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `pdgemm' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `pdgemm' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pdgemm(); int main() { pdgemm() ; return 0; } Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:518) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:518) Check for missing LAPACK routines Checking for function dtrsen in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen(); int main() { dtrsen() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgerfs in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgerfs(); int main() { dgerfs() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgges in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgges(); int main() { dgges() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dtgsen in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtgsen(); int main() { dtgsen() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgesvd in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgesvd(); int main() { dgesvd() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgetrf in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrf(); int main() { dgetrf() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgetrs in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgeev in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgelss in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgelss(); int main() { dgelss() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dsyev in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsyev(); int main() { dsyev() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dsyevx in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsyevx(); int main() { dsyevx() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dsygv in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsygv(); int main() { dsygv() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dsygvx in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsygvx(); int main() { dsygvx() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dpotrf in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpotrf(); int main() { dpotrf() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dpotrs in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpotrs(); int main() { dpotrs() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dstebz in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dstebz(); int main() { dstebz() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dpttrf in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpttrf(); int main() { dpttrf() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dpttrs in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpttrs(); int main() { dpttrs() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dstein in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dstein(); int main() { dstein() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dorgqr in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dorgqr(); int main() { dorgqr() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgeqrf in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeqrf(); int main() { dgeqrf() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgesv in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgesv(); int main() { dgesv() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dhseqr in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dhseqr(); int main() { dhseqr() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C Checking for function dgeqrf in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a'] ['/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeqrf(); int main() { dgeqrf() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/packages/BlasLapack.py:538) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:538) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for function lsame in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a', '/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame(); int main() { lsame() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Defined "HAVE_LIBBLAS" to "1" Defined "HAVE_LIBMPICHF90_XL" to "1" Defined "HAVE_LIBXLF90_R" to "1" Defined "HAVE_LIBXLOMP_SER" to "1" Defined "HAVE_LIBXLFMATH" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.UMFPACK(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.UMFPACK(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.CHOLMOD(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from config.packages.CHOLMOD(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibraryOptions from PETSc.utilities.libraryOptions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/libraryOptions.py:48) TESTING: configureLibraryOptions from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:48) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for function bgl_perfctr_void in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `bgl_perfctr_void' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `bgl_perfctr_void' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Popping language C Checking for function ADIOI_BGL_Open in library [''] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `ADIOI_BGL_Open' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `ADIOI_BGL_Open' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Popping language C *********BGL/IBM test failure Defined "PETSC_USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.utilities.libraryOptions(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/libraryOptions.py:92) TESTING: configureISColorValueType from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:92) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Sieve(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Sieve(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpe(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.mpe(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PARTY(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.PARTY(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.tetgen(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.tetgen(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Chaco(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Chaco(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.papi(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.papi(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Dscpack(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Dscpack(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.FFC(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.FFC(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ctetgen(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.ctetgen(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ccafe(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.ccafe(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PTScotch(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.PTScotch(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PaStiX(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.PaStiX(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.java(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.java(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ams(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.ams(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.fftw(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.fftw(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need c2html ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pcbddc(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.pcbddc(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.oski(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.oski(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Generator(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Generator(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pami(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.pami(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SuperLU(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.SuperLU(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.openmp(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.openmp(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.pthread(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/packages/pthread.py:27) TESTING: configureLibrary from PETSc.packages.pthread(config/PETSc/packages/pthread.py:27) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Package specific search directory PTHREAD: ['libpthread.a'] ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function pthread_create in library ['libpthread.a'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lpthread -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -lpthread -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBPTHREAD" to "1" Popping language C Checking for headers Package specific search directory PTHREAD: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 76 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __time_t time_t; #line 120 struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 37 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" typedef __pid_t pid_t; #line 74 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sched.h" struct sched_param { int __sched_priority; }; #line 83 extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; #line 87 extern int unshare (int __flags) ; #line 90 extern int sched_getcpu (void) ; #line 101 struct __sched_param { int __sched_priority; }; #line 116 typedef unsigned long int __cpu_mask; #line 123 typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 201 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; #line 55 extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; #line 58 extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; #line 62 extern int sched_getscheduler (__pid_t __pid) ; #line 65 extern int sched_yield (void) ; #line 68 extern int sched_get_priority_max (int __algorithm) ; #line 71 extern int sched_get_priority_min (int __algorithm) ; #line 74 extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 133 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; #line 146 long int tm_gmtoff; const char *tm_zone; #line 152 }; #line 161 struct itimerspec { struct timespec it_interval; struct timespec it_value; }; #line 168 struct sigevent; #line 183 extern clock_t clock (void) ; #line 186 extern time_t time (time_t *__timer) ; #line 189 extern double difftime (time_t __time1, time_t __time0) __attribute__ ((const)); #line 193 extern time_t mktime (struct tm *__tp) ; #line 199 extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) ; #line 28 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/xlocale.h" typedef struct __locale_struct { struct __locale_data *__locales[13]; #line 34 const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; #line 39 const char *__names[13]; } *__locale_t; #line 43 typedef __locale_t locale_t; #line 217 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) ; #line 233 extern struct tm *gmtime (const time_t *__timer) ; #line 237 extern struct tm *localtime (const time_t *__timer) ; #line 243 extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 248 extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) ; #line 255 extern char *asctime (const struct tm *__tp) ; #line 258 extern char *ctime (const time_t *__timer) ; #line 266 extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) ; #line 270 extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) ; #line 276 extern char *__tzname[2]; extern int __daylight; extern long int __timezone; #line 283 extern char *tzname[2]; #line 287 extern void tzset (void) ; #line 291 extern int daylight; extern long int timezone; #line 298 extern int stime (const time_t *__when) ; #line 313 extern time_t timegm (struct tm *__tp) ; #line 316 extern time_t timelocal (struct tm *__tp) ; #line 319 extern int dysize (int __year) __attribute__ ((const)); #line 328 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); #line 333 extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; #line 336 extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; #line 339 extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; #line 347 extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); #line 352 extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; #line 357 extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) ; #line 362 extern int timer_delete (timer_t __timerid) ; #line 365 extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) ; #line 370 extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; #line 374 extern int timer_getoverrun (timer_t __timerid) ; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 44 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/setjmp.h" typedef long int __jmp_buf[64] __attribute__ ((__aligned__ (16))); #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; #line 44 enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL #line 61 }; #line 66 enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; #line 115 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 147 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; #line 157 enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; #line 167 enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; #line 182 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; #line 191 enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; #line 225 extern int pthread_create (pthread_t *__restrict __newthread, const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) ; #line 234 extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); #line 242 extern int pthread_join (pthread_t __th, void **__thread_return); #line 263 extern int pthread_detach (pthread_t __th) ; #line 267 extern pthread_t pthread_self (void) __attribute__ ((const)); #line 270 extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; #line 278 extern int pthread_attr_init (pthread_attr_t *__attr) ; #line 281 extern int pthread_attr_destroy (pthread_attr_t *__attr) ; #line 285 extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; #line 290 extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; #line 296 extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; #line 301 extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; #line 307 extern int pthread_attr_getschedparam (const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) ; #line 313 extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, const struct sched_param *__restrict __param) ; #line 318 extern int pthread_attr_getschedpolicy (const pthread_attr_t *__restrict __attr, int *__restrict __policy) ; #line 323 extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; #line 327 extern int pthread_attr_getinheritsched (const pthread_attr_t *__restrict __attr, int *__restrict __inherit) ; #line 332 extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; #line 338 extern int pthread_attr_getscope (const pthread_attr_t *__restrict __attr, int *__restrict __scope) ; #line 343 extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; #line 347 extern int pthread_attr_getstackaddr (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__deprecated__)); #line 355 extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__deprecated__)); #line 360 extern int pthread_attr_getstacksize (const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) ; #line 367 extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; #line 373 extern int pthread_attr_getstack (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) ; #line 381 extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 413 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; #line 418 extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) ; #line 424 extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 478 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; #line 490 extern int pthread_setcancelstate (int __state, int *__oldstate); #line 494 extern int pthread_setcanceltype (int __type, int *__oldtype); #line 497 extern int pthread_cancel (pthread_t __th); #line 502 extern void pthread_testcancel (void); #line 507 typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); #line 524 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 664 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 676 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 717 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; #line 726 struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; #line 733 extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; #line 738 extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; #line 742 extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; #line 746 extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; #line 751 extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 757 extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 762 extern int pthread_mutex_getprioceiling (const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) ; #line 769 extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) ; #line 777 extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) ; #line 790 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; #line 794 extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; #line 798 extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) ; #line 804 extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 810 extern int pthread_mutexattr_gettype (const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) ; #line 817 extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) ; #line 822 extern int pthread_mutexattr_getprotocol (const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) ; #line 829 extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) ; #line 834 extern int pthread_mutexattr_getprioceiling (const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) ; #line 840 extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) ; #line 846 extern int pthread_mutexattr_getrobust (const pthread_mutexattr_t *__attr, int *__robustness) ; #line 856 extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) ; #line 872 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, const pthread_rwlockattr_t *__restrict __attr) ; #line 877 extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; #line 881 extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; #line 885 extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; #line 890 extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 896 extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; #line 900 extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; #line 905 extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) ; #line 911 extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; #line 918 extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; #line 922 extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; #line 926 extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) ; #line 932 extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; #line 937 extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) ; #line 943 extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; #line 952 extern int pthread_cond_init (pthread_cond_t *__restrict __cond, const pthread_condattr_t *__restrict __cond_attr) ; #line 957 extern int pthread_cond_destroy (pthread_cond_t *__cond) ; #line 