On Sun, Nov 27, 2011 at 2:04 PM, Rongliang Chen <span dir="ltr"><<a href="mailto:rongliang.chan@gmail.com">rongliang.chan@gmail.com</a>></span> wrote:<br><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
Hi Jed,<br><br>Thank you for your reply.<br>I have no idea if I have passed a invalid graph to Metis.<br>This error just appeared when I run my code with some number of processors. <br>I run my code with the debug version of PETSc and I got the following error message.<br>
</blockquote><div><br></div><div>This is a SuperLU problem. Please send configure.log to <a href="mailto:petsc-maint@mcs.anl.gov">petsc-maint@mcs.anl.gov</a></div><div><br></div><div>Jed, could this be the mismatch between SuperLU and the new ParMetis?</div>
<div><br></div><div> Matt</div><div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">Best,<br>Rongliang<br><br>------------------------------------------------------<br>
***ASSERTION failed on line 169 of file ccgraph.c: cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt)<br>0 107 106 107 0<br>[313]PETSC ERROR: ------------------------------------------------------------------------<br>
[313]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range<br>[313]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>[313]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[313]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[313]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors<br>
[313]PETSC ERROR: likely location of problem given in stack below<br>[313]PETSC ERROR: --------------------- Stack Frames ------------------------------------<br>***ASSERTION failed on line 169 of file ccgraph.c: cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt)<br>
0 107 106 107 0<br>[313]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,<br>[313]PETSC ERROR: INSTEAD the line number of the start of the function<br>[313]PETSC ERROR: is given.<br>[313]PETSC ERROR: [313] MatLUFactorNumeric_SuperLU_DIST line 280 src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c<br>
[313]PETSC ERROR: [313] MatLUFactorNumeric line 2864 src/mat/interface/matrix.c<br>[313]PETSC ERROR: [313] PCApply line 373 src/ksp/pc/interface/precon.c<br>[313]PETSC ERROR: [313] FGMREScycle line 119 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>
[313]PETSC ERROR: [313] KSPSolve_FGMRES line 282 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>[313]PETSC ERROR: [313] KSPSolve line 331 src/ksp/ksp/interface/itfunc.c<br>[313]PETSC ERROR: [313] SNES_KSPSolve line 3394 src/snes/interface/snes.c<br>
[313]PETSC ERROR: [313] SNESSolve_LS line 142 src/snes/impls/ls/ls.c<br>[401]PETSC ERROR: ------------------------------------------------------------------------<br>[401]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range<br>
[401]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>[401]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[401]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[401]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors<br>
[401]PETSC ERROR: likely location of problem given in stack below<br>[401]PETSC ERROR: --------------------- Stack Frames ------------------------------------<br>[313]PETSC ERROR: [313] SNESSolve line 2647 src/snes/interface/snes.c<br>
[313]PETSC ERROR: [313] TimeStep line 1554 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[313]PETSC ERROR: [313] SolveSteadyState line 1429 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[313]PETSC ERROR: [313] ComputefixedBoundary line 588 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>--------------------------------------------------------------------------<br>MPI_ABORT was invoked on rank 313 in communicator MPI_COMM_WORLD <br>
with errorcode 59.<br><br>NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.<br>You may or may not see output from other processes, depending on<br>exactly when Open MPI kills them.<br>--------------------------------------------------------------------------<br>
[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[313]PETSC ERROR: [313] SetReferenceElement line 424 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[313]PETSC ERROR: --------------------- Error Message ------------------------------------<br>[313]PETSC ERROR: Signal received!<br>[313]PETSC ERROR: ------------------------------------------------------------------------<br>
[313]PETSC ERROR: Petsc Release Version 3.2.0, Patch 1, Mon Sep 12 16:01:51 CDT 2011 <br>[313]PETSC ERROR: See docs/changes/index.html for recent updates.<br>[313]PETSC ERROR: See docs/faq.html for hints about trouble shooting.<br>
