<div dir="ltr">I'll try it right away<br><br><div class="gmail_quote">On Fri, Aug 31, 2012 at 4:51 PM, Jed Brown <span dir="ltr"><<a href="mailto:jedbrown@mcs.anl.gov" target="_blank">jedbrown@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Can you remove pthreadclasses from your configure? If the problem is still there, it looks a bit like a misconfigured MPI. But get rid of the pthreadclasses first.<div class="HOEnZb">
<div class="h5"><br><br><div class="gmail_quote">On Fri, Aug 31, 2012 at 6:38 PM, Mohammad Mirzadeh <span dir="ltr"><<a href="mailto:mirzadeh@gmail.com" target="_blank">mirzadeh@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">hi guys,<div><br></div><div>After doing many many tests across different machine (Linux box and a Mac) and clusters (Gordon and Lonestar) I'm able to reproduce a test in which my code crashes if I use a petsc version that is compiled with intel compiler. This does not happen if I use gcc. When I use BiCGSTAB solver along with hypre's BoomerAMG, I get the following error message:</div>
<div><br></div><div><div>[0]PETSC ERROR: --------------------- Error Message ------------------------------------</div><div>[0]PETSC ERROR: Error in external library!</div><div>[0]PETSC ERROR: Error in HYPRE solver, error code 1!</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: Petsc Release Version 3.3.0, Patch 2, Fri Jul 13 15:42:00 CDT 2012 </div><div>[0]PETSC ERROR: See docs/changes/index.html for recent updates.</div>
<div>[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.</div><div>[0]PETSC ERROR: See docs/index.html for manual pages.</div><div>[0]PETSC ERROR: ------------------------------------------------------------------------</div>
<div>[0]PETSC ERROR: ./2D_cylinders on a arch-linu named <a href="http://c341-116.ls4.tacc.utexas.edu" target="_blank">c341-116.ls4.tacc.utexas.edu</a> by mmirzade Fri Aug 31 18:13:15 2012</div><div>[0]PETSC ERROR: Libraries linked from /work/02032/mmirzade/soft/petsc-3.3-p2/arch-linux-intel-debug/lib</div>
<div>[0]PETSC ERROR: Configure run at Fri Aug 31 17:22:42 2012</div><div>[0]PETSC ERROR: Configure options PETSC_ARCH=arch-linux-intel-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=/opt/apps/intel11_1/mvapich2/1.6 --with-blas-lapack-dir=/opt/apps/intel/11.1/mkl --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: PCApply_HYPRE() line 160 in src/ksp/pc/impls/hypre/hypre.c</div><div>[0]PETSC ERROR: PCApply() line 384 in src/ksp/pc/interface/precon.c</div>
<div>[0]PETSC ERROR: KSPInitialResidual() line 57 in src/ksp/ksp/interface/itres.c</div><div>[0]PETSC ERROR: KSPSolve_BCGS() line 65 in src/ksp/ksp/impls/bcgs/bcgs.c</div><div>[0]PETSC ERROR: KSPSolve() line 446 in src/ksp/ksp/interface/itfunc.c</div>
<div>[0]PETSC ERROR: solve() line 402 in "unknowndirectory/"/work/02032/mmirzade/codes/CASL/lib/algebra/petscLinearSolver.cpp</div><div>[0]PETSC ERROR: --------------------- Error Message ------------------------------------</div>
<div>[0]PETSC ERROR: Error in external library!</div><div>[0]PETSC ERROR: Error in HYPRE_IJMatrixDestroy()!</div><div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: Petsc Release Version 3.3.0, Patch 2, Fri Jul 13 15:42:00 CDT 2012 </div>
<div>[0]PETSC ERROR: See docs/changes/index.html for recent updates.</div><div>[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.</div><div>[0]PETSC ERROR: See docs/index.html for manual pages.</div><div>
[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: ./2D_cylinders on a arch-linu named <a href="http://c341-116.ls4.tacc.utexas.edu" target="_blank">c341-116.ls4.tacc.utexas.edu</a> by mmirzade Fri Aug 31 18:13:15 2012</div>
<div>[0]PETSC ERROR: Libraries linked from /work/02032/mmirzade/soft/petsc-3.3-p2/arch-linux-intel-debug/lib</div><div>[0]PETSC ERROR: Configure run at Fri Aug 31 17:22:42 2012</div><div>[0]PETSC ERROR: Configure options PETSC_ARCH=arch-linux-intel-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=/opt/apps/intel11_1/mvapich2/1.6 --with-blas-lapack-dir=/opt/apps/intel/11.1/mkl --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: PCDestroy_HYPRE() line 178 in src/ksp/pc/impls/hypre/hypre.c</div><div>[0]PETSC ERROR: PCDestroy() line 119 in src/ksp/pc/interface/precon.c</div>
<div>[0]PETSC ERROR: KSPDestroy() line 786 in src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: clear() line 438 in "unknowndirectory/"/work/02032/mmirzade/codes/CASL/lib/algebra/petscLinearSolver.cpp</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range</div><div>
