Executing: uname -s stdout: Linux ================================================================================ ================================================================================ Starting configure run at Thu, 03 Dec 2020 10:19:37 -0600 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --download-sowing=1 --with-blaslapack-dir=/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl --with-debugging=1 --with-mpi-dir=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64 --with-shared-libraries=1 Working directory: /share/apps/petsc-master Machine platform: uname_result(system='Linux', node='mef90.schur.math.lsu.edu', release='3.10.0-1127.18.2.el7.x86_64', version='#1 SMP Sun Jul 26 15:27:06 UTC 2020', machine='x86_64', processor='x86_64') Python version: 3.6.8 (default, Nov 16 2020, 16:55:22) [GCC 4.8.5 20150623 (Red Hat 4.8.5-44)] ================================================================================ Environmental variables LMOD_FAMILY_COMPILER_VERSION=2020.2 MKLROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl MANPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/man:/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/man:/share/apps/intel-2020.2/man/common:/usr/share/lmod/lmod/share/man XDG_SESSION_ID=21945 BASHRC_READ=1 HOSTNAME=mef90.schur.math.lsu.edu _ModuleTable003_=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 SELINUX_ROLE_REQUESTED= __LMOD_REF_COUNT_CLASSPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/mpi.jar:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/daal.jar:1 INTEL_LICENSE_FILE=/share/apps/intel-2020.2/compilers_and_libraries/linux/licenses:/opt/intel/licenses:/home/blaise/intel/licenses IPPROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp I_MPI_F77=ifort SHELL=/bin/bash TERM=xterm-256color __LMOD_REF_COUNT_MODULEPATH=/home/blaise/.modulefiles:1;/etc/modulefiles:1;/share/apps/modulefiles/base:1;/share/apps/modulefiles/Linux:1;/share/apps/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1;/share/apps/modulefiles/intel2020.2:1 HISTSIZE=1000 LMOD_ROOT=/usr/share/lmod SLURM_MPI_TYPE=pmi2 SSH_CLIENT=174.64.7.167 55014 22 MODULEPATH_ROOT=/share/apps/modulefiles PETSC_ARCH=sowing-test LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 SELINUX_USE_CURRENT_RANGE= LMOD_PKG=/usr/share/lmod/lmod QTDIR=/usr/lib64/qt-3.3 QTINC=/usr/lib64/qt-3.3/include LMOD_VERSION=8.2.7 SSH_TTY=/dev/pts/5 __LMOD_REF_COUNT_LOADEDMODULES=gmake/4.3:1;intel/2020.2:1;impi/2020.2:1;petsc/master-g:1 QT_GRAPHICSSYSTEM_CHECKED=1 USER=blaise LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45: LMOD_sys=Linux LD_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:/share/apps/intel-2020.2/debugger_2020/libipt/intel64/lib:/share/apps/intel-2020.2/debugger_2020/python/intel64/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 INTEL_HOME=/share/apps/intel-2020.2/compilers_and_libraries/linux PSTLROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl FI_PROVIDER_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/prov SSH_AUTH_SOCK=/tmp/ssh-5jDvL6G8Wz/agent.131848 _ModuleTable004_=ZmlsZXMvYmFzZTovc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9MaW51eDovc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= CPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl/stdlib:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/include __LMOD_REF_COUNT__LMFILES_=/share/apps/modulefiles/base/gmake/4.3.lua:1;/share/apps/modulefiles/base/intel/2020.2.lua:1;/share/apps/modulefiles/intel2020.2/impi/2020.2.lua:1;/share/apps/modulefiles/intel2020.2/petsc/master-g.lua:1 MEF90_DIR=/home/blaise/Development/mef90/mef90 LMOD_FAMILY_MPI_VERSION=2020.2 NLSPATH=/share/apps/intel-2020.2/debugger_2020/gdb/intel64/share/locale/%l_%t/%N:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/share/apps/intel-2020.2/compilers_and_libraries/linux/compiler/lib/intel64/locale/%l_%t/%N PATH=/share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64:/share/apps/gmake-4.3/bin:/home/blaise/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin MAIL=/var/spool/mail/blaise HS2D=/Volumes/VTrak1/Groups/vf/HydraulicFracturing2D/ScalingTest2D/ _ModuleTable001_=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 __LMOD_REF_COUNT_NLSPATH=/share/apps/intel-2020.2/debugger_2020/gdb/intel64/share/locale/%l_%t/%N:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/compiler/lib/intel64/locale/%l_%t/%N:1 TBBROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb PWD=/share/apps/petsc-master _LMFILES_=/share/apps/modulefiles/base/gmake/4.3.lua:/share/apps/modulefiles/base/intel/2020.2.lua:/share/apps/modulefiles/intel2020.2/impi/2020.2.lua:/share/apps/modulefiles/intel2020.2/petsc/master-g.lua SING_OPTS=--bind /var/spool --bind /etc/ssh/ssh_known_hosts LANG=en_US.UTF-8 MODULEPATH=/home/blaise/.modulefiles:/etc/modulefiles:/share/apps/modulefiles/base:/share/apps/modulefiles/Linux:/share/apps/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/share/apps/modulefiles/intel2020.2 VFGMRSDIR=/home/blaise/Development/VF_GMRS _ModuleTable_Sz_=4 LOADEDMODULES=gmake/4.3:intel/2020.2:impi/2020.2:petsc/master-g __LMOD_REF_COUNT_INFOPATH=/opt/rh/devtoolset-9/root/usr/share/info:1 SING_IMAGE= SELINUX_LEVEL_REQUESTED= I_MPI_F90=ifort LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod I_MPI_CC=icc DAALROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/daal HISTCONTROL=ignoredups HOME=/home/blaise SHLVL=1 __LMOD_REF_COUNT_PATH=/share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64:1;/share/apps/gmake-4.3/bin:1;/home/blaise/bin:2;/usr/lib64/qt-3.3/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1 I_MPI_CXX=icpc __LMOD_REF_COUNT_CPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl/stdlib:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/include:1 _ModuleTable002_=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 VFDIR=/home/blaise/Development/VF_Standalone BASH_ENV=/usr/share/lmod/lmod/init/bash BASH_EXECUTED=yes I_MPI_FC=ifort LOGNAME=blaise PYTHONPATH=:/home/blaise/Development/mef90/mef90/python QTLIB=/usr/lib64/qt-3.3/lib SSH_CONNECTION=174.64.7.167 55014 130.39.247.246 22 XDG_DATA_DIRS=/home/blaise/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share:/usr/share CLASSPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/mpi.jar:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/daal.jar MODULESHOME=/usr/share/lmod/lmod RHEL_VERSION_MAJOR=7 __LMOD_REF_COUNT_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64:1 MPI_HOME=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64 LESSOPEN=||/usr/bin/lesspipe.sh %s LMOD_SETTARG_FULL_SUPPORT=no __LMOD_REF_COUNT_LD_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:3;/share/apps/intel-2020.2/debugger_2020/libipt/intel64/lib:1;/share/apps/intel-2020.2/debugger_2020/python/intel64/lib:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64:1 PKG_CONFIG_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/bin/pkgconfig INFOPATH=/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/info LMOD_FAMILY_COMPILER=intel DISPLAY=localhost:10.0 XDG_RUNTIME_DIR=/run/user/1026 LMOD_DIR=/usr/share/lmod/lmod/libexec __LMOD_REF_COUNT_MANPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/man:3;/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/man:1;/share/apps/intel-2020.2/man/common:1;/usr/share/lmod/lmod/share/man:1 MODULE_COMPILER=intel2020.2 PETSC_DIR=/share/apps/petsc-master LMOD_FAMILY_MPI=impi I_MPI_ROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi BASH_FUNC_module()=() { eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh) } BASH_FUNC_ml()=() { eval $($LMOD_DIR/ml_cmd "$@") } Files in path provided by default path /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin: nccopy h5clear h5debug ncmpidiff pnetcdf-config pnetcdf_version h5unjam bib2html h5repack gif2h5 h5redeploy h5pcc tohtml ph5diff doc2lt pstoxbm h5diff ncvalidator h5import pstogif mapnames nc-config bfort h5copy h5dump ncoffsets ncgen doctext h5perf ncgen3 h5mkgrp h5ls h5jam ncmpigen h52gif ncmpidump h5pfc h5watch h5stat cdfdiff ncdump h5repart h5format_convert h5perf_serial /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin: mpifc tune cpuinfo IMB-MPI1 mpitune_fast IMB-P2P impi_info mpif90 IMB-MT mpiicc mpiexec hydra_bstrap_proxy mpicc hydra_pmi_proxy mpigcc IMB-NBC mpirun mpivars.sh mpivars.csh IMB-RMA mpif77 mpiicpc legacy mpigxx mpiexec.hydra mpicxx mpitune hydra_nameserver mpiifort /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin: fi_info fi_pingpong /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64: tselect proforder icc map_opts profmerge gcore-ia xild icpc codecov fpp profdcg xiar gdb-ia ifort /share/apps/gmake-4.3/bin: gmake make /home/blaise/bin: slurm_passthrough.sh LMMTunnel.sh visitwrapperdist.sh visitwrapperseq.sh singularity.sh ngrok rsub /usr/lib64/qt-3.3/bin: /usr/local/bin: a2ping a5toa4 adhocfilelist afm2afm afm2pl afm2tfm aleph allcm allec allneeded amstex arara arlatex asy authorindex autoinst autosp axohelp bbl2bib bbox bg5+latex bg5+pdflatex bg5conv bg5latex bg5pdflatex bib2gls bibdoiadd biber bibexport bibmradd bibtex bibtex8 bibtexu biburl2doi bibzbladd bundledoc cachepic cef5conv cef5latex cef5pdflatex cefconv ceflatex cefpdflatex cefsconv cefslatex cefspdflatex cfftot1 checkcites checklistings chkdvifont chktex chkweb cjk-gs-integrate cllualatex cluttex clxelatex context contextjit convbkmk convertgls2bib cslatex csplain ctan-o-mat ctanbib ctangle ctanify ctanupload ctie ctwill ctwill-refsort ctwill-twinx cweave de-macro depythontex detex devnag deweb diadia disdvi dosepsbin dt2dv dtxgen dv2dt dvi2fax dvi2tty dviasm dvibook dviconcat dvicopy dvidvi dvigif dvihp dviinfox dvilj dvilj2p dvilj4 dvilj4l dvilj6 dvilualatex dvilualatex-dev dviluatex dvipdfm dvipdfmx dvipdft dvipng dvipos dvips dvired dviselect dvispc dvisvgm dvitodvi dvitomp dvitype e2pall ebb ebong eplain epsffit epspdf epspdftk epstopdf eptex etex euptex exceltex extconv extractbb extractres fig4latex findhyph fmtutil fmtutil-sys fmtutil-user fontinst fragmaster gbklatex gbkpdflatex getmapdl gftodvi gftopk gftype gregorio gsftopk hbf2gf ht htcontext htlatex htmex httex httexi htxelatex htxetex includeres inimf initex installfont-tl jadetex jamo-normalize jfmutil kanji-config-updmap kanji-config-updmap-sys kanji-config-updmap-user ketcindy kanji-fontmap-creator komkindex kpseaccess kpsepath kpsereadlink kpsestat kpsetool kpsewhere kpsewhich kpsexpand l3build lacheck lamed latex latex-dev latex-git-log latex-papersize latex2man latex2nemeth latexdef latexdiff latexdiff-vc latexfileversion latexindent latexmk latexpand latexrevise lily-glyph-commands lily-image-commands lily-rebuild-pdfs listbib listings-ext.sh lollipop ltx2crossrefxml ltxfileinfo ltximg lua2dox_filter luacsplain luajittex lualatex lualatex-dev luaotfload-tool luatex luatools lwarpmk m-tx mag make4ht makedtx makeglossaries makeglossaries-lite makeindex makejvf match_parens mathspic mendex mex mf mf-nowin mf2pt1 mflua mflua-nowin mfluajit mfluajit-nowin mfplain mft mk4ht mkgrkindex mkindex mkjobtexmf mkocp mkofm mkpic mkt1font mktexfmt mktexlsr mktexmf mktexpk mktextfm mllatex mltex mmafm mmpfb mpost mptopdf msxlint mtxrun mtxrunjit multibibliography musixflx musixtex odvicopy odvitype ofm2opl omfonts opl2ofm ot2kpx otangle otfinfo otftotfm otp2ocp outocp ovf2ovp ovp2ovf pamphletangler patgen pbibtex pdf180 pdf270 pdf90 pdfannotextractor pdfatfi pdfbook pdfbook2 pdfclose pdfcrop pdfcslatex pdfcsplain pdfetex pdfflip pdfjadetex pdfjam pdfjam-pocketmod pdfjam-slides3up pdfjam-slides6up pdfjoin pdflatex pdflatex-dev pdflatexpicscale pdfmex pdfnup pdfopen pdfpun pdftex pdftex-quiet pdftosrc pdfxmltex pdfxup pdvitomp pdvitype pedigree perltex pfarrei pfb2pfa pk2bm pkfix pkfix-helper pktogf pktype platex platex-dev pltotf pmpost pmxab pmxchords pn2pdf pooltype ppltotf prepmx ps2eps ps2frag ps2pk ps4pdf psbook psjoin pslatex psnup psresize psselect pst2pdf pstops ptex ptex2pdf ptftopl purifyeps pygmentex pythontex r-mpost r-pmpost r-upmpost repstopdf rpdfcrop rubibtex rubikrotation rumakeindex rungs scor2prt simpdftex sjisconv sjislatex sjispdflatex splitindex srcredact sty2dtx svn-multi synctex t1ascii t1asm t1binary t1disasm t1dotlessj t1lint t1mac t1rawafm t1reencode t1testpage t1unmac t4ht tangle teckit_compile tex tex2aspc tex2xindy tex4ebook tex4ht texconfig texconfig-dialog texconfig-sys texcount texdef texdiff texdirflatten texdoc texdoctk texexec texfot texhash texindy texlinks texliveonfly texloganalyser texlua texluac texluajit texluajitc texmfstart texosquery texosquery-jre5 texosquery-jre8 texsis tftopl thumbpdf tie tlcockpit tlmgr tlshell tpic2pdftex ttf2afm ttf2kotexfont ttf2pk ttf2tfm ttfdump ttftotype42 typeoutfileinfo ulqda upbibtex updmap updmap-sys updmap-user updvitomp updvitype uplatex uplatex-dev upmendex upmpost uppltotf uptex uptftopl urlbst utf8mex vftovp vlna vpe vpl2ovp vpl2vpl vptovf weave webquiz wofm2opl wopl2ofm wordcount wovf2ovp wovp2ovf xasy xdvi xdvi-xaw xdvipdfmx xelatex xelatex-dev xetex xhlatex xindex xindy xindy.mem xindy.run xmltex yplan docker-compose /usr/bin: xzless catchsegv xzmore gencat lz4 xrdb getent lz4c xset iconv killall ldd oldfind locale xargs localedef hunspell makedb dumpiso pldd sendiso rpcgen testlibraw sotruss testgdbm sprof file last tzselect nettle-hash getconf nettle-lfib-stream alias pkcs1-conv bash sexp-conv bashbug chacl bashbug-64 peekfd bg prtstat cd getfacl command pstree fc pstree.x11 fg setfacl getopts fusermount jobs ulockmgr_server read trust sh celtdec051 umask celtenc051 unalias eqn mesg wait geqn wall info gneqn infokey gnroff xmlcatalog gpic less xmllint groff gpg-error ca-legacy sed grops egrep grotty fgrep gsoelim grep find wavpack json_reformat gtbl a2p json_verify gtroff xmlwf neqn h2ph sqlite3 nroff xsltproc pic c2ph p11-kit post-grohtml libtar pre-grohtml which wvgain awk preconv dgawk soelim gawk tbl perl igawk troff pgawk wvunpack lua zsoelim luac cd-paranoia idn bunzip2 cpio xzgrep psed orc-bugreport bzcat unxz dvcont xz bzcmp xzcat bzdiff xzcmp bzgrep xzdec bzip2 xzdiff bzip2recover xzegrep bzless xzfgrep lz4cat bzmore unlz4 cd-drive plistutil cd-info setxkbmap cd-read xkbcomp cdda-player gtar mkrfc2734 tar panelctl cmp iso-info diff iso-read diff3 mmc-tool sdiff pinentry-curses lzop update-ca-trust libieee1284_test iceauth sessreg showrgb xgamma xhost xinput xkill xmodmap xrandr xrefresh xsetmode xsetpointer xsetroot xstdcmap xmlsec1 exempi pinentry ypdomainname checkisomd5 idiag-socket-details db_archive nf-ct-add db_checkpoint nf-ct-list db_deadlock nf-exp-add teamnl zip nf-exp-delete db_dump nf-exp-list db_dump185 nf-log db_hotbackup nf-monitor db_load nf-queue db_log_verify nl-addr-add xauth make nl-addr-delete cdparanoia lz nl-addr-list lessecho mcat nl-fib-lookup lesskey mcd nl-link-enslave m17n-conv pcre-config nl-link-ifindex2name iptables-xml compile_et nl-link-name2ifindex lesspipe.sh mdel nl-link-release db_printlog nl-link-set pod2man mdir nl-link-stats pod2text mdu nl-list-caches perldoc mmd nl-list-sockets db_recover nl-monitor piconv mrd nl-neigh-add pod2usage mren nl-neigh-delete find2perl mzip nl-neigh-list pl2pm tgz nl-neightbl-list pod2html uz nl-route-add splain xxd nl-route-delete zipdetails tabs nl-route-get pstruct tic nl-route-list perl5.16.3 toe nl-rule-list perlbug tput nl-tctree-list perlthanks tset nl-util-addr s2p gss-client genl-ctrl-list dbilogstrip [ nl-class-add dbiprof arch nl-class-delete dbiproxy cat nl-class-list sndfile-resample nl-classid-lookup db_replicate nl-cls-add keyctl comm nl-cls-delete db_stat nl-cls-list ex krb5-config nl-link-list rvi sim_client nl-pktloc-lookup rview cp nl-qdisc-add vi uuclient nl-qdisc-delete view niceload nl-qdisc-list attr parallel soundstretch db_tuner whiptail db_upgrade lastb getfattr cut dnsdomainname db_verify domainname bc date hostname setfattr dd nisdomainname curve_keygen dc df md5sum gzip implantisomd5 mkdir zcat scmp_sys_resolver mknod ttmkfdir mktemp zipcloak nl zcmp zipnote nice znew zipsplit nohup funzip nproc unzipsfx numfmt zipgrep fc-list mv fc-match unzip zipinfo od gio gmake mkfifo ar amuFormat.sh paste mattrib pathchk mbadblocks pinky mcheck pr as mclasserase