On Tue, Aug 4, 2009 at 3:51 PM, Yixun Liu <span dir="ltr"><<a href="mailto:enjoywm@cs.wm.edu">enjoywm@cs.wm.edu</a>></span> wrote:<br><div class="gmail_quote"><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Hi,<br>
I encounter the error as I run make test,<br>
>make test<br>
Running test examples to verify correct installation<br>
Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI<br>
process<br>
See <a href="http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html" target="_blank">http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html</a><br>
DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:<br>
dat_registry_add_provider</blockquote><div><br>This looks like a bizarre failure with your OpenMPI compiler wrappers. Do they work<br>at all?<br><br> Matt<br> </div><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<br>
I list the output of configure. Hope it helpful for diagnosis.<br>
<br>
> ./config/configure.py --download-parmetis<br>
***************************************************************************************************************************************************************<br>
TESTING: alternateConfigureLibrary from<br>
PETSc.packages.petsc4py(config/PETSc/packages/petsc4py.py:69)<br>
Compilers:<br>
C Compiler: mpicc -Wall -Wwrite-strings -Wno-strict-aliasing -g3<br>
Fortran Compiler: mpif90 -Wall -Wno-unused-variable -g<br>
Linkers:<br>
Static linker: /usr/bin/ar cr<br>
PETSc:<br>
**<br>
** Before running "make" your PETSC_ARCH must be specified with:<br>
** ** setenv PETSC_ARCH linux-gnu-c-debug (csh/tcsh)<br>
** ** PETSC_ARCH=linux-gnu-c-debug; export PETSC_ARCH (sh/bash)<br>
**<br>
PETSC_DIR: /home/scratch/yixun/petsc-3.0.0-p3<br>
**<br>
** Now build the libraries with "make all"<br>
**<br>
Clanguage: C<br>
PETSc shared libraries: disabled<br>
PETSc dynamic libraries: disabled<br>
Scalar type:real<br>
MPI:<br>
Includes: -I/usr/lib64/mpi/gcc/openmpi/include<br>
-I/usr/lib64/mpi/gcc/openmpi/lib64<br>
X11:<br>
Includes: ['']<br>
Library: ['-lX11']<br>
BLAS/LAPACK: -llapack -lblas<br>
ParMetis:<br>
Includes: -I/usr/lib64/mpi/gcc/openmpi/include<br>
-I/usr/lib64/mpi/gcc/openmpi/lib64<br>
-I/home/scratch/yixun/petsc-3.0.0-p3/linux-gnu-c-debug/include<br>
Library:<br>
-Wl,-rpath,/home/scratch/yixun/petsc-3.0.0-p3/linux-gnu-c-debug/lib<br>
-L/home/scratch/yixun/petsc-3.0.0-p3/linux-gnu-c-debug/lib -lparmetis<br>
-lmetis<br>
*******************************************************************************************************************************************************************<br>
<font color="#888888"><br>
Yixun<br>
<br>
</font></blockquote></div><br><br clear="all"><br>-- <br>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener<br>