[0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger</div>
<div>[0]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind[0]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind[0]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors</div>
<div>[0]PETSC ERROR: likely location of problem given in stack below</div><div>[0]PETSC ERROR: --------------------- Stack Frames ------------------------------------</div><div>[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,</div>
<div>[0]PETSC ERROR: INSTEAD the line number of the start of the function</div><div>[0]PETSC ERROR: is given.</div><div>[0]PETSC ERROR: [0] VecDestroy line 574 src/vec/vec/interface/vector.c</div><div>[0]PETSC ERROR: [0] KSPReset_BCGS line 194 src/ksp/ksp/impls/bcgs/bcgs.c</div>
<div>[0]PETSC ERROR: [0] KSPReset line 729 src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: [0] KSPDestroy line 768 src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: [0] PetscError line 343 src/sys/error/err.c</div>
<div>[0]PETSC ERROR: [0] HYPRE_IJMatrixDestroy line 0 unknownunknown</div><div>[0]PETSC ERROR: [0] PCDestroy_HYPRE line 177 src/ksp/pc/impls/hypre/hypre.c</div><div>[0]PETSC ERROR: [0] PCDestroy line 110 src/ksp/pc/interface/precon.c</div>
<div>[0]PETSC ERROR: [0] KSPDestroy line 768 src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: [0] PetscError line 343 src/sys/error/err.c</div><div>[0]PETSC ERROR: [0] PCApply_HYPRE line 149 src/ksp/pc/impls/hypre/hypre.c</div>
<div>[0]PETSC ERROR: [0] PCApply line 373 src/ksp/pc/interface/precon.c</div><div>[0]PETSC ERROR: [0] KSPInitialResidual line 45 src/ksp/ksp/interface/itres.c</div><div>[0]PETSC ERROR: [0] KSPSolve_BCGS line 54 src/ksp/ksp/impls/bcgs/bcgs.c</div>
<div>[0]PETSC ERROR: [0] KSPSolve line 351 src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: --------------------- Error Message ------------------------------------</div><div>[0]PETSC ERROR: Signal received!</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: Petsc Release Version 3.3.0, Patch 2, Fri Jul 13 15:42:00 CDT 2012 </div><div>[0]PETSC ERROR: See docs/changes/index.html for recent updates.</div>
<div>[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.</div><div>[0]PETSC ERROR: See docs/index.html for manual pages.</div><div>[0]PETSC ERROR: ------------------------------------------------------------------------</div>
<div>[0]PETSC ERROR: ./2D_cylinders on a arch-linu named <a href="http://c341-116.ls4.tacc.utexas.edu" target="_blank">c341-116.ls4.tacc.utexas.edu</a> by mmirzade Fri Aug 31 18:13:15 2012</div><div>[0]PETSC ERROR: Libraries linked from /work/02032/mmirzade/soft/petsc-3.3-p2/arch-linux-intel-debug/lib</div>
<div>[0]PETSC ERROR: Configure run at Fri Aug 31 17:22:42 2012</div><div>[0]PETSC ERROR: Configure options PETSC_ARCH=arch-linux-intel-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=/opt/apps/intel11_1/mvapich2/1.6 --with-blas-lapack-dir=/opt/apps/intel/11.1/mkl --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: User provided function() line 0 in unknown directory unknown file</div><div>application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0</div>
</div><div><br></div><div><br></div><div>Initially I thought this is somehow related to hypre, but even when I run the code with -pc_type none I get:</div><div><br></div><div><div>[0]PETSC ERROR: --------------------- Error Message ------------------------------------</div>
<div>[0]PETSC ERROR: Floating point exception!</div><div>[0]PETSC ERROR: Infinite or not-a-number generated in norm!</div><div>[0]PETSC ERROR: ------------------------------------------------------------------------</div>
<div>[0]PETSC ERROR: Petsc Release Version 3.3.0, Patch 2, Fri Jul 13 15:42:00 CDT 2012 </div><div>[0]PETSC ERROR: See docs/changes/index.html for recent updates.</div><div>[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.</div>
<div>[0]PETSC ERROR: See docs/index.html for manual pages.</div><div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: ./2D_cylinders on a arch-linu named <a href="http://c341-116.ls4.tacc.utexas.edu" target="_blank">c341-116.ls4.tacc.utexas.edu</a> by mmirzade Fri Aug 31 18:15:04 2012</div>
<div>[0]PETSC ERROR: Libraries linked from /work/02032/mmirzade/soft/petsc-3.3-p2/arch-linux-intel-debug/lib</div><div>[0]PETSC ERROR: Configure run at Fri Aug 31 17:22:42 2012</div><div>[0]PETSC ERROR: Configure options PETSC_ARCH=arch-linux-intel-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=/opt/apps/intel11_1/mvapich2/1.6 --with-blas-lapack-dir=/opt/apps/intel/11.1/mkl --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