961 extern int pthread_cond_signal (pthread_cond_t *__cond) ; #line 965 extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; #line 973 extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) ; #line 984 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) ; #line 992 extern int pthread_condattr_init (pthread_condattr_t *__attr) ; #line 996 extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; #line 1000 extern int pthread_condattr_getpshared (const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1006 extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; #line 1011 extern int pthread_condattr_getclock (const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) ; #line 1017 extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; #line 1028 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; #line 1032 extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; #line 1036 extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; #line 1040 extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; #line 1044 extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; #line 1052 extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, const pthread_barrierattr_t *__restrict __attr, unsigned int __count) ; #line 1058 extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; #line 1062 extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; #line 1067 extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; #line 1071 extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; #line 1075 extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) ; #line 1081 extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; #line 1095 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; #line 1100 extern int pthread_key_delete (pthread_key_t __key) ; #line 1103 extern void *pthread_getspecific (pthread_key_t __key) ; #line 1106 extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; #line 1112 extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; #line 1129 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; Found header files ['pthread.h'] in [] Popping language C All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.packages.pthread sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -O /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -O /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -O /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/PETSc.packages.pthread/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 11 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 60 struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); #line 32 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/sysctl.h" struct completion; #line 39 struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; #line 55 enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; #line 75 enum { CTL_BUS_ISA=1 }; #line 81 enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; #line 89 enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; #line 166 enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, }; #line 207 enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; #line 233 enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; #line 244 enum { PTY_MAX=1, PTY_NR=2 }; #line 251 enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; #line 259 enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; #line 291 enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; #line 299 enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; #line 336 enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 #line 463 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, NET_IPV4_CONF_ARP_NOTIFY=22, NET_IPV4_CONF_ACCEPT_LOCAL=23, NET_IPV4_CONF_SRC_VMARK=24, NET_IPV4_CONF_PROXY_ARP_PVLAN=25, __NET_IPV4_CONF_MAX }; #line 496 enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; #line 529 enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; #line 584 enum { NET_IPV6_ICMP_RATELIMIT=1 }; #line 589 enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; #line 612 enum { NET_DCCP_DEFAULT=1, }; #line 617 enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; #line 623 enum { NET_LLC2=1, NET_LLC_STATION=2, }; #line 629 enum { NET_LLC2_TIMEOUT=1, }; #line 634 enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; #line 639 enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; #line 647 enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; #line 656 enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; #line 672 enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; #line 690 enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; #line 704 enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; #line 714 enum { NET_TR_RIF_TIMEOUT=1 }; #line 720 enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; #line 739 enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 #line 748 }; #line 751 enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; #line 762 enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; #line 783 enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; #line 792 enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; #line 811 enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; #line 837 enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; #line 852 enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; #line 863 enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; #line 873 enum { DEV_PARPORT_DEFAULT=-3 }; #line 878 enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; #line 884 enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; #line 890 enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; #line 901 enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; #line 906 enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; #line 911 enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; #line 921 enum { DEV_SCSI_LOGGING_LEVEL=1, }; #line 926 enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; #line 931 enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; #line 69 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysctl.h" extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) ; Possible ERROR while running preprocessor: "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. error message = {"/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-312 (W) Compiler internal name __FUNCTION__ has been defined as a macro. "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/linux/kernel.h", line 46.9: 1506-236 (W) Macro name __FUNCTION__ has been redefined. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST checkSharedLibrary from PETSc.packages.pthread(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:487) TESTING: checkSharedLibrary from PETSc.packages.pthread(config/BuildSystem/config/package.py:487) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.server(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.server(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pthreadclasses(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.pthreadclasses(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.cuda(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.cuda(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.yaml(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.yaml(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.spooles(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.spooles(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sundials(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.sundials(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PVODE(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.PVODE(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default sh: uname -s Executing: uname -s sh: Linux Checking for function dgels in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a', '/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels(); int main() { dgels() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Defined "HAVE_LIBBLAS" to "1" Defined "HAVE_LIBMPICHF90_XL" to "1" Defined "HAVE_LIBXLF90_R" to "1" Defined "HAVE_LIBXLOMP_SER" to "1" Defined "HAVE_LIBXLFMATH" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found dgels() in Lapack library as needed by hypre Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.hypre(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:433) TESTING: configureLibrary from PETSc.packages.hypre(config/BuildSystem/config/package.py:433) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hypre Looking for HYPRE in directory starting with hypre Found a copy of HYPRE in hypre-2.8.0b Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Have to rebuild hypre, /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/hypre != /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/hypre =============================================================================== Configuring hypre; this may take several minutes =============================================================================== sh: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src && touch config/Makefile.config && make distclean && ./configure --prefix=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt --libdir=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib CC="mpicc" CFLAGS=" -O " CXX="mpicxx -qrtti=dyna -O -+ " F77="mpif90 -O " --with-MPI-include="/soft/compilers/wrappers/xl/include" --with-MPI-lib-dirs="" --with-MPI-libs="" --with-blas-libs= --with-blas-lib-dir= --with-lapack-libs= --with-lapack-lib-dir= --with-blas=yes --with-lapack=yes --with-fmangle-blas=no-underscores --with-fmangle-lapack=no-underscores --without-babel --without-mli --without-fei --without-superlu Executing: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src && touch config/Makefile.config && make distclean && ./configure --prefix=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt --libdir=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib CC="mpicc" CFLAGS=" -O " CXX="mpicxx -qrtti=dyna -O -+ " F77="mpif90 -O " --with-MPI-include="/soft/compilers/wrappers/xl/include" --with-MPI-lib-dirs="" --with-MPI-libs="" --with-blas-libs= --with-blas-lib-dir= --with-lapack-libs= --with-lapack-lib-dir= --with-blas=yes --with-lapack=yes --with-fmangle-blas=no-underscores --with-fmangle-lapack=no-underscores --without-babel --without-mli --without-fei --without-superlu sh: Dist-Cleaning utilities ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' rm -f *.o libHYPRE* f2c.h *blas.h *lapack.h rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' Dist-Cleaning multivector ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' Dist-Cleaning krylov ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' Dist-Cleaning seq_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' Dist-Cleaning parcsr_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' rm -f *.o libHYPRE* rm -f driver driver_matvec driver_matmul rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' Dist-Cleaning parcsr_block_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' rm -rf *.o libHYPRE_* rm -f driver driver_matvec driver_matmul make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' Dist-Cleaning distributed_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' Dist-Cleaning IJ_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' Dist-Cleaning matrix_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' rm -f *.o lib* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' Dist-Cleaning distributed_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Dist-Cleaning parcsr_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' Dist-Cleaning struct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' Dist-Cleaning struct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' Dist-Cleaning sstruct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' Dist-Cleaning sstruct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' Dist-Cleaning lib ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Dist-Cleaning docs ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/docs' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/docs' Dist-Cleaning test ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/test' rm -f *.o rm -rf pchdir tca.map *inslog* rm -f ij ij_mv new_ij sstruct sstruct_fac struct maxwell_unscaled ams_driver rm -f ex1_for ex3_for ex5_for ex6_for ex7_for rm -f f77_ij f77_ij_mv f77_struct rm -f struct_b sstruct_b ij_b rm -f rm -f f77_ij_b f77_struct_b rm -f fei cxx_ij cxx_sstruct cxx_struct cxx_* rm -f TEST_examples/*.out* rm -f TEST_examples/*.err* rm -f TEST_fac/*.out* rm -f TEST_fac/*.err* rm -f TEST_ij/*.out* rm -f TEST_ij/*.err* rm -f TEST_ij/*.txt* rm -f TEST_ij/vectors.* rm -f TEST_sstruct/*.out* rm -f TEST_sstruct/*.err* rm -f TEST_struct/*.out* rm -f TEST_struct/*.err* rm -f ex1 ex2 ex3 ex4 ex5 ex5b ex5b77 ex6 ex7 ex8 ex9 make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/test' Dist-Cleaning seq_ls/pamg ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_ls/pamg' rm -f *.o lib* rm -f driver make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_ls/pamg' rm -rf tca.map pchdir *inslog* rm -rf ./config/Makefile.config rm -rf ./TAGS rm -rf ./autom4te.cache rm -rf ./config.log rm -rf ./config.status rm -rf ./HYPRE_config.h checking build system type... powerpc64-unknown-linux-gnu checking host system type... powerpc64-unknown-linux-gnu checking whether make sets $(MAKE)... yes checking for ranlib... ranlib checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... no checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... no checking whether mpicxx -qrtti=dyna -O -+ accepts -g... yes checking whether we are using the GNU Fortran 77 compiler... no checking whether mpif90 -O accepts -g... yes checking how to get verbose linking output from mpif90 -O ... -v checking for Fortran 77 libraries of mpif90 -O ... -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlf90_r -lxlopt -lxlomp_ser -lxl -lxlfmath -ldl -lm -lnss_files -lnss_dns -lresolv checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, no underscore, no extra underscore checking for MPI_Init... yes checking for mpi.h... yes checking for MPI_Comm_f2c... no checking for cabs in -lm... yes checking the hostname... vestalac1 checking the architecture... linux-rhel_6-ppc64 configure: creating ./config.status config.status: creating config/Makefile.config config.status: creating HYPRE_config.h =============================================================================== Compiling hypre; this may take several minutes =============================================================================== sh: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src && make install Executing: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src && make install sh: Making utilities ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c amg_linklist.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c binsearch.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c exchange_data.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c fortran_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_ap.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_printf.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_memory.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_qsort.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c memory_dmalloc.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c mpistubs.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c qsplit.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c random.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c threading.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c thread_mpistubs.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c timer.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c timing.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c umalloc_local.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_mpi_comm_f2c.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_error.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c F90_HYPRE_error.c Building libHYPRE_utilities.a ... ar -rcu libHYPRE_utilities.a *.o ranlib libHYPRE_utilities.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_utilities.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./fortran*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' Making multivector ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' mpicc -O -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c multivector.c mpicc -O -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c temp_multivector.c Building libHYPRE_multivector.a ... ar -rcu libHYPRE_multivector.a multivector.o temp_multivector.o ranlib libHYPRE_multivector.a cp -fR *.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' Making krylov ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c cgnr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_cgnr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_lobpcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c lobpcg.c Building libHYPRE_krylov.a ... ar -rcu libHYPRE_krylov.a bicgstab.o cgnr.o gmres.o flexgmres.o lgmres.o HYPRE_bicgstab.o HYPRE_cgnr.o HYPRE_gmres.o HYPRE_lgmres.o HYPRE_flexgmres.o HYPRE_pcg.o pcg.o HYPRE_lobpcg.o lobpcg.o ranlib libHYPRE_krylov.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./krylov.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./lobpcg.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' Making seq_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c genpart.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_mapped_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_multiblock_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c mapped_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c multiblock_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c vector.c Building libHYPRE_seq_mv.a ... ar -rcu libHYPRE_seq_mv.a csr_matop.o csr_matrix.o csr_matvec.o genpart.o HYPRE_csr_matrix.o HYPRE_mapped_matrix.o HYPRE_multiblock_matrix.o HYPRE_vector.o mapped_matrix.o multiblock_matrix.o vector.o ranlib libHYPRE_seq_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./seq_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' Making parcsr_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c communicationT.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c new_commpkg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c numbers.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_aat.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_assumed_part.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_bool_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_bool_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matop_marked.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_make_system.c Building libHYPRE_parcsr_mv.a ... ar -rcu libHYPRE_parcsr_mv.a communicationT.o F90_HYPRE_parcsr_matrix.o F90_HYPRE_parcsr_vector.o F90_parcsr_matrix.o F90_par_vector.o HYPRE_parcsr_matrix.o HYPRE_parcsr_vector.o new_commpkg.o numbers.o par_csr_aat.o par_csr_assumed_part.o par_csr_bool_matop.o par_csr_bool_matrix.o par_csr_communication.o par_csr_matop.o par_csr_matrix.o par_csr_matop_marked.o par_csr_matvec.o par_vector.o par_make_system.o ranlib libHYPRE_parcsr_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' Making parcsr_block_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c csr_block_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c csr_block_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_comm.