Multilevel solver
Amit.Itagi at seagate.com
Amit.Itagi at seagate.com
Wed Apr 23 15:05:04 CDT 2008
Here is my make log.
==========================================
See documentation/faq.html and documentation/bugreporting.html
for help with installation problems. Please send EVERYTHING
printed out below when reporting problems
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==========================================
On Wed Apr 23 15:37:17 EDT 2008 on tabla
Machine characteristics: Linux tabla 2.6.22-14-generic #1 SMP Tue Feb 12 07:42:25 UTC 2008 i686 GNU/Linux
-----------------------------------------
Using PETSc directory: /home/amit/programs/ParEM/petsc-dev
Using PETSc arch: linux-gnu-c-debug
-----------------------------------------
PETSC_VERSION_RELEASE 0
PETSC_VERSION_MAJOR 2
PETSC_VERSION_MINOR 3
PETSC_VERSION_SUBMINOR 3
PETSC_VERSION_PATCH 12
PETSC_VERSION_DATE "May, 23, 2007"
PETSC_VERSION_PATCH_DATE "unknown"
PETSC_VERSION_HG "unknown"
-----------------------------------------
Using configure Options: --PETSC_ARCH=linux-gnu-c-debug --with-scalar-type=complex --with-debugging=yes --with-clanguage=cxx --with-mpi=1
--download-mpich=1 --with-metis=1 --download-metis=1 --with-parmetis=1 --download-parmetis=1 --with-superlu_dist=1 --download-superlu_dist=1
--with-mumps=1 --download-blacs=1 --download-scalapack=1 --download-mumps=1 COPTFLAGS="-O3 -march=p4 -mtune=p4 -ffast-math -malign-double
-funroll-loops -pipe -fomit-frame-pointer -finline-functions -msse2" CXXOPTFLAGS="-O3 -march=p4 -mtune=p4 -ffast-math -malign-double -funroll-loops
-pipe -fomit-frame-pointer -finline-functions -msse2" --with-shared=0
Using configuration flags:
#define INCLUDED_PETSCCONF_H
#define IS_COLORING_MAX 65535
#define STDC_HEADERS 1
#define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT
#define PETSC_HAVE_SUPERLU_DIST 1
#define PETSC_STATIC_INLINE static inline
#define PETSC_HAVE_BLACS 1
#define PETSC_HAVE_MUMPS 1
#define PETSC_DIR_SEPARATOR '/'
#define PETSC_HAVE_BLASLAPACK 1
#define PETSC_PATH_SEPARATOR ':'
#define PETSC_REPLACE_DIR_SEPARATOR '\\'
#define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1
#define PETSC_RESTRICT __restrict__
#define PETSC_HAVE_X11 1
#define PETSC_HAVE_SOWING 1
#define PETSC_HAVE_SCALAPACK 1
#define PETSC_HAVE_MPI 1
#define PETSC_USE_SOCKET_VIEWER 1
#define PETSC_HAVE_PARMETIS 1
#define PETSC_HAVE_C2HTML 1
#define PETSC_HAVE_FORTRAN 1
#define PETSC_HAVE_STRING_H 1
#define PETSC_HAVE_SYS_TYPES_H 1
#define PETSC_HAVE_ENDIAN_H 1
#define PETSC_HAVE_SYS_PROCFS_H 1
#define PETSC_HAVE_LINUX_KERNEL_H 1
#define PETSC_HAVE_TIME_H 1
#define PETSC_HAVE_MATH_H 1
#define PETSC_HAVE_STDLIB_H 1
#define PETSC_HAVE_SYS_PARAM_H 1
#define PETSC_HAVE_SYS_SOCKET_H 1
#define PETSC_HAVE_UNISTD_H 1
#define PETSC_HAVE_SYS_WAIT_H 1
#define PETSC_HAVE_LIMITS_H 1
#define PETSC_HAVE_SEARCH_H 1
#define PETSC_HAVE_NETINET_IN_H 1
#define PETSC_HAVE_FLOAT_H 1
#define PETSC_HAVE_SYS_SYSINFO_H 1
#define PETSC_HAVE_SYS_RESOURCE_H 1
#define PETSC_HAVE_SYS_TIMES_H 1
#define PETSC_HAVE_NETDB_H 1
#define PETSC_HAVE_MALLOC_H 1
#define PETSC_HAVE_PWD_H 1
#define PETSC_HAVE_FCNTL_H 1
#define PETSC_HAVE_STRINGS_H 1
#define PETSC_HAVE_MEMORY_H 1
#define PETSC_TIME_WITH_SYS_TIME 1
#define PETSC_HAVE_SYS_TIME_H 1
