==22547== Memcheck, a memory error detector ==22547== Copyright (C) 2002-2011, and GNU GPL'd, by Julian Seward et al. ==22547== Using Valgrind-3.7.0 and LibVEX; rerun with -h for copyright info ==22547== Command: ./multiplecombined -malloc off -usermesh 1 -fC Square.1.tri -fV Square.1.points -pc_type lu -pc_factor_mat_solver_package superlu_dist -maxmode 10 -b 0.001 ==22547== Parent PID: 22545 ==22547== --22547-- --22547-- Valgrind options: --22547-- --suppressions=/usr/lib/valgrind/debian-libc6-dbg.supp --22547-- --tool=memcheck --22547-- --leak-check=full --22547-- --track-origins=yes --22547-- -v --22547-- --log-file=nlinopt.log --22547-- Contents of /proc/version: --22547-- Linux version 3.5.0-39-generic (buildd@roseapple) (gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5) ) #60~precise1-Ubuntu SMP Wed Aug 14 15:38:41 UTC 2013 --22547-- Arch and hwcaps: AMD64, amd64-sse3-cx16 --22547-- Page sizes: currently 4096, max supported 4096 --22547-- Valgrind library directory: /usr/lib/valgrind --22546-- Reading syms from /home/garnet/Dropbox/gvresearch/petsc/multiplecombined (0x400000) --22546-- Reading syms from /lib/x86_64-linux-gnu/ld-2.15.so (0x4000000) --22546-- Considering /lib/x86_64-linux-gnu/ld-2.15.so .. --22546-- .. CRC mismatch (computed 269450ce wanted 94894502) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/ld-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /usr/lib/valgrind/memcheck-amd64-linux (0x38000000) --22546-- Considering /usr/lib/valgrind/memcheck-amd64-linux .. --22546-- .. CRC mismatch (computed fd32bc40 wanted 1b1bde8c) --22546-- object doesn't have a symbol table --22546-- object doesn't have a dynamic symbol table --22546-- Reading suppressions file: /usr/lib/valgrind/debian-libc6-dbg.supp --22546-- Reading suppressions file: /usr/lib/valgrind/default.supp ==22546== embedded gdbserver: reading from /tmp/vgdb-pipe-from-vgdb-to-22546-by-garnet-on-??? ==22546== embedded gdbserver: writing to /tmp/vgdb-pipe-to-vgdb-from-22546-by-garnet-on-??? ==22546== embedded gdbserver: shared mem /tmp/vgdb-pipe-shared-mem-vgdb-22546-by-garnet-on-??? ==22546== ==22546== TO CONTROL THIS PROCESS USING vgdb (which you probably ==22546== don't want to do, unless you know exactly what you're doing, ==22546== or are doing some strange experiment): ==22546== /usr/lib/valgrind/../../bin/vgdb --pid=22546 ...command... ==22546== ==22546== TO DEBUG THIS PROCESS USING GDB: start GDB like this ==22546== /path/to/gdb ./multiplecombined ==22546== and then give GDB the following command ==22546== target remote | /usr/lib/valgrind/../../bin/vgdb --pid=22546 ==22546== --pid is optional if only one valgrind process is running ==22546== --22546-- REDIR: 0x40189e0 (strlen) redirected to 0x380625c7 (???) --22546-- Reading syms from /usr/lib/valgrind/vgpreload_core-amd64-linux.so (0x4a25000) --22547-- Considering /usr/lib/valgrind/vgpreload_core-amd64-linux.so .. --22547-- .. CRC mismatch (computed 8f05ac98 wanted c6d0ab1a) --22546-- object doesn't have a symbol table --22547-- Reading syms from /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so (0x4c27000) --22546-- Considering /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so .. --22547-- .. CRC mismatch (computed fc059af4 wanted ffc668e8) --22547-- object doesn't have a symbol table --22546-- REDIR: 0x4018850 (index) redirected to 0x4c2bc60 (index) --22546-- REDIR: 0x40188d0 (strcmp) redirected to 0x4c2cc20 (strcmp) --22546-- Reading syms from /opt/petsc/linux_nodebug/lib/libpetsc.so (0x4e32000) --22546-- Reading syms from /lib/x86_64-linux-gnu/libm-2.15.so (0x5de0000) --22547-- Considering /lib/x86_64-linux-gnu/libm-2.15.so .. --22546-- .. CRC mismatch (computed e81d4037 wanted fad28d48) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libm-2.15.so .. --22547-- .. CRC is valid --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.16 (0x60dc000) --22546-- Considering /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.16 .. --22547-- .. CRC mismatch (computed ef748751 wanted e44c0328) --22546-- object doesn't have a symbol table --22546-- Reading syms