[petsc-users] Problem writing headers to log: 'Framework' object has no attribute 'compilerDefines

Barry Smith bsmith at mcs.anl.gov
Fri Sep 13 15:44:32 CDT 2013


   This directory does not seem to have any MPI compilers in that directory?

 --with-mpi-dir=/scratch/home0/pmatteo/research/lib_install

TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525)
  Locate a functional C compiler
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpicc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc...not found
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Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/hcc...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found
Checking for program /scratch/home0/pmatteo/research/lib_install/bin/mpcc_r...not found

On Sep 13, 2013, at 3:41 PM, Matteo Parsani <parsani.matteo at gmail.com> wrote:

> Dear PETSc developers,
> I have recently updated PETSc from its git repository.
> I am trying to compile it as I have done 3 weeks ago with the following options:
>  
> ./configure --prefix=/scratch/home0/pmatteo/research/workspace/codes/ssdc/deps/petsc --with-mpi-dir=/scratch/home0/pmatteo/research/lib_install --with-hdf5-dir=/scratch/home0/pmatteo/research/workspace/codes/ssdc/deps --with-metis-dir=/scratch/home0/pmatteo/research/workspace/codes/ssdc/deps --with-parmetis-dir=/scratch/home0/pmatteo/research/workspace/codes/ssdc/deps --with-valgrind-dir=/scratch/home0/pmatteo/research/lib_install --download-f-blas-lapack --download-hypre=yes --download-scalapack=yes --download-blacs=yes --download-superlu_dist=yes --download-umfpack=yes
> 
> But I get an error which I cannot explain:
> 
> ===============================================================================
>              Configuring PETSc to compile on your system                       
> ===============================================================================
> TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525)                                                                                                                                              *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> MPI compiler wrappers in /scratch/home0/pmatteo/research/lib_install/bin do not work. See http://www.mcs.anl.gov/petsc/documentation/faq.html#mpi-compilers
> 
> 
> Please, find in attachment the configure.log file.
> 
> I have gcc 4.7.3 and openmpi 1.6.4 installed and they are in my path.
> 
> Thank you.
> -- 
> Matteo
> <configure.log>



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