<div>[0]PETSC ERROR: ------------------------------------------------------------------------</div><div>[0]PETSC ERROR: VecNorm() line 169 in src/vec/vec/interface/rvector.c</div><div>[0]PETSC ERROR: KSPSolve_BCGS() line 78 in src/ksp/ksp/impls/bcgs/bcgs.c</div>
<div>[0]PETSC ERROR: KSPSolve() line 446 in src/ksp/ksp/interface/itfunc.c</div><div>[0]PETSC ERROR: solve() line 402 in "unknowndirectory/"/work/02032/mmirzade/codes/CASL/lib/algebra/petscLinearSolver.cpp</div>
<div>N5PETSc9ExceptionE</div></div><div><br></div><div><br></div><div>In both cases the solution to the linear system diverges. None of these issues happen when I build petsc with gcc. </div><div><br></div><div>Couple of points:</div>
<div><br></div><div>1) The gcc version is clean under valgrind (except the usual PetscInitialize errors ...) but the intel versions generates all sort of errors in valgrind. Please see blow (this is during one Poisson solve)</div>
<div>2) This is my petsc configure option:</div><div><br></div><div><div>/configure PETSC_ARCH=arch-linux-gcc-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=$MPICH_HOME --with-blas-lapack-dir=$TACC_MKL_DIR --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
</div><div><br></div><div><div>./configure PETSC_ARCH=arch-linux-intel-debug --with-clanguage=cxx --with-pthreadclasses=1 --with-mpi-dir=$MPICH_HOME --with-blas-lapack-dir=$TACC_MKL_DIR --download-hypre=1 --download-hdf5=1 --download-metis=1 --download-parmetis=1 --download-superlu_dist=1</div>
</div><div><br></div><div><br></div><div>in both cases $TACC_MKL_DIR points to a mkl library compiled using intel compiler. I don't think if that has to do with any of this (looking at valgrind output) but then again that's the only version of mkl available on the cluster (Lonestar).</div>
<div><br></div><div>Do you think this is somehow a compiler bug(?) or something more like an undefined behavior in my own code?</div><div><br></div><div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74B236A: calloc (mvapich_malloc.c:3756)</div><div>==8404== by 0x747D79D: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div><div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div>
<div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div><div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div><div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div>
<div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div><div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div><div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div>
<div>==8404== by 0x40D464: main (main_2D_cylinders.cpp:299)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74B21CD: calloc (mvapich_malloc.c:3825)</div>
<div>==8404== by 0x747D79D: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div><div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div><div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div>
<div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div><div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div><div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div>
<div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div><div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div>
<div>==8404== by 0x40D464: main (main_2D_cylinders.cpp:299)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x8283154: __intel_new_memset (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div>
<div>==8404== by 0x8261535: _intel_fast_memset.J (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x74B221A: calloc (mvapich_malloc.c:3826)</div><div>==8404== by 0x747D79D: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div>
<div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div><div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div><div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div>
<div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div><div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div><div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div>
<div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74B236A: calloc (mvapich_malloc.c:3756)</div>
<div>==8404== by 0x747D714: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div><div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div><div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div>