printenv mcomp printf mcopy ptx dwp mdeltree pwd nm mformat readlink minfo realpath mkmanifest rm size mlabel rmdir mmount runcon mmove seq ld mpartition sha1sum mshortname sha224sum mshowfat sha256sum mtools sha384sum mtoolstest sha512sum mtype shred mxtar shuf gdb paperconf sleep checksctp sort fros sctp_darn split sctp_status stat ncat sctp_test stdbuf withsctp stty nc captoinfo sum curl clear sync rpm infocmp tac mail infotocap tail Mail reset tee nail base64 test gpg basename timeout chcon touch chgrp tr gpg2 chmod true gpgv chown truncate cksum tsort csplit fc-pattern dir tty yum dircolors uname dirname fc-query du unexpand echo fc-scan env uniq iptc expand unlink expr users factor vdir sg false fc-validate fmt wc cal fold who chfn groups whoami head yes chrt hostid pydoc id fc-cache install fc-cache-64 join fc-cat link python ln fc-conflist logname ls gapplication python2 python2.7 aserver gunzip gzexe zdiff zegrep zfgrep zforce zgrep zless zmore envsubst gdbus xdg-desktop-menu gio-querymodules-64 strings flite_time glib-compile-schemas gettext gsettings strip abs2rel update-mime-database xdg-email chsh gst-inspect-1.0 xdg-icon-resource gst-launch-1.0 xdg-mime col gst-stats-1.0 xdg-open i386 gst-typefind-1.0 gettext.sh secret-tool msgattrib pkg-config msgcat bdftopcf msgcmp bdftruncate msgcomm fonttosfnt msgconv mkfontdir msgen mkfontscale msgexec ucs2any ld.gold diff-jars xorg-x11-fonts-update-dirs msgfilter gvfs-cat msgfmt gvfs-copy msggrep gvfs-info msghack gvfs-less msginit gvfs-ls msgmerge gvfs-mime msgunfmt gvfs-mkdir xdg-screensaver gvfs-monitor-dir xdg-settings ipcs gvfs-monitor-file msguniq gvfs-mount ngettext gvfs-move recode-sr-latin gvfs-open xgettext gvfs-rename chattr gvfs-rm lsattr gvfs-save openssl kill gvfs-set-attribute chardetect gvfs-trash gcore gvfs-tree pwmake look desktop-file-edit startx find-jar desktop-file-install xinit jvmjar desktop-file-validate xdg-desktop-icon lsns update-desktop-database gdb-add-index enchant pwscore more enchant-lsmod gstack csslint-0.6 pstack glxspheres64 fipscheck isodebug fipshmac isodump dvd+rw-booktype isoinfo dvd+rw-format isovfy dvd+rw-mediainfo gparted dvd-ram-control ssm mkisofs cpustat growisofs addr2line wayland-scanner c++filt gst-feedback elfedit gst-inspect gprof gst-launch ld.bfd gst-typefind objcopy gst-xmlinspect objdump gst-xmllaunch ranlib gst-feedback-0.10 readelf build-classpath flite gst-inspect-0.10 gst-launch-0.10 gst-typefind-0.10 gst-xmlinspect-0.10 gst-xmllaunch-0.10 osinfo-db-export osinfo-db-import osinfo-db-path osinfo-db-validate lchsh checkpolicy build-classpath-directory applydeltarpm raw build-jar-repository makedeltarpm rev check-binary-files rpmdumpheader clean-binary-files mailx su create-jar-links combinedeltarpm ul rebuild-jar-repository passwd free xmvn-builddep gpg-connect-agent pflags geoipupdate pmap easy_install geoiplookup ps easy_install-2.7 gpg-zip coverage geoiplookup6 pwdx coverage-2.7 gpgconf coverage2 gpgparsemail pyinotify gpgsplit pchrt gpgv2 ptaskset watchgnupg drill debuginfo-install ldns-chaos urlgrabber top ldns-compare-zones needs-restarting ldns-dane package-cleanup ldns-dpa ksflatten w ldns-gen-zone repo-rss ldns-key2ds ksshell kmod ldns-keyfetcher repo-graph ldns-keygen repoclosure ldns-mx repodiff ldns-notify ksvalidator ping ldns-nsec3-hash ksverdiff lsmd ldns-read-zone devdump chvt ldns-resolver repomanage ldns-revoke repoquery ldns-rrsig nettest open ldns-signzone tcbench scp ldns-test-edns reposync ldns-testns repotrack ldns-update glreadtest sftp ldns-verify-zone readcd ssh ldns-version show-installed ldns-walk show-changed-rco ldns-zcat yum-config-manager ldns-zsplit verifytree ldnsd yum-builddep mokutil find-repos-of-install setup-nsssysinit gr2fonttest X setup-nsssysinit.sh yum-debug-dump certutil yum-debug-restore cmsutil yum-groups-manager crlutil yumdownloader modutil gpg-agent Xorg nss-policy-check mergerepo pk12util createrepo signver modifyrepo ssltap hangul rpm2cpio compress rpmdb uncompress rpmkeys fribidi rpmquery ndptool rpmverify scriptreplay lchfn cdrecord checkmodule sedismod sedispol lsscsi sbcdec sbcenc sbcinfo chage gpasswd lastlog newgidmap newgrp newuidmap chmem colcrt colrm column dmesg eject fallocate findmnt flock getopt hexdump ionice ipcmk ipcrm isosize linux32 linux64 logger login lsblk lscpu lsipc lslocks lslogins lsmem mcookie mount mountpoint namei nsenter prlimit rename renice script dbus-monitor setarch dbus-run-session setpriv dbus-send setsid dbus-test-tool setterm dbus-uuidgen tailf pkaction taskset pkcheck umount pkexec unshare pkttyagent utmpdump dbus-binding-tool uuidgen satyr wdctl systemd-sysv-convert whereis dbus-launch write dconf x86_64 gconf-merge-tree pgrep gconftool-2 pkill grub2-editenv skill secon slabtop reporter-mantisbt snice pkcon tload pkmon uptime run-parts vmstat crontab watch ping6 dracut tracepath lsinitrd tracepath6 mkinitrd ipcalc bootctl usleep busctl plymouth coredumpctl sim_lsmplugin hostnamectl lsmcli journalctl systemd-machine-id-setup kernel-install simc_lsmplugin localectl dumpkeys loginctl kbd_mode machinectl loadkeys systemctl systemd-notify systemd-analyze systemd-loginctl cvt systemd-ask-password setfont systemd-cat systemd-nspawn systemd-cgls systemd-path gtf systemd-cgtop systemd-run lpr systemd-coredumpctl systemd-stdio-bridge systemd-delta systemd-tmpfiles systemd-detect-virt timedatectl lp systemd-escape udevadm lpq systemd-firstboot dbus-cleanup-sockets systemd-hwdb dbus-daemon lprm systemd-inhibit psfstriptable deallocvt systemd-tty-ask-password-agent dbus-update-activation-environment pkla-admin-identities pkla-check-authorization gsettings-data-convert libwacom-list-local-devices grub2-mkpasswd-pbkdf2 unicode_start unicode_stop fgconsole getkeycodes kbdinfo kbdrate loadunimap mapscrn openvt psfaddtable psfgettable eu-findtextrel psfxtable eu-ranlib resizecons eu-objdump setkeycodes eu-readelf setleds eu-size setmetamode eu-stack setvtrgb grub2-mknetdir showconsolefont eu-strings showkey eu-strip vlock grub2-mkrescue cd-create-profile grub2-mkstandalone cd-fix-profile eu-unstrip cd-iccdump ssh-keygen cd-it8 slogin colormgr ssh-agent libinput grub2-mkimage java libinput-debug-events grub2-mklayout jjs libinput-list-devices ssh-add mc-tool grub2-syslinux2cfg mc-wait-for-name audit2allow orbd reporter-upload audit2why rmid reporter-rhtsupport chcat vstp reporter-bugzilla ssh-copy-id rxe_cfg ssh-keyscan nm-online kdumpctl nmcli consolehelper report-cli ndctl bccmd quota bluemoon sandbox Xvnc bluetoothctl quotasync btattach firewall-offline-cmd btmon firewall-cmd ciptool VGAuthService gatttool vmhgfs-fuse hciattach vm-support hciconfig vmtoolsd hcidump vmware-hgfsclient hcitool vmware-checkvm hex2hcd vmware-namespace-cmd l2ping vmware-rpctool l2test vmware-toolbox-cmd mpris-proxy vmware-vgauth-cmd rctest vmware-xferlogs rfcomm qmicli sdptool semodule_package linux-boot-prober qmi-network os-prober numad grub2-file bond2team vcut grub2-menulst2cfg teamd play grub2-mkrelpath teamdctl rec grub2-render-label eu-addr2line sox grub2-script-check eu-ar soxi grub2-fstest eu-elfcmp gjs grub2-glue-efi eu-elfcompress grub2-kbdcomp eu-elflint ibus grub2-mkfont mbim-network eu-nm yelp eu-make-debug-archive lp.cups xbrlapi alt-java arecord mbimcli aconnect gs reporter-ureport lpoptions hdsploader abrt-action-analyze-xorg boltctl gsbj abrt-action-notify aulastlog arecordmidi abrt-action-save-package-data alsa-delay gsdj abrt-handle-upload alsabat gslj abrt-watch-log lppasswd mixartloader abrt-action-analyze-oops ausyscall aseqdump abrt-action-save-kernel-data alsaloop gslp abrt-dump-oops lpq.cups usx2yloader abrt-action-analyze-vmcore auvirt aseqnet abrt-action-check-oops-for-hw-error lpr.cups vxloader abrt-merge-pstoreoops lprm.cups upower abrt-action-analyze-python alsamixer gsnd abrt-dump-xorg axfer abrt-cli alsatplg pphs abrt-retrace-client sealert iecset abrt-action-analyze-backtrace lpstat.cups stunbdc abrt-action-analyze-c oddjob_request stund abrt-action-analyze-ccpp-local cancel vncconfig abrt-action-analyze-core fprintd-delete vncpasswd abrt-action-analyze-vulnerability fprintd-enroll udisksctl abrt-action-generate-backtrace fprintd-list speaker-test abrt-action-generate-core-backtrace fprintd-verify analog abrt-action-install-debuginfo keytool instperf abrt-action-list-dsos cancel.cups rsync abrt-action-perform-ccpp-analysis pack200 liveinst abrt-action-trim-files alsaucm ppdc cairo-sphinx qemu-img pango-list rmiregistry pulseaudio pango-querymodules-64 qemu-io pango-view qemu-nbd glxgears chronyc glxinfo brltty glxinfo64 brltty-config xdriinfo alsaunmute ppdi xdg-user-dir servertool festival xdg-user-dirs-update amidi orca vmmouse_detect tnameserv saytime isdv4-serial-inputattach brltty-ctb xsetwacom brltty-install synclient brltty-trtxt syndaemon amixer eog gupnp-dlna-info-2.0 policytool text2wave gupnp-dlna-ls-profiles-2.0 festival_server_control osinfo-detect unpack200 ogg123 osinfo-install-script aplay sadf osinfo-query brltty-ttb aulast lpstat aplaymidi sar pinentry-gtk-2 ps2ascii telepathy-gabble-xmpp-console anaconda-cleanup imsettings-info ps2epsi anaconda-disable-nm-ibft-plugin canberra-boot festival_client festival_server metacity-message oggdec ibus-daemon oggenc ibus-setup ogginfo gpk-application vorbiscomment ibus-table-createdb cdda2ogg mutter vglserver_config cdda2wav gnome-session cdrdao gnome-session-quit cue2toc WebKitWebDriver toc2cddb gnome-help toc2cue gnome-keyring gsound-play gnome-keyring-3 pacat gnome-keyring-daemon pacmd file-roller pactl gnome-control-center padsp gnome-shell padsp-32 gdm-screenshot pamon gdmflexiserver paplay wnck-urgency-monitor parec dfu-tool parecord fwupdmgr pasuspender rhino paps pax11publish escputil espeak ijsgutenprint.5.2 clibrary evince clibrary2 pdfdetach vdo connection_recovery pdffonts ac sdp_long_message pdfimages at sdp_run_test evince-previewer spd-conf evince-thumbnailer spd-say dvipdf spdsend pdfinfo atq speech-dispatcher bluetooth-sendto atrm gdk-pixbuf-query-loaders-64 gpk-log ps2pdf gdk-pixbuf-thumbnailer eps2eps notify-send pdfseparate man appstream-compose pdftocairo tmon appstream-util ghostscript flatpak gpk-prefs ps2pdf12 gtk-update-icon-cache gsdj500 gtk-launch gnome-abrt ps2pdf13 gtk-query-immodules-3.0-64 lprsetup.sh gcr-viewer pdftohtml rvim canberra-gtk-play scp-dbus-service vim gtk-query-immodules-2.0-64 abrt-applet ps2pdf14 update-gtk-immodules pdf2dsc zenity pdf2ps report-gtk system-config-abrt delv gkbd-keyboard-display pdftoppm dig grilo-test-ui-0.3 pdftops host grl-inspect-0.3 pdftotext mdig grl-launch-0.3 pf2afm gjs-console pdfunite sudo sane-find-scanner pfbtopfa scanimage gpk-update-viewer btt nm-connection-editor gnome-terminal pinentry-gtk printafm pygtk-demo metacity wget gnome-session-custom-session gnome-session-inhibit gnome-session-properties gnome-session-selector gnome-shell-extension-prefs gnome-shell-extension-tool gnome-shell-perf-tool ps2pdfwr ps2ps ps2ps2 unix-lpr.sh gnome-calculator imsettings-list gnome-weather imsettings-reload firefox csh imsettings-switch gcm-viewer usb-devices purple-client-example gnome-disk-image-mounter purple-remote wvdial purple-send gnome-disks tcsh purple-send-async gnome-screenshot purple-url-handler vmware-user usbhid-dump gsf-office-thumbnailer wvdialconf tracker mmcli brasero vdodmeventd nautilus vmware-user-suid-wrapper nautilus-autorun-software xdg-user-dirs-gtk-update nautilus-desktop vdodumpconfig dpkg-deb vmware-vmblock-fuse xev lzma vdoforcerebuild cupstestdsc vdoformat cupstestppd vdoprepareupgrade ppdhtml vdoreadonly ppdmerge vdostats ppdpo setup gnome-boxes gnome-system-log cups-calibrate logview over hpcups-update-ppds nmtui hpijs nmtui-connect dpkg-divert baobab ed google-chrome mousetweaks red dpkg-statoverride nmtui-edit sushi firewall-config gnome-software gnome-dictionary gnome-tweaks start-pulseaudio-x11 chrome-gnome-shell gnome-system-monitor nano install-printerdriver gedit lastcomm system-config-printer mailq newaliases system-config-printer-applet nmtui-hostname vinagre on_ac_power charmap rsyslog-recover-qi.pl gnome-character-map pm-is-supported gucharmap locate seapplet cifsiostat time gnome-contacts updatedb dpkg dh iostat scl gnome-clocks mpstat rb gnome-font-viewer gnome-text-editor rx gnome-thumbnail-font seahorse rmail itweb-settings.itweb nfsiostat-sysstat javaws.itweb pidstat rz policyeditor.itweb javaws itweb-settings policyeditor ControlPanel tapestat sb gcm-calibrate spice-vdagent gcm-import lsusb gcm-inspect lsusb.py gcm-picker gcalccmd rngtest spice-streaming-agent mailq.postfix newaliases.postfix rmail.postfix sg_emc_trespass reporter-mailx sg_modes netstat sg_opcodes qemu-ga sg_persist batch sg_prevent stap-merge sg_raw stap-report sg_rbuf stapbpf sg_rdac stapdyn sg_read staprun sg_read_block_limits stapsh sg_read_buffer apropos sg_read_long catman sg_readcap lexgrog sg_reassign mandb sg_referrals manpath sg_requests whatis sg_format sx centrino-decode sg_reset cpupower sg_get_config powernow-k8-decode sg_rmsn turbostat sg_dd test_ppa x86_energy_perf_policy sg_rtpg vimdiff sg_safte vimtutor sg_sanitize nslookup sg_sat_identify nsupdate sg_sat_phy_event cvtsudoers sg_sat_set_features sudoedit sg_scan sudoreplay sg_senddiag pinfo sg_ses crash sg_get_lba_status nautilus-sendto sg_start blkiomon sg_stpg blkparse sg_ident sz blkrawverify sg_sync blktrace sg_test_rwbuf bno_plot.py sg_turs btrace sg_unmap btrecord sg_verify btreplay sg_inq cpp verify_blkparse sg_vpd edid-decode sg_wr_mode xdpyinfo sg_write_buffer xlsatoms sg_write_long xlsclients sg_write_same xlsfonts sg_xcopy xprop sginfo xvinfo sgm_dd xwininfo sgp_dd diffpp xvattr mkafmmap rnano sliceprint zenheiset states calibrate_ppa strace enscript nenscript sg_logs c89 rescan-scsi-bus.sh strace-log-merge scsi-rescan sg_luns c99 scsi_logging_level pbm2ppa scsi_mandat sg_map cc scsi_readcap detect_ppa scsi_ready pbmtpg scsi_satl pnm2ppa scsi_start tcptraceroute scsi_stop sg_map26 gcov scsi_temperature sg_decode_sense gcc sg_compare_and_write sg_copy_results scl_enabled scl_source svnrdump traceroute svnserve traceroute6 svnsync rdate svnversion setserial flex swig gcc-ar flex++ gcc-nm lex mosh gcc-ranlib libtool diffstat x86_64-redhat-linux-gcc combinediff m4 bison autoconf indent autoheader cifsdd autom4te dbwrap_tool autoreconf findsmb autoscan mvxattr autoupdate nmblookup ifnames oLschema2ldif stap regdiff stap-prep regpatch patch dehtmldiff dwz regshell k5srvutil regtree kadmin rpcclient kdestroy samba-regedit kinit sharesec klist smbcacls kpasswd editdiff ksu smbclient kswitch smbcquotas ktutil smbget kvno smbprint prove f95 gendiff smbspool aclocal aclocal-1.13 gfortran rpmspec espdiff automake automake-1.13 smbtar cgclassify smbtree cgcreate ctags cgdelete rpmsign cgexec cscope cgget cscope-indexer cgset ocs ctr cgsnapshot nfs4_editfacl lscgroup nfs4_getfacl lssubsys x86_64-redhat-linux-g++ certmaster-getcert nfs4_setfacl getcert byacc ipa-getcert c++ filterdiff local-getcert x86_64-redhat-linux-c++ selfsign-getcert yacc runc netaddr ci vgdb targetctl co pip3 ntpstat etags emacs sss_ssh_authorizedkeys libtoolize fixcvsdiff sss_ssh_knownhostsproxy intltool-update targetcli g++ ident git git-receive-pack git-upload-archive merge git-shell svn flipdiff git-upload-pack rcs spax autopoint rcsclean gettextize rcsdiff hesinfo grepdiff ipa svnadmin pax intltool-extract svndumpfilter intltool-merge svnlook GET intltool-prepare rcsfreeze intltoolize rcsmerge rpmbuild rlog HEAD fusermount-glusterfs interdiff lsdiff recountdiff rediff splitdiff unwrapdiff cifscreds getcifsacl setcifsacl ccache-swig doxygen dotlockfile ebrowse emacsclient etags.emacs gctags grep-changelog otfdump otflist otftobdf otfview animate compare composite conjure convert display identify import mogrify montage stream emacs-24.3 nvidia-xconfig nvidia-settings nvidia-bug-report.sh nvidia-installer nvidia-modprobe nvidia-smi nvidia-debugdump nvidia-cuda-mps-control nvidia-cuda-mps-server nvidia-persistenced nvidia-uninstall lwp-request mosh-client dtrace mosh-server xsubpp tclsh h2xs sem tclsh8.5 libnetcfg containerd podchecker sql containerd-shim perlivp docker instmodsh docker-init pod2latex gm docker-proxy cpan faac dockerd