[petsc-users] Domain decomposition in PETSc for Molecular Dynamics

Mark Adams mfadams at lbl.gov
Sat Nov 4 07:40:05 CDT 2023


Hi MIGUEL,

This might be a good place to start: https://petsc.org/main/manual/vec/
Feel free to ask more specific questions, but the docs are a good place to
start.

Thanks,
Mark

On Fri, Nov 3, 2023 at 5:19 AM MIGUEL MOLINOS PEREZ <mmolinos at us.es> wrote:

> Dear all,
>
> I am currently working on the development of a in-house molecular dynamics
> code using PETSc and C++. So far the code works great, however it is a
> little bit slow since I am not exploiting MPI for PETSc vectors. I was
> wondering if there is a way to perform the domain decomposition efficiently
> using some PETSc functionality. Any feedback is highly appreciated.
>
> Best regards,
> Miguel
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