<div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div><div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div><div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div>
<div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div><div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div>
<div>==8404== by 0x40D464: main (main_2D_cylinders.cpp:299)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74B21CD: calloc (mvapich_malloc.c:3825)</div>
<div>==8404== by 0x747D714: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div><div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div><div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div>
<div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div><div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div><div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div>
<div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div><div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div>
<div>==8404== by 0x40D464: main (main_2D_cylinders.cpp:299)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x8283136: __intel_new_memset (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div>
<div>==8404== by 0x8261535: _intel_fast_memset.J (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x74B221A: calloc (mvapich_malloc.c:3826)</div><div>==8404== by 0x747D714: MPIU_Handle_obj_alloc_unsafe (handlemem.c:363)</div>
<div>==8404== by 0x747D665: MPIU_Handle_obj_alloc (handlemem.c:307)</div><div>==8404== by 0x744F596: MPIR_Comm_create (commutil.c:101)</div><div>==8404== by 0x744E84D: MPIR_Comm_copy (commutil.c:969)</div><div>==8404== by 0x7447F14: PMPI_Comm_dup (comm_dup.c:177)</div>
<div>==8404== by 0xB2292A: PCCreate_HYPRE (hypre.c:1018)</div><div>==8404== by 0xA64120: PCSetType(_p_PC*, char const*) (pcset.c:83)</div><div>==8404== by 0x46B3FE: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:331)</div>
<div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74B236A: calloc (mvapich_malloc.c:3756)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x14E6385: hypre_BoomerAMGCreate (par_amg.c:203)</div><div>==8404== by 0x14E2E10: HYPRE_BoomerAMGCreate (HYPRE_parcsr_amg.c:31)</div>
<div>==8404== by 0xB1C33B: PCHYPRESetType_HYPRE (hypre.c:817)</div><div>==8404== by 0xB2117F: PCSetFromOptions_HYPRE(_p_PC*) (hypre.c:895)</div><div>==8404== by 0xA65705: PCSetFromOptions(_p_PC*) (pcset.c:196)</div>
<div>==8404== by 0x46B487: PetscLinearSolver::setupSolver(MatStructure, char const*, char const*) (petscLinearSolver.cpp:332)</div><div>==8404== by 0x46E7D1: amr2D::fvm::pnpSolver::initialize() (pnpSolver_2d_FVM.cpp:46)</div>
<div>==8404== by 0x40D464: main (main_2D_cylinders.cpp:299)</div><div>==8404== </div><div>Solving a nonlinear PB to get steady state solution ... </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74B21CD: calloc (mvapich_malloc.c:3825)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x14DB097: hypre_IJMatrixSetDiagOffdSizesParCSR (IJMatrix_parcsr.c:179)</div>
<div>==8404== by 0x14D97C9: HYPRE_IJMatrixSetDiagOffdSizes (HYPRE_IJMatrix.c:818)</div><div>==8404== by 0x11A2728: MatHYPRE_IJMatrixPreallocate(_p_Mat*, _p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:48)</div><div>==8404== by 0x11A3E9C: MatHYPRE_IJMatrixCreate(_p_Mat*, hypre_IJMatrix_struct**) (mhyp.c:80)</div>
<div>==8404== by 0xAFDA92: PCSetUp_HYPRE(_p_PC*) (hypre.c:100)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74AECA4: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div>
<div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== </div><div>==8404== Syscall param mmap(length) contains uninitialised byte(s)</div><div>==8404== at 0x3E3CED10EA: mmap (in /lib64/<a href="http://libc-2.5.so" target="_blank">libc-2.5.so</a>)</div><div>==8404== by 0x74AECD1: _int_malloc (mvapich_malloc.c:4332)</div>
<div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div>
<div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74AEA3E: _int_malloc (mvapich_malloc.c:4332)</div>
<div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div>
<div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74AEA70: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div>
<div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AEA8A: _int_malloc (mvapich_malloc.c:4332)</div>
<div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div>
<div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74AEA98: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div>