#define PETSC_HAVE_SYS_UTSNAME_H 1
#define PETSC_USING_F90 1
#define PETSC_PRINTF_FORMAT_CHECK(A,B) __attribute__((format (printf, A, B)))
#define PETSC_C_STATIC_INLINE static inline
#define PETSC_HAVE_FORTRAN_UNDERSCORE 1
#define PETSC_HAVE_CXX_NAMESPACE 1
#define PETSC_C_RESTRICT __restrict__
#define PETSC_USE_F90_SRC_IMPL 1
#define PETSC_CXX_RESTRICT __restrict__
#define PETSC_CXX_STATIC_INLINE static inline
#define PETSC_HAVE_LIBBLAS 1
#define PETSC_HAVE_LIBDMUMPS 1
#define PETSC_HAVE_LIBZMUMPS 1
#define PETSC_HAVE_LIBSCALAPACK 1
#define PETSC_HAVE_LIBM 1
#define PETSC_HAVE_LIBMETIS 1
#define PETSC_HAVE_LIBLAPACK 1
#define PETSC_HAVE_LIBCMUMPS 1
#define PETSC_HAVE_LIBSMUMPS 1
#define PETSC_HAVE_LIBGCC_S 1
#define PETSC_HAVE_LIBPORD 1
#define PETSC_HAVE_LIBGFORTRANBEGIN 1
#define PETSC_HAVE_ERF 1
#define PETSC_HAVE_LIBSUPERLU_DIST_2 1
#define PETSC_HAVE_LIBBLACS 1
#define PETSC_HAVE_LIBPARMETIS 1
#define PETSC_HAVE_LIBGFORTRAN 1
#define PETSC_ARCH_NAME "linux-gnu-c-debug"
#define PETSC_ARCH linux
#define PETSC_DIR /home/amit/programs/ParEM/petsc-dev
#define PETSC_CLANGUAGE_CXX 1
#define PETSC_USE_ERRORCHECKING 1
#define PETSC_MISSING_DREAL 1
#define PETSC_SIZEOF_MPI_COMM 4
#define PETSC_BITS_PER_BYTE 8
#define PETSC_SIZEOF_MPI_FINT 4
#define PETSC_SIZEOF_VOID_P 4
#define PETSC_RETSIGTYPE void
#define PETSC_HAVE_CXX_COMPLEX 1
#define PETSC_SIZEOF_LONG 4
#define PETSC_USE_FORTRANKIND 1
#define PETSC_SIZEOF_SIZE_T 4
#define PETSC_SIZEOF_CHAR 1
#define PETSC_SIZEOF_DOUBLE 8
#define PETSC_SIZEOF_FLOAT 4
#define PETSC_HAVE_C99_COMPLEX 1
#define PETSC_SIZEOF_INT 4
#define PETSC_SIZEOF_LONG_LONG 8
#define PETSC_SIZEOF_SHORT 2
#define PETSC_HAVE_STRCASECMP 1
#define PETSC_HAVE_ISNAN 1
#define PETSC_HAVE_POPEN 1
#define PETSC_HAVE_SIGSET 1
#define PETSC_HAVE_GETWD 1
#define PETSC_HAVE_TIMES 1
#define PETSC_HAVE_SNPRINTF 1
#define PETSC_HAVE_GETPWUID 1
#define PETSC_HAVE_ISINF 1
#define PETSC_HAVE_GETHOSTBYNAME 1
#define PETSC_HAVE_SLEEP 1
#define PETSC_HAVE_FORK 1
#define PETSC_HAVE_RAND 1
#define PETSC_HAVE_GETTIMEOFDAY 1
#define PETSC_HAVE_UNAME 1
#define PETSC_HAVE_GETHOSTNAME 1
#define PETSC_HAVE_MKSTEMP 1
#define PETSC_HAVE_SIGACTION 1
#define PETSC_HAVE_DRAND48 1
#define PETSC_HAVE_VA_COPY 1
#define PETSC_HAVE_CLOCK 1
#define PETSC_HAVE_ACCESS 1
#define PETSC_HAVE_SIGNAL 1
#define PETSC_HAVE_GETRUSAGE 1
#define PETSC_HAVE_MEMALIGN 1
#define PETSC_HAVE_GETDOMAINNAME 1
#define PETSC_HAVE_TIME 1
#define PETSC_HAVE_LSEEK 1
#define PETSC_HAVE_SOCKET 1
#define PETSC_HAVE_SYSINFO 1
#define PETSC_HAVE_READLINK 1
#define PETSC_HAVE_REALPATH 1
#define PETSC_HAVE_MEMMOVE 1
#define PETSC_HAVE__GFORTRAN_IARGC 1
#define PETSC_SIGNAL_CAST
#define PETSC_HAVE_GETCWD 1
#define PETSC_HAVE_VPRINTF 1
#define PETSC_HAVE_BZERO 1
#define PETSC_HAVE_GETPAGESIZE 1
#define PETSC_USE_COMPLEX 1
#define PETSC_USE_GDB_DEBUGGER 1
#define PETSC_HAVE_GFORTRAN_IARGC 1
#define PETSC_USE_DEBUG 1
#define PETSC_USE_INFO 1
#define PETSC_USE_LOG 1
#define PETSC_IS_COLOR_VALUE_TYPE short
#define PETSC_USE_CTABLE 1
#define PETSC_USE_PROC_FOR_SIZE 1
#define PETSC_HAVE_MPI_COMM_C2F 1
#define PETSC_HAVE_MPI_COMM_F2C 1
#define PETSC_HAVE_MPI_FINT 1
#define PETSC_HAVE_MPI_F90MODULE 1
#define PETSC_HAVE_MPI_ALLTOALLW 1
#define PETSC_HAVE_MPI_COMM_SPAWN 1