from /opt/petsc/linux_nodebug/lib/libmpich.so.10.0.4 (0x63dc000) --22547-- Reading syms from /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x679f000) --22547-- Considering /lib/x86_64-linux-gnu/libgcc_s.so.1 .. --22547-- .. CRC mismatch (computed c8e4b229 wanted 098e39f6) --22547-- object doesn't have a symbol table --22546-- Reading syms from /usr/lib/libgsl.so.0.16.0 (0x69b5000) --22546-- Considering /usr/lib/libgsl.so.0.16.0 .. --22547-- .. CRC mismatch (computed 8ad84a92 wanted 5acdda24) --22547-- object doesn't have a symbol table --22547-- Reading syms from /usr/lib/libgslcblas.so.0.0.0 (0x6df1000) --22547-- Considering /usr/lib/libgslcblas.so.0.0.0 .. --22547-- .. CRC mismatch (computed cefe5c0b wanted 28bc8067) --22546-- object doesn't have a symbol table --22546-- Reading syms from /lib/x86_64-linux-gnu/libc-2.15.so (0x7036000) --22547-- Considering /lib/x86_64-linux-gnu/libc-2.15.so .. --22547-- .. CRC mismatch (computed d1cc6f49 wanted 7994f9f0) --22547-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libc-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0 (0x73f5000) --22546-- Considering /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0 .. --22547-- .. CRC mismatch (computed b515820a wanted cbe61b79) --22547-- object doesn't have a symbol table --22546-- Reading syms from /opt/petsc/linux_nodebug/lib/libparmetis.so (0x772a000) --22547-- Reading syms from /opt/petsc/linux_nodebug/lib/libmetis.so (0x7966000) --22547-- Reading syms from /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0 (0x7bcb000) --22547-- Considering /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0 .. --22547-- .. CRC mismatch (computed b58f9ea9 wanted 0cdb1b6a) --22546-- object doesn't have a symbol table --22546-- Reading syms from /lib/x86_64-linux-gnu/libpthread-2.15.so (0x7ee2000) --22546-- Considering /lib/x86_64-linux-gnu/libpthread-2.15.so .. --22546-- .. CRC mismatch (computed 8e430e5b wanted e619a829) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libpthread-2.15.so .. --22547-- .. CRC is valid --22546-- Reading syms from /lib/x86_64-linux-gnu/libdl-2.15.so (0x80ff000) --22547-- Considering /lib/x86_64-linux-gnu/libdl-2.15.so .. --22547-- .. CRC mismatch (computed 1e39c2e0 wanted 5d14a047) --22547-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libdl-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /opt/petsc/linux_nodebug/lib/libmpl.so.1.0.0 (0x8303000) --22546-- Reading syms from /lib/x86_64-linux-gnu/librt-2.15.so (0x8508000) --22546-- Considering /lib/x86_64-linux-gnu/librt-2.15.so .. --22546-- .. CRC mismatch (computed aca1815f wanted f26cc34e) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/librt-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0 (0x8710000) --22547-- object doesn't have a symbol table --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0 (0x892e000) --22546-- Considering /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0 .. --22546-- .. CRC mismatch (computed f316b3f1 wanted 57694e00) --22547-- object doesn't have a symbol table --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0 (0x8b64000) --22546-- Considering /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0 .. --22547-- .. CRC mismatch (computed 82cbef80 wanted ca72644f) --22546-- object doesn't have a symbol table --22546-- Reading syms from /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0 (0x8d67000) --22546-- Considering /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0 .. --22546-- .. CRC mismatch (computed aa48a267 wanted d38510a9) --22547-- object doesn't have a symbol table --22546-- REDIR: 0x70c2e40 (strcasecmp) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x70bf1e0 (strnlen) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x70c5110 (strncasecmp) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x70c0bd0 (__GI_strrchr) redirected to 0x4c2ba80 (__GI_strrchr) --22546-- REDIR: 0x70ba2c0 (calloc) redirected to 0x4c29cf0 (calloc) --22546-- REDIR: 0x70b8f50 (malloc) redirected to 0x4c2b660 (malloc) --22546-- REDIR: 0x70bf100 (__GI_strlen) redirected to 