================================================================================ Starting Configure Run at Wed Jan 16 12:46:58 2013 Configure Options: ./configure --with-arpack-dir=/home/jfonseca/NEMOdevcarter/libs/ARPACK/ --with-arpack-flags=-L/home/jfonseca/NEMOdevcarter/libs/ARPACK/ -lparpack -larpack Working directory: /home/jfonseca/NEMOdevcarter/libs/slepc/build-real Python version: 2.7.3 (default, Dec 12 2012, 15:35:01) [GCC Intel(R) C++ gcc 4.4 mode] make: /usr/bin/make PETSc source directory: /home/jfonseca/NEMOdevcarter/libs/petsc/build-real PETSc install directory: /home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux PETSc version: 3.3 PETSc architecture: linux SLEPc source directory: /home/jfonseca/NEMOdevcarter/libs/slepc/build-real SLEPc install directory: /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/linux ================================================================================ Checking PETSc installation... WARNING: using PETSc development version #include "petscksp.h" EXTERN_C_BEGIN EXTERN_C_END int main() { PetscInitialize(PETSC_NULL,PETSC_NULL,PETSC_NULL,PETSC_NULL); VecCreate(PETSC_NULL,PETSC_NULL); MatCreate(PETSC_NULL,PETSC_NULL); KSPCreate(PETSC_NULL,PETSC_NULL); return 0; } make[1]: Entering directory `/tmp/slepc-8Gieqc' mpiicpc -o checklink.o -c -wd1572 -O3 -fPIC -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/include -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/include -I/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/include -I/apps/rhel6/intel/impi/4.1.0.024/intel64/include -D__INSDIR__=./ checklink.c [18474 refs] mpiicpc -wd1572 -O3 -o checklink checklink.o -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetscsys -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lsuperlu_dist_3.2 -llapack -lblas -lparmetis -lmetis -lpthread -Wl,-rpath,/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -L/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -Wl,-rpath,/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -L/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/-Xlinker -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -lmpigc4 -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -limf -lsvml -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl make[1]: Leaving directory `/tmp/slepc-8Gieqc' ================================================================================ Checking ARPACK library... ====== With underscore Fortran names #include "petscksp.h" EXTERN_C_BEGIN extern int pdnaupd_(); extern int pdneupd_(); extern int pdsaupd_(); extern int pdseupd_(); EXTERN_C_END int main() { PetscInitialize(PETSC_NULL,PETSC_NULL,PETSC_NULL,PETSC_NULL); VecCreate(PETSC_NULL,PETSC_NULL); MatCreate(PETSC_NULL,PETSC_NULL); KSPCreate(PETSC_NULL,PETSC_NULL); pdnaupd_(); pdneupd_(); pdsaupd_(); pdseupd_(); return 0; } make[1]: Entering directory `/tmp/slepc-8Gieqc' mpiicpc -o checklink.o -c -wd1572 -O3 -fPIC -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/include -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/include -I/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/include -I/apps/rhel6/intel/impi/4.1.0.024/intel64/include -D__INSDIR__=./ checklink.c [18474 refs] mpiicpc -wd1572 -O3 -o checklink checklink.o -L/home/jfonseca/NEMOdevcarter/libs/ARPACK/ -L/home/jfonseca/NEMOdevcarter/libs/ARPACK/ -lparpack -larpack -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetscsys -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lsuperlu_dist_3.2 -llapack -lblas -lparmetis -lmetis -lpthread -Wl,-rpath,/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -L/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -Wl,-rpath,/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -L/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/-Xlinker -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -lmpigc4 -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -limf -lsvml -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl make[1]: Leaving directory `/tmp/slepc-8Gieqc' ================================================================================ Checking LAPACK library... === Checking all LAPACK functions... #include "petscksp.h" EXTERN_C_BEGIN extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlaev2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAEV2 #else dlaev2 #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgehrd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGEHRD #else dgehrd #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlanhs_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLANHS #else dlanhs #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlange_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLANGE #else dlange #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgetri_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGETRI #else dgetri #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrexc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTREXC #else dtrexc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrevc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTREVC #else dtrevc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgeevx_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGEEVX #else dgeevx #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dggevx_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGGEVX #else dggevx #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgelqf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGELQF #else dgelqf #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgesdd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGESDD #else dgesdd #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgexc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGEXC #else dtgexc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgevc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGEVC #else dtgevc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dpbtrf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DPBTRF #else dpbtrf #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dstedc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSTEDC #else dstedc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dhsein_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DHSEIN #else dhsein #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlarfg_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARFG #else dlarfg #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlarf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARF #else dlarf #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrsen_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTRSEN #else dtrsen #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgsen_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGSEN #else dtgsen #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorghr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGHR #else dorghr #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsyevr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYEVR #else dsyevr #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsyevd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYEVD #else dsyevd #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsytrd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYTRD #else dsytrd #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsygvd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYGVD #else dsygvd #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dormlq_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORMLQ #else dormlq #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorgqr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGQR #else dorgqr #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorgtr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGTR #else dorgtr #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dstevr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSTEVR #else dstevr #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dbdsdc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DBDSDC #else dbdsdc #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlamch_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAMCH #else dlamch #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlag2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAG2 #else dlag2 #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlasv2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLASV2 #else dlasv2 #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlartg_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARTG #else dlartg #endif (); extern int #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlaln2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLALN2 #else dlaln2 #endif (); EXTERN_C_END int main() { PetscInitialize(PETSC_NULL,PETSC_NULL,PETSC_NULL,PETSC_NULL); VecCreate(PETSC_NULL,PETSC_NULL); MatCreate(PETSC_NULL,PETSC_NULL); KSPCreate(PETSC_NULL,PETSC_NULL); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlaev2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAEV2 #else dlaev2 #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgehrd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGEHRD #else dgehrd #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlanhs_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLANHS #else dlanhs #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlange_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLANGE #else dlange #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgetri_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGETRI #else dgetri #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrexc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTREXC #else dtrexc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrevc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTREVC #else dtrevc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgeevx_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGEEVX #else dgeevx #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dggevx_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGGEVX #else dggevx #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgelqf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGELQF #else dgelqf #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dgesdd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DGESDD #else dgesdd #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgexc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGEXC #else dtgexc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgevc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGEVC #else dtgevc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dpbtrf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DPBTRF #else dpbtrf #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dstedc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSTEDC #else dstedc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dhsein_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DHSEIN #else dhsein #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlarfg_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARFG #else dlarfg #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlarf_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARF #else dlarf #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtrsen_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTRSEN #else dtrsen #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dtgsen_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DTGSEN #else dtgsen #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorghr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGHR #else dorghr #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsyevr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYEVR #else dsyevr #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsyevd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYEVD #else dsyevd #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsytrd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYTRD #else dsytrd #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dsygvd_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSYGVD #else dsygvd #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dormlq_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORMLQ #else dormlq #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorgqr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGQR #else dorgqr #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dorgtr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DORGTR #else dorgtr #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dstevr_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DSTEVR #else dstevr #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dbdsdc_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DBDSDC #else dbdsdc #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlamch_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAMCH #else dlamch #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlag2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLAG2 #else dlag2 #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlasv2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLASV2 #else dlasv2 #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlartg_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLARTG #else dlartg #endif (); #if defined(PETSC_BLASLAPACK_UNDERSCORE) dlaln2_ #elif defined(PETSC_BLASLAPACK_CAPS) || defined(PETSC_BLASLAPACK_STDCALL) DLALN2 #else dlaln2 #endif (); return 0; } make[1]: Entering directory `/tmp/slepc-8Gieqc' mpiicpc -o checklink.o -c -wd1572 -O3 -fPIC -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/include -I/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/include -I/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/include -I/apps/rhel6/intel/impi/4.1.0.024/intel64/include -D__INSDIR__=./ checklink.c [18474 refs] mpiicpc -wd1572 -O3 -o checklink checklink.o -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetscsys -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -L/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/linux/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lsuperlu_dist_3.2 -llapack -lblas -lparmetis -lmetis -lpthread -Wl,-rpath,/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -L/apps/rhel6/hdf5/1.8.10_intel-13.0.1.117/lib -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -Wl,-rpath,/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -L/apps/rhel6/intel/impi/4.1.0.024/intel64/lib -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -L/apps/rhel6/intel/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 -Wl,-rpath,/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -L/apps/rhel5/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6 -Wl,-rpath,/home/jfonseca/NEMOdevcarter/libs/petsc/build-real/-Xlinker -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -lmpigc4 -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -limf -lsvml -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl make[1]: Leaving directory `/tmp/slepc-8Gieqc' Invoking: ['/apps/rhel5/cmake-2.8.0/bin/cmake', '--trace', '--debug-output', '/home/jfonseca/NEMOdevcarter/libs/slepc/build-real', '-DCMAKE_C_COMPILER:FILEPATH=mpiicc', '-DCMAKE_C_FLAGS:STRING= -fPIC -wd1572 -O3', '-DCMAKE_Fortran_COMPILER:FILEPATH=mpiifort', '-DCMAKE_Fortran_FLAGS:STRING= -fPIC -O3', '-DCMAKE_CXX_COMPILER:FILEPATH=mpiicpc', '-DCMAKE_CXX_FLAGS:STRING= -wd1572 -O3 -fPIC', '-DCMAKE_AR=/usr/bin/ar', '-DCMAKE_RANLIB=/usr/bin/ranlib'] sh: ['/apps/rhel5/cmake-2.8.0/bin/cmake', '--trace', '--debug-output', '/home/jfonseca/NEMOdevcarter/libs/slepc/build-real', '-DCMAKE_C_COMPILER:FILEPATH=mpiicc', '-DCMAKE_C_FLAGS:STRING= -fPIC -wd1572 -O3', '-DCMAKE_Fortran_COMPILER:FILEPATH=mpiifort', '-DCMAKE_Fortran_FLAGS:STRING= -fPIC -O3', '-DCMAKE_CXX_COMPILER:FILEPATH=mpiicpc', '-DCMAKE_CXX_FLAGS:STRING= -wd1572 -O3 -fPIC', '-DCMAKE_AR=/usr/bin/ar', '-DCMAKE_RANLIB=/usr/bin/ranlib'] Executing: ['/apps/rhel5/cmake-2.8.0/bin/cmake', '--trace', '--debug-output', '/home/jfonseca/NEMOdevcarter/libs/slepc/build-real', '-DCMAKE_C_COMPILER:FILEPATH=mpiicc', '-DCMAKE_C_FLAGS:STRING= -fPIC -wd1572 -O3', '-DCMAKE_Fortran_COMPILER:FILEPATH=mpiifort', '-DCMAKE_Fortran_FLAGS:STRING= -fPIC -O3', '-DCMAKE_CXX_COMPILER:FILEPATH=mpiicpc', '-DCMAKE_CXX_FLAGS:STRING= -wd1572 -O3 -fPIC', '-DCMAKE_AR=/usr/bin/ar', '-DCMAKE_RANLIB=/usr/bin/ranlib'] sh: Running with trace output on. Running with debug output on. -- The C compiler identification is Intel Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeDetermineCCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working C compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiicc Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working C compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiicc -- works Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting C compiler ABI info Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting C compiler ABI info - done Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- The Fortran compiler identification is Intel Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeDetermineFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working Fortran compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiifort Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working Fortran compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiifort -- works Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting Fortran compiler ABI info Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting Fortran compiler ABI info - done Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Checking whether /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiifort supports Fortran 90 Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Checking whether /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiifort supports Fortran 90 -- yes Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- The CXX compiler identification is Intel Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeDetermineCXXCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working CXX compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiicpc Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Check for working CXX compiler: /apps/rhel6/intel/impi/4.1.0.024/intel64/bin/mpiicpc -- works Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting CXX compiler ABI info Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Detecting CXX compiler ABI info - done Called from: [2] /apps/rhel5/cmake-2.8.0/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/jfonseca/NEMOdevcarter/libs/slepc/build-real/CMakeLists.txt -- Configuring incomplete, errors occurred! =============================================================================== SLEPc Configuration =============================================================================== SLEPc directory: /home/jfonseca/NEMOdevcarter/libs/slepc/build-real PETSc directory: /home/jfonseca/NEMOdevcarter/libs/petsc/build-real Architecture "linux" with double precision real numbers ARPACK library flags: -L/home/jfonseca/NEMOdevcarter/libs/ARPACK/ -L/home/jfonseca/NEMOdevcarter/libs/ARPACK/ -lparpack -larpack