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_rap_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_block_nodal_systems.c Building libHYPRE_parcsr_block_mv.a ... ar -rcu libHYPRE_parcsr_block_mv.a csr_block_matrix.o csr_block_matvec.o par_csr_block_matrix.o par_csr_block_matvec.o par_csr_block_comm.o par_csr_block_rap.o par_csr_block_rap_communication.o par_csr_block_interp.o par_csr_block_relax.o par_block_nodal_systems.o ranlib libHYPRE_parcsr_block_mv.a cp -fR ./par_csr_block_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./csr_block_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' Making distributed_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_distributed_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_ISIS.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_PETSc.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_parcsr.c Building libHYPRE_DistributedMatrix.a ... ar -rcu libHYPRE_DistributedMatrix.a distributed_matrix.o HYPRE_distributed_matrix.o distributed_matrix_ISIS.o distributed_matrix_PETSc.o distributed_matrix_parcsr.o ranlib libHYPRE_DistributedMatrix.a cp -fR ./distributed_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' Making IJ_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c aux_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c aux_par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJMatrix_parcsr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJVector_parcsr.c Building libHYPRE_IJ_mv.a ... ar -rcu libHYPRE_IJ_mv.a aux_parcsr_matrix.o aux_par_vector.o F90_HYPRE_IJMatrix.o F90_HYPRE_IJVector.o F90_IJMatrix.o HYPRE_IJMatrix.o HYPRE_IJVector.o IJMatrix.o IJMatrix_parcsr.o IJVector.o IJVector_parcsr.o ranlib libHYPRE_IJ_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_IJ_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' Making matrix_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ConvertParCSRMatrixToDistributedMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ConvertPETScMatrixToDistributedMatrix.c Building libHYPRE_MatrixMatrix.a ... ar -rcu libHYPRE_MatrixMatrix.a HYPRE_ConvertParCSRMatrixToDistributedMatrix.o HYPRE_ConvertPETScMatrixToDistributedMatrix.o ranlib libHYPRE_MatrixMatrix.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' Making distributed_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Making pilut ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c comm.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c debug.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c distributed_qsort.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c distributed_qsort_si.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c HYPRE_DistributedMatrixPilutSolver.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c parilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c parutil.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c pblas1.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c serilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c trifactor.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c util.c Building libHYPRE_DistributedMatrixPilutSolver.a ... ar -rcu libHYPRE_DistributedMatrixPilutSolver.a comm.o debug.o distributed_qsort.o distributed_qsort_si.o HYPRE_DistributedMatrixPilutSolver.o ilut.o parilut.o parutil.o pblas1.o serilut.o trifactor.o util.o ranlib libHYPRE_DistributedMatrixPilutSolver.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' Making ParaSails ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ConjGrad.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c DiagScale.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c FGmres.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Hash.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c hypre_ParaSails.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c LoadBal.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Matrix.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Mem.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Numbering.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c OrderStat.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ParaSails.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c PrunedRows.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c RowPatt.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c StoredRows.c Building libHYPRE_ParaSails.a ... ar -rcu libHYPRE_ParaSails.a ConjGrad.o DiagScale.o FGmres.o Hash.o hypre_ParaSails.o LoadBal.o Matrix.o Mem.o Numbering.o OrderStat.o ParaSails.o PrunedRows.o RowPatt.o StoredRows.o ranlib libHYPRE_ParaSails.a make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' Making Euclid ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c blas_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Euclid_apply.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Euclid_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ExternalRows_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Factor_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c getRow_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c globalObjects.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Hash_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Hash_i_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_mpi_bj.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_mpi_pilu.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_seq.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c io_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c krylov_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Mat_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c mat_dh_private.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c MatGenFD.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Mem_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Numbering_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Parser_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c shellSort_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c sig_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SortedList_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SortedSet_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SubdomainGraph_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c TimeLog_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Timer_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Vec_dh.c Building libHYPRE_Euclid.a ... ar -rcu libHYPRE_Euclid.a blas_dh.o Euclid_apply.o Euclid_dh.o ExternalRows_dh.o Factor_dh.o getRow_dh.o globalObjects.o Hash_dh.o Hash_i_dh.o ilu_mpi_bj.o ilu_mpi_pilu.o ilu_seq.o io_dh.o krylov_dh.o Mat_dh.o mat_dh_private.o MatGenFD.o Mem_dh.o Numbering_dh.o Parser_dh.o shellSort_dh.o sig_dh.o SortedList_dh.o SortedSet_dh.o SubdomainGraph_dh.o TimeLog_dh.o Timer_dh.o Vec_dh.o ranlib libHYPRE_Euclid.a make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Making parcsr_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c amg_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c aux_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_hypre_laplace.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_bicgstab.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_block.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_cgnr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_Euclid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_gmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_flexgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_lgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_int.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_ParaSails.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_pcg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_pilut.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c gen_redcs_mat.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_bicgstab.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_block.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_cgnr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_Euclid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_gmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_flexgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_lgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_int.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_ParaSails.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_pcg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_pilut.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ads.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ame.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_setup.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_solve.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_solveT.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cg_relax_wt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coarsen.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cgc_coarsen.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coarse_parms.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coordinates.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cycle.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_difconv.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_gsmg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_indepset.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_jacobi_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_multi_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace_27pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace_9pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_lr_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_nodal_systems.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rap.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rap_communication.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rotate_7pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_vardifconv.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax_more.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax_interface.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_scaled_matnorm.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_stats.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_strength.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_sv_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_sv_interp_ln.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c partial.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c pcg_par.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c block_tridiag.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ads.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ame.c Building libHYPRE_parcsr_ls.a ... ar -rcu libHYPRE_parcsr_ls.a amg_hybrid.o aux_interp.o F90_hypre_laplace.o F90_HYPRE_parcsr_amg.o F90_HYPRE_parcsr_bicgstab.o F90_HYPRE_parcsr_block.o F90_HYPRE_parcsr_cgnr.o F90_HYPRE_parcsr_Euclid.o F90_HYPRE_parcsr_gmres.o F90_HYPRE_parcsr_flexgmres.o F90_HYPRE_parcsr_lgmres.o F90_HYPRE_parcsr_hybrid.o F90_HYPRE_parcsr_int.o F90_HYPRE_parcsr_ParaSails.o F90_HYPRE_parcsr_pcg.o F90_HYPRE_parcsr_pilut.o F90_HYPRE_parcsr_schwarz.o F90_HYPRE_ams.o gen_redcs_mat.o HYPRE_parcsr_amg.o HYPRE_parcsr_bicgstab.o HYPRE_parcsr_block.o HYPRE_parcsr_cgnr.o HYPRE_parcsr_Euclid.o HYPRE_parcsr_gmres.o HYPRE_parcsr_flexgmres.o HYPRE_parcsr_lgmres.o HYPRE_parcsr_hybrid.o HYPRE_parcsr_int.o HYPRE_parcsr_ParaSails.o HYPRE_parcsr_pcg.o HYPRE_parcsr_pilut.o HYPRE_parcsr_schwarz.o HYPRE_ams.o HYPRE_ads.o HYPRE_ame.o par_amg.o par_amg_setup.o par_amg_solve.o par_amg_solveT.o par_cg_relax_wt.o par_coarsen.o par_cgc_coarsen.o par_coarse_parms.o par_coordinates.o par_cr.o par_cycle.o par_difconv.o par_gsmg.o par_indepset.o par_interp.o par_jacobi_interp.o par_multi_interp.o par_laplace_27pt.o par_laplace_9pt.o par_laplace.o par_lr_interp.o par_nodal_systems.o par_rap.o par_rap_communication.o par_rotate_7pt.o par_vardifconv.o par_relax.o par_relax_more.o par_relax_interface.o par_scaled_matnorm.o par_schwarz.o par_stats.o par_strength.o par_sv_interp.o par_sv_interp_ln.o partial.o pcg_par.o schwarz.o block_tridiag.o ams.o ads.o ame.o ranlib libHYPRE_parcsr_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' Making struct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c assumed_part.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_algebra.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_alloc.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_boundary.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_manager.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c communication_info.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c computation.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c grow.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c project.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_copy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_io.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matrix_mask.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_overlap_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_scale.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_vector.c Building libHYPRE_struct_mv.a ... ar -rcu libHYPRE_struct_mv.a assumed_part.o box_algebra.o box_alloc.o box_boundary.o box.o box_manager.o communication_info.o computation.o F90_HYPRE_struct_grid.o F90_HYPRE_struct_matrix.o F90_HYPRE_struct_stencil.o F90_HYPRE_struct_vector.o grow.o HYPRE_struct_grid.o HYPRE_struct_matrix.o HYPRE_struct_stencil.o HYPRE_struct_vector.o project.o struct_axpy.o struct_communication.o struct_copy.o struct_grid.o struct_innerprod.o struct_io.o struct_matrix.o struct_matrix_mask.o struct_matvec.o struct_overlap_innerprod.o struct_scale.o struct_stencil.o struct_vector.o ranlib libHYPRE_struct_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_struct_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' Making struct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c coarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c cyclic_reduction.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c general.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pcg_struct.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap5.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap7.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c point_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c red_black_constantcoef_gs.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c red_black_gs.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_residual.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_filter.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_solve.c Building libHYPRE_struct_ls.a ... ar -rcu libHYPRE_struct_ls.a coarsen.o cyclic_reduction.o F90_HYPRE_struct_bicgstab.o F90_HYPRE_struct_gmres.o F90_HYPRE_struct_hybrid.o F90_HYPRE_struct_int.o F90_HYPRE_struct_jacobi.o F90_HYPRE_struct_pcg.o F90_HYPRE_struct_pfmg.o F90_HYPRE_struct_smg.o F90_HYPRE_struct_sparse_msg.o general.o hybrid.o HYPRE_struct_bicgstab.o HYPRE_struct_hybrid.o HYPRE_struct_int.o HYPRE_struct_jacobi.o HYPRE_struct_pfmg.o HYPRE_struct_smg.o HYPRE_struct_sparse_msg.o HYPRE_struct_pcg.o HYPRE_struct_gmres.o HYPRE_struct_flexgmres.o HYPRE_struct_lgmres.o jacobi.o pcg_struct.o pfmg2_setup_rap.o pfmg3_setup_rap.o pfmg.o pfmg_relax.o pfmg_setup.o pfmg_setup_interp.o pfmg_setup_rap5.o pfmg_setup_rap7.o pfmg_setup_rap.o pfmg_solve.o point_relax.o red_black_constantcoef_gs.o red_black_gs.o semi.o semi_interp.o semi_restrict.o semi_setup_rap.o smg2_setup_rap.o smg3_setup_rap.o smg_axpy.o smg.o smg_relax.o smg_residual.o smg_setup.o smg_setup_interp.o smg_setup_rap.o smg_setup_restrict.o smg_solve.o sparse_msg2_setup_rap.o sparse_msg3_setup_rap.o sparse_msg.o sparse_msg_filter.o sparse_msg_interp.o sparse_msg_restrict.o sparse_msg_setup.o sparse_msg_setup_rap.o sparse_msg_solve.o ranlib libHYPRE_struct_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_struct_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' Making sstruct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_copy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_overlap_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_scale.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_vector.c Building libHYPRE_sstruct_mv.a ... ar -rcu libHYPRE_sstruct_mv.a F90_HYPRE_sstruct_graph.o F90_HYPRE_sstruct_grid.o F90_HYPRE_sstruct_matrix.o F90_HYPRE_sstruct_stencil.o F90_HYPRE_sstruct_vector.o HYPRE_sstruct_graph.o HYPRE_sstruct_grid.o HYPRE_sstruct_matrix.o HYPRE_sstruct_stencil.o HYPRE_sstruct_vector.o sstruct_axpy.o sstruct_copy.o sstruct_graph.o sstruct_grid.o sstruct_innerprod.o sstruct_matrix.o sstruct_matvec.o sstruct_overlap_innerprod.o sstruct_scale.o sstruct_stencil.o sstruct_vector.o ranlib libHYPRE_sstruct_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' Making sstruct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_InterFAC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_maxwell.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_split.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_InterFAC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_maxwell.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_split.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_fcoarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_zero_data.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_cf_coarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_cfstencil_box.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_CFInterfaceExtents.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_interp2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_restrict2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_setup2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_solve3.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_zero_cdata.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_zero_stencilcoef.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_bsearch.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c krylov.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c krylov_sstruct.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c eliminate_rowscols.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_grad.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_physbdy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_PNedelec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_PNedelec_bdy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_TV.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_TV_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_zeroBC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_MaxwellSolve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_MaxwellSolve2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c nd1_amge_interpolation.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c node_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_amr_intercommunication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_owninfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_recvinfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_sendinfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_sharedDOFComm.