0x4c2bfc0 (__GI_strlen) --22546-- REDIR: 0x70bf300 (__GI_strncmp) redirected to 0x4c2c480 (__GI_strncmp) --22547-- REDIR: 0x70bf0b0 (strlen) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x7198be0 (__strlen_sse2_pminub) redirected to 0x4c2bfa0 (strlen) --22547-- REDIR: 0x70c77f0 (memcpy@@GLIBC_2.14) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x717dfa0 (__memcpy_ssse3_back) redirected to 0x4c2cf30 (memcpy@@GLIBC_2.14) --22547-- REDIR: 0x70c1c20 (memset) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x70c1c60 (__GI_memset) redirected to 0x4c2e080 (memset) --22547-- REDIR: 0x70c0b50 (strncpy) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x70cd1a0 (__strncpy_sse2_unaligned) redirected to 0x4c2c180 (strncpy) --22547-- REDIR: 0x70b9560 (free) redirected to 0x4c2a7c0 (free) --22547-- REDIR: 0x70c8d10 (strchrnul) redirected to 0x4c2e3b0 (strchrnul) --22546-- REDIR: 0x70bd5c0 (strcmp) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x7167e20 (__strcmp_sse42) redirected to 0x4c2cb60 (strcmp) --22547-- REDIR: 0x70bf2c0 (strncmp) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x7168bd0 (__strncmp_sse42) redirected to 0x4c2c400 (strncmp) --22547-- REDIR: 0x70c12b0 (memchr) redirected to 0x4c2cce0 (memchr) --22546-- REDIR: 0x70cc4c0 (__GI_strncpy) redirected to 0x4c2c2c0 (__GI_strncpy) --22546-- REDIR: 0x70bd540 (__GI_strchr) redirected to 0x4c2bb60 (__GI_strchr) --22547-- REDIR: 0x716bf70 (__strncasecmp_sse42) redirected to 0x4c2c600 (strncasecmp) --22546-- REDIR: 0x70bd600 (__GI_strcmp) redirected to 0x4c2cbc0 (__GI_strcmp) --22547-- REDIR: 0x70c2ce0 (__GI_stpcpy) redirected to 0x4c2de10 (__GI_stpcpy) --22546-- Reading syms from /lib/x86_64-linux-gnu/libnss_files-2.15.so (0x936d000) --22546-- Considering /lib/x86_64-linux-gnu/libnss_files-2.15.so .. --22546-- .. CRC mismatch (computed 93b6e136 wanted 0e7fce87) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libnss_files-2.15.so .. --22546-- .. CRC is valid --22546-- REDIR: 0x70bea90 (__GI_strcpy) redirected to 0x4c2c0b0 (__GI_strcpy) --22547-- REDIR: 0x70c8ac0 (rawmemchr) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x70c8b00 (__GI___rawmemchr) redirected to 0x4c2e400 (__GI___rawmemchr) --22547-- REDIR: 0x716a3c0 (__strcasecmp_sse42) redirected to 0x4c2c500 (strcasecmp) --22547-- REDIR: 0x70bd500 (index) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x7167d70 (__strchr_sse42) redirected to 0x4c2bb20 (index) --22547-- REDIR: 0x70b9660 (realloc) redirected to 0x4c2b730 (realloc) --22546-- REDIR: 0x70d63c0 (strstr) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x7169d50 (__strstr_sse42) redirected to 0x4c2e7a0 (strstr) --22546-- Reading syms from /lib/x86_64-linux-gnu/libnss_compat-2.15.so (0x957a000) --22546-- Considering /lib/x86_64-linux-gnu/libnss_compat-2.15.so .. --22546-- .. CRC mismatch (computed 0f99e502 wanted 9efdf084) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libnss_compat-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /lib/x86_64-linux-gnu/libnsl-2.15.so (0x9783000) --22546-- Considering /lib/x86_64-linux-gnu/libnsl-2.15.so .. --22546-- .. CRC mismatch (computed 7158b88c wanted 689f7851) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libnsl-2.15.so .. --22546-- .. CRC is valid --22546-- Reading syms from /lib/x86_64-linux-gnu/libnss_nis-2.15.so (0x999d000) --22546-- Considering /lib/x86_64-linux-gnu/libnss_nis-2.15.so .. --22546-- .. CRC mismatch (computed a282f977 wanted bc84fe4d) --22546-- Considering /usr/lib/debug/lib/x86_64-linux-gnu/libnss_nis-2.15.so .. --22546-- .. CRC is valid --22546-- REDIR: 0xffffffffff600400 (???) redirected to 0x380625bd (???) --22546-- REDIR: 0x70bf210 (__GI_strnlen) redirected to 0x4c2bf70 (__GI_strnlen) --22546-- REDIR: 0x70bea50 (strcpy) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x70ccb70 (__strcpy_sse2_unaligned) redirected to 0x4c2bfe0 (strcpy) --22546-- REDIR: 0x70bd300 (strcat) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22546-- REDIR: 0x70cf990 (__strcat_sse2_unaligned) redirected to 0x4c2bca0 (strcat) --22547-- REDIR: 0xffffffffff600000 (???) redirected