#define PETSC_HAVE_MPI_WIN_CREATE 1
#define PETSC_HAVE_MPI_FINALIZED 1
#define HAVE_GZIP 1
#define PETSC_BLASLAPACK_UNDERSCORE 1
-----------------------------------------
Using include paths: -I/home/amit/programs/ParEM/petsc-dev -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include
-I/home/amit/programs/ParEM/petsc-dev/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include
-I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include
-I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include
------------------------------------------
Using C/C++ compiler: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpicxx
C/C++ Compiler version:
Using Fortran compiler: gfortran -g
Fortran Compiler version:
-----------------------------------------
Using C/C++ linker:
Using Fortran linker: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpif90
-----------------------------------------
Using libraries: -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib
-lpetscts -lpetscsnes -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetsc -lX11
-Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lsuperlu_dist_2.2
-Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lparmetis -lmetis
-Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lcmumps -ldmumps
-lsmumps -lzmumps -lpord -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib
-L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lscalapack -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib
-L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lblacs -llapack -lblas -L/usr/lib/gcc/i486-linux-gnu/4.1.3 -L/lib -lgcc_s
-lgfortranbegin -lgfortran -lm -L/usr/lib/gcc/i486-linux-gnu/4.2.1 -lm -lstdc++ -lstdc++ -lgcc_s
------------------------------------------
Using mpiexec: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpiexec
==========================================
/bin/rm -f -f /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib/libpetsc*.*
BEGINNING TO COMPILE LIBRARIES IN ALL DIRECTORIES
=========================================
libfast in: /home/amit/programs/ParEM/petsc-dev/src
libfast in: /home/amit/programs/ParEM/petsc-dev/src/inline
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/socket
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/socket/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/string
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/string/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/vu
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/x
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/x/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/ps
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/dll
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/dll/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/time
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/time/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls/rand
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls/rand48
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-src
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-src/fsrc
make[8]: *** No rule to make target `libf'. Stop.
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-mod
make[7]: *** No rule to make target `petscmod.o'. Stop.