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_semi_restrict.c Building libHYPRE_sstruct_ls.a ... ar -rcu libHYPRE_sstruct_ls.a F90_HYPRE_sstruct_bicgstab.o F90_HYPRE_sstruct_gmres.o F90_HYPRE_sstruct_flexgmres.o F90_HYPRE_sstruct_lgmres.o F90_HYPRE_sstruct_InterFAC.o F90_HYPRE_sstruct_int.o F90_HYPRE_sstruct_maxwell.o F90_HYPRE_sstruct_pcg.o F90_HYPRE_sstruct_split.o F90_HYPRE_sstruct_sys_pfmg.o HYPRE_sstruct_bicgstab.o HYPRE_sstruct_gmres.o HYPRE_sstruct_flexgmres.o HYPRE_sstruct_lgmres.o HYPRE_sstruct_InterFAC.o HYPRE_sstruct_int.o HYPRE_sstruct_maxwell.o HYPRE_sstruct_pcg.o HYPRE_sstruct_split.o HYPRE_sstruct_sys_pfmg.o fac.o fac_amr_rap.o fac_amr_fcoarsen.o fac_amr_zero_data.o fac_cf_coarsen.o fac_cfstencil_box.o fac_CFInterfaceExtents.o fac_interp2.o fac_relax.o fac_restrict2.o fac_setup2.o fac_solve3.o fac_zero_cdata.o fac_zero_stencilcoef.o hypre_bsearch.o krylov.o krylov_sstruct.o eliminate_rowscols.o maxwell_grad.o maxwell_physbdy.o maxwell_PNedelec.o maxwell_PNedelec_bdy.o maxwell_semi_interp.o maxwell_TV.o maxwell_TV_setup.o maxwell_zeroBC.o hypre_MaxwellSolve.o hypre_MaxwellSolve2.o nd1_amge_interpolation.o node_relax.o sstruct_amr_intercommunication.o sstruct_owninfo.o sstruct_recvinfo.o sstruct_sendinfo.o sstruct_sharedDOFComm.o sys_pfmg.o sys_pfmg_relax.o sys_pfmg_setup.o sys_pfmg_setup_interp.o sys_pfmg_setup_rap.o sys_pfmg_solve.o sys_semi_interp.o sys_semi_restrict.o ranlib libHYPRE_sstruct_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' Making lib ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Building libHYPRE ... ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities/*.o ranlib libHYPRE.a cp -fR libHYPRE* /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/lib make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Installing hypre ... sh: /usr/bin/ranlib /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/lib*.a Executing: /usr/bin/ranlib /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/lib*.a sh: ********Output of running make on hypre follows ******* Dist-Cleaning utilities ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' rm -f *.o libHYPRE* f2c.h *blas.h *lapack.h rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' Dist-Cleaning multivector ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' Dist-Cleaning krylov ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' Dist-Cleaning seq_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' Dist-Cleaning parcsr_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' rm -f *.o libHYPRE* rm -f driver driver_matvec driver_matmul rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' Dist-Cleaning parcsr_block_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' rm -rf *.o libHYPRE_* rm -f driver driver_matvec driver_matmul make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' Dist-Cleaning distributed_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' Dist-Cleaning IJ_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' Dist-Cleaning matrix_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' rm -f *.o lib* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' Dist-Cleaning distributed_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Dist-Cleaning parcsr_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' Dist-Cleaning struct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' Dist-Cleaning struct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' Dist-Cleaning sstruct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' Dist-Cleaning sstruct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' Dist-Cleaning lib ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Dist-Cleaning docs ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/docs' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/docs' Dist-Cleaning test ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/test' rm -f *.o rm -rf pchdir tca.map *inslog* rm -f ij ij_mv new_ij sstruct sstruct_fac struct maxwell_unscaled ams_driver rm -f ex1_for ex3_for ex5_for ex6_for ex7_for rm -f f77_ij f77_ij_mv f77_struct rm -f struct_b sstruct_b ij_b rm -f rm -f f77_ij_b f77_struct_b rm -f fei cxx_ij cxx_sstruct cxx_struct cxx_* rm -f TEST_examples/*.out* rm -f TEST_examples/*.err* rm -f TEST_fac/*.out* rm -f TEST_fac/*.err* rm -f TEST_ij/*.out* rm -f TEST_ij/*.err* rm -f TEST_ij/*.txt* rm -f TEST_ij/vectors.* rm -f TEST_sstruct/*.out* rm -f TEST_sstruct/*.err* rm -f TEST_struct/*.out* rm -f TEST_struct/*.err* rm -f ex1 ex2 ex3 ex4 ex5 ex5b ex5b77 ex6 ex7 ex8 ex9 make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/test' Dist-Cleaning seq_ls/pamg ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_ls/pamg' rm -f *.o lib* rm -f driver make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_ls/pamg' rm -rf tca.map pchdir *inslog* rm -rf ./config/Makefile.config rm -rf ./TAGS rm -rf ./autom4te.cache rm -rf ./config.log rm -rf ./config.status rm -rf ./HYPRE_config.h checking build system type... powerpc64-unknown-linux-gnu checking host system type... powerpc64-unknown-linux-gnu checking whether make sets $(MAKE)... yes checking for ranlib... ranlib checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... no checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... no checking whether mpicxx -qrtti=dyna -O -+ accepts -g... yes checking whether we are using the GNU Fortran 77 compiler... no checking whether mpif90 -O accepts -g... yes checking how to get verbose linking output from mpif90 -O ... -v checking for Fortran 77 libraries of mpif90 -O ... -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlf90_r -lxlopt -lxlomp_ser -lxl -lxlfmath -ldl -lm -lnss_files -lnss_dns -lresolv checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, no underscore, no extra underscore checking for MPI_Init... yes checking for mpi.h... yes checking for MPI_Comm_f2c... no checking for cabs in -lm... yes checking the hostname... vestalac1 checking the architecture... linux-rhel_6-ppc64 configure: creating ./config.status config.status: creating config/Makefile.config config.status: creating HYPRE_config.h Making utilities ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c amg_linklist.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c binsearch.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c exchange_data.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c fortran_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_ap.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_printf.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_memory.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_qsort.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c memory_dmalloc.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c mpistubs.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c qsplit.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c random.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c threading.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c thread_mpistubs.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c timer.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c timing.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c umalloc_local.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_mpi_comm_f2c.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c hypre_error.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I. -I/soft/compilers/wrappers/xl/include -DHYPRE_TIMING -c F90_HYPRE_error.c Building libHYPRE_utilities.a ... ar -rcu libHYPRE_utilities.a *.o ranlib libHYPRE_utilities.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_utilities.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./fortran*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities' Making multivector ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' mpicc -O -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c multivector.c mpicc -O -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c temp_multivector.c Building libHYPRE_multivector.a ... ar -rcu libHYPRE_multivector.a multivector.o temp_multivector.o ranlib libHYPRE_multivector.a cp -fR *.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector' Making krylov ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c cgnr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_cgnr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_lobpcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../multivector -I./../utilities -I/soft/compilers/wrappers/xl/include -c lobpcg.c Building libHYPRE_krylov.a ... ar -rcu libHYPRE_krylov.a bicgstab.o cgnr.o gmres.o flexgmres.o lgmres.o HYPRE_bicgstab.o HYPRE_cgnr.o HYPRE_gmres.o HYPRE_lgmres.o HYPRE_flexgmres.o HYPRE_pcg.o pcg.o HYPRE_lobpcg.o lobpcg.o ranlib libHYPRE_krylov.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./krylov.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./lobpcg.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov' Making seq_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c csr_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c genpart.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_mapped_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_multiblock_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c mapped_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c multiblock_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c vector.c Building libHYPRE_seq_mv.a ... ar -rcu libHYPRE_seq_mv.a csr_matop.o csr_matrix.o csr_matvec.o genpart.o HYPRE_csr_matrix.o HYPRE_mapped_matrix.o HYPRE_multiblock_matrix.o HYPRE_vector.o mapped_matrix.o multiblock_matrix.o vector.o ranlib libHYPRE_seq_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./seq_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv' Making parcsr_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c communicationT.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c F90_par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c new_commpkg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c numbers.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_aat.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_assumed_part.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_bool_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_bool_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matop.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matop_marked.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_csr_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c par_make_system.c Building libHYPRE_parcsr_mv.a ... ar -rcu libHYPRE_parcsr_mv.a communicationT.o F90_HYPRE_parcsr_matrix.o F90_HYPRE_parcsr_vector.o F90_parcsr_matrix.o F90_par_vector.o HYPRE_parcsr_matrix.o HYPRE_parcsr_vector.o new_commpkg.o numbers.o par_csr_aat.o par_csr_assumed_part.o par_csr_bool_matop.o par_csr_bool_matrix.o par_csr_communication.o par_csr_matop.o par_csr_matrix.o par_csr_matop_marked.o par_csr_matvec.o par_vector.o par_make_system.o ranlib libHYPRE_parcsr_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv' Making parcsr_block_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c csr_block_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c csr_block_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_comm.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_rap_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_csr_block_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -I/soft/compilers/wrappers/xl/include -c par_block_nodal_systems.c Building libHYPRE_parcsr_block_mv.a ... ar -rcu libHYPRE_parcsr_block_mv.a csr_block_matrix.o csr_block_matvec.o par_csr_block_matrix.o par_csr_block_matvec.o par_csr_block_comm.o par_csr_block_rap.o par_csr_block_rap_communication.o par_csr_block_interp.o par_csr_block_relax.o par_block_nodal_systems.o ranlib libHYPRE_parcsr_block_mv.a cp -fR ./par_csr_block_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./csr_block_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv' Making distributed_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_distributed_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_ISIS.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_PETSc.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -I/soft/compilers/wrappers/xl/include -c distributed_matrix_parcsr.c Building libHYPRE_DistributedMatrix.a ... ar -rcu libHYPRE_DistributedMatrix.a distributed_matrix.o HYPRE_distributed_matrix.o distributed_matrix_ISIS.o distributed_matrix_PETSc.o distributed_matrix_parcsr.o ranlib libHYPRE_DistributedMatrix.a cp -fR ./distributed_matrix.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix' Making IJ_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c aux_parcsr_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c aux_par_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJMatrix_parcsr.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJVector.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c IJVector_parcsr.c Building libHYPRE_IJ_mv.a ... ar -rcu libHYPRE_IJ_mv.a aux_parcsr_matrix.o aux_par_vector.o F90_HYPRE_IJMatrix.o F90_HYPRE_IJVector.o F90_IJMatrix.o HYPRE_IJMatrix.o HYPRE_IJVector.o IJMatrix.o IJMatrix_parcsr.o IJVector.o IJVector_parcsr.o ranlib libHYPRE_IJ_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_IJ_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv' Making matrix_matrix ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ConvertParCSRMatrixToDistributedMatrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ConvertPETScMatrixToDistributedMatrix.c Building libHYPRE_MatrixMatrix.a ... ar -rcu libHYPRE_MatrixMatrix.a HYPRE_ConvertParCSRMatrixToDistributedMatrix.o HYPRE_ConvertPETScMatrixToDistributedMatrix.o ranlib libHYPRE_MatrixMatrix.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix' Making distributed_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Making pilut ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c comm.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c debug.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c distributed_qsort.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c distributed_qsort_si.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c HYPRE_DistributedMatrixPilutSolver.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c parilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c parutil.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c pblas1.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c serilut.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c trifactor.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c util.c Building libHYPRE_DistributedMatrixPilutSolver.a ... ar -rcu libHYPRE_DistributedMatrixPilutSolver.a comm.o debug.o distributed_qsort.o distributed_qsort_si.o HYPRE_DistributedMatrixPilutSolver.o ilut.o parilut.o parutil.o pblas1.o serilut.o trifactor.o util.o ranlib libHYPRE_DistributedMatrixPilutSolver.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut' Making ParaSails ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ConjGrad.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c DiagScale.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c FGmres.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Hash.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c hypre_ParaSails.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c LoadBal.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Matrix.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Mem.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c Numbering.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c OrderStat.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c ParaSails.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c PrunedRows.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c RowPatt.c mpicc -O -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../distributed_matrix -I/soft/compilers/wrappers/xl/include -c StoredRows.c Building libHYPRE_ParaSails.a ... ar -rcu libHYPRE_ParaSails.a ConjGrad.o DiagScale.o FGmres.o Hash.o hypre_ParaSails.o LoadBal.o Matrix.o Mem.o Numbering.o OrderStat.o ParaSails.o PrunedRows.o RowPatt.o StoredRows.o ranlib libHYPRE_ParaSails.a make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails' Making Euclid ... make[2]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c blas_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Euclid_apply.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Euclid_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ExternalRows_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Factor_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c getRow_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c globalObjects.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Hash_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Hash_i_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_mpi_bj.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_mpi_pilu.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c ilu_seq.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c io_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c krylov_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Mat_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c mat_dh_private.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c MatGenFD.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Mem_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Numbering_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Parser_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c shellSort_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c sig_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SortedList_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SortedSet_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c SubdomainGraph_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c TimeLog_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Timer_dh.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -I/soft/compilers/wrappers/xl/include -c Vec_dh.c Building libHYPRE_Euclid.a ... ar -rcu libHYPRE_Euclid.a blas_dh.o Euclid_apply.o Euclid_dh.o ExternalRows_dh.o Factor_dh.o getRow_dh.o globalObjects.o Hash_dh.o Hash_i_dh.o ilu_mpi_bj.o ilu_mpi_pilu.o ilu_seq.o io_dh.o krylov_dh.o Mat_dh.o mat_dh_private.o MatGenFD.o Mem_dh.o Numbering_dh.o Parser_dh.o shellSort_dh.o sig_dh.o SortedList_dh.o SortedSet_dh.o SubdomainGraph_dh.o TimeLog_dh.o Timer_dh.o Vec_dh.o ranlib libHYPRE_Euclid.a make[2]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid' make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls' Making parcsr_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c amg_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c aux_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_hypre_laplace.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_bicgstab.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_block.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_cgnr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_Euclid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_gmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_flexgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_lgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_int.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_ParaSails.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_pcg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_pilut.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_parcsr_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c gen_redcs_mat.