telnet subl callgrind_annotate foomatic-rip ab callgrind_control redhat_lsb_init cg_annotate lsb_release cg_diff fail2ban-python cg_merge fail2ban-regex ms_print fail2ban-server valgrind POST applyplugin valgrind-di-server lwp-download tmux valgrind-listener rarian-example ccmake rarian-sk-config xmbind rarian-sk-extract mwm rarian-sk-gen-uuid cmake lwp-dump uil easy_install-3.6 rarian-sk-get-cl pydoc3 rarian-sk-install pydoc3.6 rarian-sk-migrate python3 rarian-sk-preinstall pyvenv rarian-sk-rebuild pyvenv-3.6 podselect globus-makefile-header python3.6 python3.6m rarian-sk-update pip-3 scrollkeeper-config pip-3.6 fail2ban-client pip3.6 scrollkeeper-extract ed2k-link scrollkeeper-get-cl gost-hash scrollkeeper-install has160-hash scrollkeeper-update magnet-link system-config-users rhash resize sfv-hash koi8rxterm tiger-hash uxterm tth-hash lwp-mirror llc whirlpool-hash xterm ccmake3 zvbi-atsc-cc cmake3 analyseplugin cpack3 zvbi-chains ctest3 zvbi-ntsc-cc shasum ambiguous_words rubberband zbarcam rarian-sk-get-content-list scrollkeeper-get-toc-from-id lli rarian-sk-get-extended-content-list bs2bconvert zbarimg rarian-sk-get-scripts bs2bstream vulkaninfo scrollkeeper-gen-seriesid scrollkeeper-preinstall opt scrollkeeper-get-content-list listplugins openal-info lldb scrollkeeper-get-extended-content-list scrollkeeper-rebuilddb pigz scrollkeeper-get-index-from-docpath scrollkeeper-uninstall VBox scrollkeeper-get-toc-from-docpath wordlist2dawg hp-align hp-clean hp-colorcal hp-devicesettings hp-diagnose_plugin hp-diagnose_queues hp-doctor hp-fab hp-faxsetup hp-firmware hp-info hp-levels hp-linefeedcal hp-logcapture hp-makecopies hp-makeuri hp-plugin hp-pqdiag hp-printsettings hp-probe hp-query hp-scan hp-sendfax hp-setup hp-testpage hp-timedate hp-unload hp-wificonfig rapper roqet rdfproc redland-db-upgrade libreoffice ooffice ooviewdoc openoffice.org soffice unopkg lp_solve oocalc rclone globus-domainname globus-hostname chardetect-3.4 globus-sh-exec htpasswd nmap globus-version htdigest gsissh-keygen httxt2dbm grid-cert-info logresolve grid-cert-request globus-connect-server-id-cleanup grid-change-pass-phrase jackd gsiscp jackrec gsisftp dpkg-query gsissh classifier_tester grid-ca-create globus-connect-server-setup grid-ca-package cockpit-bridge grid-ca-sign python3.4 scgcheck grid-cert-diagnostics cntraining grid-proxy-destroy combine_tessdata grid-proxy-info dawg2wordlist grid-proxy-init python3.4m scgskeleton myproxy-change-pass-phrase mftraining myproxy-destroy globus-connect-server-id-setup myproxy-get-delegation easy_install-3.4 myproxy-get-trustroots tesseract myproxy-info set_unicharset_properties myproxy-init shapeclustering myproxy-logon unicharset_extractor myproxy-retrieve text2image myproxy-store opencv_createsamples globus-url-copy dpkg-split pydoc3.4 lli-child-target pyvenv-3.4 opencv_haartraining htdbm cdda2mp3 globus-connect-server-io-cleanup globus-connect-server-io-setup vboxbugreport dpkg-source globus-connect-server-web-cleanup links debconf globus-connect-server-web-setup vboxheadless debconf-communicate globus-connect-server-cleanup vboxmanage opencv_performance vboxsdl opencv_traincascade vglclient vglconfig vglconnect vglgenkey vgllogin vglrun debconf-copydb vglxinfo vboxwebsrv chardetect-3 virtualbox chardetect-3.6 debconf-escape vboxdtrace virtualboxvm libpng-config links2 libpng15-config ndiff freetype-config dpkg-vendor finger bugpoint debconf-show llvm-ar debconf-updatepo llvm-as mkhybrid llvm-bcanalyzer htmltree llvm-cov debconf-gettextize llvm-diff podebconf-report-po llvm-dis qdbus llvm-dwarfdump nping llvm-extract po2debconf llvm-link podebconf-display-po llvm-mc dpkg-trigger llvm-mcmarkup lzcmp llvm-nm google-chrome-stable llvm-objdump lzcat llvm-ranlib dpkg-maintscript-helper llvm-readobj lzdiff llvm-rtdyld lzegrep llvm-size lzfgrep llvm-stress html2text llvm-symbolizer lzgrep llvm-tblgen lzless macho-dump python-html2text lldb-platform lzmainfo ascii-xfr lzmadec minicom lzmore runscript unlzma xminicom dpkg-buildflags unpigz dpkg-architecture dos2unix dpkg-buildpackage mac2unix dpkg-checkbuilddeps unix2dos dpkg-distaddfile unix2mac python3-html2text VBoxAutostart mimedump VBoxBalloonCtrl mimeencode VBoxBugReport dpkg-genbuildinfo VBoxDTrace mimeexplode VBoxHeadless dpkg-genchanges VBoxManage dpkg-gencontrol VBoxSDL dpkg-gensymbols VBoxTunctl dpkg-mergechangelogs VBoxVRDP dpkg-parsechangelog VirtualBox mimesend VirtualBoxVM mimepostcard rdesktop-vrdp dpkg-name vbox-img debconf-apt-progress vboxautostart vboxballoonctrl vboximg-mount debconf-set-selections dh_ucf dpkg-scanpackages dh_update_autotools_config dpkg-scansources dh_usrlocal dpkg-shlibdeps alien dh_auto_build vdo-by-dev dh_auto_clean page_owner_sort dh_auto_configure slabinfo dh_auto_install targetclid dh_auto_test dh_bugfiles dh_builddeb dh_clean dh_compress dh_dwz dh_fixperms dh_gconf dh_gencontrol dh_icons dh_install dh_installcatalogs dh_testdir dh_installchangelogs dh_installcron dh_installdeb dh_installdebconf dh_installdirs dh_installdocs dh_installemacsen dh_installexamples dh_installgsettings dh_installifupdown dh_installinfo dh_installinit dh_installinitramfs dh_installlogcheck dh_installlogrotate dh_installman dh_installmanpages dh_installmenu dh_installmime dh_installmodules dh_installpam dh_installppp dh_installsystemd dh_installudev dh_installwm dh_installxfonts dh_link dh_lintian dh_listpackages dh_makeshlibs dh_md5sums dh_missing dh_movefiles dh_perl dh_prep dh_shlibdeps dh_strip dh_systemd_enable dh_systemd_start dh_testroot /usr/local/sbin: /usr/sbin: iptables-restore lid build-locale-archive cache_writeback zdump mkdict zic era_check ldconfig packer sln iptables-save pwck glibc_post_upgrade.x86_64 era_dump arpd faillock iconvconfig iconvconfig.x86_64 xtables-multi sefcontext_compile cbq pam_tally2 install-info era_invalidate chkconfig bridge vigr alternatives rtacct vipw update-alternatives era_restore capsh pdata_tools getcap thin_check getpcaps thin_delta setcap thin_dump biosdecode thin_ls dmidecode thin_metadata_size ownership thin_repair vpddecode thin_restore mount.fuse thin_rmap fuser thin_trim cgdisk key.dns_resolver fixparts request-key gdisk safe_finger sgdisk routel fsck genl-ctrl-list rtmon mkfs nl-class-add rtpr unix_chkpwd nl-class-delete rtstat halt nl-class-list ss unix_update nl-classid-lookup tcpd init nl-cls-add tc badblocks nl-cls-delete tcpdmatch nl-cls-list iw debugfs nl-link-list ipset ifup nl-pktloc-lookup cache_check chat nl-qdisc-add cache_dump pppd nl-qdisc-delete cache_metadata_size nl-qdisc-list try-from killall5 avcstat pidof getenforce dosfsck getsebool dosfslabel matchpathcon fatlabel selabel_digest fsck.fat selabel_lookup fsck.msdos selinux_restorecon fsck.vfat selinuxconlist mkdosfs selinuxdefcon mkfs.fat selinuxenabled mkfs.msdos selinuxexeccon mkfs.vfat lsof quot ethtool setenforce ip6tables cache_repair lvm ip6tables-restore cache_restore ip6tables-save paperconfig iptables ctstat chroot devlink cracklib-format genl sasldblistusers2 ifcfg saslpasswd2 ifstat dumpe2fs ip cracklib-check lnstat cracklib-packer nstat cracklib-unpacker rdma create-cracklib-dict routef selabel_lookup_best_match hardlink zramctl selabel_partial_match yum-complete-transaction mkhomedir_helper sgpio lvs pam_console_apply brctl pvck pam_timestamp_check adduser pvs pwhistory_helper userdel e2freefrag usermod e2image addpart e2undo agetty e4defrag blkdiscard filefrag blkid logsave chgpasswd vgck mklost+found blockdev resize2fs cfdisk luseradd luserdel addgnupghome sysctl e2fsck fsck.ext2 fsck.ext3 fsck.ext4 gpartedbin chpasswd vgs e2label tune2fs lgroupdel lnewusers chcpu yumdb kpartx mke2fs mkfs.ext2 mkfs.ext3 mkfs.ext4 clock fsck.xfs ctrlaltdel mkfs.xfs delpart xfs_admin fdformat xfs_bmap fdisk xfs_copy findfs xfs_db groupadd lpc xfs_estimate fsck.cramfs xfs_freeze fsck.minix xfs_fsr fsfreeze xfs_growfs fstrim xfs_info hwclock xfs_io groupdel tcsd xfs_logprint groupmems gdm xfs_mdrestore groupmod sshd xfs_metadump ldattach xfs_mkfile losetup xfs_ncheck mkfs.cramfs xfs_quota mkfs.minix xfs_repair mkswap xfs_rtcp nologin gluster partx grubby grpck lshw installkernel grpconv sa new-kernel-pkg pivot_root btrfs grpunconv rngd btrfs-convert newusers arp btrfs-debug-tree grub2-get-kernel-settings btrfs-find-root readprofile btrfs-image pwconv crda btrfs-map-logical pwunconv atd btrfs-select-super useradd mtr btrfs-zero-log resizepart btrfsck rtcwake btrfstune runuser fsck.btrfs sfdisk mkfs.btrfs sulogin pethtool swaplabel pifconfig swapoff sosreport swapon logrotate switch_root lchage wipefs lgroupadd lgroupmod lpasswd lusermod applygnupgdefaults ntpd blkdeactivate dmfilemapd dmsetup dmstats dracut depmod insmod lsmod modinfo modprobe rmmod weak-modules poweroff reboot runlevel shutdown telinit udevadm parted partprobe grub2-sparc64-setup grub2-set-default raid-check ntpq grub2-setpassword makedumpfile fixfiles mdmon sssd genhomedircon mkdumprd load_policy vmcore-dmesg restorecon convertquota semodule edquota sestatus quotacheck setfiles quotaoff setsebool quotaon iscsiuio quotastats iscsi-iname repquota iscsiadm rpc.rquotad iscsid setquota iscsistart xqmstats anacron firewalld crond fsadm arping lvchange clockdiff lvconvert ifenslave lvcreate ping6 lvdisplay rdisc lvextend tracepath lvmconf tracepath6 lvmconfig consoletype lvmdiskscan genhostid lvmdump ifdown lvmetad netreport lvmpolld ppp-watch lvmsadc service lvmsar sushell ebtables dkms sys-unconfig lvreduce usernetctl grub2-ofpathname plymouth-set-default-theme lvremove plymouthd lvrename authconfig ebtables-restore authconfig-tui ebtables-save cacertdir_rehash lvresize dmeventd lvscan lspci pvchange setpci semanage update-pciids pvcreate rdma-ndd pvdisplay eapol_test pvmove wpa_cli lockdev wpa_passphrase pppdump wpa_supplicant pppoe-discovery NetworkManager pvremove rpcbind pvresize rpcinfo pppstats grub2-bios-setup userhelper grub2-install dhclient grub2-macbless kexec grub2-mkconfig pvscan grub2-probe dhclient-script grub2-reboot abrt-harvest-pstoreoops grub2-rpm-sort vgcfgbackup mdadm vgcfgrestore vgchange vgconvert vgcreate vgdisplay vgexport vgextend vgimport vgimportclone vgmerge vgmknodes vgreduce vgremove vgrename vgscan vgsplit mpathconf dm_dso_reg_tool dmevent_tool dmraid dmraid.static hypervvssd hypervkvpd hypervfcopyd dcbtool lldpad lldptool vdptool pluginviewer saslauthd testsaslauthd abrt-auto-reporting abrt-server abrtd abrt-configuration abrt-dbus abrt-harvest-vmcore sendmail smartctl abrt-install-ccpp-hook fcoemon dnsmasq fcping audispd fcrls auditctl fipvlan auditd skdump augenrules sktest aureport umount.udisks2 ausearch cryptsetup autrace anaconda sedispatch mpathpersist setroubleshootd handle-sshpw oddjobd liveinst realm multipath usb_modeswitch virtlogd dump-acct usb_modeswitch_dispatcher virt-what lpc.cups saned rtkitctl cups-browsed alsa-info multipathd alsa-info.sh fcnsq alsabat-test.sh accept alsactl cupsaccept chronyd cupsaddsmb radvd cupsctl radvdump cupsd ksmtuned fcoeadm unbound-anchor cupsdisable ipsec cupsenable gssproxy cupsfilter mount.nfs cupsreject mount.nfs4 lpadmin osd_login lpinfo rpc.statd lpmove umount.nfs reject umount.nfs4 cups-genppd.5.2 blkmapd cups-genppdupdate exportfs firstboot mountstats rsyslogd nfsdcltrack tuned nfsidmap tuned-adm nfsiostat ModemManager nfsstat setup rpc.gssd sshd-keygen rpc.idmapd pm-hibernate rpc.mountd pm-powersave rpc.nfsd pm-suspend rpcdebug pm-suspend-hybrid showmount avahi-daemon sm-notify spice-vdagentd start-statd ras-mc-ctl fxload rasdaemon libvirtd accton virtlockd usbmuxd dump-utmp pm-utils-bugreport-info.sh postalias postcat postconf postdrop postfix postkick postlock postlog postmap postmulti postqueue postsuper sendmail.postfix smtp-sink smtp-source gfs-dynbe-client smartd globus-update-certificate-dir update-smart-drivedb gfs-gfork-master irqbalance fcgistarter mcelog apachectl biosdevname cifs.idmap intel-microcode2ucode rotatelogs ether-wake htcacheclean ifconfig httpd ipmaddr suexec iptunnel mksquashfs mii-diag myproxy-oauth-setup mii-tool remotectl nameif zvbid plipconfig unsquashfs route gss-server slattach sim_server regdbdump mount.cifs setregdomain uuserver atrun rcvboxweb-service ntpdate rscsi ledctl rcvboxdrv ledmon vboxconfig kpatch dpkg-preconfigure tcpdump start-stop-daemon tcpslice dpkg-reconfigure accessdb iprconfig iprdbg iprdump iprinit iprsos iprupdate visudo xfsdump xfsinvutil xfsrestore ntsysv efibootmgr bpftool rfkill cgclear redhat_lsb_trigger.x86_64 cgconfigparser cgrulesengd certmonger ntp-keygen ntpdc ntptime tickadj sss_cache automount globus-libc-hostname ipa-certupdate cifs.upcall ipa-client-automount globus-redia ipa-client-install myproxy-server ipa-getkeytab ipa-join grid-default-ca ipa-rmkeytab cgdcbxd adcli grid-mapfile-add-entry mount.glusterfs glusterfs glusterfsd grid-mapfile-check-consistency grid-mapfile-delete-entry globus-gridftp-password globus-gridftp-server globus-gridftp-server-enable-sshftp globus-gridftp-server-setup-chroot rcvboxballoonctrl-service rcvboxautostart-service ============================================================================================= TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:951) child config.utilities.macosFirewall 0.000004 ============================================================================================= TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Executing: uname -s stdout: Linux Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/gdb...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/gdb...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/gdb...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/gdb...not found Checking for program /share/apps/gmake-4.3/bin/gdb...not found Checking for program /home/blaise/bin/gdb...not found Checking for program /usr/lib64/qt-3.3/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Defined "USE_DEBUGGER" to ""gdb"" Executing: uname -s stdout: Linux Defined make macro "DSYMUTIL" to "true" Executing: uname -s stdout: Linux child config.utilities.debuggers 0.044773 ============================================================================================= TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 0 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 14 #define PETSC_VERSION_SUBMINOR 1 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir 0.007698 ============================================================================================= TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath 0.002533 ============================================================================================= TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/git...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/git...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/git...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/git...not found Checking for program /share/apps/gmake-4.3/bin/git...not found Checking for program /home/blaise/bin/git...not found Checking for program /usr/lib64/qt-3.3/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Executing: git --version stdout: git version 1.8.3.1 ============================================================================================= TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/hg...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/hg...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/hg...