to 0x380625b3 (???) --22547-- REDIR: 0x70b9a10 (memalign) redirected to 0x4c29b50 (memalign) --22547-- REDIR: 0x70bf280 (strncat) redirected to 0x4a25610 (_vgnU_ifunc_wrapper) --22547-- REDIR: 0x70d0280 (__strncat_sse2_unaligned) redirected to 0x4c2be60 (strncat) ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FE0B23: PetscSectionGetChart (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469BA9: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FE0B30: PetscSectionGetChart (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469BA9: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FBC0A1: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Invalid read of size 8 ==22547== at 0x4FBC0A8: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Address 0x7dcdcc is not stack'd, malloc'd or (recently) free'd ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C352: signal (signal.c:38) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C357: signal (signal.c:38) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C6B6: sigaction (sigaction.c:38) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Syscall param rt_sigaction(signum) contains uninitialised byte(s) ==22547== at 0x706C5A5: __libc_sigaction (sigaction.c:67) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Syscall param rt_sigaction(act->sa_mask) points to uninitialised byte(s) ==22547== at 0x706C5A5: __libc_sigaction (sigaction.c:67) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Address 0x7feffdee8 is on thread 1's stack ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x4F47571: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Use of uninitialised value of size 8 ==22547== at 0x4F47576: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x7083642: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Use of uninitialised value of size 8 ==22547== at 0x707E7EB: _itoa_word (_itoa.c:195) ==22547== by 0x7081B34: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x707E7F5: _itoa_word (_itoa.c:195) ==22547== by 0x7081B34: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== --22547-- Discarding syms at 0x957b260-0x9580bc8 in /lib/x86_64-linux-gnu/libnss_compat-2.15.so due to munmap() --22547-- Discarding syms at 0x999f0b0-0x99a5718 in /lib/x86_64-linux-gnu/libnss_nis-2.15.so due to munmap() --22547-- Discarding syms at 0x9787060-0x9794878 in /lib/x86_64-linux-gnu/libnsl-2.15.so due to munmap() --22547-- Discarding syms at 0x936f140-0x9376a08 in /lib/x86_64-linux-gnu/libnss_files-2.15.so due to munmap() ==22547== ==22547== HEAP SUMMARY: ==22547== in use at exit: 108,532 bytes in 511 blocks ==22547== total heap usage: 682 allocs, 171 frees, 153,799 bytes allocated ==22547== ==22547== Searching for pointers to 511 not-freed blocks ==22547== Checked 2,167,984 bytes ==22547== ==22547== 300 (60 direct, 240 indirect) bytes in 1 blocks are definitely lost in loss record 454 of 487 ==22547== at 0x4C2B6CD: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==22547== by 0x713B5A4: nss_parse_service_list (nsswitch.c:678) ==22547== by 0x713C065: __nss_database_lookup (nsswitch.c:175) ==22547== by 0x957E623: ??? ==22547== by 0x70F4C0C: getpwuid_r@@GLIBC_2.2.5 (getXXbyYY_r.c:256) ==22547== by 0x70F4502: getpwuid (getXXbyYY.c:117) ==22547== by 0x4F34F83: PetscGetUserName (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46888: PetscErrorPrintfInitialize (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F24FB1: PetscInitialize (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x409994: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== ==22547== LEAK SUMMARY: ==22547== definitely lost: 60 bytes in 1 blocks ==22547== indirectly lost: 240 bytes in 10 blocks ==22547== possibly lost: 0 bytes in 0 blocks ==22547== still reachable: 108,232 bytes in 500 blocks ==22547== suppressed: 0 bytes in 0 blocks ==22547== Reachable blocks (those to which a pointer was found) are not shown. ==22547== To see them, rerun with: --leak-check=full --show-reachable=yes ==22547== ==22547== ERROR SUMMARY: 17 errors from 15 contexts (suppressed: 2 from 2) ==22547== ==22547== 