[313]PETSC ERROR: See docs/index.html for manual pages.<br>[313]PETSC ERROR: ------------------------------------------------------------------------<br>[313]PETSC ERROR: ./joab on a Janus-deb named node1739 by ronglian Sun Nov 27 12:50:41 2011<br>
[313]PETSC ERROR: Libraries linked from /home/ronglian/soft/petsc-3.2-p1/Janus-debug/lib<br>[313]PETSC ERROR: Configure run at Tue Sep 13 18:32:21 2011<br>[313]PETSC ERROR: Configure options --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=8 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --with-batch=1 --with-mpi-shared-libraries=1 --known-mpi-shared-libraries=0 --download-f-blas-lapack=1 --download-hypre=1 --download-superlu=1 --download-parmetis=1 --download-superlu_dist=1 --download-blacs=1 --download-scalapack=1 --with-debugging=1<br>
[313]PETSC ERROR: ------------------------------------------------------------------------<br>[313]PETSC ERROR: User provided function() line 0 in unknown directory unknown file<br>[401]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,<br>
[401]PETSC ERROR: INSTEAD the line number of the start of the function<br>[401]PETSC ERROR: is given.<br>[401]PETSC ERROR: [401] MatLUFactorNumeric_SuperLU_DIST line 280 src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c<br>
[401]PETSC ERROR: [401] MatLUFactorNumeric line 2864 src/mat/interface/matrix.c<br>[401]PETSC ERROR: [401] PCApply line 373 src/ksp/pc/interface/precon.c<br>[401]PETSC ERROR: [401] FGMREScycle line 119 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>
[401]PETSC ERROR: [401] KSPSolve_FGMRES line 282 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>[401]PETSC ERROR: [401] KSPSolve line 331 src/ksp/ksp/interface/itfunc.c<br>[401]PETSC ERROR: [401] SNES_KSPSolve line 3394 src/snes/interface/snes.c<br>
[401]PETSC ERROR: [401] SNESSolve_LS line 142 src/snes/impls/ls/ls.c<br>[401]PETSC ERROR: [401] SNESSolve line 2647 src/snes/interface/snes.c<br>[401]PETSC ERROR: [401] TimeStep line 1554 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[401]PETSC ERROR: [401] SolveSteadyState line 1429 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[401]PETSC ERROR: [401] ComputefixedBoundary line 588 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: [401] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[401]PETSC ERROR: [401] SetReferenceElement line 424 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[401]PETSC ERROR: --------------------- Error Message ------------------------------------<br>[401]PETSC ERROR: Signal received!<br>
[401]PETSC ERROR: ------------------------------------------------------------------------<br>[401]PETSC ERROR: Petsc Release Version 3.2.0, Patch 1, Mon Sep 12 16:01:51 CDT 2011 <br>[401]PETSC ERROR: See docs/changes/index.html for recent updates.<br>
[401]PETSC ERROR: See docs/faq.html for hints about trouble shooting.<br>[401]PETSC ERROR: See docs/index.html for manual pages.<br>[401]PETSC ERROR: ------------------------------------------------------------------------<br>
[401]PETSC ERROR: ./joab on a Janus-deb named node1708 by ronglian Sun Nov 27 12:50:41 2011<br>[401]PETSC ERROR: Libraries linked from /home/ronglian/soft/petsc-3.2-p1/Janus-debug/lib<br>[401]PETSC ERROR: Configure run at Tue Sep 13 18:32:21 2011<br>
[401]PETSC ERROR: Configure options --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=8 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --with-batch=1 --with-mpi-shared-libraries=1 --known-mpi-shared-libraries=0 --download-f-blas-lapack=1 --download-hypre=1 --download-superlu=1 --download-parmetis=1 --download-superlu_dist=1 --download-blacs=1 --download-scalapack=1 --with-debugging=1<br>
[401]PETSC ERROR: ------------------------------------------------------------------------<br>[401]PETSC ERROR: User provided function() line 0 in unknown directory unknown file<br>***ASSERTION failed on line 169 of file ccgraph.c: cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt)<br>
0 107 106 107 0<br>[511]PETSC ERROR: ------------------------------------------------------------------------<br>[511]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range<br>
[511]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>[511]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[511]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[511]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors<br>
[511]PETSC ERROR: likely location of problem given in stack below<br>[511]PETSC ERROR: --------------------- Stack Frames ------------------------------------<br>[511]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,<br>