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/hg...not found Checking for program /share/apps/gmake-4.3/bin/hg...not found Checking for program /home/blaise/bin/hg...not found Checking for program /usr/lib64/qt-3.3/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /usr/local/sbin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/hg...not found child config.sourceControl 0.021272 ============================================================================================= TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) lib/petsc/bin/maint exists. This appears to be a repository clone .git directory exists Executing: ['git', 'describe', '--match=v*'] stdout: v3.14.1-290-g71f558e Executing: ['git', 'log', '-1', '--pretty=format:%H'] stdout: 71f558e36f6a1136215f81db00f11fcd52130482 Executing: ['git', 'log', '-1', '--pretty=format:%ci'] stdout: 2020-12-02 22:37:57 -0600 Executing: ['git', 'rev-parse', '--abbrev-ref', 'HEAD'] stdout: master Defined "VERSION_GIT" to ""v3.14.1-290-g71f558e"" Defined "VERSION_DATE_GIT" to ""2020-12-02 22:37:57 -0600"" Defined "VERSION_BRANCH_GIT" to ""master"" child PETSc.options.petscclone 0.158631 ============================================================================================= TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ============================================================================================= TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set No previous hashfile found Setting hashfile: sowing-test/lib/petsc/conf/configure-hash Deleting configure hash file: sowing-test/lib/petsc/conf/configure-hash Unable to delete configure hash file: sowing-test/lib/petsc/conf/configure-hash child PETSc.options.arch 0.189490 ============================================================================================= TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:39) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/share/apps/petsc-master/sowing-test" ============================================================================================= TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:85) ============================================================================================= TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:78) ============================================================================================= TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:62) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /share/apps/petsc-master/sowing-test/lib/petsc/conf ============================================================================================= TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:98) child PETSc.options.installDir 0.009928 ============================================================================================= TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ============================================================================================= TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir 0.001427 ============================================================================================= TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" Defined make macro "CLANGUAGE" to "C" child PETSc.options.languages 0.001760 ============================================================================================= TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1868) ============================================================================================= TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1898) ============================================================================================= TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1838) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ============================================================================================= TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1859) OpenMPI wrappers require LD_LIBRARY_PATH set ============================================================================================= TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:479) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized HIPCCFLAGS to Initialized HIPCCFLAGS to Initialized LDFLAGS to Initialized SYCLCXXFLAGS to Initialized SYCLCXXFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized HIPPPFLAGS to -Wno-deprecated-gpu-targets Initialized SYCLPPFLAGS to -Wno-deprecated-gpu-targets Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized HIPCC_LINKER_FLAGS to [] Initialized SYCLCXX_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ============================================================================================= TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:654) Locate a functional C compiler Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc...found Defined make macro "CC" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Testing executable /tmp/petsc-jcc9mra8/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc --version stdout: icc (ICC) 19.1.2.254 20200623 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. Since MPI c compiler starts with mpi, force searches for other compilers to only look for MPI compilers ============================================================================================= TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:693) Locate a functional C preprocessor Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc...found Defined make macro "CPP" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : ============================================================================================= TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:729) Locate a functional CUDA compiler Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/nvcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/nvcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/nvcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/nvcc...not found Checking for program /share/apps/gmake-4.3/bin/nvcc...not found Checking for program /home/blaise/bin/nvcc...not found Checking for program /usr/lib64/qt-3.3/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /usr/local/sbin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/nvcc...not found Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of the specific search path Warning accessing /Developer/NVIDIA/CUDA-6.5/bin gives errors: must be str, not builtin_function_or_method Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of the specific search path Warning accessing /usr/local/cuda/bin gives errors: must be str, not builtin_function_or_method ============================================================================================= TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:769) Locate a functional CUDA preprocessor ============================================================================================= TESTING: checkHIPCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:803) Locate a functional HIP compiler Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/hipcc...not found Checking for program /share/apps/gmake-4.3/bin/hipcc...not found Checking for program /home/blaise/bin/hipcc...not found Checking for program /usr/lib64/qt-3.3/bin/hipcc...not found Checking for program /usr/local/bin/hipcc...not found Checking for program /usr/bin/hipcc...not found Checking for program /usr/local/sbin/hipcc...not found Checking for program /usr/sbin/hipcc...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/hipcc...not found Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/opt/rocm/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/opt/rocm/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/opt/rocm/bin/hipcc...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/opt/rocm/bin/hipcc...not found Checking for program /share/apps/gmake-4.3/bin/opt/rocm/bin/hipcc...not found Checking for program /home/blaise/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/lib64/qt-3.3/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/local/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/local/sbin/opt/rocm/bin/hipcc...not found Checking for program /usr/sbin/opt/rocm/bin/hipcc...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/opt/rocm/bin/hipcc...not found ============================================================================================= TESTING: checkHIPPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:839) Placeholder for now ============================================================================================= TESTING: checkSYCLCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:860) Locate a functional SYCL compiler ============================================================================================= TESTING: checkSYCLPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:886) Placeholder for now ============================================================================================= TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:973) Locate a functional Cxx compiler Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc...found Defined make macro "CXX" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Testing executable /tmp/petsc-jcc9mra8/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc --version stdout: icpc (ICC) 19.1.2.254 20200623 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. ============================================================================================= TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1014) Locate a functional Cxx preprocessor Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc...found Defined make macro "CXXPP" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -E -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Preprocess stderr before filtering: : Preprocess stderr after filtering: : ============================================================================================= TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1113) Locate a functional Fortran compiler Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort...found Defined make macro "FC" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Testing executable /tmp/petsc-jcc9mra8/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort --version stdout: ifort (IFORT) 19.1.2.254 20200623 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. ============================================================================================= TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1150) Locate a functional Fortran preprocessor Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort...found Defined make macro "FPP" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -E" Deleting "FPP" Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort...found Defined make macro "FPP" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort --use cpp32" Deleting "FPP" ============================================================================================= TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1172) Make sure fortran comment "!" works ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ============================================================================================= TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1307) ============================================================================================= TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1406) Check that the archiver exists and can make a library usable by the compiler Executing: ar -V stdout: GNU ar version 2.27-44.base.el7 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar version 2.27-44.base.el7 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/ar...not found Checking for program /share/apps/gmake-4.3/bin/ar...not found Checking for program /home/blaise/bin/ar...not found Checking for program /usr/lib64/qt-3.3/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/ranlib...not found Checking for program /share/apps/gmake-4.3/bin/ranlib...not found Checking for program /home/blaise/bin/ranlib...not found Checking for program /usr/lib64/qt-3.3/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /tmp/petsc-jcc9mra8/config.setCompilers/libconf1.a /tmp/petsc-jcc9mra8/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /tmp/petsc-jcc9mra8/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: invalid option -- 'c' Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar version 2.27-44.base.el7 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar version 2.27-44.base.el7 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/ar...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/ar...not found Checking for program /share/apps/gmake-4.3/bin/ar...not found Checking for program /home/blaise/bin/ar...not found Checking for program /usr/lib64/qt-3.3/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/ranlib...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/ranlib...not found Checking for program /share/apps/gmake-4.3/bin/ranlib...not found Checking for program /home/blaise/bin/ranlib...not found Checking for program /usr/lib64/qt-3.3/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /tmp/petsc-jcc9mra8/config.setCompilers/libconf1.a /tmp/petsc-jcc9mra8/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /tmp/petsc-jcc9mra8/config.setCompilers/libconf1.a ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -L/tmp/petsc-jcc9mra8/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ============================================================================================= TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1521) Check that the linker can produce shared libraries Executing: uname -s stdout: Linux Checking shared linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc using flags ['-shared'] Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc...found Defined make macro "LD_SHARED" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc" Trying C compiler flag Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -shared /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: ld: /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o: relocation R_X86_64_PC32 against symbol `__intel_new_feature_proc_init' can not be used when making a shared object; recompile with -fPIC ld: final link failed: Bad value Rejecting linker flag -shared due to nonzero status from link ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' Rejected C compiler flag because it was not compatible with shared linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc using flags ['-shared'] Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc --help | head -n 20 stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file Trying C compiler flag -PIC Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -PIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: icc: command line warning #10006: ignoring unknown option '-PIC' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to icc: command line warning #10006: ignoring unknown option '-PIC' Rejected C compiler flag -PIC because it was not compatible with shared linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc using flags ['-shared'] Trying C compiler flag -fPIC Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Valid C linker flag -shared ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -L/tmp/petsc-jcc9mra8/config.setCompilers -lconftest Using shared linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc with flags ['-shared'] and library extension so Executing: uname -s stdout: Linux Executing: uname -s stdout: Linux ============================================================================================= TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1250) Determine the PIC option for each compiler Trying Cxx for PIC code without any compiler flag Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: ld: /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o: relocation R_X86_64_32 against `.rodata.str1.4' can not be used when making a shared object; recompile with -fPIC ld: final link failed: Nonrepresentable section on output Rejected Cxx compiler flag because shared linker cannot handle it Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc --help | head -n 20 stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file Trying Cxx compiler flag -PIC for PIC code Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -PIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Possible ERROR while running compiler: stderr: icpc: command line warning #10006: ignoring unknown option '-PIC' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to icpc: command line warning #10006: ignoring unknown option '-PIC' Rejected Cxx compiler flag -PIC because shared linker cannot handle it Trying Cxx compiler flag -fPIC for PIC code Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -fPIC ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Accepted Cxx compiler flag -fPIC for PIC code Trying FC for PIC code without any compiler flag Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: function foo(a) real:: a,x,bar common /xx/ x x=a foo = bar(x) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: ld: /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o: relocation R_X86_64_32 against undefined symbol `xx_' can not be used when making a shared object; recompile with -fPIC ld: final link failed: Nonrepresentable section on output Rejected FC compiler flag because shared linker cannot handle it Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort --help | head -n 20 stdout: Intel(R) Fortran Compiler Help ============================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: ifort [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a Fortran source (.f .for .ftn .f90 .fpp .F .FOR .F90 .i .i90), assembly (.s .S), object (.o), static library (.a), or other linkable file Trying FC compiler flag -PIC for PIC code Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -PIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Possible ERROR while running compiler: stderr: ifort: command line warning #10006: ignoring unknown option '-PIC' Source: program main end Rejecting compiler flag -PIC due to ifort: command line warning #10006: ignoring unknown option '-PIC' Rejected FC compiler flag -PIC because shared linker cannot handle it Trying FC compiler flag -fPIC for PIC code Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Added FC compiler flag -fPIC ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: function foo(a) real:: a,x,bar common /xx/ x x=a foo = bar(x) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Accepted FC compiler flag -fPIC for PIC code ============================================================================================= TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1633) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Executing: uname -s stdout: Linux Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -V Trying C linker flag -Wl,-rpath, Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -Wl,-rpath,/share/apps/petsc-master -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/share/apps/petsc-master Executing: uname -s stdout: Linux Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -V Trying Cxx linker flag -Wl,-rpath, Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -Wl,-rpath,/share/apps/petsc-master /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/share/apps/petsc-master Executing: uname -s stdout: Linux Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -V Trying FC linker flag -Wl,-rpath, Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -Wl,-rpath,/share/apps/petsc-master -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/share/apps/petsc-master ============================================================================================= TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1672) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o Shared linking does not require an explicit libc reference ============================================================================================= TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1718) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.libraries -fPIC /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC /tmp/petsc-jcc9mra8/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc using flags ['-shared'] Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc...found Defined make macro "DYNAMICLINKER" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -ldl Valid C linker flag -shared ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { void *handle = dlopen("/tmp/petsc-jcc9mra8/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -ldl Using dynamic linker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc with flags ['-shared'] and library extension so ============================================================================================= TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1767) Output module data as defines and substitutions Substituting "CC" with "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc" Substituting "CFLAGS" with " -fPIC" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc" Substituting "CXX_CXXFLAGS" with " -fPIC" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXPP" with "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -E" Substituting "CXXPPFLAGS" with "" Substituting "FC" with "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort" Substituting "FFLAGS" with " -fPIC" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-shared" child config.setCompilers 13.534703 ============================================================================================= TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:31) ============================================================================================= TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:47) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Executing: uname -s stdout: Linux Defined make rule "shared_arch" with dependencies "shared_linux" and code [] Defined make macro "SONAME_FUNCTION" to "$(1).so.$(2)" Defined make macro "SL_LINKER_FUNCTION" to "-shared -Wl,-soname,$(call SONAME_FUNCTION,$(notdir $(1)),$(2))" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -v stdout: mpiicc for the Intel(R) MPI Library 2019 Update 8 for Linux* Copyright 2003-2020, Intel Corporation. Defined make macro "BUILDSHAREDLIB" to "yes" Defined "USE_SHARED_LIBRARIES" to "1" ============================================================================================= TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:92) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ============================================================================================= TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:98) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries child PETSc.options.sharedLibraries 0.103336 ============================================================================================= TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:39) Defined make macro "PETSC_INDEX_SIZE" to "32" child PETSc.options.indexTypes 0.001818 ============================================================================================= TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:81) Get the default compiler flags Defined make macro "C_VERSION" to "icc (ICC) 19.1.2.254 20200623" Defined make macro "MPICC_SHOW" to "icc -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread" Defined make macro "MPICC_SHOW" to "icc -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread" Trying C compiler flag -g Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -g Defined make macro "Cxx_VERSION" to "icpc (ICC) 19.1.2.254 20200623" Defined make macro "MPICXX_SHOW" to "icpc -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpicxx -lmpifort -lmpi -ldl -lrt -lpthread" Defined make macro "MPICXX_SHOW" to "icpc -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpicxx -lmpifort -lmpi -ldl -lrt -lpthread" Trying Cxx compiler flag -g Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -g -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -g Defined make macro "FC_VERSION" to "ifort (IFORT) 19.1.2.254 20200623" Defined make macro "MPIFC_SHOW" to "ifort -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread" Defined make macro "MPIFC_SHOW" to "ifort -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread" Trying FC compiler flag -g Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Added FC compiler flag -g child config.compilerFlags 2.024152 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc --help | head -n 20 stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file ============================================================================================= TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1416) Check for -std=c99 or equivalent flag Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c(11): error: expected an expression for (int i=0; i<2; i++){ ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c(11): error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ compilation aborted for /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c(11): error: expected an expression for (int i=0; i<2; i++){ ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c(11): error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ compilation aborted for /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c (code 2) PETSc Error: No output file produced Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: -std=c99 ============================================================================================= TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:156) Check for the C/CXX restrict keyword Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -V ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set C restrict keyword to __restrict Defined "C_RESTRICT" to "__restrict" ============================================================================================= TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:411) Activate format string checking if using the GNU compilers ============================================================================================= TESTING: checkCInline from config.compilers(config/BuildSystem/config/compilers.py:126) Check for C inline keyword ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C Inline keyword to inline Defined "C_INLINE" to "inline" ============================================================================================= TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:422) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY);dlopen(libname, RTLD_NOW);dlopen(libname, RTLD_LOCAL);dlopen(libname, RTLD_GLOBAL); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Defined "HAVE_RTLD_NOW" to "1" Defined "HAVE_RTLD_LOCAL" to "1" Defined "HAVE_RTLD_GLOBAL" to "1" ============================================================================================= TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:220) Determines the libraries needed to link with C compiled code ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -ldl C libraries are not needed when using Fortran linker ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.compilers/conftest -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -ldl C libraries are not needed when using C++ linker ============================================================================================= TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1367) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Defined make macro "C_DEPFLAGS" to "-MMD -MP" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -MMD -MP -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Trying Cxx compiler flag -MMD -MP Defined make macro "CXX_DEPFLAGS" to "-MMD -MP" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -g -fPIC -MMD -MP /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc --help | head -n 20 stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file ============================================================================================= TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:156) Check for the C/CXX restrict keyword Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -V ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set Cxx restrict keyword to __restrict Defined "CXX_RESTRICT" to "__restrict" ============================================================================================= TESTING: checkCxxDialect from config.compilers(config/BuildSystem/config/compilers.py:469) Determine the Cxx dialect supported by the compiler [and correspoding compiler option - if any]. -with-cxx-dialect can take options: auto: use highest dialect configure can determine cxx17: [future?] cxx14: gnu++14 or c++14 cxx11: gnu++11 or c++11 0: disable CxxDialect check and use compiler default checkCxxDialect: checking CXX14 with flag: Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 2 stderr: In file included from /usr/include/c++/4.8.5/random(35), from /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(4): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(23): warning #12: parsing restarts here after previous syntax error /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(23): error: expected a ";" compilation aborted for /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc (code 2) Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; constexpr std::complex I(0.0,1.0); auto lambda = [](auto x, auto y) {return x + y;}; return lambda(3,4); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to In file included from /usr/include/c++/4.8.5/random(35), from /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(4): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(23): warning #12: parsing restarts here after previous syntax error /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc(23): error: expected a ";" compilation aborted for /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc (code 2) PETSc Error: No output file produced checkCxxDialect: checking CXX14 with flag: -std=c++14 Defined "HAVE_CXX_DIALECT_CXX14" to "1" Defined "HAVE_CXX_DIALECT_CXX11" to "1" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -std=c++14 -fPIC /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; constexpr std::complex I(0.0,1.0); auto lambda = [](auto x, auto y) {return x + y;}; return lambda(3,4); ; return 0; } ============================================================================================= TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:441) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } ============================================================================================= TESTING: checkCxxInline from config.compilers(config/BuildSystem/config/compilers.py:141) Check for C++ inline keyword ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx Inline keyword to inline Defined "CXX_INLINE" to "inline" ============================================================================================= TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:553) Determines the libraries needed to link with C++ from C and Fortran ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -ldl C++ libraries are not needed when using C linker ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `asub()': /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `__cxa_allocate_exception' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `typeinfo for int' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `__cxa_throw' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `__cxa_begin_catch' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `std::cout' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `__cxa_end_catch' /tmp/petsc-jcc9mra8/config.compilers/conftest.cc:7: undefined reference to `__cxa_end_catch' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `__sti__$E': /usr/include/c++/4.8.5/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/include/c++/4.8.5/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `std::allocator::allocator()': /usr/include/c++/4.8.5/bits/allocator.h:113: undefined reference to `__cxa_call_unexpected' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `std::allocator::~allocator()': /usr/include/c++/4.8.5/bits/allocator.h:121: undefined reference to `__cxa_call_unexpected' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `std::_Vector_base >::~_Vector_base()': /usr/include/c++/4.8.5/bits/stl_vector.h:160: undefined reference to `__cxa_call_unexpected' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `std::vector >::~vector()': /usr/include/c++/4.8.5/bits/stl_vector.h:415: undefined reference to `__cxa_call_unexpected' /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `__gnu_cxx::new_allocator::deallocate(int*, unsigned long)': /usr/include/c++/4.8.5/ext/new_allocator.h:110: undefined reference to `operator delete(void*)' /tmp/petsc-jcc9mra8/config.compilers/confc.o:(.data.DW.ref._ZTIi[DW.ref._ZTIi]+0x0): undefined reference to `typeinfo for int' /tmp/petsc-jcc9mra8/config.compilers/confc.o:(.gnu.linkonce.d.DW.ref.