<div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74AD6E6: _int_free (mvapich_malloc.c:4366)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74AD723: _int_free (mvapich_malloc.c:4389)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74AD755: _int_free (mvapich_malloc.c:4400)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74AD75B: _int_free (mvapich_malloc.c:4402)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74AD77E: _int_free (mvapich_malloc.c:4409)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74AD7A9: _int_free (mvapich_malloc.c:4425)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74AD7B4: _int_free (mvapich_malloc.c:4455)</div><div>==8404== by 0x74AEAA8: _int_malloc (mvapich_malloc.c:4332)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div>
<div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div><div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div>
<div>==8404== by 0x5FA4BA: VecCreate_Seq (bvec3.c:40)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADDAE: _int_malloc (mvapich_malloc.c:4116)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADDD9: _int_malloc (mvapich_malloc.c:4122)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADDEC: _int_malloc (mvapich_malloc.c:4122)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADDFF: _int_malloc (mvapich_malloc.c:4122)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74ADE42: _int_malloc (mvapich_malloc.c:4124)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADE4C: _int_malloc (mvapich_malloc.c:4126)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74ADE88: _int_malloc (mvapich_malloc.c:4148)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74ADE9C: _int_malloc (mvapich_malloc.c:4152)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF56: _int_malloc (mvapich_malloc.c:4220)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF72: _int_malloc (mvapich_malloc.c:4227)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF7E: _int_malloc (mvapich_malloc.c:4227)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0x5E9616: VecCreate_Seq_Private(_p_Vec*, double const*) (bvec2.c:887)</div>
<div>==8404== by 0x5FA62A: VecCreate_Seq (bvec3.c:42)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div><div>==8404== by 0x614EA3: VecCreate_Standard (pbvec.c:264)</div><div>==8404== by 0x5B36DC: VecSetType(_p_Vec*, char const*) (vecreg.c:53)</div>
<div>==8404== by 0x703809: MatGetVecs(_p_Mat*, _p_Vec**, _p_Vec**) (matrix.c:8149)</div><div>==8404== by 0xAFDB5E: PCSetUp_HYPRE(_p_PC*) (hypre.c:104)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADED9: _int_malloc (mvapich_malloc.c:4168)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B62C5: hypre_SeqVectorInitialize (vector.c:94)</div>
<div>==8404== by 0x158CF25: hypre_ParVectorInitialize (par_vector.c:150)</div><div>==8404== by 0x14E0E57: hypre_IJVectorInitializePar (IJVector_parcsr.c:124)</div><div>==8404== by 0x14DA2B9: HYPRE_IJVectorInitialize (HYPRE_IJVector.c:229)</div>
<div>==8404== by 0xE77A78: VecHYPRE_IJVectorCreate(_p_Vec*, hypre_IJVector_struct**) (vhyp.c:21)</div><div>==8404== by 0xAFDC0C: PCSetUp_HYPRE(_p_PC*) (hypre.c:105)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADEE6: _int_malloc (mvapich_malloc.c:4165)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B62C5: hypre_SeqVectorInitialize (vector.c:94)</div>
<div>==8404== by 0x158CF25: hypre_ParVectorInitialize (par_vector.c:150)</div><div>==8404== by 0x14E0E57: hypre_IJVectorInitializePar (IJVector_parcsr.c:124)</div><div>==8404== by 0x14DA2B9: HYPRE_IJVectorInitialize (HYPRE_IJVector.c:229)</div>
<div>==8404== by 0xE77A78: VecHYPRE_IJVectorCreate(_p_Vec*, hypre_IJVector_struct**) (vhyp.c:21)</div><div>==8404== by 0xAFDC0C: PCSetUp_HYPRE(_p_PC*) (hypre.c:105)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF31: _int_malloc (mvapich_malloc.c:4216)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B62C5: hypre_SeqVectorInitialize (vector.c:94)</div>
<div>==8404== by 0x158CF25: hypre_ParVectorInitialize (par_vector.c:150)</div><div>==8404== by 0x14E0E57: hypre_IJVectorInitializePar (IJVector_parcsr.c:124)</div><div>==8404== by 0x14DA2B9: HYPRE_IJVectorInitialize (HYPRE_IJVector.c:229)</div>
<div>==8404== by 0xE77A78: VecHYPRE_IJVectorCreate(_p_Vec*, hypre_IJVector_struct**) (vhyp.c:21)</div><div>==8404== by 0xAFDC0C: PCSetUp_HYPRE(_p_PC*) (hypre.c:105)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x74AD75B: _int_free (mvapich_malloc.c:4402)</div><div>==8404== by 0x74AF651: free (mvapich_malloc.c:3497)</div><div>==8404== by 0x494CCA: PetscFreeAlign(void*, int, char const*, char const*, char const*) (mal.c:75)</div>