make[6]: *** [buildmod] Error 2
make[5]: [libfast] Error 2 (ignored)
libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/shared
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/shared/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/general
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/general/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/stride
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/stride/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls/constant
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls/string
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/seq/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/csrperm
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/crl
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/superlu_dist
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/mumps
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/csrperm
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/crl
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/aij
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/maij
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/is
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/is/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/mpi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/mpi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/normal
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/normal/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/lrc
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/lrc/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/scatter
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/scatter/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/blockmat
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/blockmat/seq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/composite
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/composite/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls/pmetis
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls/pmetis/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/color
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/color/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/jacobi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/jacobi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/none
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/sor
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/sor/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/shell
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/shell/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/dmmg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/dmmg/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/eisens
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/eisens/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/ksp
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/ksp/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/redundant
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/redundant/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/is
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/is/nn
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/pbjacobi
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mat
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/fieldsplit
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/fieldsplit/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ilu
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ilu/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/icc
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/cholesky
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/cholesky/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/galerkin
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/galerkin/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/openmp
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asa
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/cp
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface
iguess.c: In function ‘PetscErrorCode KSPFischerGuessFormGuess_Method1(KSPFischerGuess_Method1*, _p_Vec*, _p_Vec*)’:
iguess.c:79: warning: cannot pass objects of non-POD type ‘struct std::complex<double>’ through ‘...’; call will abort at runtime
iguess.c: In function ‘PetscErrorCode KSPFischerGuessFormGuess_Method2(KSPFischerGuess_Method2*, _p_Vec*, _p_Vec*)’:
iguess.c:198: warning: cannot pass objects of non-POD type ‘struct std::complex<double>’ through ‘...’; call will abort at runtime
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgs
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgsl
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgsl/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/cgne
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/gltr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/gltr/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/nash
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/nash/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/stcg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/stcg/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cgs
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/lgmres
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cheby
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cheby/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/rich
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/rich/ftn-autolibfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/lsqr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/preonly
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/tcqmr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/tfqmr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/qcg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/qcg/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bicg
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/minres
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/symmlq
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/lcd
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/mf
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/mf/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/tr
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/test
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/picard
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tutorials/ex10d
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/euler
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/rk
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/rk/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit/beuler
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit/cn
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/pseudo
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/pseudo/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/basic
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/basic/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/f90-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/examples
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/examples/tests
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/ftn-auto
libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ftn-custom
libfast in: /home/amit/programs/ParEM/petsc-dev/src/contrib
libfast in: /home/amit/programs/ParEM/petsc-dev/src/contrib/fun3d
libfast in: /home/amit/programs/ParEM/petsc-dev/src/benchmarks
libfast in: /home/amit/programs/ParEM/petsc-dev/src/fortran
libfast in: /home/amit/programs/ParEM/petsc-dev/src/fortran/fsrc
make[7]: *** No rule to make target `libf'. Stop.
libfast in: /home/amit/programs/ParEM/petsc-dev/src/docs
libfast in: /home/amit/programs/ParEM/petsc-dev/include
libfast in: /home/amit/programs/ParEM/petsc-dev/include/finclude
libfast in: /home/amit/programs/ParEM/petsc-dev/tutorials
libfast in: /home/amit/programs/ParEM/petsc-dev/tutorials/multiphysics
Completed building libraries
=========================================
Shared libraries disabled
********************************************************************
Error during compile, check linux-gnu-c-debug/conf/make.log
Send it and linux-gnu-c-debug/conf/configure.log to petsc-maint at mcs.anl.gov
********************************************************************
make: [all] Error 1 (ignored)
Running test examples to verify correct installation
make[2]: [ex19.PETSc] Error 2 (ignored)
make[2]: [ex5f.PETSc] Error 2 (ignored)
--------------Error detected during compile or link!-----------------------
See http://www.mcs.anl.gov/petsc/petsc-2/documentation/troubleshooting.html
gfortran -I/home/amit/programs/ParEM/petsc-dev/include/finclude -c -o ex5f.o ex5f.F
In file included from ex5f.F:43:
ex5f.h:32: error: include/finclude/petsc.h: No such file or directory
ex5f.h:33: error: include/finclude/petscvec.h: No such file or directory
ex5f.h:34: error: include/finclude/petscda.h: No such file or directory
ex5f.h:35: error: include/finclude/petscis.h: No such file or directory
ex5f.h:36: error: include/finclude/petscmat.h: No such file or directory
ex5f.h:37: error: include/finclude/petscksp.h: No such file or directory
ex5f.h:38: error: include/finclude/petscpc.h: No such file or directory
ex5f.h:39: error: include/finclude/petscsnes.h: No such file or directory
make[3]: *** [ex5f.o] Error 1
Completed test examples
I guess the tests fail because the program looks for
include/finclude/petsc.h in /include/finclude. What about libf ?