__gxx_personality_v0+0x0): undefined reference to `__gxx_personality_v0' Executing: uname -s stdout: Linux ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -lstdc++ -ldl compilers: C++ requires -lstdc++ to link with FC compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -V ============================================================================================= TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:860) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS Testing Fortran mangling type underscore with code void d1chk_(void){return;} ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -lstdc++ -ldl compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort --version stdout: ifort (IFORT) 19.1.2.254 20200623 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. Defined "FORTRAN_CHARLEN_T" to "int" ============================================================================================= TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:898) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main call d1_chk() end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.compilers/conftest.o: In function `MAIN__': /tmp/petsc-jcc9mra8/config.compilers/conftest.F90:2: undefined reference to `d1_chk_' ============================================================================================= TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:908) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main #include call MPI_Allreduce() end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o -lstdc++ -ldl ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() print*,'testing' call MPI_Allreduce() return end ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern void asub_(void); int main(int argc,char **args) { asub_(); return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.compilers/confc.o: In function `asub_': /tmp/petsc-jcc9mra8/config.compilers/conftest.F90:2: undefined reference to `for_write_seq_lis' Fortran code cannot directly be linked with C linker, therefore will determine needed Fortran libraries Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -v -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o -lstdc++ -ldl stdout: mpiifort for the Intel(R) MPI Library 2019 Update 8 for Linux* Copyright 2003-2020, Intel Corporation. Possible ERROR while running linker: stdout: mpiifort for the Intel(R) MPI Library 2019 Update 8 for Linux* Copyright 2003-2020, Intel Corporation.stderr: ifort version 19.1.2.254 /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/fortcom -mGLOB_em64t=TRUE -mP1OPT_version=19.1-intel64 -mGLOB_diag_file=/tmp/petsc-jcc9mra8/config.compilers/conftest.diag -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mGLOB_pack_sort_init_list -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=485 "-mGLOB_options_string=-I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include -o /tmp/petsc-jcc9mra8/config.compilers/conftest -v -fPIC -g -lstdc++ -ldl -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Xlinker -rpath -Xlinker /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread" -mGLOB_position_independent_code -mGLOB_preemption_model=3 -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64 -mP3OPT_emit_line_numbers -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL -mDEBUG_info_level=2 -mDEBUG_use_indirect_strings=TRUE -mIPOPT_ninl_debug_info=TRUE -mDEBUG_emit_dwarf_inline_info=TRUE -mDEBUG_debug_ranges=TRUE -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF40 -mGLOB_as_output_backup_file_name=/tmp/ifortTOOTOEas_.s -mGLOB_dashboard_use_source_name -mGLOB_dashboard_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers -mIPOPT_activate -mGLOB_product_id_code=0x22006d91 -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mP2OPT_disam_type_based_disam=2 -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mGLOB_opt_report_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers -mGLOB_offload_mode=1 -mP2OPT_offload_unique_var_string=ifort0534337927r7Wi2i -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/libiml_attr.so -mP2OPT_hlo_embed_loopinfo -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_link -mIPOPT_ipo_activate -mIPOPT_mo_activate -mIPOPT_source_files_list=/tmp/ifortslisVAKE83 -mIPOPT_mo_global_data -mIPOPT_link_script_file=/tmp/ifortscriptPZdMtR "-mIPOPT_cmdline_link="/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o" "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o" "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o" "--eh-frame-hdr" "--build-id" "-dynamic-linker" "/lib64/ld-linux-x86-64.so.2" "-m" "elf_x86_64" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib" "-plugin" "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so" "-o" "/tmp/petsc-jcc9mra8/config.compilers/conftest" "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64" "-L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin" "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/" "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64" "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/" "-L/lib/../lib64" "-L/lib/../lib64/" "-L/usr/lib/../lib64" "-L/usr/lib/../lib64/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64/" "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64/" "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../" "-L/lib64" "-L/lib/" "-L/usr/lib64" "-L/usr/lib" "/tmp/petsc-jcc9mra8/config.compilers/conftest.o" "-lstdc++" "-ldl" "--enable-new-dtags" "-rpath" "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt" "-rpath" "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib" "-lmpifort" "-lmpi" "-ldl" "-lrt" "-lpthread" "-Bdynamic" "-Bstatic" "-lifport" "-lifcoremt_pic" "-limf" "-lsvml" "-Bdynamic" "-lm" "-Bstatic" "-lipgo" "-lirc" "-Bdynamic" "-lpthread" "-Bstatic" "-lsvml" "-Bdynamic" "-lc" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc_s" "-Bdynamic" "-ldl" "-lc" "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o" "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o"" -mIPOPT_il_in_obj -mIPOPT_ipo_activate_warn=FALSE -mIPOPT_obj_output_file_name=/tmp/ipo_ifort9EE75h.o -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchLfR1vf -mGLOB_linker_version=2.27 -mGLOB_linker=ld -mGLOB_driver_tempfile_name=/tmp/iforttempfileFFk2R2 -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/tmp/ipo_ifort9EE75h.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE -mP1OPT_source_file_name=ipo_out.f -mP2OPT_symtab_type_copy=true /tmp/petsc-jcc9mra8/config.compilers/conftest.o -mIPOPT_object_files=T -mIPOPT_assembly_files=/tmp/ifortalisfuxgMS -mIPOPT_generated_tempfiles=/tmp/ifortelishSKl7F -mIPOPT_embedded_object_base_name=/tmp/iforteobjTcwrst -mIPOPT_cmdline_link_new_name=/tmp/ifortllisnXPxNg ld /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o --eh-frame-hdr --build-id -dynamic-linker /lib64/ld-linux-x86-64.so.2 -m elf_x86_64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -plugin /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so -o /tmp/petsc-jcc9mra8/config.compilers/conftest /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/ -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64/ -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib /tmp/petsc-jcc9mra8/config.compilers/conftest.o -lstdc++ -ldl --enable-new-dtags -rpath /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -rpath /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -ldl -lrt -lpthread -Bdynamic -Bstatic -lifport -lifcoremt_pic -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o compilers: Checking arg mpiifort compilers: Unknown arg mpiifort compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg Intel(R) compilers: Unknown arg Intel(R) compilers: Checking arg MPI compilers: Unknown arg MPI compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg 2019 compilers: Unknown arg 2019 compilers: Checking arg Update compilers: Unknown arg Update compilers: Checking arg 8 compilers: Unknown arg 8 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg Linux* compilers: Unknown arg Linux* compilers: Checking arg Copyright compilers: Unknown arg Copyright compilers: Checking arg 2003-2020, compilers: Unknown arg 2003-2020, compilers: Checking arg Intel compilers: Unknown arg Intel compilers: Checking arg Corporation. compilers: Unknown arg Corporation. compilers: Checking arg ifort compilers: Unknown arg ifort compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 19.1.2.254 compilers: Unknown arg 19.1.2.254 compilers: Checking arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/fortcom compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/fortcom compilers: Checking arg -mGLOB_em64t=TRUE compilers: Unknown arg -mGLOB_em64t=TRUE compilers: Checking arg -mP1OPT_version=19.1-intel64 compilers: Unknown arg -mP1OPT_version=19.1-intel64 compilers: Checking arg -mGLOB_diag_file=/tmp/petsc-jcc9mra8/config.compilers/conftest.diag compilers: Unknown arg -mGLOB_diag_file=/tmp/petsc-jcc9mra8/config.compilers/conftest.diag compilers: Checking arg -mGLOB_long_size_64 compilers: Unknown arg -mGLOB_long_size_64 compilers: Checking arg -mGLOB_routine_pointer_size_64 compilers: Unknown arg -mGLOB_routine_pointer_size_64 compilers: Checking arg -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 compilers: Unknown arg -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 compilers: Checking arg -mP2OPT_static_promotion compilers: Unknown arg -mP2OPT_static_promotion compilers: Checking arg -mGLOB_pack_sort_init_list compilers: Unknown arg -mGLOB_pack_sort_init_list compilers: Checking arg -mP1OPT_print_version=FALSE compilers: Unknown arg -mP1OPT_print_version=FALSE compilers: Checking arg -mCG_use_gas_got_workaround=F compilers: Unknown arg -mCG_use_gas_got_workaround=F compilers: Checking arg -mP2OPT_align_option_used=TRUE compilers: Unknown arg -mP2OPT_align_option_used=TRUE compilers: Checking arg -mGLOB_gcc_version=485 compilers: Unknown arg -mGLOB_gcc_version=485 compilers: Checking arg "-mGLOB_options_string=-I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include compilers: Unknown arg "-mGLOB_options_string=-I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include compilers: Checking arg -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include compilers: Found include directory: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-jcc9mra8/config.compilers/conftest compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -ldl compilers: Found library: -ldl compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Checking arg -lmpifort compilers: Found library: -lmpifort compilers: Checking arg -lmpi compilers: Found library: -lmpi compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lrt compilers: Found library: -lrt compilers: Checking arg -lpthread" compilers: Found library: -lpthread compilers: Checking arg -mGLOB_position_independent_code compilers: Unknown arg -mGLOB_position_independent_code compilers: Checking arg -mGLOB_preemption_model=3 compilers: Unknown arg -mGLOB_preemption_model=3 compilers: Checking arg -mGLOB_cxx_limited_range=FALSE compilers: Unknown arg -mGLOB_cxx_limited_range=FALSE compilers: Checking arg -mCG_extend_parms=FALSE compilers: Unknown arg -mCG_extend_parms=FALSE compilers: Checking arg -mGLOB_compiler_bin_directory=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64 compilers: Unknown arg -mGLOB_compiler_bin_directory=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64 compilers: Checking arg -mP3OPT_emit_line_numbers compilers: Unknown arg -mP3OPT_emit_line_numbers compilers: Checking arg -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL compilers: Unknown arg -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL compilers: Checking arg -mDEBUG_info_level=2 compilers: Unknown arg -mDEBUG_info_level=2 compilers: Checking arg -mDEBUG_use_indirect_strings=TRUE compilers: Unknown arg -mDEBUG_use_indirect_strings=TRUE compilers: Checking arg -mIPOPT_ninl_debug_info=TRUE compilers: Unknown arg -mIPOPT_ninl_debug_info=TRUE compilers: Checking arg -mDEBUG_emit_dwarf_inline_info=TRUE compilers: Unknown arg -mDEBUG_emit_dwarf_inline_info=TRUE compilers: Checking arg -mDEBUG_debug_ranges=TRUE compilers: Unknown arg -mDEBUG_debug_ranges=TRUE compilers: Checking arg -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF40 compilers: Unknown arg -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF40 compilers: Checking arg -mGLOB_as_output_backup_file_name=/tmp/ifortTOOTOEas_.s compilers: Unknown arg -mGLOB_as_output_backup_file_name=/tmp/ifortTOOTOEas_.s compilers: Checking arg -mGLOB_dashboard_use_source_name compilers: Unknown arg -mGLOB_dashboard_use_source_name compilers: Checking arg -mGLOB_dashboard_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers compilers: Unknown arg -mGLOB_dashboard_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers compilers: Checking arg -mIPOPT_activate compilers: Unknown arg -mIPOPT_activate compilers: Checking arg -mGLOB_product_id_code=0x22006d91 compilers: Unknown arg -mGLOB_product_id_code=0x22006d91 compilers: Checking arg -mP3OPT_use_mspp_call_convention compilers: Unknown arg -mP3OPT_use_mspp_call_convention compilers: Checking arg -mP2OPT_subs_out_of_bound=FALSE compilers: Unknown arg -mP2OPT_subs_out_of_bound=FALSE compilers: Checking arg -mP2OPT_disam_type_based_disam=2 compilers: Unknown arg -mP2OPT_disam_type_based_disam=2 compilers: Checking arg -mGLOB_ansi_alias compilers: Unknown arg -mGLOB_ansi_alias compilers: Checking arg -mPGOPTI_value_profile_use=T compilers: Unknown arg -mPGOPTI_value_profile_use=T compilers: Checking arg -mGLOB_opt_report_use_source_name compilers: Unknown arg -mGLOB_opt_report_use_source_name compilers: Checking arg -mGLOB_opt_report_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers compilers: Unknown arg -mGLOB_opt_report_per_object_dir=/tmp/petsc-jcc9mra8/config.compilers compilers: Checking arg -mGLOB_offload_mode=1 compilers: Unknown arg -mGLOB_offload_mode=1 compilers: Checking arg -mP2OPT_offload_unique_var_string=ifort0534337927r7Wi2i compilers: Unknown arg -mP2OPT_offload_unique_var_string=ifort0534337927r7Wi2i compilers: Checking arg -mP2OPT_hlo compilers: Unknown arg -mP2OPT_hlo compilers: Checking arg -mP2OPT_hpo_rtt_control=0 compilers: Unknown arg -mP2OPT_hpo_rtt_control=0 compilers: Checking arg -mIPOPT_args_in_regs=0 compilers: Unknown arg -mIPOPT_args_in_regs=0 compilers: Checking arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Unknown arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Checking arg -mGLOB_imf_mapping_library=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/libiml_attr.so compilers: Unknown arg -mGLOB_imf_mapping_library=/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/libiml_attr.so compilers: Checking arg -mP2OPT_hlo_embed_loopinfo compilers: Unknown arg -mP2OPT_hlo_embed_loopinfo compilers: Checking arg -mPGOPTI_gen_threadsafe_level=0 compilers: Unknown arg -mPGOPTI_gen_threadsafe_level=0 compilers: Checking arg -mIPOPT_link compilers: Unknown arg -mIPOPT_link compilers: Checking arg -mIPOPT_ipo_activate compilers: Unknown arg -mIPOPT_ipo_activate compilers: Checking arg -mIPOPT_mo_activate compilers: Unknown arg -mIPOPT_mo_activate compilers: Checking arg -mIPOPT_source_files_list=/tmp/ifortslisVAKE83 compilers: Unknown arg -mIPOPT_source_files_list=/tmp/ifortslisVAKE83 compilers: Checking arg -mIPOPT_mo_global_data compilers: Unknown arg -mIPOPT_mo_global_data compilers: Checking arg -mIPOPT_link_script_file=/tmp/ifortscriptPZdMtR compilers: Unknown arg -mIPOPT_link_script_file=/tmp/ifortscriptPZdMtR compilers: Checking arg "-mIPOPT_cmdline_link="/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o" compilers: Unknown arg -mIPOPT_cmdline_link="/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o compilers: Checking arg "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o" compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o