[511]PETSC ERROR: INSTEAD the line number of the start of the function<br>[511]PETSC ERROR: is given.<br>[511]PETSC ERROR: [511] MatLUFactorNumeric_SuperLU_DIST line 280 src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c<br>
[511]PETSC ERROR: [511] MatLUFactorNumeric line 2864 src/mat/interface/matrix.c<br>[511]PETSC ERROR: [511] PCApply line 373 src/ksp/pc/interface/precon.c<br>[511]PETSC ERROR: [511] FGMREScycle line 119 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>
[511]PETSC ERROR: [511] KSPSolve_FGMRES line 282 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>[511]PETSC ERROR: [511] KSPSolve line 331 src/ksp/ksp/interface/itfunc.c<br>[511]PETSC ERROR: [511] SNES_KSPSolve line 3394 src/snes/interface/snes.c<br>
[511]PETSC ERROR: [511] SNESSolve_LS line 142 src/snes/impls/ls/ls.c<br>[511]PETSC ERROR: [511] SNESSolve line 2647 src/snes/interface/snes.c<br>[511]PETSC ERROR: [511] TimeStep line 1554 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[511]PETSC ERROR: [511] SolveSteadyState line 1429 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[511]PETSC ERROR: [511] ComputefixedBoundary line 588 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: [511] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[511]PETSC ERROR: [511] SetReferenceElement line 424 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[511]PETSC ERROR: --------------------- Error Message ------------------------------------<br>[511]PETSC ERROR: Signal received!<br>
[511]PETSC ERROR: ------------------------------------------------------------------------<br>[511]PETSC ERROR: Petsc Release Version 3.2.0, Patch 1, Mon Sep 12 16:01:51 CDT 2011 <br>[511]PETSC ERROR: See docs/changes/index.html for recent updates.<br>
[511]PETSC ERROR: See docs/faq.html for hints about trouble shooting.<br>[511]PETSC ERROR: See docs/index.html for manual pages.<br>[511]PETSC ERROR: ------------------------------------------------------------------------<br>
[511]PETSC ERROR: ./joab on a Janus-deb named node1376 by ronglian Sun Nov 27 12:50:41 2011<br>[511]PETSC ERROR: Libraries linked from /home/ronglian/soft/petsc-3.2-p1/Janus-debug/lib<br>[511]PETSC ERROR: Configure run at Tue Sep 13 18:32:21 2011<br>
[511]PETSC ERROR: Configure options --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=8 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --with-batch=1 --with-mpi-shared-libraries=1 --known-mpi-shared-libraries=0 --download-f-blas-lapack=1 --download-hypre=1 --download-superlu=1 --download-parmetis=1 --download-superlu_dist=1 --download-blacs=1 --download-scalapack=1 --with-debugging=1<br>
[511]PETSC ERROR: ------------------------------------------------------------------------<br>[511]PETSC ERROR: User provided function() line 0 in unknown directory unknown file<br>***ASSERTION failed on line 169 of file ccgraph.c: cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt)<br>
0 107 106 107 0<br>[404]PETSC ERROR: ------------------------------------------------------------------------<br>[404]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range<br>
[404]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>[404]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[404]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[404]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors<br>
[404]PETSC ERROR: likely location of problem given in stack below<br>[404]PETSC ERROR: --------------------- Stack Frames ------------------------------------<br>[404]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,<br>
[404]PETSC ERROR: INSTEAD the line number of the start of the function<br>[404]PETSC ERROR: is given.<br>[404]PETSC ERROR: [404] MatLUFactorNumeric_SuperLU_DIST line 280 src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c<br>
[404]PETSC ERROR: [404] MatLUFactorNumeric line 2864 src/mat/interface/matrix.c<br>[404]PETSC ERROR: [404] PCApply line 373 src/ksp/pc/interface/precon.c<br>[404]PETSC ERROR: [404] FGMREScycle line 119 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>
[404]PETSC ERROR: [404] KSPSolve_FGMRES line 282 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>[404]PETSC ERROR: [404] KSPSolve line 331 src/ksp/ksp/interface/itfunc.c<br>[404]PETSC ERROR: [404] SNES_KSPSolve line 3394 src/snes/interface/snes.c<br>
[404]PETSC ERROR: [404] SNESSolve_LS line 142 src/snes/impls/ls/ls.c<br>[404]PETSC ERROR: [404] SNESSolve line 2647 src/snes/interface/snes.c<br>[404]PETSC ERROR: [404] TimeStep line 1554 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[404]PETSC ERROR: [404] SolveSteadyState line 1429 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[404]PETSC ERROR: [404] ComputefixedBoundary line 588 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: [404] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[404]PETSC ERROR: [404] SetReferenceElement line 424 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[404]PETSC ERROR: --------------------- Error Message ------------------------------------<br>[404]PETSC ERROR: Signal received!<br>