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_bicgstab.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_block.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_cgnr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_Euclid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_gmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_flexgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_lgmres.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_hybrid.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_int.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_ParaSails.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_pcg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_pilut.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_parcsr_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ads.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_ame.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_setup.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_solve.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_amg_solveT.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cg_relax_wt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coarsen.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cgc_coarsen.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coarse_parms.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_coordinates.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cr.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_cycle.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_difconv.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_gsmg.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_indepset.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_jacobi_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_multi_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace_27pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace_9pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_laplace.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_lr_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_nodal_systems.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rap.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rap_communication.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_rotate_7pt.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_vardifconv.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax_more.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_relax_interface.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_scaled_matnorm.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_stats.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_strength.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_sv_interp.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c par_sv_interp_ln.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c partial.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c pcg_par.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c schwarz.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c block_tridiag.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ams.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ads.c mpicc -O -DHAVE_CONFIG_H -DMPI_MODE -DMPI_TIMING -DUSING_MPI -DHYPRE_GET_ROW -DHYPRE_MODE -DOPTIMIZED_DH -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -I/soft/compilers/wrappers/xl/include -c ame.c Building libHYPRE_parcsr_ls.a ... ar -rcu libHYPRE_parcsr_ls.a amg_hybrid.o aux_interp.o F90_hypre_laplace.o F90_HYPRE_parcsr_amg.o F90_HYPRE_parcsr_bicgstab.o F90_HYPRE_parcsr_block.o F90_HYPRE_parcsr_cgnr.o F90_HYPRE_parcsr_Euclid.o F90_HYPRE_parcsr_gmres.o F90_HYPRE_parcsr_flexgmres.o F90_HYPRE_parcsr_lgmres.o F90_HYPRE_parcsr_hybrid.o F90_HYPRE_parcsr_int.o F90_HYPRE_parcsr_ParaSails.o F90_HYPRE_parcsr_pcg.o F90_HYPRE_parcsr_pilut.o F90_HYPRE_parcsr_schwarz.o F90_HYPRE_ams.o gen_redcs_mat.o HYPRE_parcsr_amg.o HYPRE_parcsr_bicgstab.o HYPRE_parcsr_block.o HYPRE_parcsr_cgnr.o HYPRE_parcsr_Euclid.o HYPRE_parcsr_gmres.o HYPRE_parcsr_flexgmres.o HYPRE_parcsr_lgmres.o HYPRE_parcsr_hybrid.o HYPRE_parcsr_int.o HYPRE_parcsr_ParaSails.o HYPRE_parcsr_pcg.o HYPRE_parcsr_pilut.o HYPRE_parcsr_schwarz.o HYPRE_ams.o HYPRE_ads.o HYPRE_ame.o par_amg.o par_amg_setup.o par_amg_solve.o par_amg_solveT.o par_cg_relax_wt.o par_coarsen.o par_cgc_coarsen.o par_coarse_parms.o par_coordinates.o par_cr.o par_cycle.o par_difconv.o par_gsmg.o par_indepset.o par_interp.o par_jacobi_interp.o par_multi_interp.o par_laplace_27pt.o par_laplace_9pt.o par_laplace.o par_lr_interp.o par_nodal_systems.o par_rap.o par_rap_communication.o par_rotate_7pt.o par_vardifconv.o par_relax.o par_relax_more.o par_relax_interface.o par_scaled_matnorm.o par_schwarz.o par_stats.o par_strength.o par_sv_interp.o par_sv_interp_ln.o partial.o pcg_par.o schwarz.o block_tridiag.o ams.o ads.o ame.o ranlib libHYPRE_parcsr_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls' Making struct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c assumed_part.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_algebra.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_alloc.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_boundary.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c box_manager.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c communication_info.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c computation.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c grow.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c project.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_communication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_copy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_io.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matrix_mask.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_overlap_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_scale.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I/soft/compilers/wrappers/xl/include -c struct_vector.c Building libHYPRE_struct_mv.a ... ar -rcu libHYPRE_struct_mv.a assumed_part.o box_algebra.o box_alloc.o box_boundary.o box.o box_manager.o communication_info.o computation.o F90_HYPRE_struct_grid.o F90_HYPRE_struct_matrix.o F90_HYPRE_struct_stencil.o F90_HYPRE_struct_vector.o grow.o HYPRE_struct_grid.o HYPRE_struct_matrix.o HYPRE_struct_stencil.o HYPRE_struct_vector.o project.o struct_axpy.o struct_communication.o struct_copy.o struct_grid.o struct_innerprod.o struct_io.o struct_matrix.o struct_matrix_mask.o struct_matvec.o struct_overlap_innerprod.o struct_scale.o struct_stencil.o struct_vector.o ranlib libHYPRE_struct_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_struct_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv' Making struct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c coarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c cyclic_reduction.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_struct_sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c general.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_hybrid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_struct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c jacobi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pcg_struct.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap5.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap7.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c pfmg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c point_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c red_black_constantcoef_gs.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c red_black_gs.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c semi_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_residual.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_setup_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c smg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg2_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg3_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_filter.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_restrict.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I/soft/compilers/wrappers/xl/include -c sparse_msg_solve.c Building libHYPRE_struct_ls.a ... ar -rcu libHYPRE_struct_ls.a coarsen.o cyclic_reduction.o F90_HYPRE_struct_bicgstab.o F90_HYPRE_struct_gmres.o F90_HYPRE_struct_hybrid.o F90_HYPRE_struct_int.o F90_HYPRE_struct_jacobi.o F90_HYPRE_struct_pcg.o F90_HYPRE_struct_pfmg.o F90_HYPRE_struct_smg.o F90_HYPRE_struct_sparse_msg.o general.o hybrid.o HYPRE_struct_bicgstab.o HYPRE_struct_hybrid.o HYPRE_struct_int.o HYPRE_struct_jacobi.o HYPRE_struct_pfmg.o HYPRE_struct_smg.o HYPRE_struct_sparse_msg.o HYPRE_struct_pcg.o HYPRE_struct_gmres.o HYPRE_struct_flexgmres.o HYPRE_struct_lgmres.o jacobi.o pcg_struct.o pfmg2_setup_rap.o pfmg3_setup_rap.o pfmg.o pfmg_relax.o pfmg_setup.o pfmg_setup_interp.o pfmg_setup_rap5.o pfmg_setup_rap7.o pfmg_setup_rap.o pfmg_solve.o point_relax.o red_black_constantcoef_gs.o red_black_gs.o semi.o semi_interp.o semi_restrict.o semi_setup_rap.o smg2_setup_rap.o smg3_setup_rap.o smg_axpy.o smg.o smg_relax.o smg_residual.o smg_setup.o smg_setup_interp.o smg_setup_rap.o smg_setup_restrict.o smg_solve.o sparse_msg2_setup_rap.o sparse_msg3_setup_rap.o sparse_msg.o sparse_msg_filter.o sparse_msg_interp.o sparse_msg_restrict.o sparse_msg_setup.o sparse_msg_setup_rap.o sparse_msg_solve.o ranlib libHYPRE_struct_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_struct_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls' Making sstruct_mv ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_vector.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_axpy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_copy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_graph.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_grid.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_matrix.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_matvec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_overlap_innerprod.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_scale.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_stencil.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I/soft/compilers/wrappers/xl/include -c sstruct_vector.c Building libHYPRE_sstruct_mv.a ... ar -rcu libHYPRE_sstruct_mv.a F90_HYPRE_sstruct_graph.o F90_HYPRE_sstruct_grid.o F90_HYPRE_sstruct_matrix.o F90_HYPRE_sstruct_stencil.o F90_HYPRE_sstruct_vector.o HYPRE_sstruct_graph.o HYPRE_sstruct_grid.o HYPRE_sstruct_matrix.o HYPRE_sstruct_stencil.o HYPRE_sstruct_vector.o sstruct_axpy.o sstruct_copy.o sstruct_graph.o sstruct_grid.o sstruct_innerprod.o sstruct_matrix.o sstruct_matvec.o sstruct_overlap_innerprod.o sstruct_scale.o sstruct_stencil.o sstruct_vector.o ranlib libHYPRE_sstruct_mv.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv' Making sstruct_ls ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_InterFAC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_maxwell.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_split.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c F90_HYPRE_sstruct_sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_bicgstab.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_gmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_flexgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_lgmres.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_InterFAC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_int.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_maxwell.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_pcg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_split.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c HYPRE_sstruct_sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_fcoarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_amr_zero_data.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_cf_coarsen.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_cfstencil_box.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_CFInterfaceExtents.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_interp2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_restrict2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_setup2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_solve3.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_zero_cdata.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c fac_zero_stencilcoef.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_bsearch.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c krylov.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c krylov_sstruct.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c eliminate_rowscols.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_grad.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_physbdy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_PNedelec.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_PNedelec_bdy.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_TV.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_TV_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c maxwell_zeroBC.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_MaxwellSolve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c hypre_MaxwellSolve2.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c nd1_amge_interpolation.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c node_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_amr_intercommunication.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_owninfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_recvinfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_sendinfo.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sstruct_sharedDOFComm.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_relax.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_setup_rap.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_pfmg_solve.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_semi_interp.c mpicc -O -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -I/soft/compilers/wrappers/xl/include -c sys_semi_restrict.c Building libHYPRE_sstruct_ls.a ... ar -rcu libHYPRE_sstruct_ls.a F90_HYPRE_sstruct_bicgstab.o F90_HYPRE_sstruct_gmres.o F90_HYPRE_sstruct_flexgmres.o F90_HYPRE_sstruct_lgmres.o F90_HYPRE_sstruct_InterFAC.o F90_HYPRE_sstruct_int.o F90_HYPRE_sstruct_maxwell.o F90_HYPRE_sstruct_pcg.o F90_HYPRE_sstruct_split.o F90_HYPRE_sstruct_sys_pfmg.o HYPRE_sstruct_bicgstab.o HYPRE_sstruct_gmres.o HYPRE_sstruct_flexgmres.o HYPRE_sstruct_lgmres.o HYPRE_sstruct_InterFAC.o HYPRE_sstruct_int.o HYPRE_sstruct_maxwell.o HYPRE_sstruct_pcg.o HYPRE_sstruct_split.o HYPRE_sstruct_sys_pfmg.o fac.o fac_amr_rap.o fac_amr_fcoarsen.o fac_amr_zero_data.o fac_cf_coarsen.o fac_cfstencil_box.o fac_CFInterfaceExtents.o fac_interp2.o fac_relax.o fac_restrict2.o fac_setup2.o fac_solve3.o fac_zero_cdata.o fac_zero_stencilcoef.o hypre_bsearch.o krylov.o krylov_sstruct.o eliminate_rowscols.o maxwell_grad.o maxwell_physbdy.o maxwell_PNedelec.o maxwell_PNedelec_bdy.o maxwell_semi_interp.o maxwell_TV.o maxwell_TV_setup.o maxwell_zeroBC.o hypre_MaxwellSolve.o hypre_MaxwellSolve2.o nd1_amge_interpolation.o node_relax.o sstruct_amr_intercommunication.o sstruct_owninfo.o sstruct_recvinfo.o sstruct_sendinfo.o sstruct_sharedDOFComm.o sys_pfmg.o sys_pfmg_relax.o sys_pfmg_setup.o sys_pfmg_setup_interp.o sys_pfmg_setup_rap.o sys_pfmg_solve.o sys_semi_interp.o sys_semi_restrict.o ranlib libHYPRE_sstruct_ls.a cp -fR ./HYPRE_*.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/include make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls' Making lib ... make[1]: Entering directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Building libHYPRE ... ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/IJ_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/Euclid/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/ParaSails/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_ls/pilut/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/distributed_matrix/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/krylov/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/matrix_matrix/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/multivector/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/parcsr_block_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/seq_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/sstruct_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_ls/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/struct_mv/*.o ar -rcu libHYPRE.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/utilities/*.o ranlib libHYPRE.a cp -fR libHYPRE* /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/hypre/lib make[1]: Leaving directory `/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/src/lib' Installing hypre ... 1500-030: (I) INFORMATION: hypre_ParCSRBlockMatrixRAP: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_AMGHybridSolve: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGSetup: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGBuildMultipass: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGBuildStdInterp: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGRelax: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGSetupStats: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMG_LNExpandInterp: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_BoomerAMGBuildPartialStdInterp: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_AMSSetup: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_StructAssumedPartitionCreate: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_PFMG3BuildRAPSym_onebox_FSS27_CC0: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_SparseMSGSetup: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_AMR_FCoarsen: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_FacSetup2: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_Maxwell_PNedelec: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_Maxwell_PTopology: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. 1500-030: (I) INFORMATION: hypre_MaxwellTV_Setup: Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192. ********End of Output of running make on hypre ******* sh: cp -f /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/hypre /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/hypre Executing: cp -f /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/hypre-2.8.0b/hypre /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/hypre sh: Checking for library in Download HYPRE: ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libHYPRE.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichcxx-xl', '-libmc++'] Contents: ['include', 'lib', 'bin', 'conf'] ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function HYPRE_IJMatrixCreate in library ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libHYPRE.