compilers: Checking arg "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o" compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o compilers: Checking arg "--eh-frame-hdr" compilers: Unknown arg --eh-frame-hdr compilers: Checking arg "--build-id" compilers: Unknown arg --build-id compilers: Checking arg "-dynamic-linker" compilers: Unknown arg -dynamic-linker compilers: Checking arg "/lib64/ld-linux-x86-64.so.2" compilers: Unknown arg /lib64/ld-linux-x86-64.so.2 compilers: Checking arg "-m" compilers: Unknown arg -m compilers: Checking arg "elf_x86_64" compilers: Unknown arg elf_x86_64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Checking arg "-plugin" compilers: Unknown arg -plugin compilers: Checking arg "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so" compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so compilers: Checking arg "-o" compilers: Unknown arg -o compilers: Checking arg "/tmp/petsc-jcc9mra8/config.compilers/conftest" compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest compilers: Checking arg "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o" compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin" compilers: Found library directory: -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin compilers: Checking arg "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/" compilers: Found library directory: -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 compilers: Checking arg "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64" compilers: Checking arg "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/" compilers: Checking arg "-L/lib/../lib64" compilers: Checking arg "-L/lib/../lib64/" compilers: Checking arg "-L/usr/lib/../lib64" compilers: Checking arg "-L/usr/lib/../lib64/" compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 compilers: Checking arg "-L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64/" compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 compilers: Checking arg "-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../" compilers: Checking arg "-L/lib64" compilers: Checking arg "-L/lib/" compilers: Checking arg "-L/usr/lib64" compilers: Checking arg "-L/usr/lib" compilers: Checking arg "/tmp/petsc-jcc9mra8/config.compilers/conftest.o" compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest.o compilers: Checking arg "-lstdc++" compilers: Already in lflags: -lstdc++ compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "--enable-new-dtags" compilers: Unknown arg --enable-new-dtags compilers: Checking arg "-rpath" compilers: Found -rpath library: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Checking arg "-rpath" compilers: Found -rpath library: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Checking arg "-lmpifort" compilers: Already in lflags: -lmpifort compilers: Checking arg "-lmpi" compilers: Already in lflags: -lmpi compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "-lrt" compilers: Already in lflags: -lrt compilers: Checking arg "-lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lifport" compilers: Found library: -lifport compilers: Checking arg "-lifcoremt_pic" compilers: Found library: -lifcoremt_pic compilers: Checking arg "-limf" compilers: Found library: -limf compilers: Checking arg "-lsvml" compilers: Found library: -lsvml compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lm" compilers: Found library: -lm compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lipgo" compilers: Found library: -lipgo compilers: Checking arg "-lirc" compilers: Found library: -lirc compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lsvml" compilers: Already in lflags: -lsvml compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lc" compilers: Found system library therefore skipping: -lc compilers: Checking arg "-lgcc" compilers: Found system library therefore skipping: -lgcc compilers: Checking arg "-lgcc_s" compilers: Found library: -lgcc_s compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc_s" compilers: Found library: -lirc_s compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "-lc" compilers: Found system library therefore skipping: -lc compilers: Checking arg "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o" compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o compilers: Checking arg "/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o"" compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o compilers: Checking arg -mIPOPT_il_in_obj compilers: Unknown arg -mIPOPT_il_in_obj compilers: Checking arg -mIPOPT_ipo_activate_warn=FALSE compilers: Unknown arg -mIPOPT_ipo_activate_warn=FALSE compilers: Checking arg -mIPOPT_obj_output_file_name=/tmp/ipo_ifort9EE75h.o compilers: Unknown arg -mIPOPT_obj_output_file_name=/tmp/ipo_ifort9EE75h.o compilers: Checking arg -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchLfR1vf compilers: Unknown arg -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchLfR1vf compilers: Checking arg -mGLOB_linker_version=2.27 compilers: Unknown arg -mGLOB_linker_version=2.27 compilers: Checking arg -mGLOB_linker=ld compilers: Unknown arg -mGLOB_linker=ld compilers: Checking arg -mGLOB_driver_tempfile_name=/tmp/iforttempfileFFk2R2 compilers: Unknown arg -mGLOB_driver_tempfile_name=/tmp/iforttempfileFFk2R2 compilers: Checking arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Unknown arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Checking arg -mGLOB_async_unwind_tables=TRUE compilers: Unknown arg -mGLOB_async_unwind_tables=TRUE compilers: Checking arg -mGLOB_obj_output_file=/tmp/ipo_ifort9EE75h.o compilers: Unknown arg -mGLOB_obj_output_file=/tmp/ipo_ifort9EE75h.o compilers: Checking arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Unknown arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Checking arg -mP1OPT_source_file_name=ipo_out.f compilers: Unknown arg -mP1OPT_source_file_name=ipo_out.f compilers: Checking arg -mP2OPT_symtab_type_copy=true compilers: Unknown arg -mP2OPT_symtab_type_copy=true compilers: Checking arg /tmp/petsc-jcc9mra8/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest.o compilers: Checking arg -mIPOPT_object_files=T compilers: Unknown arg -mIPOPT_object_files=T compilers: Checking arg -mIPOPT_assembly_files=/tmp/ifortalisfuxgMS compilers: Unknown arg -mIPOPT_assembly_files=/tmp/ifortalisfuxgMS compilers: Checking arg -mIPOPT_generated_tempfiles=/tmp/ifortelishSKl7F compilers: Unknown arg -mIPOPT_generated_tempfiles=/tmp/ifortelishSKl7F compilers: Checking arg -mIPOPT_embedded_object_base_name=/tmp/iforteobjTcwrst compilers: Unknown arg -mIPOPT_embedded_object_base_name=/tmp/iforteobjTcwrst compilers: Checking arg -mIPOPT_cmdline_link_new_name=/tmp/ifortllisnXPxNg compilers: Unknown arg -mIPOPT_cmdline_link_new_name=/tmp/ifortllisnXPxNg compilers: Checking arg ld compilers: Unknown arg ld compilers: Checking arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o compilers: Checking arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o compilers: Checking arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg --build-id compilers: Unknown arg --build-id compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-x86-64.so.2 compilers: Unknown arg /lib64/ld-linux-x86-64.so.2 compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_x86_64 compilers: Unknown arg elf_x86_64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib compilers: Checking arg -plugin compilers: Unknown arg -plugin compilers: Checking arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/bin/intel64/../../lib/LLVMgold.so compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-jcc9mra8/config.compilers/conftest compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest compilers: Checking arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o compilers: Unknown arg /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin/for_main.o compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin compilers: Checking arg -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/ compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 compilers: Checking arg -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 compilers: Checking arg -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/ compilers: Checking arg -L/lib/../lib64 compilers: Checking arg -L/lib/../lib64/ compilers: Checking arg -L/usr/lib/../lib64 compilers: Checking arg -L/usr/lib/../lib64/ compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 compilers: Checking arg -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64/ compilers: Already in lflags so skipping: -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 compilers: Checking arg -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../ compilers: Checking arg -L/lib64 compilers: Checking arg -L/lib/ compilers: Checking arg -L/usr/lib64 compilers: Checking arg -L/usr/lib compilers: Checking arg /tmp/petsc-jcc9mra8/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-jcc9mra8/config.compilers/conftest.o compilers: Checking arg -lstdc++ compilers: Already in lflags: -lstdc++ compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -lmpifort compilers: Already in lflags: -lmpifort compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lifport compilers: Already in lflags: -lifport compilers: Checking arg -lifcoremt_pic compilers: Already in lflags: -lifcoremt_pic compilers: Checking arg -limf compilers: Already in lflags: -limf compilers: Checking arg -lsvml compilers: Already in lflags: -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lm compilers: Already in lflags: -lm compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lipgo compilers: Already in lflags: -lipgo compilers: Checking arg -lirc compilers: Already in lflags: -lirc compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lsvml compilers: Already in lflags: -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lc compilers: Found system library therefore skipping: -lc compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc_s compilers: Already in lflags: -lirc_s compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lc compilers: Found system library therefore skipping: -lc compilers: Checking arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o compilers: Checking arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o compilers: Unknown arg /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o compilers: Libraries needed to link Fortran code with the C linker: ['-lstdc++', '-ldl', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib', '-lmpifort', '-lmpi', '-lrt', '-lpthread', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64', '-L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin', '-L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin', '-Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5', '-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt', '-Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib', '-lifport', '-lifcoremt_pic', '-limf', '-lsvml', '-lm', '-lipgo', '-lirc', '-lgcc_s', '-lirc_s'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used with C as the linker ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest compilers: Check that Fortran libraries can be used with C++ as linker compilers: Fortran libraries can be used from C++ ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -lstdc++ -ldl -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -L/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -L/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release_mt -Wl,-rpath,/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lgcc_s -lirc_s -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.setCompilers/conftest ============================================================================================= TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1332) Check that Fortran can link C++ libraries ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilers/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilers/conftest.o /tmp/petsc-jcc9mra8/config.compilers/cxxobj.o /tmp/petsc-jcc9mra8/config.compilers/confc.o -lstdc++ -ldl compilers: Fortran can link C++ functions ============================================================================================= TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1487) child config.compilers 12.136030 ============================================================================================= TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:17) Determine if Apple ^close syntax is supported in C ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.closure/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.utilities.closure/conftest.c(6): error: expected an identifier int (^closure)(int);; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.utilities.closure/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link child config.utilities.closure 0.124324 ============================================================================================= TESTING: checkFortranTypeSizes from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:56) Check whether real*8 is supported and suggest flags which will allow support Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main real*8 variable end ============================================================================================= TESTING: checkFortranPreprocessor from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:73) Determine if Fortran handles preprocessing properly Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end compilers: Fortran uses preprocessor ============================================================================================= TESTING: checkFortranDefineCompilerOption from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:96) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.setCompilers -fPIC -g -DTesting /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" compilers: Fortran uses -D for defining macro ============================================================================================= TESTING: checkFortran90 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:146) Determine whether the Fortran compiler handles F90 ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main REAL(KIND=SELECTED_REAL_KIND(10)) d INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -lstdc++ -ldl Fortran compiler supports F90 ============================================================================================= TESTING: checkFortran90FreeForm from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:162) Determine whether the Fortran compiler handles F90FreeForm We also require that the compiler handles lines longer than 132 characters ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8); INTEGER (KIND=int) :: ierr; ierr = 1 end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "USING_F90FREEFORM" to "1" Fortran compiler supports F90FreeForm ============================================================================================= TESTING: checkFortran2003 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:176) Determine whether the Fortran compiler handles F2003 ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: module Base_module type, public :: base_type integer :: A contains procedure, public :: Print => BasePrint end type base_type contains subroutine BasePrint(this) class(base_type) :: this end subroutine BasePrint end module Base_module program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 ============================================================================================= TESTING: checkFortran90Array from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:211) Check for F90 array interfaces Executing: uname -s stdout: Linux ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o /tmp/petsc-jcc9mra8/config.compilersFortran/fooobj.o -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.compilersFortran/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.compilersFortran/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.compilersFortran/conftest