<div>==8404== by 0x497F91: PetscTrFreeDefault(void*, int, char const*, char const*, char const*) (mtr.c:322)</div><div>==8404== by 0x5E866E: VecDestroy_Seq(_p_Vec*) (bvec2.c:777)</div><div>==8404== by 0x59F7CD: VecDestroy(_p_Vec**) (vector.c:580)</div>
<div>==8404== by 0xAFDD5D: PCSetUp_HYPRE(_p_PC*) (hypre.c:107)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AD775: _int_free (mvapich_malloc.c:4406)</div><div>==8404== by 0x74AF651: free (mvapich_malloc.c:3497)</div><div>==8404== by 0x494CCA: PetscFreeAlign(void*, int, char const*, char const*, char const*) (mal.c:75)</div>
<div>==8404== by 0x497F91: PetscTrFreeDefault(void*, int, char const*, char const*, char const*) (mtr.c:322)</div><div>==8404== by 0x5E866E: VecDestroy_Seq(_p_Vec*) (bvec2.c:777)</div><div>==8404== by 0x59F7CD: VecDestroy(_p_Vec**) (vector.c:580)</div>
<div>==8404== by 0xAFDD5D: PCSetUp_HYPRE(_p_PC*) (hypre.c:107)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AD7A9: _int_free (mvapich_malloc.c:4425)</div><div>==8404== by 0x74AF651: free (mvapich_malloc.c:3497)</div><div>==8404== by 0x494CCA: PetscFreeAlign(void*, int, char const*, char const*, char const*) (mal.c:75)</div>
<div>==8404== by 0x497F91: PetscTrFreeDefault(void*, int, char const*, char const*, char const*) (mtr.c:322)</div><div>==8404== by 0x5E866E: VecDestroy_Seq(_p_Vec*) (bvec2.c:777)</div><div>==8404== by 0x59F7CD: VecDestroy(_p_Vec**) (vector.c:580)</div>
<div>==8404== by 0xAFDD5D: PCSetUp_HYPRE(_p_PC*) (hypre.c:107)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADDA1: _int_malloc (mvapich_malloc.c:4106)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADDAE: _int_malloc (mvapich_malloc.c:4116)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>
==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div>
<div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>
==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADDD9: _int_malloc (mvapich_malloc.c:4122)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADDEC: _int_malloc (mvapich_malloc.c:4122)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>
==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div>
<div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>
==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADDFF: _int_malloc (mvapich_malloc.c:4122)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADE12: _int_malloc (mvapich_malloc.c:4122)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>
==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div>
<div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>
==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74ADE42: _int_malloc (mvapich_malloc.c:4124)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div>
<div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div>
<div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div>
<div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADE4C: _int_malloc (mvapich_malloc.c:4126)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74ADE88: _int_malloc (mvapich_malloc.c:4148)</div><div>
==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74ADE9C: _int_malloc (mvapich_malloc.c:4152)</div><div>
==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3AA1: hypre_CSRMatrixInitialize (csr_matrix.c:91)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AE1E7: _int_malloc (mvapich_malloc.c:4170)</div><div>
==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3B06: hypre_CSRMatrixInitialize (csr_matrix.c:97)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div>
<div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div>
<div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div>
<div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74AE1EF: _int_malloc (mvapich_malloc.c:4173)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B3B06: hypre_CSRMatrixInitialize (csr_matrix.c:97)</div><div>
==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div><div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div>
<div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div><div>
==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AE266: _int_malloc (mvapich_malloc.c:4188)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div>
<div>==8404== by 0x15B3B06: hypre_CSRMatrixInitialize (csr_matrix.c:97)</div><div>==8404== by 0x158732D: hypre_ParCSRMatrixInitialize (par_csr_matrix.c:200)</div><div>==8404== by 0x14DB366: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:272)</div>