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichcxx-xl', '-libmc++'] ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a', '/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); int main() { HYPRE_IJMatrixCreate() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBHYPRE" to "1" Defined "HAVE_LIBMPICHCXX_XL" to "1" Defined "HAVE_LIBIBMC__" to "1" Popping language C Checking for headers Download HYPRE: ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Found header files ['HYPRE.h'] in ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.hypre(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:487) TESTING: checkSharedLibrary from PETSc.packages.hypre(config/BuildSystem/config/package.py:487) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.blacs(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.blacs(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SCALAPACK(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.SCALAPACK(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hwloc(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.hwloc(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sprng(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.sprng(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Numpy(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Numpy(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Lgrind ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pARMS(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.pARMS(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PLAPACK(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.PLAPACK(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default sh: uname -s Executing: uname -s sh: Linux sh: uname -s Executing: uname -s sh: Linux Checking for function dormqr in library ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a', '/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dormqr(); int main() { dormqr() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBLAPACK" to "1" Defined "HAVE_LIBBLAS" to "1" Defined "HAVE_LIBMPICHF90_XL" to "1" Defined "HAVE_LIBXLF90_R" to "1" Defined "HAVE_LIBXLOMP_SER" to "1" Defined "HAVE_LIBXLFMATH" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found dormqr() in Lapack library as needed by SPAI Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.spai(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:433) TESTING: configureLibrary from PETSc.packages.spai(config/BuildSystem/config/package.py:433) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional spai Looking for SPAI in directory starting with spai Found a copy of SPAI in spai_3.0-mar-06 Pushing language C Popping language C Have to rebuild spai, /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/Makefile.in != /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/spai =============================================================================== Configuring and compiling Spai; this may take several minutes =============================================================================== sh: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/lib && make clean && make && mv -f libspai.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a Executing: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/lib && make clean && make && mv -f libspai.a /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a sh: cleaning ... rm -f core* rm -f '#'* rm -f *~ rm -f debug.o basics.o spai.o spai_sub.o qr.o load_balance.o com_server.o hash_table.o index_set.o matrix.o vector.o blocks.o bicgstab.o read_mm_matrix.o mmio.o variable_blocks.o timing.o mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c debug.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c basics.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c spai.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c spai_sub.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c qr.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c load_balance.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c com_server.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c hash_table.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c index_set.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c matrix.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c vector.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c blocks.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c bicgstab.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c read_mm_matrix.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c mmio.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c variable_blocks.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c timing.c Building library /usr/bin/ar cr libspai.a debug.o basics.o spai.o spai_sub.o qr.o load_balance.o com_server.o hash_table.o index_set.o matrix.o vector.o blocks.o bicgstab.o read_mm_matrix.o mmio.o variable_blocks.o timing.o sh: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/lib && cp -f *.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include Executing: cd /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/lib && cp -f *.h /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include sh: sh: /usr/bin/ranlib /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a Executing: /usr/bin/ranlib /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a sh: ********Output of running make on spai follows ******* cleaning ... rm -f core* rm -f '#'* rm -f *~ rm -f debug.o basics.o spai.o spai_sub.o qr.o load_balance.o com_server.o hash_table.o index_set.o matrix.o vector.o blocks.o bicgstab.o read_mm_matrix.o mmio.o variable_blocks.o timing.o mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c debug.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c basics.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c spai.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c spai_sub.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c qr.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c load_balance.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c com_server.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c hash_table.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c index_set.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c matrix.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c vector.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c blocks.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c bicgstab.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c read_mm_matrix.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c mmio.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c variable_blocks.c mpicc -DMPI -DSP2 -O -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include -c timing.c Building library /usr/bin/ar cr libspai.a debug.o basics.o spai.o spai_sub.o qr.o load_balance.o com_server.o hash_table.o index_set.o matrix.o vector.o blocks.o bicgstab.o read_mm_matrix.o mmio.o variable_blocks.o timing.o ********End of Output of running make on spai ******* sh: cp -f /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/Makefile.in /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/spai Executing: cp -f /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/externalpackages/spai_3.0-mar-06/Makefile.in /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/conf/spai sh: Checking for library in Download SPAI: ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a'] Contents: ['include', 'lib', 'bin', 'conf'] ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function bspai in library ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib/libspai.a'] ['/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a', '/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bspai(); int main() { bspai() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_LIBSPAI" to "1" Popping language C Checking for headers Download SPAI: ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['spai.h'] in ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk -I/bgsys/drivers/V1R2M1/ppc64/comm/include /tmp/petsc-lj0zFz/config.headers/conftest.c sh: #line 211 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include/stddef.h" typedef unsigned long size_t; #line 323 typedef int wchar_t; #line 67 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 68 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); #line 98 typedef struct { int quot; int rem; } div_t; #line 106 typedef struct { long int quot; long int rem; } ldiv_t; #line 118 __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; #line 140 extern size_t __ctype_get_mb_cur_max (void) ; #line 145 extern double atof (const char *__nptr) __attribute__ ((__pure__)) ; extern int atoi (const char *__nptr) __attribute__ ((__pure__)) ; extern long int atol (const char *__nptr) __attribute__ ((__pure__)) ; #line 158 __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__pure__)) ; #line 165 extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) ; #line 173 extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) ; extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) ; #line 184 extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 195 __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 209 __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) ; #line 311 extern char *l64a (long int __n) ; #line 314 extern long int a64l (const char *__s) __attribute__ ((__pure__)) ; #line 31 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; #line 37 typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; #line 53 typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 134 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; #line 158 typedef int __clockid_t; #line 161 typedef void * __timer_t; #line 164 typedef long int __blksize_t; #line 169 typedef long int __blkcnt_t; typedef long int __blkcnt64_t; #line 173 typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; #line 177 typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; #line 184 typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; #line 189 typedef long int __intptr_t; #line 192 typedef unsigned int __socklen_t; #line 34 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; #line 45 typedef __loff_t loff_t; #line 49 typedef __ino_t ino_t; #line 61 typedef __dev_t dev_t; #line 66 typedef __gid_t gid_t; #line 71 typedef __mode_t mode_t; #line 76 typedef __nlink_t nlink_t; #line 81 typedef __uid_t uid_t; #line 87 typedef __off_t off_t; #line 99 typedef __pid_t pid_t; #line 105 typedef __id_t id_t; #line 110 typedef __ssize_t ssize_t; #line 116 typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; #line 123 typedef __key_t key_t; #line 60 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" typedef __clock_t clock_t; #line 76 typedef __time_t time_t; #line 92 typedef __clockid_t clockid_t; #line 104 typedef __timer_t timer_t; #line 151 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 195 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); #line 201 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); #line 24 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sigset.h" typedef int __sig_atomic_t; #line 29 typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 38 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __sigset_t sigset_t; #line 120 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 75 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 49 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/select.h" typedef __suseconds_t suseconds_t; #line 55 typedef long int __fd_mask; #line 67 typedef struct { #line 75 __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; #line 78 } fd_set; #line 85 typedef __fd_mask fd_mask; #line 109 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); #line 121 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); #line 30 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/sysmacros.h" __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) ; __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 229 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/sys/types.h" typedef __blksize_t blksize_t; #line 236 typedef __blkcnt_t blkcnt_t; #line 240 typedef __fsblkcnt_t fsblkcnt_t; #line 244 typedef __fsfilcnt_t fsfilcnt_t; #line 51 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; #line 54 typedef union { char __size[56]; long int __align__workaround; } pthread_attr_t; #line 62 typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 77 typedef union { struct __pthread_mutex_s { volatile int __lock; volatile unsigned int __count; volatile int __owner; unsigned int __nusers; #line 89 int __kind; int __spins; __pthread_list_t __list; #line 102 } __data; char __size[40]; long int __align__workaround; } pthread_mutex_t; typedef union { char __size[4]; int __align__workaround; } pthread_mutexattr_t; #line 116 typedef union { struct { volatile int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align__workaround; } pthread_cond_t; typedef union { char __size[4]; int __align__workaround; } pthread_condattr_t; #line 141 typedef unsigned int pthread_key_t; #line 145 typedef int pthread_once_t; #line 151 typedef union { struct { volatile int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; #line 168 unsigned int __flags; } __data; #line 188 char __size[56]; long int __align__workaround; } pthread_rwlock_t; typedef union { char __size[8]; long int __align__workaround; } pthread_rwlockattr_t; #line 202 typedef volatile int pthread_spinlock_t; #line 207 typedef union { char __size[32]; long int __align__workaround; } pthread_barrier_t; typedef union { char __size[4]; int __align__workaround; } pthread_barrierattr_t; #line 327 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern long int random (void) ; #line 330 extern void srandom (unsigned int __seed) ; #line 336 extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; #line 341 extern char *setstate (char *__statebuf) ; #line 349 struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) ; extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) ; #line 380 extern int rand (void) ; extern void srand (unsigned int __seed) ; #line 387 extern int rand_r (unsigned int *__seed) ; #line 395 extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; #line 399 extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; #line 404 extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; #line 409 extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; #line 418 struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; #line 428 extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) ; #line 435 extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 444 extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) ; #line 453 extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; #line 471 extern void *malloc (size_t __size) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__malloc__)) ; #line 485 extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) ; #line 493 extern void cfree (void *__ptr) ; #line 33 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/alloca.h" extern void *alloca (size_t __size) ; #line 503 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdlib.h" extern void *valloc (size_t __size) __attribute__ ((__malloc__)) ; #line 508 extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; #line 514 extern void abort (void) __attribute__ ((__noreturn__)); #line 518 extern int atexit (void (*__func) (void)) ; #line 536 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; #line 544 extern void exit (int __status) __attribute__ ((__noreturn__)); #line 560 extern void _Exit (int __status) __attribute__ ((__noreturn__)); #line 567 extern char *getenv (const char *__name) ; #line 572 extern char *__secure_getenv (const char *__name) ; #line 579 extern int putenv (char *__string) ; #line 585 extern int setenv (const char *__name, const char *__value, int __replace) ; #line 589 extern int unsetenv (const char *__name) ; #line 596 extern int clearenv (void) ; #line 606 extern char *mktemp (char *__template) ; #line 620 extern int mkstemp (char *__template) ; #line 642 extern int mkstemps (char *__template, int __suffixlen) ; #line 663 extern char *mkdtemp (char *__template) ; #line 717 extern int system (const char *__command) ; #line 734 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) ; #line 742 typedef int (*__compar_fn_t) (const void *, const void *); #line 755 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 761 extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; #line 771 extern int abs (int __x) __attribute__ ((const)) ; extern long int labs (long int __x) __attribute__ ((const)) ; #line 776 __extension__ extern long long int llabs (long long int __x) __attribute__ ((const)) ; #line 785 extern div_t div (int __numer, int __denom) __attribute__ ((const)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((const)) ; #line 793 __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((const)) ; #line 808 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 814 extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; #line 820 extern char *gcvt (double __value, int __ndigit, char *__buf) ; #line 826 extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; #line 838 extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) ; #line 860 extern int mblen (const char *__s, size_t __n) ; #line 863 extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) ; #line 867 extern int wctomb (char *__s, wchar_t __wchar) ; #line 871 extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) ; extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) ; #line 885 extern int rpmatch (const char *__response) ; #line 896 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) ; #line 948 extern int getloadavg (double __loadavg[], int __nelem) ; #line 45 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" struct _IO_FILE; #line 49 typedef struct _IO_FILE FILE; #line 65 typedef struct _IO_FILE __FILE; #line 83 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/wchar.h" typedef struct { int __count; union { unsigned int __wch; #line 93 char __wchb[4]; } __value; } __mbstate_t; #line 22 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 53 typedef int _G_int16_t __attribute__ ((__mode__ (__HI__))); typedef int _G_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int _G_uint16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int _G_uint32_t __attribute__ ((__mode__ (__SI__))); #line 70 "/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/include/stdarg.h" typedef __builtin_va_list __gnuc_va_list; #line 79 typedef __builtin_va_list va_list; #line 170 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 typedef void _IO_lock_t; #line 186 struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; #line 192 int _pos; #line 203 }; #line 206 enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 271 struct _IO_FILE { int _flags; #line 277 char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; #line 298 int _flags2; __off_t _old_offset; #line 304 unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; #line 310 _IO_lock_t *_lock; #line 319 __off64_t _offset; #line 328 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; #line 341 typedef struct _IO_FILE _IO_FILE; #line 344 struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 364 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); #line 372 typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); #line 381 typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); #line 384 typedef int __io_close_fn (void *__cookie); #line 416 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 460 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); #line 471 extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 490 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 111 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" typedef _G_fpos_t fpos_t; #line 165 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; #line 175 extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; #line 182 extern int renameat (int __oldfd, const char *__old, int __newfd, const char *__new) ; #line 192 extern FILE *tmpfile (void) ; #line 206 extern char *tmpnam (char *__s) ; #line 212 extern char *tmpnam_r (char *__s) ; #line 224 extern char *tempnam (const char *__dir, const char *__pfx) __attribute__ ((__malloc__)) ; #line 234 extern int fclose (FILE *__stream); #line 239 extern int fflush (FILE *__stream); #line 249 extern int fflush_unlocked (FILE *__stream); #line 269 extern FILE *fopen (const char *__restrict __filename, const char *__restrict __modes) ; #line 275 extern FILE *freopen (const char *__restrict __filename, const char *__restrict __modes, FILE *__restrict __stream) ; #line 303 extern FILE *fdopen (int __fd, const char *__modes) ; #line 316 extern FILE *fmemopen (void *__s, size_t __len, const char *__modes) ; #line 322 extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) ; #line 329 extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) ; #line 333 extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) ; #line 340 extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) ; #line 344 extern void setlinebuf (FILE *__stream) ; #line 353 extern int fprintf (FILE *__restrict __stream, const char *__restrict __format, ...); #line 359 extern int printf (const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, const char *__restrict __format, ...) ; #line 368 extern int vfprintf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg); #line 374 extern int vprintf (const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) ; #line 383 extern int snprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, ...) