Error using BoomerAMG with eqns

Ben Tay zonexo at gmail.com
Tue Jun 10 09:53:42 CDT 2008


Ya Thank you Barry. I also realised it.

Barry Smith wrote:
>
>   You use KSPGetPC(ksp_uv,pc_uv,ierr) but call PCSetType(pc,'hypre',ierr)
>
> this is why you should ALWAYS, always use implicit none
>
>    Barry
>
>
>
> On Jun 9, 2008, at 9:46 PM, Ben Tay wrote:
>
>> Hi,
>>
>> I tried to use BoomerAMG as the preconditioner. When I use ./a.out 
>> -pc_type hypre -pc_hypre_type boomeramg, I got
>>
>> KSP Object:
>> type: richardson
>>   Richardson: damping factor=1
>> maximum iterations=10000, initial guess is zero
>> tolerances:  relative=1e-05, absolute=1e-50, divergence=10000
>> left preconditioning
>> PC Object:
>> type: hypre
>>   HYPRE BoomerAMG preconditioning
>>   HYPRE BoomerAMG: Cycle type V
>>   HYPRE BoomerAMG: Maximum number of levels 25
>>   HYPRE BoomerAMG: Maximum number of iterations PER hypre call 1
>>   HYPRE BoomerAMG: Convergence tolerance PER hypre call 0
>>   HYPRE BoomerAMG: Threshold for strong coupling 0.25
>>   HYPRE BoomerAMG: Interpolation truncation factor 0
>>   HYPRE BoomerAMG: Interpolation: max elements per row 0
>>   HYPRE BoomerAMG: Number of levels of aggressive coarsening 0
>>   HYPRE BoomerAMG: Number of paths for aggressive coarsening 1
>>
>> However, when I add the BoomerAMG into my code, I got
>>
>> [3]PETSC ERROR: 
>> ------------------------------------------------------------------------
>> [3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, 
>> probably memory access out of range
>> [3]PETSC ERROR: Try option -start_in_debugger or 
>> -on_error_attach_debugger
>> [3]PETSC ERROR: or see 
>> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[3]PETSC 
>> ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple 
>> to find memory corruption errors
>> [3]PETSC ERROR: configure using --with-debugging=yes, recompile, 
>> link, and run
>> [3]PETSC ERROR: to get more information on the crash.
>> [3]PETSC ERROR: --------------------- Error Message 
>> ------------------------------------
>> [3]PETSC ERROR: Signal received!
>> [3]PETSC ERROR: 
>> ------------------------------------------------------------------------
>> [3]PETSC ERROR: Petsc Release Version 2.3.3, Patch 8, Fri Nov 16 
>> 17:03:40 CST 2007 HG revision: 414581156e67e55c761739b0deb119f7590d0f4b
>> [3]PETSC ERROR: See docs/changes/index.html for recent updates.
>> [3]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
>> [3]PETSC ERROR: See docs/index.html for manual pages.
>> [3]PETSC ERROR: 
>> ------------------------------------------------------------------------
>> [3]PETSC ERROR: ./a.out on a atlas3-mp named atlas3-c36 by g0306332 
>> Tue Jun 10 10:36:34 2008
>> [3]PETSC ERROR: Libraries linked from 
>> /nfs/home/enduser/g0306332/petsc-2.3.3-p8/lib/atlas3-mpi
>> [3]PETSC ERROR: Configure run at Tue Jan  8 22:22:08 2008
>>
>>
>> Here's part of my code:
>>
>> call MatAssemblyBegin(A_mat_uv,MAT_FINAL_ASSEMBLY,ierr)
>> call MatAssemblyEnd(A_mat_uv,MAT_FINAL_ASSEMBLY,ierr)
>>
>> call VecAssemblyBegin(b_rhs_uv,ierr)
>> call VecAssemblyEnd(b_rhs_uv,ierr)
>>
>> call VecAssemblyBegin(xx_uv,ierr)
>> call VecAssemblyEnd(xx_uv,ierr)
>>
>> call KSPSetOperators(ksp_uv,A_mat_uv,A_mat_uv,SAME_NONZERO_PATTERN,ierr)
>>
>> call KSPGetPC(ksp_uv,pc_uv,ierr)
>>
>> ksptype=KSPRICHARDSON
>>
>> call KSPSetType(ksp_uv,ksptype,ierr)
>>
>> call PCSetType(pc,'hypre',ierr)
>>
>> call PCHYPRESetType(pc,'boomeramg',ierr)
>>
>> call KSPSetFromOptions(ksp_uv,ierr)
>>
>> tol=1.e-5
>>
>> call 
>> KSPSetTolerances(ksp_uv,tol,PETSC_DEFAULT_DOUBLE_PRECISION,PETSC_DEFAULT_DOUBLE_PRECISION,PETSC_DEFAULT_INTEGER,ierr) 
>>
>>
>> call KSPSolve(ksp_uv,b_rhs_uv,xx_uv,ierr)
>>
>> call KSPGetConvergedReason(ksp_uv,reason,ierr)
>>
>>
>> The matrix changes every timestep so I have to call the 
>> preconditioner every time. So what did I do wrong? Btw, the matrix is 
>> A_mat_uv, RHS is b_rhs_uv and the answer is xx_uv.
>>
>> Thank you very much.
>>
>> Regards.
>>
>>
>
>




More information about the petsc-users mailing list