[petsc-users] installation error of 3.3

w_ang_temp w_ang_temp at 163.com
Thu Nov 22 10:20:51 CST 2012


Hello,
    When I install petsc-3.3-p4 in the cluster, I get an error information.
    When 'make PETSC_DIR=/public/soft/ddc/soft/petsc/petsc-3.3-p4 PETSC_ARCH=arch-linux2-c-opt test',
the error information is as follows:
[root at node21 petsc-3.3-p4]# make PETSC_DIR=/public/soft/ddc/soft/petsc/petsc-3.3-p4 PETSC_ARCH=arch-linux2-c-opt test
Running test examples to verify correct installation
Using PETSC_DIR=/public/soft/ddc/soft/petsc/petsc-3.3-p4 and PETSC_ARCH=arch-linux2-c-opt
--------------Error detected during compile or link!-----------------------
See http://www.mcs.anl.gov/petsc/documentation/faq.html
/public/soft/ddc/soft/petsc/petsc-3.3-p4/src/snes/examples/tutorials ex19
---------------------------------------------------------------------------
/public/soft/ddc/soft/mpich2/bin/mpicc -o ex19.o -c -wd1572 -O3 -I/public/soft/ddc/soft/petsc/petsc-3.3-p4/include -I/public/soft/ddc/soft/petsc/petsc-3.3-p4/arch-
linux2-c-opt/include -I/public/soft/ddc/soft/mpich2/include -D__INSDIR__=src/snes/examples/tutorials/ ex19.c
/public/soft/ddc/soft/mpich2/bin/mpicc -wd1572 -O3  -o ex19  ex19.o -L/public/soft/ddc/soft/petsc/petsc-3.3-p4/arch-linux2-c-opt/lib  -lpetsc -lX11 -Wl,-rpath,/pub
lic/soft/ddc/soft/petsc/petsc-3.3-p4/arch-linux2-c-opt/lib -lHYPRE -L/public/soft/ddc/soft/mpich2/lib -L/public/soft/compiler/intel/11/056/mkl/lib/em64t -L/public/
soft/compiler/intel/11/056/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -lmpichcxx -lstdc++ -lpthread -lflapack -lfblas -lmpichf90 -lifport -lifcore -lm -l
m -lmpichcxx -lstdc++ -lmpichcxx -lstdc++ -ldl -lmpich -lopa -lmpl -lrt -lpthread -limf -lsvml -lipgo -ldecimal -lgcc_s -lirc -lirc_s -ldl
/public/soft/compiler/intel/11/056/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail
/bin/rm -f ex19.o
C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2 MPI processes
--------------Error detected during compile or link!-----------------------
See http://www.mcs.anl.gov/petsc/documentation/faq.html
/public/soft/ddc/soft/petsc/petsc-3.3-p4/src/snes/examples/tutorials ex5f
---------------------------------------------------------------------------
/public/soft/ddc/soft/mpich2/bin/mpif90 -c  -O3   -I/public/soft/ddc/soft/petsc/petsc-3.3-p4/include -I/public/soft/ddc/soft/petsc/petsc-3.3-p4/arch-linux2-c-opt/i
nclude -I/public/soft/ddc/soft/mpich2/include    -o ex5f.o ex5f.F
/public/soft/ddc/soft/mpich2/bin/mpif90 -O3   -o ex5f ex5f.o -L/public/soft/ddc/soft/petsc/petsc-3.3-p4/arch-linux2-c-opt/lib  -lpetsc -lX11 -Wl,-rpath,/public/sof
t/ddc/soft/petsc/petsc-3.3-p4/arch-linux2-c-opt/lib -lHYPRE -L/public/soft/ddc/soft/mpich2/lib -L/public/soft/compiler/intel/11/056/mkl/lib/em64t -L/public/soft/co
mpiler/intel/11/056/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -lmpichcxx -lstdc++ -lpthread -lflapack -lfblas -lmpichf90 -lifport -lifcore -lm -lm -lmpi
chcxx -lstdc++ -lmpichcxx -lstdc++ -ldl -lmpich -lopa -lmpl -lrt -lpthread -limf -lsvml -lipgo -ldecimal -lgcc_s -lirc -lirc_s -ldl
/public/soft/compiler/intel/11/056/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail
/bin/rm -f ex5f.o
Fortran example src/snes/examples/tutorials/ex5f run successfully with 1 MPI process
Completed test examples
[root at node21 petsc-3.3-p4]#
    And in order to find the reason, I install 'petsc-3.2-p7.tar.gz' with the same procedure and it is ok.
So what is the reason?
    Thanks.
                                                                           Jim
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