<div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div>
<div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== </div>
<div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADF87: _int_malloc (mvapich_malloc.c:4237)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x1626536: hypre_AuxParCSRMatrixInitialize (aux_parcsr_matrix.c:177)</div><div>==8404== by 0x14DB372: hypre_IJMatrixInitializeParCSR (IJMatrix_parcsr.c:273)</div>
<div>==8404== by 0x14D8D44: HYPRE_IJMatrixInitialize (HYPRE_IJMatrix.c:303)</div><div>==8404== by 0x11A7FFF: MatHYPRE_IJMatrixFastCopy_MPIAIJ(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:211)</div><div>==8404== by 0x11A4BFD: MatHYPRE_IJMatrixCopy(_p_Mat*, hypre_IJMatrix_struct*) (mhyp.c:122)</div>
<div>==8404== by 0xAFE3DC: PCSetUp_HYPRE(_p_PC*) (hypre.c:118)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADECC: _int_malloc (mvapich_malloc.c:4165)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x15B62C5: hypre_SeqVectorInitialize (vector.c:94)</div><div>==8404== by 0x158CF25: hypre_ParVectorInitialize (par_vector.c:150)</div>
<div>==8404== by 0x14ECF47: hypre_BoomerAMGSetup (par_amg_setup.c:464)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF72: _int_malloc (mvapich_malloc.c:4227)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x14FC3F9: hypre_BoomerAMGCoarsenRuge (par_coarsen.c:940)</div>
<div>==8404== by 0x14FF1EE: hypre_BoomerAMGCoarsenFalgout (par_coarsen.c:1918)</div><div>==8404== by 0x14EDE45: hypre_BoomerAMGSetup (par_amg_setup.c:758)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div>
<div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADF7E: _int_malloc (mvapich_malloc.c:4227)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x14FC3F9: hypre_BoomerAMGCoarsenRuge (par_coarsen.c:940)</div>
<div>==8404== by 0x14FF1EE: hypre_BoomerAMGCoarsenFalgout (par_coarsen.c:1918)</div><div>==8404== by 0x14EDE45: hypre_BoomerAMGSetup (par_amg_setup.c:758)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div>
<div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AE293: _int_malloc (mvapich_malloc.c:4254)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153D557: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1012)</div>
<div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74AE29B: _int_malloc (mvapich_malloc.c:4257)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153D557: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1012)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div>
<div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AE327: _int_malloc (mvapich_malloc.c:4278)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153D557: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1012)</div>
<div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74ADE4E: _int_malloc (mvapich_malloc.c:4129)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div>
<div>==8404== by 0x153DAD9: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1122)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div>
<div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADE56: _int_malloc (mvapich_malloc.c:4129)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153DAD9: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1122)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div>
<div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74ADE98: _int_malloc (mvapich_malloc.c:4151)</div>
<div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153DAD9: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1122)</div>
<div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AD771: _int_free (mvapich_malloc.c:4406)</div><div>==8404== by 0x74AF651: free (mvapich_malloc.c:3497)</div><div>==8404== by 0x16240BA: hypre_Free (hypre_memory.c:196)</div>
<div>==8404== by 0x153F2EA: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1685)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div>
<div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== by 0x472A92: amr2D::fvm::pbSolver::SolveNonLinearPB(double, int) (pbSolver_2d_FVM.cpp:148)</div>
<div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div><div>==8404== at 0x74ADF56: _int_malloc (mvapich_malloc.c:4220)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x1586F83: hypre_ParCSRMatrixCreate (par_csr_matrix.c:60)</div><div>==8404== by 0x1554BE0: hypre_BoomerAMGCreateS (par_strength.c:156)</div>
