how to use PetscMap?

Yixun Liu yxliu at fudan.edu.cn
Thu Nov 2 08:23:36 CST 2006


Hi,

I want to use PetscMap to gets the range of values owned by this process, e.g.,PetscMapGetLocalRange(map,&Istart,&Iend). Then according to Istart and Iend to determine the parameters used by MatCreateMPIAIJ to create a matrix.

Best,

Yixun

----- Original Message ----- 
From: "Matthew Knepley" <knepley at gmail.com>
To: <petsc-users at mcs.anl.gov>
Sent: Thursday, November 02, 2006 9:56 PM
Subject: Re: how to use PetscMap?


> There is no replacement. What are you tring to do here?
> 
>   Matt
> 
> On 11/2/06, Yixun Liu <yxliu at fudan.edu.cn> wrote:
>> Hi,
>>
>> I want to change the code, which is based on old version PETSC to version 2.3.2. The old petsc code are,
>>
>> PetscMap map;
>> ierr = PetscMapCreateMPI(PETSC_COMM_WORLD,PETSC_DECIDE,n,&map);CHKERRQ(ierr);
>> ierr = PetscMapGetLocalRange(map,&Istart,&Iend); CHKERRQ(ierr);
>> ierr = PetscMapDestroy(map); CHKERRQ(ierr);
>>
>> If 2.3.2 does not support PetscMap, which class should I use?
>>
>> Best,
>>
>> Yixun
>>
>>
>>
>> ----- Original Message -----
>> From: "Matthew Knepley" <knepley at gmail.com>
>> To: <petsc-users at mcs.anl.gov>
>> Sent: Thursday, November 02, 2006 9:07 PM
>> Subject: Re: how to use PetscMap?
>>
>>
>> > No, in 2.3.2 PetscMap no longer exists.
>> >
>> >   Matt
>> >
>> > On 11/2/06, Yixun Liu <yxliu at fudan.edu.cn> wrote:
>> >>
>> >>
>> >> Hi,
>> >>
>> >> I reveive the error as,
>> >>
>> >> [0]PETSC ERROR:
>> >> ------------------------------------------------------------------------
>> >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation,
>> >> probably memory access out of range
>> >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger
>> >> [0]PETSC ERROR: or see
>> >> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC
>> >> ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to
>> >> find memory corruption errors
>> >> [0]PETSC ERROR: likely location of problem given in stack below
>> >> [0]PETSC ERROR: ---------------------  Stack Frames
>> >> ------------------------------------
>> >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,
>> >> [0]PETSC ERROR:       INSTEAD the line number of the start of the function
>> >> [0]PETSC ERROR:       is given.
>> >> [0]PETSC ERROR: [0] PetscMapInitialize line 41
>> >> src/vec/vec/impls/mpi/d:\MyVC\PETSC-~1.2-P\src\vec\vec\impls\mpi\pmap.c
>> >> [0]PETSC ERROR: --------------------- Error Message
>> >> ------------------------------------
>> >> [0]PETSC ERROR: Signal received!
>> >> [0]PETSC ERROR:
>> >> ------------------------------------------------------------------------
>> >> [0]PETSC ERROR: Petsc Release Version 2.3.2, Patch 3, Fri Sep 29 17:09:34
>> >> CDT 2006 HG revision:
>> >> 9215af156a9cbcdc1ec666e2b5c7934688ddc526
>> >> [0]PETSC ERROR: See docs/changes/index.html for recent updates.
>> >> [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
>> >> [0]PETSC ERROR: See docs/index.html for manual pages.
>> >> [0]PETSC ERROR:
>> >> ------------------------------------------------------------------------
>> >> [0]PETSC ERROR: Unknown Name on a cygwin-cx named DMRC-6700512 by DMRC-user
>> >> Thu Nov 02 16:22:47 2006
>> >> [0]PETSC ERROR: Libraries linked from
>> >> /cygdrive/D/MyVC/petsc-2.3.2-p3/lib/cygwin-cxx-debug
>> >> [0]PETSC ERROR: Configure run at Wed Nov  1 10:08:10 2006
>> >> [0]PETSC ERROR: Configure options
>> >> --with-mpi-dir=/cygdrive/d/MPICH2 --with-cc="win32fe cl"
>> >> --with-fc=0 --with-cxx="win32fe cl" --with-clanguage=cxx
>> >> --with-blas-lapack-dir=/cygdrive/D/MyVC/petsc-2.3.2-p3/externalpackages/w_mkl_serial_p_8.1.001/mkl_serial_8.1/mkl_8.1_serial/ia32/lib
>> >> COPTFLAGS="-MD -Z7" CXXOPTFLAGS="-MD -Z7" --useThreads=0 --with-shared=0
>> >> [0]PETSC ERROR:
>> >> ------------------------------------------------------------------------
>> >> [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown
>> >> file
>> >> unable to read the cmd header on the pmi context, Undefined dynamic error
>> >> code.
>> >>
>> >> job aborted:
>> >> rank: node: exit code[: error message]
>> >> 0: dmrc-6700512: 59: application called MPI_Abort(MPI_COMM_WORLD, 59) -
>> >> process 0
>> >>
>> >> I think this error maybe caused by these codes,
>> >>
>> >>  PetscMap *map;
>> >>  ierr = PetscMapInitialize(PETSC_COMM_WORLD, map);
>> >>  CHKERRQ(ierr);
>> >>  ierr = PetscMapSetSize (map, n);
>> >>  ierr = PetscMapGetLocalRange(map,&Istart,&Iend);
>> >> CHKERRQ(ierr);
>> >>
>> >> Is it correct to use the PetscMap like this?
>> >>
>> >> Best,
>> >>
>> >> Yixun
>> >>
>> >>
>> >>
>> >>
>> >
>> >
>> > --
>> > "Failure has a thousand explanations. Success doesn't need one" -- Sir
>> > Alec Guiness
>> >
>>
>>
> 
> 
> -- 
> "Failure has a thousand explanations. Success doesn't need one" -- Sir
> Alec Guiness
>




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