[petsc-users] PetscQuadratureCreate and PETSC_OBJECT_CLASSID

[Dave May]

Hi,

I was trying to use some of DT functionality (in particular
PetscDTGaussTensorQuadrature()) in petsc 3.5.2 and I encountered this error:


[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR: Invalid argument
[0]PETSC ERROR: Invalid object classid 0
This could happen if you compile with PETSC_HAVE_DYNAMIC_LIBRARIES, but
link with static libraries.
[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[0]PETSC ERROR: Petsc Release Version 3.5.2, Sep, 08, 2014
[0]PETSC ERROR: ./dmdadg.app on a arch-darwin-c-mpi-debug-f2c named
nikkan.local by dmay Tue Nov 18 20:34:56 2014
[0]PETSC ERROR: Configure options --download-openmpi=yes
--with-debugging=yes --with-fc=0 --download-f2cblaslapck=yes
PETSC_ARCH=arch-darwin-c-mpi-debug-f2c
[0]PETSC ERROR: #1 PetscClassRegLogGetClass() line 290 in
/Users/dmay/software/petsc-3.5.2/src/sys/logging/utils/classlog.c
[0]PETSC ERROR: #2 PetscLogObjCreateDefault() line 317 in
/Users/dmay/software/petsc-3.5.2/src/sys/logging/utils/classlog.c
[0]PETSC ERROR: #3 PetscQuadratureCreate() line 35 in
/Users/dmay/software/petsc-3.5.2/src/dm/dt/interface/dt.c
[0]PETSC ERROR: #4 PetscDTGaussTensorQuadrature() line 322 in
/Users/dmay/software/petsc-3.5.2/src/dm/dt/interface/dt.c
[0]PETSC ERROR: #5 DMDGSpace_ex4_quadrature() line 480 in dmdadg.c
[0]PETSC ERROR: #6 main() line 503 in dmdadg.c
[0]PETSC ERROR: ----------------End of Error Message -------send entire
error message to petsc-maint at mcs.anl.gov----------
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------

Snooping around in the source tree, the only place where I can find
PetscHeaderCreate being passed PETSC_OBJECT_CLASSID is within
src/dm/dt/interface/dt.c in the function PetscQuadratureCreate().

Is this is a bug or is my petsc build broken??

I'm sure I am linking against a dynamic library (or whatever you want to
call a dylib on OSX)

dmay at nikkan:~/codes/dgspace$ otool -L dmdadg.app
dmdadg.app:
*
/Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libpetsc.3.5.dylib
(compatibility version 3.5.0, current version 3.5.2)*

/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
(compatibility version 1.0.0, current version 1.0.0)

/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
(compatibility version 1.0.0, current version 1.0.0)
    /opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current
version 10.0.0)
    /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
version 1197.1.1)
    /usr/lib/libssl.0.9.8.dylib (compatibility version 0.9.8, current
version 50.0.0)
    /usr/lib/libcrypto.0.9.8.dylib (compatibility version 0.9.8, current
version 50.0.0)

/Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libmpi_cxx.1.dylib
(compatibility version 3.0.0, current version 3.3.0)
    /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version
120.0.0)

/Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libmpi.1.dylib
(compatibility version 7.0.0, current version 7.0.0)



Cheers,
  Dave
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