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 3, 0))); #line 414 extern int vdprintf (int __fd, const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); #line 427 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) ; #line 433 extern int scanf (const char *__restrict __format, ...) ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) ; #line 445 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) _Pragma("map(fscanf, \"__isoc99_fscanf\")") ; extern int scanf (const char *__restrict __format, ...) _Pragma("map(scanf, \"__isoc99_scanf\")") ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) _Pragma("map(sscanf, \"__isoc99_sscanf\")"); #line 473 extern int vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; #line 481 extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; #line 485 extern int vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))); #line 496 extern int #line 499 vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vfscanf, \"__isoc99_vfscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vscanf, \"__isoc99_vscanf\")") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int #line 507 vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) _Pragma("map(vsscanf, \"__isoc99_vsscanf\")") __attribute__ ((__format__ (__scanf__, 2, 0))); #line 533 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); #line 540 extern int getchar (void); #line 552 extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); #line 563 extern int fgetc_unlocked (FILE *__stream); #line 575 extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); #line 582 extern int putchar (int __c); #line 596 extern int fputc_unlocked (int __c, FILE *__stream); #line 604 extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); #line 612 extern int getw (FILE *__stream); #line 615 extern int putw (int __w, FILE *__stream); #line 624 extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; #line 632 extern char *gets (char *__s) ; #line 658 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; #line 671 extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; #line 682 extern int fputs (const char *__restrict __s, FILE *__restrict __stream); #line 688 extern int puts (const char *__s); #line 695 extern int ungetc (int __c, FILE *__stream); #line 702 extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 708 extern size_t fwrite (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s) ; #line 730 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; #line 742 extern int fseek (FILE *__stream, long int __off, int __whence); #line 747 extern long int ftell (FILE *__stream) ; #line 752 extern void rewind (FILE *__stream); #line 766 extern int fseeko (FILE *__stream, __off_t __off, int __whence); #line 771 extern __off_t ftello (FILE *__stream) ; #line 791 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); #line 796 extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 819 extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; #line 828 extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; #line 839 extern void perror (const char *__s); #line 27 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 851 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/stdio.h" extern int fileno (FILE *__stream) ; #line 856 extern int fileno_unlocked (FILE *__stream) ; #line 866 extern FILE *popen (const char *__command, const char *__modes) ; #line 872 extern int pclose (FILE *__stream); #line 878 extern char *ctermid (char *__s) ; #line 906 extern void flockfile (FILE *__stream) ; #line 910 extern int ftrylockfile (FILE *__stream) ; #line 913 extern void funlockfile (FILE *__stream) ; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/include-fixed/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 55 "/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/sys-include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; #line 64 extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; #line 73 extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; #line 89 extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; #line 101 extern double exp (double __x) ; extern double __exp (double __x) ; #line 104 extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; #line 107 extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; #line 110 extern double log (double __x) ; extern double __log (double __x) ; #line 113 extern double log10 (double __x) ; extern double __log10 (double __x) ; #line 116 extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 129 extern double expm1 (double __x) ; extern double __expm1 (double __x) ; #line 132 extern double log1p (double __x) ; extern double __log1p (double __x) ; Found header files ['spai.h'] in ['/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.spai(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:487) TESTING: checkSharedLibrary from PETSc.packages.spai(config/BuildSystem/config/package.py:487) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Mathematica(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Mathematica(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Checking for program /soft/perftools/darshan/darshan/bin/cmake...not found Checking for program /soft/compilers/wrappers/xl/cmake...not found Checking for program /home/pwang/bin/cmake...not found Checking for program /soft/environment/softenv-1.6.2/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /usr/X11R6/bin/cmake...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/gnu-linux/bin/cmake...not found Checking for program /bgsys/drivers/V1R2M1/ppc64/hlcs/bin/cmake...not found Checking for program /soft/debuggers/scripts/bin/cmake...not found Checking for program /soft/accttools/bin/cmake...not found Checking for program /soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bin/cmake...not found Checking for program /soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bin/cmake...not found Checking for program /soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bin/cmake...not found Checking for program /home/pwang/cmake...not found Checking for program /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/bin/win32fe/cmake...not found ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.metis(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.parmetis(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MUMPS(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.MUMPS(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Prometheus(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Prometheus(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SuperLU_DIST(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.SuperLU_DIST(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Matlab(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/packages/Matlab.py:36) TESTING: alternateConfigureLibrary from PETSc.packages.Matlab(config/PETSc/packages/Matlab.py:36) ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MatlabEngine(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.MatlabEngine(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.valgrind(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:433) TESTING: configureLibrary from PETSc.packages.valgrind(config/BuildSystem/config/package.py:433) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/usr/local/include /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/usr/local/include /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/libraries.py:133) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/usr/local/include /tmp/petsc-lj0zFz/config.headers/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/usr/local/include /tmp/petsc-lj0zFz/config.headers/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/config.headers/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") sh: uname -s Executing: uname -s sh: Linux sh: uname -s Executing: uname -s sh: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.P3Dlib(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.P3Dlib(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.expat(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.expat(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Suggar(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Suggar(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.babel(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.babel(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ml(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.ml(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from PETSc.packages.X(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/packages/X.py:115) TESTING: configureLibrary from PETSc.packages.X(config/PETSc/packages/X.py:115) Checks for X windows, sets PETSC_HAVE_X if found, and defines X_CFLAGS, X_PRE_LIBS, X_LIBS, and X_EXTRA_LIBS All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.packages.X sh: xmkmf Executing: xmkmf sh: Error using Xmake: Could not execute "xmkmf": /bin/sh: xmkmf: command not found sh: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.packages.X /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c Executing: mpicc -E -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.packages.X /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c sh: Possible ERROR while running preprocessor: "/tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c", line 3.10: 1506-296 (S) #include file not found. ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c", line 3.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" #include Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -O /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { XSetWMName(); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.packages.X/conftest -O /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -lX11 Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.packages.X/conftest -O /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -lX11 sh: Possible ERROR while running linker: /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lX11 output: ret = 256 error message = {/bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld: cannot find -lX11 } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/PETSc.packages.X/conftest -O /tmp/petsc-lj0zFz/PETSc.packages.X/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl -lX11 Source: #include "confdefs.h" #include "conffix.h" int main() { XSetWMName(); ; return 0; } Popping language C Could not find X libraries ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Triangle(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Triangle(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Zoltan(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.Zoltan(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.afterimage(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/BuildSystem/config/package.py:491) TESTING: alternateConfigureLibrary from PETSc.packages.afterimage(config/BuildSystem/config/package.py:491) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.utilities.Regression(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/Regression.py:32) TESTING: configureRegression from PETSc.utilities.Regression(config/PETSc/utilities/Regression.py:32) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran HYPRE SPAI F90 F90_NoComplex Fortran_NoComplex" ================================================================================ TEST configureMissingDefines from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:35) TESTING: configureMissingDefines from PETSc.utilities.missing(config/PETSc/utilities/missing.py:35) Checks for limits All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.utilities.missing sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:45) TESTING: configureMissingUtypeTypedefs from PETSc.utilities.missing(config/PETSc/utilities/missing.py:45) Checks if u_short is undefined sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:51) TESTING: configureMissingFunctions from PETSc.utilities.missing(config/PETSc/utilities/missing.py:51) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:71) TESTING: configureMissingSignals from PETSc.utilities.missing(config/PETSc/utilities/missing.py:71) Check for missing signals, and define MISSING_ if necessary sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:88) TESTING: configureMissingGetdomainnamePrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:88) sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:110) TESTING: configureMissingSrandPrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:110) sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.utilities.missing/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language Cxx ================================================================================ TEST configureMissingIntelFastPrototypes from PETSc.utilities.missing(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/utilities/missing.py:134) TESTING: configureMissingIntelFastPrototypes from PETSc.utilities.missing(config/PETSc/utilities/missing.py:134) ================================================================================ TEST configureInline from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:624) TESTING: configureInline from PETSc.Configure(config/PETSc/Configure.py:624) Get a generic inline keyword, depending on the language Defined "STATIC_INLINE" to "static inline" Defined "RESTRICT" to "restrict" All intermediate test results are stored in /tmp/petsc-lj0zFz/PETSc.Configure sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 4.15: 1506-221 (S) Initializer must be a valid constant expression. } Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:491) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:491) Sees if there are any prefetch functions supported sh: uname -s Executing: uname -s sh: Linux Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 3.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 6.41: 1506-045 (S) Undeclared identifier _MM_HINT_NTA. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 3.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 6.28: 1506-045 (S) Undeclared identifier _MM_HINT_NTA. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:561) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:561) Sees if __attribute((unused)) is supported Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(void){ return 1;} int main() { int i = myfunc(); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureExpect from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:573) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:573) Sees if the __builtin_expect directive is supported Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:580) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:580) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.Configure/conftest.cc Executing: mpicxx -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.Configure/conftest.cc sh: Possible ERROR while running compiler: error message = {1540-5200 (W) The option "rtti=dyna" is not supported. } Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicxx -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -qrtti=dyna -O -+ /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:602) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:602) Determine what to use for uintptr_t Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:637) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:637) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:650) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:650) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:656) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:656) Win32 non-cygwin specific stuff Checking for function GetComputerName in library ['Kernel32.lib'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.17: 1506-045 (S) Undeclared identifier NULL. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.22: 1506-045 (S) Undeclared identifier NULL. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetComputerName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetComputerName in library ['kernel32'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.17: 1506-045 (S) Undeclared identifier NULL. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.22: 1506-045 (S) Undeclared identifier NULL. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetComputerName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetUserName in library ['Advapi32.lib'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.13: 1506-045 (S) Undeclared identifier NULL. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.18: 1506-045 (S) Undeclared identifier NULL. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetUserName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetUserName in library ['advapi32'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.13: 1506-045 (S) Undeclared identifier NULL. "/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 7.18: 1506-045 (S) Undeclared identifier NULL. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetUserName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetDC in library ['User32.lib'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetDC(0);; return 0; } Compile failed inside link Popping language C Checking for function GetDC in library ['user32'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetDC(0);; return 0; } Compile failed inside link Popping language C Checking for function CreateCompatibleDC in library ['Gdi32.lib'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { CreateCompatibleDC(0);; return 0; } Compile failed inside link Popping language C Checking for function CreateCompatibleDC in library ['gdi32'] [] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/config.libraries/conftest.c", line 4.10: 1506-296 (S) #include file not found. } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { CreateCompatibleDC(0);; return 0; } Compile failed inside link Popping language C Checking for type: int32_t sh: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.types/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.types/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.types/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 3.