"Matthew Knepley"
<knepley at gmail.co
m> To
Sent by: petsc-users at mcs.anl.gov
owner-petsc-users cc
@mcs.anl.gov
No Phone Info Subject
Available Re: Multilevel solver
04/23/2008 02:43
PM
Please respond to
petsc-users at mcs.a
nl.gov
On Wed, Apr 23, 2008 at 1:32 PM, <Amit.Itagi at seagate.com> wrote:
> Barry,
>
> Is the installation of petsc-dev different from the installation of the
> 2.3.3 release ? I ran the config. But the folder tree seems to be
> different. Hence, make is giving problems.
1) Always always send the error log. I cannot tell anything from the
description "problems".
2) Some things have moved, but of course, make will work with the new
organization.
Matt
> Amit
>
> Barry Smith
> <bsmith at mcs.anl.g
> ov>
To
> Sent by: petsc-users at mcs.anl.gov
> owner-petsc-users
cc
> @mcs.anl.gov
> No Phone Info
Subject
> Available Re: Multilevel solver
>
>
> 04/22/2008 10:08
> PM
>
>
> Please respond to
> petsc-users at mcs.a
> nl.gov
>
>
>
>
>
>
> Amit,
>
> Using a a PCSHELL should be fine (it can be used with GMRES),
> my guess is there is a memory corruption error somewhere that is
> causing the crash. This could be tracked down with www.valgrind.com
>
> Another way to you could implement this is with some very recent
> additions I made to PCFIELDSPLIT that are in petsc-dev
> (http://www-unix.mcs.anl.gov/petsc/petsc-as/developers/index.html)
> With this you would chose
> PCSetType(pc,PCFIELDSPLIT
> PCFieldSplitSetIS(pc,is1
> PCFieldSplitSetIS(pc,is2
> PCFieldSplitSetType(pc,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE
> to use LU on A11 use the command line options
> -fieldsplit_0_pc_type lu -fieldsplit_0_ksp_type preonly
> and SOR on A22
> -fieldsplit_1_pc_type sor -fieldsplit_1_ksp_type preonly -
> fieldsplit_1_pc_sor_lits <lits> where
> <its> is the number of iterations you want to use block A22
>
> is1 is the IS that contains the indices for all the vector entries in
> the 1 block while is2 is all indices in the
> vector for the 2 block. You can use ISCreateGeneral() to create these.
>
> Probably it is easiest just to try this out.
>
> Barry
>
>
> On Apr 22, 2008, at 8:45 PM, Amit.Itagi at seagate.com wrote:
>
> >
> > Hi,
> >
> > I am trying to implement a multilevel method for an EM problem. The
> > reference is : "Comparison of hierarchical basis functions for
> > efficient
> > multilevel solvers", P. Ingelstrom, V. Hill and R. Dyczij-Edlinger,
> > IET
> > Sci. Meas. Technol. 2007, 1(1), pp 48-52.
> >
> > Here is the summary:
> >
> > The matrix equation Ax=b is solved using GMRES with a multilevel
> > pre-conditioner. A has a block structure.
> >
> > A11 A12 * x1 = b1
> > A21 A22 x2 b2
> >
> > A11 is mxm and A33 is nxn, where m is not equal to n.
> >
> > Step 1 : Solve A11 * e1 = b1 (parallel LU using
> > superLU or
> > MUMPS)
> >
> > Step 2: Solve A22 * e2 =b2-A21*e1 (might either user
> > a SOR
> > solver or a parallel LU)
> >
> > Step 3: Solve A11* e1 = b1-A12*e2 (parallel LU)
> >
> > This gives the approximate solution to
> >
> > A11 A12 * e1 = b1
> > A21 A22 e2 b2
> >
> > and is used as the pre-conditioner for the GMRES.
> >
> >
> > Which PetSc method can implement this pre-conditioner ? I tried a
> > PCSHELL
> > type PC. With Hong's help, I also got the parallel LU to work
> > withSuperLU/MUMPS. My program runs successfully on multiple
> > processes on a
> > single machine. But when I submit the program over multiple
> > machines, I get
> > a crash in the PCApply routine after several GMRES iterations. I
> > think this
> > has to do with using PCSHELL with GMRES (which is not a good idea). Is
> > there a different way to implement this ? Does this resemble the usage
> > pattern of one of the AMG preconditioners ?
> >
> >
> > Thanks
> >
> > Rgds,
> > Amit
> >
>
>
>
>
--
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which
their experiments lead.
-- Norbert Wiener
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