<div dir="ltr">FWIW, here is my current status.<div><br></div><div>08:08 main= spock:/gpfs/alpine/csc314/scratch/adams/petsc$ make PETSC_DIR=/gpfs/alpine/csc314/scratch/adams/petsc PETSC_ARCH=arch-olcf-spock check<br>Running check examples to verify correct installation<br>Using PETSC_DIR=/gpfs/alpine/csc314/scratch/adams/petsc and PETSC_ARCH=arch-olcf-spock<br>Possible error running C/C++ src/snes/tutorials/ex19 with 1 MPI process<br>See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html">http://www.mcs.anl.gov/petsc/documentation/faq.html</a><br>lid velocity = 0.0016, prandtl # = 1., grashof # = 1.<br> 0 KSP Residual norm 0.0406612<br> 1 KSP Residual norm 0.036923<br> 2 KSP Residual norm 0.0191849<br> 3 KSP Residual norm 0.00201589<br> 4 KSP Residual norm 0.000376045<br> 5 KSP Residual norm 4.2974e-05<br> 6 KSP Residual norm 5.96585e-06<br> 7 KSP Residual norm 4.5398e-07<br> 8 KSP Residual norm 6.30474e-08<br> 9 KSP Residual norm 5.55518e-09<br> 10 KSP Residual norm 6.180e-10<br> 11 KSP Residual norm 6.211e-11<br> Linear solve converged due to CONVERGED_RTOL iterations 11<br> 0 KSP Residual norm 3.32845e-06<br> 1 KSP Residual norm 9.0003e-07<br> 2 KSP Residual norm 1.32594e-07<br> 3 KSP Residual norm 1.49857e-08<br> 4 KSP Residual norm 1.31887e-09<br> 5 KSP Residual norm 2.105e-10<br> 6 KSP Residual norm 2.827e-11<br> 7 KSP Residual norm < 1.e-11<br> 8 KSP Residual norm < 1.e-11<br> 9 KSP Residual norm < 1.e-11<br> 10 KSP Residual norm < 1.e-11<br> Linear solve converged due to CONVERGED_RTOL iterations 10<br>Number of SNES iterations = 2<br>Possible error running C/C++ src/snes/tutorials/ex19 with 2 MPI processes<br>See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html">http://www.mcs.anl.gov/petsc/documentation/faq.html</a><br>lid velocity = 0.0016, prandtl # = 1., grashof # = 1.<br> 0 KSP Residual norm 0.0406612<br> 1 KSP Residual norm 0.0281101<br> 2 KSP Residual norm 0.00773873<br> 3 KSP Residual norm 0.00165731<br> 4 KSP Residual norm 0.000395614<br> 5 KSP Residual norm 8.67655e-05<br> 6 KSP Residual norm 1.69495e-05<br> 7 KSP Residual norm 3.70051e-06<br> 8 KSP Residual norm 5.97067e-07<br> 9 KSP Residual norm 1.02242e-07<br> 10 KSP Residual norm 1.75727e-08<br> 11 KSP Residual norm 3.84826e-09<br> 12 KSP Residual norm 6.414e-10<br> 13 KSP Residual norm 1.380e-10<br> Linear solve converged due to CONVERGED_RTOL iterations 13<br> 0 KSP Residual norm 3.32846e-06<br> 1 KSP Residual norm 8.99139e-07<br> 2 KSP Residual norm 1.72893e-07<br> 3 KSP Residual norm 3.733e-08<br> 4 KSP Residual norm 6.67427e-09<br> 5 KSP Residual norm 1.22785e-09<br> 6 KSP Residual norm 2.551e-10<br> 7 KSP Residual norm 5.458e-11<br> 8 KSP Residual norm 1.050e-11<br> 9 KSP Residual norm < 1.e-11<br> 10 KSP Residual norm < 1.e-11<br> 11 KSP Residual norm < 1.e-11<br> 12 KSP Residual norm < 1.e-11<br> Linear solve converged due to CONVERGED_RTOL iterations 12<br>Number of SNES iterations = 2<br>3,5c3,14<br>< 1 SNES Function norm 4.12227e-06<br>< 