<div>==8404== by 0x14EDD1B: hypre_BoomerAMGSetup (par_amg_setup.c:736)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x828313B: __intel_new_memset (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div>
<div>==8404== by 0x8261535: _intel_fast_memset.J (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x74B221A: calloc (mvapich_malloc.c:3826)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div>
<div>==8404== by 0x14FC57D: hypre_BoomerAMGCoarsenRuge (par_coarsen.c:988)</div><div>==8404== by 0x14FF1EE: hypre_BoomerAMGCoarsenFalgout (par_coarsen.c:1918)</div><div>==8404== by 0x14EDE45: hypre_BoomerAMGSetup (par_amg_setup.c:758)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div>
<div>==8404== at 0x8283145: __intel_new_memset (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x8261535: _intel_fast_memset.J (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x74B221A: calloc (mvapich_malloc.c:3826)</div>
<div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153E2B7: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1354)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AE1F1: _int_malloc (mvapich_malloc.c:4174)</div><div>==8404== by 0x74B2189: calloc (mvapich_malloc.c:3765)</div><div>
==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div>
<div>==8404== by 0x15B3457: hypre_CSRMatrixTranspose (csr_matop.c:354)</div><div>==8404== by 0x153B7B8: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:372)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x74AD77E: _int_free (mvapich_malloc.c:4409)</div><div>==8404== by 0x74AF651: free (mvapich_malloc.c:3497)</div><div>==8404== by 0x16240BA: hypre_Free (hypre_memory.c:196)</div>
<div>==8404== by 0x15B3A2F: hypre_CSRMatrixDestroy (csr_matrix.c:69)</div><div>==8404== by 0x153F6C2: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1767)</div><div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div>
<div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div><div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>
==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div><div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div>
<div>==8404== </div><div>==8404== Use of uninitialised value of size 8</div><div>==8404== at 0x8283131: __intel_new_memset (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div><div>==8404== by 0x8261535: _intel_fast_memset.J (in /opt/apps/intel/11.1/lib/intel64/libirc.so)</div>
<div>==8404== by 0x74B221A: calloc (mvapich_malloc.c:3826)</div><div>==8404== by 0x1623FF2: hypre_CAlloc (hypre_memory.c:121)</div><div>==8404== by 0x153E2DD: hypre_BoomerAMGBuildCoarseOperator (par_rap.c:1355)</div>
<div>==8404== by 0x14F1CCB: hypre_BoomerAMGSetup (par_amg_setup.c:1650)</div><div>==8404== by 0x14E2EA6: HYPRE_BoomerAMGSetup (HYPRE_parcsr_amg.c:58)</div><div>==8404== by 0xAFF31D: PCSetUp_HYPRE(_p_PC*) (hypre.c:122)</div>
<div>==8404== by 0x12293CE: PCSetUp(_p_PC*) (precon.c:832)</div><div>==8404== by 0xC1D524: KSPSetUp(_p_KSP*) (itfunc.c:278)</div><div>==8404== by 0xC1EFD9: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:402)</div>
<div>==8404== by 0x46C59F: PetscLinearSolver::solve(ArrayV<double>&, PetscBool) (petscLinearSolver.cpp:402)</div><div>==8404== </div><div>==8404== Conditional jump or move depends on uninitialised value(s)</div>
<div>==8404== at 0x74ADED9: _int_malloc (mvapich_malloc.c:4168)</div><div>==8404== by 0x74AEE8D: malloc (mvapich_malloc.c:3409)</div><div>==8404== by 0x74AFB0F: memalign (mvapich_malloc.c:3626)</div><div>==8404== by 0x494BF3: PetscMallocAlign(unsigned long, int, char const*, char const*, char const*, void**) (mal.c:30)</div>
<div>==8404== by 0x496DFD: PetscTrMallocDefault(unsigned long, int, char const*, char const*, char const*, void**) (mtr.c:190)</div><div>==8404== by 0xE71ECC: VecStashCreate_Private(int, int, VecStash*) (vecstash.c:37)</div>
<div>==8404== by 0x6145A1: VecCreate_MPI_Private(_p_Vec*, PetscBool, int, double const*) (pbvec.c:207)</div><div>==8404== by 0x613475: VecDuplicate_MPI(_p_Vec*, _p_Vec**) (pbvec.c:70)</div><div>==8404== by 0x59EF10: VecDuplicate(_p_Vec*, _p_Vec**) (vector.c:551)</div>
<div>==8404== by 0xC4F687: KSPDefaultConverged(_p_KSP*, int, double, KSPConvergedReason*, void*) (iterativ.c:585)</div><div>==8404== by 0xC6CB92: KSPSolve_BCGS(_p_KSP*) (bcgs.c:86)</div><div>==8404== by 0xC1FC32: KSPSolve(_p_KSP*, _p_Vec*, _p_Vec*) (itfunc.c:446)</div>
<div>==8404== </div></div><div><br></div><div><br></div><div><br></div><div><br></div></div>
</blockquote></div><br>
</div></div></blockquote></div><br></div>