1 errors in context 1 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x7083642: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 2 of 15: ==22547== Use of uninitialised value of size 8 ==22547== at 0x4F47576: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 3 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x4F47571: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 4 of 15: ==22547== Syscall param rt_sigaction(act->sa_mask) points to uninitialised byte(s) ==22547== at 0x706C5A5: __libc_sigaction (sigaction.c:67) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Address 0x7feffdee8 is on thread 1's stack ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 5 of 15: ==22547== Syscall param rt_sigaction(signum) contains uninitialised byte(s) ==22547== at 0x706C5A5: __libc_sigaction (sigaction.c:67) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 6 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C6B6: sigaction (sigaction.c:38) ==22547== by 0x706C3CF: signal (signal.c:49) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 7 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C357: signal (signal.c:38) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 8 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x706C352: signal (signal.c:38) ==22547== by 0x4F47558: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 9 of 15: ==22547== Invalid read of size 8 ==22547== at 0x4FBC0A8: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Address 0x7dcdcc is not stack'd, malloc'd or (recently) free'd ==22547== ==22547== ==22547== 1 errors in context 10 of 15: ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FBC0A1: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 11 of 15: ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FE0B30: PetscSectionGetChart (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469BA9: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 1 errors in context 12 of 15: ==22547== Use of uninitialised value of size 8 ==22547== at 0x4FE0B23: PetscSectionGetChart (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469BA9: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x546F689: DMPlexCreatePartition (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x547641C: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x406CA5: CreateMeshFromFile(_p_appCtx*) (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== by 0x409B99: main (in /home/garnet/Dropbox/gvresearch/petsc/multiplecombined) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 2 errors in context 13 of 15: ==22547== Conditional jump or move depends on uninitialised value(s) ==22547== at 0x707E7F5: _itoa_word (_itoa.c:195) ==22547== by 0x7081B34: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== ==22547== ==22547== 2 errors in context 14 of 15: ==22547== Use of uninitialised value of size 8 ==22547== at 0x707E7EB: _itoa_word (_itoa.c:195) ==22547== by 0x7081B34: vfprintf (vfprintf.c:2007) ==22547== by 0x70841A3: buffered_vfprintf (vfprintf.c:2313) ==22547== by 0x707EBDD: vfprintf (vfprintf.c:1316) ==22547== by 0x713F3D7: __vfprintf_chk (vfprintf_chk.c:35) ==22547== by 0x4F76BC9: PetscVFPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F46BBC: PetscErrorPrintfDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F47591: PetscSignalHandlerDefault (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x4F476E7: PetscSignalHandler_Private(int) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x706C49F: ??? (in /lib/x86_64-linux-gnu/libc-2.15.so) ==22547== by 0x4FBC0A7: ISGetIndices (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== by 0x5469C69: DMPlexEnlargePartition(_p_DM*, int const*, int const*, _p_PetscSection*, _p_IS*, _p_PetscSection**, _p_IS**) (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== Uninitialised value was created by a stack allocation ==22547== at 0x5476143: DMPlexDistribute (in /opt/petsc/linux_nodebug/lib/libpetsc.so) ==22547== --22547-- --22547-- used_suppression: 2 dl-hack3-cond-1 ==22547== ==22547== ERROR SUMMARY: 17 errors from 15 contexts (suppressed: 2 from 2)