2 SNES Function norm 6.098e-11<br>< Number of SNES iterations = 2<br>---<br>> 0 KSP Residual norm 0.0406612<br>> 1 KSP Residual norm 0.21263<br>> 2 KSP Residual norm 1.09192<br>> 3 KSP Residual norm 6.9087<br>> 4 KSP Residual norm 23.4292<br>> 5 KSP Residual norm 57.7558<br>> 6 KSP Residual norm 118.076<br>> 7 KSP Residual norm 213.527<br>> 8 KSP Residual norm 354.101<br>> 9 KSP Residual norm 550.58<br>> Linear solve did not converge due to DIVERGED_DTOL iterations 9<br>> Number of SNES iterations = 0<br>/gpfs/alpine/csc314/scratch/adams/petsc/src/snes/tutorials<br>Possible problem with ex19 running with hypre, diffs above<br>=========================================<br>gmake[3]: [makefile:115: runex3k_kokkos] Error 134 (ignored)<br>21,25c21,26<br>< 1 SNES Function norm 2.952582418265e-01<br>< 2 SNES Function norm 4.502293658739e-04<br>< 3 SNES Function norm 1.389665806646e-09<br>< Number of SNES iterations = 3<br>< Norm of error 1.49752e-10 Iterations 3<br>---<br>> Memory access fault by GPU node-4 (Agent handle: 0xb08c90) on address 0xe17000. Reason: Page not present or supervisor privilege.<br>> Memory access fault by GPU node-5 (Agent handle: 0xb0d3c0) on address 0xe11000. Reason: Page not present or supervisor privilege.<br>> srun: error: spock25: task 0: Aborted<br>> srun: launch/slurm: _step_signal: Terminating StepId=304034.3<br>> slurmstepd: error: *** STEP 304034.3 ON spock25 CANCELLED AT 2021-12-10T08:08:40 ***<br>> srun: error: spock25: task 1: Aborted (core dumped)<br>/gpfs/alpine/csc314/scratch/adams/petsc/src/snes/tutorials<br>Possible problem with ex3k running with kokkos-kernels, diffs above<br>=========================================<br>*******************Error detected during compile or link!*******************<br>See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html">http://www.mcs.anl.gov/petsc/documentation/faq.html</a><br>/gpfs/alpine/csc314/scratch/adams/petsc/src/snes/tutorials ex5f<br>*********************************************************<br>ftn -fPIC -fPIC -I/gpfs/alpine/csc314/scratch/adams/petsc/include -I/gpfs/alpine/csc314/scratch/adams/petsc/arch-olcf-spock/include -I/gpfs/alpine/geo127/proj-shared/spock/petsc/current/arch-opt-cray/include -I/opt/rocm-4.3.0/include ex5f.F90 -Wl,-rpath,/gpfs/alpine/csc314/scratch/adams/petsc/arch-olcf-spock/lib -L/gpfs/alpine/csc314/scratch/adams/petsc/arch-olcf-spock/lib -Wl,-rpath,/gpfs/alpine/geo127/proj-shared/spock/petsc/current/arch-opt-cray/lib -L/gpfs/alpine/geo127/proj-shared/spock/petsc/current/arch-opt-cray/lib -Wl,-rpath,/opt/rocm-4.3.0/lib -L/opt/rocm-4.3.0/lib -Wl,-rpath,/opt/cray/pe/mpich/8.1.10/gtl/lib -L/opt/cray/pe/mpich/8.1.10/gtl/lib -Wl,-rpath,/opt/cray/pe/gcc/8.1.0/snos/lib64 -L/opt/cray/pe/gcc/8.1.0/snos/lib64 -Wl,-rpath,/opt/cray/pe/libsci/<a href="http://21.08.1.2/CRAY/9.0/x86_64/lib">21.08.1.2/CRAY/9.0/x86_64/lib</a> -L/opt/cray/pe/libsci/<a href="http://21.08.1.2/CRAY/9.0/x86_64/lib">21.08.1.2/CRAY/9.0/x86_64/lib</a> -Wl,-rpath,/opt/cray/pe/mpich/8.1.10/ofi/cray/10.0/lib -L/opt/cray/pe/mpich/8.1.10/ofi/cray/10.0/lib -Wl,-rpath,/opt/cray/pe/dsmml/0.2.2/dsmml/lib -L/opt/cray/pe/dsmml/0.2.2/dsmml/lib -Wl,-rpath,/opt/cray/pe/pmi/6.0.14/lib -L/opt/cray/pe/pmi/6.0.14/lib -Wl,-rpath,/opt/cray/pe/cce/12.0.3/cce/x86_64/lib -L/opt/cray/pe/cce/12.0.3/cce/x86_64/lib -Wl,-rpath,/opt/cray/xpmem/2.2.40-2.1_2.44__g3cf3325.shasta/lib64 -L/opt/cray/xpmem/2.2.40-2.1_2.44__g3cf3325.shasta/lib64 -Wl,-rpath,/opt/cray/pe/cce/12.0.3/cce-clang/x86_64/lib/clang/12.0.0/lib/linux -L/opt/cray/pe/cce/12.0.3/cce-clang/x86_64/lib/clang/12.0.0/lib/linux -Wl,-rpath,/opt/cray/pe/gcc/8.1.0/snos/lib/gcc/x86_64-suse-linux/8.1.0 -L/opt/cray/pe/gcc/8.1.0/snos/lib/gcc/x86_64-suse-linux/8.1.0 -Wl,-rpath,/opt/cray/pe/cce/12.0.3/binutils/x86_64/x86_64-unknown-linux-gnu/lib -L/opt/cray/pe/cce/12.0.3/binutils/x86_64/x86_64-unknown-linux-gnu/lib -lpetsc -lHYPRE -lkokkoskernels -lkokkoscontainers -lkokkoscore -lhipsparse -lhipblas -lrocsparse -lrocsolver -lrocblas -lrocrand -lamdhip64 -lstdc++ -ldl -lmpi_gtl_hsa -lmpifort_cray -lmpi_cray -ldsmml -lpmi -lpmi2 -lxpmem -lpgas-shmem -lquadmath -lmodules -lfi -lcraymath -lf -lu -lcsup -lgfortran -lpthread -lgcc_eh -lm -lclang_rt.craypgo-x86_64 -lclang_rt.builtins-x86_64 -lquadmath -lstdc++ -ldl -lmpi_gtl_hsa -o ex5f<br>/opt/cray/pe/cce/12.0.3/binutils/x86_64/x86_64-pc-linux-gnu/bin/ld: warning: alignment 128 of symbol `$host_init$$runtime_init_for_iso_c_binding$iso_c_binding_' in /opt/cray/pe/cce/12.0.3/cce/x86_64/lib/libmodules.so is smaller than 256 in /tmp/pe_46424/ex5f_1.o<br>/opt/cray/pe/cce/12.0.3/binutils/x86_64/x86_64-pc-linux-gnu/bin/ld: warning: alignment 64 of symbol `$data_init$iso_c_binding_' in /opt/cray/pe/cce/12.0.3/cce/x86_64/lib/libmodules.so is smaller than 256 in /tmp/pe_46424/ex5f_1.o<br>Possible error running Fortran example src/snes/tutorials/ex5f with 1 MPI process<br>See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html">http://www.mcs.anl.gov/petsc/documentation/faq.html</a><br> 0 KSP Residual norm < 1.e-11<br> Linear solve converged due to CONVERGED_ATOL iterations 0<br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Dec 10, 2021 at 8:07 AM Mark Adams <<a href="mailto:mfadams@lbl.gov">mfadams@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">I am trying to get Spock working (again) and am having problems.<div><br></div><div>* make check seems to fail but it is hard to see what is going on. Maybe we should start here, but let me continue.</div><div><br></div><div>* GAMG seems to work on the CPU</div><div><br></div><div>* I have this for configuring with Kokkos. I am guessing these versions are out of data. What is current practice:</div><div> '--with-kokkos-hip-arch=VEGA908',<br> '--download-kokkos-commit=3.4.01',<br> '--download-kokkos-kernels-commit=3.4.01',<br></div><div><br></div><div>* Should I hold off (and tell my eager user to do same)?</div><div><br></div><div>Thanks,</div><div>Mark</div></div>
</blockquote></div>