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 6.15: 1506-275 (S) Unexpected text a encountered. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 6.1: 1506-045 (S) Undeclared identifier LARGE_INTEGER. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 7.7: 1506-277 (S) Syntax error: possible missing ';' or ','? "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 7.1: 1506-045 (S) Undeclared identifier DWORD. } Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {"/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 3.10: 1506-296 (S) #include file not found. "/tmp/petsc-lj0zFz/PETSc.Configure/conftest.c", line 7.13: 1506-045 (S) Undeclared identifier O_BINARY. } Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" ================================================================================ TEST configureDefaultArch from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:723) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:723) ================================================================================ TEST configureScript from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:740) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:740) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:775) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:775) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['-@echo "Now to check if the libraries are working do:"', '-@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} test"', '-@echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:789) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:789) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:794) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:794) Checking for function flush in library [''] ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush(); int main() { flush() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Possible ERROR while running linker: /tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `flush' output: ret = 256 error message = {/tmp/petsc-lj0zFz/config.libraries/conftest.o:(.text+0xc): undefined reference to `flush' } Pushing language C Popping language C in mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush(); int main() { flush() ; return 0; } Popping language C Checking for function flush_ in library [''] ['-L/bgsys/drivers/V1R2M1/ppc64/comm/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/lib64', '-L/bgsys/drivers/V1R2M1/ppc64/spi/lib', '-L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib', '-L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64', '-L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc', '-L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib', '-L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64', '-Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64', '-lmpichf90-xl', '-lxlf90_r', '-lxlomp_ser', '-lxlfmath', '-lm', '-lm'] Pushing language C sh: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/config.libraries/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/config.libraries/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); int main() { flush_() ; return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/config.libraries/conftest -O /tmp/petsc-lj0zFz/config.libraries/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Popping language C Defined "HAVE_FLUSH_" to "1" ================================================================================ TEST configureFeatureTestMacros from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:547) TESTING: configureFeatureTestMacros from PETSc.Configure(config/PETSc/Configure.py:547) Checks if certain feature test macros are support sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Defined "_POSIX_C_SOURCE_200112L" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/Configure.py:556) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:556) Checks if atoll exists sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C sh: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl Executing: mpicc -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl sh: Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to " -O " Popping language C Defined make macro "CPP_FLAGS" to " " Pushing language C Defined make macro "PCC" to "mpicc" Defined make macro "PCC_FLAGS" to " -O " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpicc" Defined make macro "PCC_LINKER_FLAGS" to " -O" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to " -O " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC sh: mpif90 -V Executing: mpif90 -V sh: export XL_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/xlf.cfg.rhel6.5.gcc447:bgxlf90_r export XLF_USR_CONFIG=/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/etc/V1R2M1.xlf.cfg.rhel6.3.gcc446 /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/bin/ld --eh-frame-hdr -Qy -melf64ppc -static -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crt1.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crti.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtbeginT.o -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -R/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib -lmpichf90-xl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lpthread -lxlf90_r -lxlopt -lxlomp_ser -lxl -lxlfmath -ldl -lpthread -lm -lc -lgcc -lgcc_eh -ldl -lm --start-group -lc -lnss_files -lnss_dns -lresolv --end-group -lgcc -lgcc_eh -lgcc -ldl /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/crtend.o /bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/lib/crtn.o | /bin/awk 'BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print $0;}else{a=1;if((s=="")&& $0 ~ /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 && s!=""){print s}}' rm /tmp/optf.24920DdLTYf rm /tmp/version.24920KFe2Ml Defined make macro "FC_LINKER" to "mpif90" Defined make macro "FC_LINKER_FLAGS" to " -O " Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-qmoddir=" Pushing language C Defined make macro "SL_LINKER" to "mpicc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" sh: CC -VV Executing: CC -VV sh: Defined "USE_SOCKET_VIEWER" to "1" sh: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c Executing: mpicc -c -o /tmp/petsc-lj0zFz/PETSc.Configure/conftest.o -I/tmp/petsc-lj0zFz/config.compilers -I/tmp/petsc-lj0zFz/config.setCompilers -I/tmp/petsc-lj0zFz/config.headers -I/tmp/petsc-lj0zFz/PETSc.utilities.cacheDetails -I/tmp/petsc-lj0zFz/config.functions -I/tmp/petsc-lj0zFz/config.packages.MPI -I/tmp/petsc-lj0zFz/PETSc.utilities.scalarTypes -I/tmp/petsc-lj0zFz/PETSc.packages.pthread -I/tmp/petsc-lj0zFz/PETSc.packages.X -I/tmp/petsc-lj0zFz/PETSc.utilities.missing -I/tmp/petsc-lj0zFz/config.libraries -I/tmp/petsc-lj0zFz/config.types -I/tmp/petsc-lj0zFz/PETSc.Configure -O /tmp/petsc-lj0zFz/PETSc.Configure/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_SPAI" to "1" Defined make macro "SPAI_LIB" to "-Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai" Defined make macro "SPAI_INCLUDE" to "-I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++" Defined make macro "HYPRE_INCLUDE" to "-I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "-lpthread" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lpetsc -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -lpthread -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -lmpichcxx-xl -libmc++ -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -lpthread -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -lmpichcxx-xl -libmc++ -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/include -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/include -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk" Defined make macro "DESTDIR" to "/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt" Defined "LIB_DIR" to ""/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-mpi-dir=/soft/compilers/wrappers/xl/ --with-blas-lib=/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a --with-lapack-lib=/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a --with-metis=/soft/libraries/alcf/current/xl/METIS/ --with-parmetis=/soft/libraries/alcf/current/xl/PARMETIS --download-hypre=1 --download-spai --with-debugging=0" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Skipping cmakeboot due to old python version: (2, 6, 6, 'final', 0) ================================================================================ ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpi4py(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/packages/mpi4py.py:49) TESTING: alternateConfigureLibrary from PETSc.packages.mpi4py(config/PETSc/packages/mpi4py.py:49) Defined make rule "mpi4py" with dependencies "" and code [] Defined make rule "mpi4py_noinstall" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.petsc4py(/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/config/PETSc/packages/petsc4py.py:65) TESTING: alternateConfigureLibrary from PETSc.packages.petsc4py(config/PETSc/packages/petsc4py.py:65) Defined make rule "petsc4py" with dependencies "" and code [] **** arch-linux2-c-opt/conf/petscvariables **** FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -qmoddir= PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -O LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpicc CC_FLAGS = -O PETSC_PRECISION = double PETSC_LIB_BASIC = -lpetsc FC_FLAGS = -O BLASLAPACK_LIB = -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas SPAI_LIB = -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai PCC = mpicc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -lpthread -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -lmpichcxx-xl -libmc++ -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHLIBS = libpetsc CONFIGURE_OPTIONS = --with-mpi-dir=/soft/compilers/wrappers/xl/ --with-blas-lib=/soft/libraries/alcf/current/xl/BLAS/lib/libblas.a --with-lapack-lib=/soft/libraries/alcf/current/xl/LAPACK/lib/liblapack.a --with-metis=/soft/libraries/alcf/current/xl/METIS/ --with-parmetis=/soft/libraries/alcf/current/xl/PARMETIS --download-hypre=1 --download-spai --with-debugging=0 PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = -lpthread PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/include -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include FC_LINKER = mpif90 HYPRE_LIB = -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_LINKER = mpicc PCC_LINKER_FLAGS = -O PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/include -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -O PTHREAD_INCLUDE = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc SPAI_INCLUDE = -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt FC_MODULE_FLAG = -I PETSC_WITH_EXTERNAL_LIB = -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lpetsc -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ -lpthread -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas -L/soft/compilers/ibmcmp-aug2013/xlf/bg/14.1/bglib64 -lmpichf90-xl -lxlf90_r -lxlomp_ser -lxlfmath -lm -lm -lmpichcxx-xl -libmc++ -ldl -lmpich-xl -lopa-xl -lmpl-xl -lpami-gcc -lSPI -lSPI_cnk -lrt -lpthread -lstdc++ -lxlopt -lxl -lnss_files -lnss_dns -lresolv -lgcc_eh -ldl MPI_INCLUDE = -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpicc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpicc CXX = mpicxx FC = mpif90 CXXCPP = mpicxx -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpicc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 SVN = svn HG = hg CVS = cvs SHELL = /bin/sh MAKE_NP = 16 GZIP = /bin/gzip MV = /bin/mv PYTHON = /usr/bin/python MAKE = /usr/bin/make MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i OMAKE = /usr/bin/make --no-print-directory SED = /bin/sed RM = /bin/rm -f DIFF = /usr/bin/diff -w GREP = /bin/grep CP = /bin/cp STRINGS = /usr/bin/strings DATAFILESPATH = TEST_RUNS = C Fortran HYPRE SPAI F90 F90_NoComplex Fortran_NoComplex MPIEXEC = /bin/false BUILDSHAREDLIB = no GDB = /usr/bin/gdb DSYMUTIL = true **** arch-linux2-c-opt/conf/petscrules **** shared_install: -@echo "Now to check if the libraries are working do:" -@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} test" -@echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC} ${SOBJSC}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} shared_arch: .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $< petsc4py: mpi4py_noinstall: mpi4py: **** arch-linux2-c-opt/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_STATIC_INLINE #define PETSC_STATIC_INLINE static inline #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_RESTRICT #define PETSC_RESTRICT restrict #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 1 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 3 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 2 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_HAVE_HYPRE #define PETSC_HAVE_HYPRE 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib" #endif #ifndef PETSC_HAVE_SPAI #define PETSC_HAVE_SPAI 1 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC__POSIX_C_SOURCE_200112L #define PETSC__POSIX_C_SOURCE_200112L 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH_ #define PETSC_HAVE_FLUSH_ 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA 0 #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_MEMORY_H #define PETSC_HAVE_MEMORY_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_HAVE_FORTRAN_NOUNDERSCORE #define PETSC_HAVE_FORTRAN_NOUNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT restrict #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT restrict #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_LIBBLAS #define PETSC_HAVE_LIBBLAS 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBXLFMATH #define PETSC_HAVE_LIBXLFMATH 1 #endif #ifndef PETSC_HAVE_LIBXLF90_R #define PETSC_HAVE_LIBXLF90_R 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBLAPACK #define PETSC_HAVE_LIBLAPACK 1 #endif #ifndef PETSC_HAVE_LIBSPAI #define PETSC_HAVE_LIBSPAI 1 #endif #ifndef PETSC_HAVE_LIBHYPRE #define PETSC_HAVE_LIBHYPRE 1 #endif #ifndef PETSC_HAVE_LIBMPICHF90_XL #define PETSC_HAVE_LIBMPICHF90_XL 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBIBMC__ #define PETSC_HAVE_LIBIBMC__ 1 #endif #ifndef PETSC_HAVE_LIBM #define PETSC_HAVE_LIBM 1 #endif #ifndef PETSC_HAVE_LIBXLOMP_SER #define PETSC_HAVE_LIBXLOMP_SER 1 #endif #ifndef PETSC_HAVE_LIBMPICHCXX_XL #define PETSC_HAVE_LIBMPICHCXX_XL 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "arch-linux2-c-opt" #endif #ifndef PETSC_DIR #define PETSC_DIR "/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6" #endif #ifndef HAVE_GZIP #define HAVE_GZIP 1 #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_EXTERN_CXX #define PETSC_USE_EXTERN_CXX #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_MISSING_DREAL #define PETSC_MISSING_DREAL 1 #endif #ifndef PETSC_WORDS_BIGENDIAN #define PETSC_WORDS_BIGENDIAN 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE___INT64 #define PETSC_HAVE___INT64 1 #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 4 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETPWUID #define PETSC_HAVE_GETPWUID 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_IARGC_ #define PETSC_HAVE_IARGC_ 1 #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPIX_IALLREDUCE #define PETSC_HAVE_MPIX_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_PETSC_USE_BACKWARD_LOOP #define PETSC_PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_HAVE_GETARG #define PETSC_HAVE_GETARG 1 #endif #ifndef PETSC_HAVE_BGL_IARGC #define PETSC_HAVE_BGL_IARGC 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC_USE_GDB_DEBUGGER #define PETSC_USE_GDB_DEBUGGER 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #endif **** arch-linux2-c-opt/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- HYPRE: Install : Installed hypre into /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt SPAI: Install : Installed spai into /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt PETSc: Build : Set default architecture to arch-linux2-c-opt in conf/petscvariables File creation : Created arch-linux2-c-opt/conf/reconfigure-arch-linux2-c-opt.py for automatic reconfiguration Framework: File creation : Created makefile configure header arch-linux2-c-opt/conf/petscvariables File creation : Created makefile configure header arch-linux2-c-opt/conf/petscvariables File creation : Created configure header arch-linux2-c-opt/include/petscconf.h File creation : Created C specific configure header arch-linux2-c-opt/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpicc -O C++ Compiler: mpicxx -qrtti=dyna -O -+ Fortran Compiler: mpif90 -O Linkers: Static linker: /usr/bin/ar cr MPI: Includes: -I/soft/compilers/wrappers/xl/include -I/bgsys/drivers/V1R2M1/ppc64/comm/include -I/bgsys/drivers/V1R2M1/ppc64/comm/lib/xl -I/bgsys/drivers/V1R2M1/ppc64 -I/bgsys/drivers/V1R2M1/ppc64/comm/sys/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include -I/bgsys/drivers/V1R2M1/ppc64/spi/include/kernel/cnk BLAS/LAPACK: -Wl,-rpath,/soft/libraries/alcf/current/xl/LAPACK/lib -L/soft/libraries/alcf/current/xl/LAPACK/lib -llapack -Wl,-rpath,/soft/libraries/alcf/current/xl/BLAS/lib -L/soft/libraries/alcf/current/xl/BLAS/lib -lblas spai: Includes: -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include Library: -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lspai hypre: Includes: -I/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/include Library: -Wl,-rpath,/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -L/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6/arch-linux2-c-opt/lib -lHYPRE -L/bgsys/drivers/V1R2M1/ppc64/comm/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/lib64 -L/bgsys/drivers/V1R2M1/ppc64/spi/lib -L/bgsys/drivers/V1R2M1/ppc64/comm/sys/lib -L/soft/compilers/ibmcmp-aug2013/xlsmp/bg/3.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/xlmass/bg/7.3/bglib64 -L/soft/compilers/ibmcmp-aug2013/vac/bg/12.1/bglib64 -L/soft/compilers/ibmcmp-aug2013/vacpp/bg/12.1/bglib64 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6 -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/lib/gcc -L/bgsys/drivers/toolchain/V1R2M1_base/gnu-linux/powerpc64-bgq-linux/lib -Wl,-rpath,/soft/compilers/ibmcmp-aug2013/lib64/bg/bglib64 -lmpichcxx-xl -libmc++ Arch: pthread: Library: -lpthread PETSc: PETSC_ARCH: arch-linux2-c-opt PETSC_DIR: /gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 Clanguage: C Memory alignment: 16 Scalar type: real Precision: double shared libraries: disabled dynamic loading: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (legacy build): make PETSC_DIR=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 PETSC_ARCH=arch-linux2-c-opt all or (experimental with python): PETSC_DIR=/gpfs/vesta-home/pwang/Zsoft/petsc-3.3-p6 PETSC_ARCH=arch-linux2-c-opt ./config/builder.py xxx=========================================================================xxx