[404]PETSC ERROR: ------------------------------------------------------------------------<br>[404]PETSC ERROR: Petsc Release Version 3.2.0, Patch 1, Mon Sep 12 16:01:51 CDT 2011 <br>[404]PETSC ERROR: See docs/changes/index.html for recent updates.<br>
[404]PETSC ERROR: See docs/faq.html for hints about trouble shooting.<br>[404]PETSC ERROR: See docs/index.html for manual pages.<br>[404]PETSC ERROR: ------------------------------------------------------------------------<br>
[404]PETSC ERROR: ./joab on a Janus-deb named node1708 by ronglian Sun Nov 27 12:50:41 2011<br>[404]PETSC ERROR: Libraries linked from /home/ronglian/soft/petsc-3.2-p1/Janus-debug/lib<br>[404]PETSC ERROR: Configure run at Tue Sep 13 18:32:21 2011<br>
[404]PETSC ERROR: Configure options --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=8 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --with-batch=1 --with-mpi-shared-libraries=1 --known-mpi-shared-libraries=0 --download-f-blas-lapack=1 --download-hypre=1 --download-superlu=1 --download-parmetis=1 --download-superlu_dist=1 --download-blacs=1 --download-scalapack=1 --with-debugging=1<br>
[404]PETSC ERROR: ------------------------------------------------------------------------<br>[404]PETSC ERROR: User provided function() line 0 in unknown directory unknown file<br>***ASSERTION failed on line 169 of file ccgraph.c: cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt)<br>
0 107 106 107 0<br>[371]PETSC ERROR: ------------------------------------------------------------------------<br>[371]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range<br>
[371]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>[371]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[371]PETSC" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[371]PETSC</a> ERROR: or try <a href="http://valgrind.org" target="_blank">http://valgrind.org</a> on GNU/linux and Apple Mac OS X to find memory corruption errors<br>
[371]PETSC ERROR: likely location of problem given in stack below<br>[371]PETSC ERROR: --------------------- Stack Frames ------------------------------------<br>[371]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,<br>
[371]PETSC ERROR: INSTEAD the line number of the start of the function<br>[371]PETSC ERROR: is given.<br>[371]PETSC ERROR: [371] MatLUFactorNumeric_SuperLU_DIST line 280 src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c<br>
[371]PETSC ERROR: [371] MatLUFactorNumeric line 2864 src/mat/interface/matrix.c<br>[371]PETSC ERROR: [371] PCApply line 373 src/ksp/pc/interface/precon.c<br>[371]PETSC ERROR: [371] FGMREScycle line 119 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>
[371]PETSC ERROR: [371] KSPSolve_FGMRES line 282 src/ksp/ksp/impls/gmres/fgmres/fgmres.c<br>[371]PETSC ERROR: [371] KSPSolve line 331 src/ksp/ksp/interface/itfunc.c<br>[371]PETSC ERROR: [371] SNES_KSPSolve line 3394 src/snes/interface/snes.c<br>
[371]PETSC ERROR: [371] SNESSolve_LS line 142 src/snes/impls/ls/ls.c<br>[371]PETSC ERROR: [371] SNESSolve line 2647 src/snes/interface/snes.c<br>[371]PETSC ERROR: [371] TimeStep line 1554 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[371]PETSC ERROR: [371] SolveSteadyState line 1429 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>[371]PETSC ERROR: [371] ComputefixedBoundary line 588 /home/rlchen/rlchen/soft/fixedmesh/code_changed/joab.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>[371]PETSC ERROR: [371] Elements line 290 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br>
[371]PETSC ERROR: [371] SetReferenceElement line 424 /home/rlchen/rlchen/soft/fixedmesh/code_changed/setelement.c<br><br><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<br>
This is part of the graph library Metis. Perhaps an invalid graph was<br>
passed to Metis? Without a stack trace (you can configure<br>
-with-debugging=1, the default), we don't even know whether this error was<br>
reached through PETSc, through your code, or through another library.<br>
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End of petsc-users Digest, Vol 35, Issue 84<br>
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</blockquote></div><br>
</blockquote></div><br><br clear="all"><div><br></div>-- <br>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>
-- Norbert Wiener<br>