stdout: arrays [0x6a51e0 0x6a51e0 0x6a51e0] arrays [0x6a52e0 0x6a5280 0x6a52e0] pointers do not match! [0x7f6e9fde4b80 0x19] [0x7f6e9d6592cd] ERROR while running executable: Could not execute "['/tmp/petsc-jcc9mra8/config.compilersFortran/conftest']": arrays [0x6a51e0 0x6a51e0 0x6a51e0] arrays [0x6a52e0 0x6a5280 0x6a52e0] pointers do not match! [0x7f6e9fde4b80 0x19] [0x7f6e9d6592cd] compilers: F90 uses a single argument for array pointers ============================================================================================= TESTING: checkFortran90AssumedType from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:298) Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -qversion ============================================================================================= TESTING: checkFortranModuleInclude from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:303) Figures out what flag is used to specify the include path for Fortran modules ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.compilersFortran/confdir -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main use configtest write(*,*) testint end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -I/tmp/petsc-jcc9mra8/config.compilersFortran/confdir -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o /tmp/petsc-jcc9mra8/config.compilersFortran/configtest.o -lstdc++ -ldl compilers: Fortran module include flag -I found ============================================================================================= TESTING: checkFortranModuleOutput from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:369) Figures out what flag is used to specify the include path for Fortran modules ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -module /tmp/petsc-jcc9mra8/config.compilersFortran/confdir -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module found ============================================================================================= TESTING: checkFortranTypeStar from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:135) Determine whether the Fortran compiler handles type(*) ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main interface subroutine a(b) type(*) :: b(:) end subroutine end interface end Defined "HAVE_FORTRAN_TYPE_STAR" to "1" Fortran compiler supports type(*) ============================================================================================= TESTING: checkFortranTypeInitialize from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:125) Determines if PETSc objects in Fortran are initialized by default (doesn't work with common blocks) Defined "FORTRAN_TYPE_INITIALIZE" to " = -2" Initializing Fortran objects ============================================================================================= TESTING: configureFortranFlush from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:116) ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.F90 Successful compile: Source: program main call flush(6) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.compilersFortran/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "HAVE_FORTRAN_FLUSH" to "1" ============================================================================================= TESTING: checkDependencyGenerationFlag from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:414) Check if -MMD works for dependency generation, and add it if it does Trying FC compiler flag -MMD -MP Rejected FC compiler flag -MMD -MP Trying FC compiler flag -MMD Rejected FC compiler flag -MMD because no dependency file (/tmp/petsc-jcc9mra8/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Rejected FC compiler flag -xMMD Trying FC compiler flag -qmakedep=gcc Rejected FC compiler flag -qmakedep=gcc Trying FC compiler flag -MD Rejected FC compiler flag -MD because no dependency file (/tmp/petsc-jcc9mra8/config.setCompilers/conftest.d) was generated Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -MMD -MP /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Possible ERROR while running compiler: stderr: ifort: command line warning #10006: ignoring unknown option '-MP' Source: program main end Rejecting compiler flag -MMD -MP due to ifort: command line warning #10006: ignoring unknown option '-MP' Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -MMD /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -xMMD /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: ifort: command line error: Unrecognized keyword 'MMD' for option '-x' Source: program main end Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to ifort: command line error: Unrecognized keyword 'MMD' for option '-x' PETSc Error: No output file produced Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -qmakedep=gcc /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Possible ERROR while running compiler: stderr: ifort: command line warning #10006: ignoring unknown option '-qmakedep=gcc' Source: program main end Rejecting compiler flag -qmakedep=gcc due to ifort: command line warning #10006: ignoring unknown option '-qmakedep=gcc' Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.setCompilers/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -fPIC -g -MD /tmp/petsc-jcc9mra8/config.setCompilers/conftest.F90 Successful compile: Source: program main end child config.compilersFortran 4.212662 ============================================================================================= TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.headers/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.headers/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.headers/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.headers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.headers/conftest ============================================================================================= TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c ============================================================================================= TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_TIME_H" to "1" ============================================================================================= TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:201) Checks for the math headers and defines Checking for header: math.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(6): error: identifier "M_PI" is undefined double pi = M_PI; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.headers/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(7): error: identifier "M_PI" is undefined double pi = M_PI; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.headers/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #define _USE_MATH_DEFINES 1 #include int main() { double pi = M_PI; if (pi); ; return 0; } Missing math #defines, like M_PI ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SETJMP_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FCNTL_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_MALLOC_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_PWD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_STRINGS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_UNISTD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_SYSINFO_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_PARAM_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_PROCFS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_RESOURCE_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_TIMES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_UTSNAME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_SOCKET_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_NETINET_IN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_NETDB_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_TIME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_TYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_STDINT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_PTHREAD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_INTTYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_IMMINTRIN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 1 3 typedef unsigned char __mmask8; typedef unsigned short __mmask16; typedef unsigned int __mmask32; typedef unsigned __int64 __mmask64; typedef __mmask16 __mmask; # 56 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef union _MMINTRIN_TYPE(64) __m512 { float __m512_f32[16]; } __m512; typedef union _MMINTRIN_TYPE(64) __m512d { double __m512d_f64[8]; } __m512d; typedef union _MMINTRIN_TYPE(64) __m512i { __int64 m512i_gcc_compatibility[8]; __int8 m512i_i8[64]; __int16 m512i_i16[32]; __int32 m512i_i32[16]; __int64 m512i_i64[8]; unsigned __int8 m512i_u8[64]; unsigned __int16 m512i_u16[32]; unsigned __int32 m512i_u32[16]; unsigned __int64 m512i_u64[8]; int __m512i_i32[16]; } __m512i; # 101 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_SWIZ_REG_NONE, _MM_SWIZ_REG_CDAB, _MM_SWIZ_REG_BADC, _MM_SWIZ_REG_AAAA, _MM_SWIZ_REG_BBBB, _MM_SWIZ_REG_CCCC, _MM_SWIZ_REG_DDDD, _MM_SWIZ_REG_DACB } _MM_SWIZZLE_ENUM; typedef enum { _MM_BROADCAST32_NONE, _MM_BROADCAST_1X16, _MM_BROADCAST_4X16 } _MM_BROADCAST32_ENUM; typedef enum { _MM_BROADCAST64_NONE, _MM_BROADCAST_1X8, _MM_BROADCAST_4X8 } _MM_BROADCAST64_ENUM; typedef enum { _MM_ROUND_MODE_NEAREST, _MM_ROUND_MODE_DOWN, _MM_ROUND_MODE_UP, _MM_ROUND_MODE_TOWARD_ZERO, _MM_ROUND_MODE_DEFAULT } _MM_ROUND_MODE_ENUM; typedef enum { _MM_EXPADJ_NONE, _MM_EXPADJ_4, _MM_EXPADJ_5, _MM_EXPADJ_8, _MM_EXPADJ_16, _MM_EXPADJ_24, _MM_EXPADJ_31, _MM_EXPADJ_32 } _MM_EXP_ADJ_ENUM; typedef enum { _MM_SCALE_1 = 1, _MM_SCALE_2 = 2, _MM_SCALE_4 = 4, _MM_SCALE_8 = 8 } _MM_INDEX_SCALE_ENUM; typedef enum { _MM_PERM_AAAA = 0x00, _MM_PERM_AAAB = 0x01, _MM_PERM_AAAC = 0x02, _MM_PERM_AAAD = 0x03, _MM_PERM_AABA = 0x04, _MM_PERM_AABB = 0x05, _MM_PERM_AABC = 0x06, _MM_PERM_AABD = 0x07, _MM_PERM_AACA = 0x08, _MM_PERM_AACB = 0x09, _MM_PERM_AACC = 0x0A, _MM_PERM_AACD = 0x0B, _MM_PERM_AADA = 0x0C, _MM_PERM_AADB = 0x0D, _MM_PERM_AADC = 0x0E, _MM_PERM_AADD = 0x0F, _MM_PERM_ABAA = 0x10, _MM_PERM_ABAB = 0x11, _MM_PERM_ABAC = 0x12, _MM_PERM_ABAD = 0x13, _MM_PERM_ABBA = 0x14, _MM_PERM_ABBB = 0x15, _MM_PERM_ABBC = 0x16, _MM_PERM_ABBD = 0x17, _MM_PERM_ABCA = 0x18, _MM_PERM_ABCB = 0x19, _MM_PERM_ABCC = 0x1A, _MM_PERM_ABCD = 0x1B, _MM_PERM_ABDA = 0x1C, _MM_PERM_ABDB = 0x1D, _MM_PERM_ABDC = 0x1E, _MM_PERM_ABDD = 0x1F, _MM_PERM_ACAA = 0x20, _MM_PERM_ACAB = 0x21, _MM_PERM_ACAC = 0x22, _MM_PERM_ACAD = 0x23, _MM_PERM_ACBA = 0x24, _MM_PERM_ACBB = 0x25, _MM_PERM_ACBC = 0x26, _MM_PERM_ACBD = 0x27, _MM_PERM_ACCA = 0x28, _MM_PERM_ACCB = 0x29, _MM_PERM_ACCC = 0x2A, _MM_PERM_ACCD = 0x2B, _MM_PERM_ACDA = 0x2C, _MM_PERM_ACDB = 0x2D, _MM_PERM_ACDC = 0x2E, _MM_PERM_ACDD = 0x2F, _MM_PERM_ADAA = 0x30, _MM_PERM_ADAB = 0x31, _MM_PERM_ADAC = 0x32, _MM_PERM_ADAD = 0x33, _MM_PERM_ADBA = 0x34, _MM_PERM_ADBB = 0x35, _MM_PERM_ADBC = 0x36, _MM_PERM_ADBD = 0x37, _MM_PERM_ADCA = 0x38, _MM_PERM_ADCB = 0x39, _MM_PERM_ADCC = 0x3A, _MM_PERM_ADCD = 0x3B, _MM_PERM_ADDA = 0x3C, _MM_PERM_ADDB = 0x3D, _MM_PERM_ADDC = 0x3E, _MM_PERM_ADDD = 0x3F, _MM_PERM_BAAA = 0x40, _MM_PERM_BAAB = 0x41, _MM_PERM_BAAC = 0x42, _MM_PERM_BAAD = 0x43, _MM_PERM_BABA = 0x44, _MM_PERM_BABB = 0x45, _MM_PERM_BABC = 0x46, _MM_PERM_BABD = 0x47, _MM_PERM_BACA = 0x48, _MM_PERM_BACB = 0x49, _MM_PERM_BACC = 0x4A, _MM_PERM_BACD = 0x4B, _MM_PERM_BADA = 0x4C, _MM_PERM_BADB = 0x4D, _MM_PERM_BADC = 0x4E, _MM_PERM_BADD = 0x4F, _MM_PERM_BBAA = 0x50, _MM_PERM_BBAB = 0x51, _MM_PERM_BBAC = 0x52, _MM_PERM_BBAD = 0x53, _MM_PERM_BBBA = 0x54, _MM_PERM_BBBB = 0x55, _MM_PERM_BBBC = 0x56, _MM_PERM_BBBD = 0x57, _MM_PERM_BBCA = 0x58, _MM_PERM_BBCB = 0x59, _MM_PERM_BBCC = 0x5A, _MM_PERM_BBCD = 0x5B, _MM_PERM_BBDA = 0x5C, _MM_PERM_BBDB = 0x5D, _MM_PERM_BBDC = 0x5E, _MM_PERM_BBDD = 0x5F, _MM_PERM_BCAA = 0x60, _MM_PERM_BCAB = 0x61, _MM_PERM_BCAC = 0x62, _MM_PERM_BCAD = 0x63, _MM_PERM_BCBA = 0x64, _MM_PERM_BCBB = 0x65, _MM_PERM_BCBC = 0x66, _MM_PERM_BCBD = 0x67, _MM_PERM_BCCA = 0x68, _MM_PERM_BCCB = 0x69, _MM_PERM_BCCC = 0x6A, _MM_PERM_BCCD = 0x6B, _MM_PERM_BCDA = 0x6C, _MM_PERM_BCDB = 0x6D, _MM_PERM_BCDC = 0x6E, _MM_PERM_BCDD = 0x6F, _MM_PERM_BDAA = 0x70, _MM_PERM_BDAB = 0x71, _MM_PERM_BDAC = 0x72, _MM_PERM_BDAD = 0x73, _MM_PERM_BDBA = 0x74, _MM_PERM_BDBB = 0x75, _MM_PERM_BDBC = 0x76, _MM_PERM_BDBD = 0x77, _MM_PERM_BDCA = 0x78, _MM_PERM_BDCB = 0x79, _MM_PERM_BDCC = 0x7A, _MM_PERM_BDCD = 0x7B, _MM_PERM_BDDA = 0x7C, _MM_PERM_BDDB = 0x7D, _MM_PERM_BDDC = 0x7E, _MM_PERM_BDDD = 0x7F, _MM_PERM_CAAA = 0x80, _MM_PERM_CAAB = 0x81, _MM_PERM_CAAC = 0x82, _MM_PERM_CAAD = 0x83, _MM_PERM_CABA = 0x84, _MM_PERM_CABB = 0x85, _MM_PERM_CABC = 0x86, _MM_PERM_CABD = 0x87, _MM_PERM_CACA = 0x88, _MM_PERM_CACB = 0x89, _MM_PERM_CACC = 0x8A, _MM_PERM_CACD = 0x8B, _MM_PERM_CADA = 0x8C, _MM_PERM_CADB = 0x8D, _MM_PERM_CADC = 0x8E, _MM_PERM_CADD = 0x8F, _MM_PERM_CBAA = 0x90, _MM_PERM_CBAB = 0x91, _MM_PERM_CBAC = 0x92, _MM_PERM_CBAD = 0x93, _MM_PERM_CBBA = 0x94, _MM_PERM_CBBB = 0x95, _MM_PERM_CBBC = 0x96, _MM_PERM_CBBD = 0x97, _MM_PERM_CBCA = 0x98, _MM_PERM_CBCB = 0x99, _MM_PERM_CBCC = 0x9A, _MM_PERM_CBCD = 0x9B, _MM_PERM_CBDA = 0x9C, _MM_PERM_CBDB = 0x9D, _MM_PERM_CBDC = 0x9E, _MM_PERM_CBDD = 0x9F, _MM_PERM_CCAA = 0xA0, _MM_PERM_CCAB = 0xA1, _MM_PERM_CCAC = 0xA2, _MM_PERM_CCAD = 0xA3, _MM_PERM_CCBA = 0xA4, _MM_PERM_CCBB = 0xA5, _MM_PERM_CCBC = 0xA6, _MM_PERM_CCBD = 0xA7, _MM_PERM_CCCA = 0xA8, _MM_PERM_CCCB = 0xA9, _MM_PERM_CCCC = 0xAA, _MM_PERM_CCCD = 0xAB, _MM_PERM_CCDA = 0xAC, _MM_PERM_CCDB = 0xAD, _MM_PERM_CCDC = 0xAE, _MM_PERM_CCDD = 0xAF, _MM_PERM_CDAA = 0xB0, _MM_PERM_CDAB = 0xB1, _MM_PERM_CDAC = 0xB2, _MM_PERM_CDAD = 0xB3, _MM_PERM_CDBA = 0xB4, _MM_PERM_CDBB = 0xB5, _MM_PERM_CDBC = 0xB6, _MM_PERM_CDBD = 0xB7, _MM_PERM_CDCA = 0xB8, _MM_PERM_CDCB = 0xB9, _MM_PERM_CDCC = 0xBA, _MM_PERM_CDCD = 0xBB, _MM_PERM_CDDA = 0xBC, _MM_PERM_CDDB = 0xBD, _MM_PERM_CDDC = 0xBE, _MM_PERM_CDDD = 0xBF, _MM_PERM_DAAA = 0xC0, _MM_PERM_DAAB = 0xC1, _MM_PERM_DAAC = 0xC2, _MM_PERM_DAAD = 0xC3, _MM_PERM_DABA = 0xC4, _MM_PERM_DABB = 0xC5, _MM_PERM_DABC = 0xC6, _MM_PERM_DABD = 0xC7, _MM_PERM_DACA = 0xC8, _MM_PERM_DACB = 0xC9, _MM_PERM_DACC = 0xCA, _MM_PERM_DACD = 0xCB, _MM_PERM_DADA = 0xCC, _MM_PERM_DADB = 0xCD, _MM_PERM_DADC = 0xCE, _MM_PERM_DADD = 0xCF, _MM_PERM_DBAA = 0xD0, _MM_PERM_DBAB = 0xD1, _MM_PERM_DBAC = 0xD2, _MM_PERM_DBAD = 0xD3, _MM_PERM_DBBA = 0xD4, _MM_PERM_DBBB = 0xD5, _MM_PERM_DBBC = 0xD6, _MM_PERM_DBBD = 0xD7, _MM_PERM_DBCA = 0xD8, _MM_PERM_DBCB = 0xD9, _MM_PERM_DBCC = 0xDA, _MM_PERM_DBCD = 0xDB, _MM_PERM_DBDA = 0xDC, _MM_PERM_DBDB = 0xDD, _MM_PERM_DBDC = 0xDE, _MM_PERM_DBDD = 0xDF, _MM_PERM_DCAA = 0xE0, _MM_PERM_DCAB = 0xE1, _MM_PERM_DCAC = 0xE2, _MM_PERM_DCAD = 0xE3, _MM_PERM_DCBA = 0xE4, _MM_PERM_DCBB = 0xE5, _MM_PERM_DCBC = 0xE6, _MM_PERM_DCBD = 0xE7, _MM_PERM_DCCA = 0xE8, _MM_PERM_DCCB = 0xE9, _MM_PERM_DCCC = 0xEA, _MM_PERM_DCCD = 0xEB, _MM_PERM_DCDA = 0xEC, _MM_PERM_DCDB = 0xED, _MM_PERM_DCDC = 0xEE, _MM_PERM_DCDD = 0xEF, _MM_PERM_DDAA = 0xF0, _MM_PERM_DDAB = 0xF1, _MM_PERM_DDAC = 0xF2, _MM_PERM_DDAD = 0xF3, _MM_PERM_DDBA = 0xF4, _MM_PERM_DDBB = 0xF5, _MM_PERM_DDBC = 0xF6, _MM_PERM_DDBD = 0xF7, _MM_PERM_DDCA = 0xF8, _MM_PERM_DDCB = 0xF9, _MM_PERM_DDCC = 0xFA, _MM_PERM_DDCD = 0xFB, _MM_PERM_DDDA = 0xFC, _MM_PERM_DDDB = 0xFD, _MM_PERM_DDDC = 0xFE, _MM_PERM_DDDD = 0xFF } _MM_PERM_ENUM; typedef enum { _MM_UPCONV_PS_NONE, _MM_UPCONV_PS_FLOAT16, _MM_UPCONV_PS_UINT8, _MM_UPCONV_PS_SINT8, _MM_UPCONV_PS_UINT16, _MM_UPCONV_PS_SINT16 } _MM_UPCONV_PS_ENUM; # 308 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_EPI32_NONE, _MM_UPCONV_EPI32_UINT8, _MM_UPCONV_EPI32_SINT8, _MM_UPCONV_EPI32_UINT16, _MM_UPCONV_EPI32_SINT16 } _MM_UPCONV_EPI32_ENUM; # 333 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 340 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_PD_NONE } _MM_UPCONV_PD_ENUM; # 362 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_EPI64_NONE } _MM_UPCONV_EPI64_ENUM; # 407 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_DOWNCONV_PS_NONE, _MM_DOWNCONV_PS_FLOAT16, _MM_DOWNCONV_PS_UINT8, _MM_DOWNCONV_PS_SINT8, _MM_DOWNCONV_PS_UINT16, _MM_DOWNCONV_PS_SINT16 } _MM_DOWNCONV_PS_ENUM; typedef enum { _MM_DOWNCONV_EPI32_NONE, _MM_DOWNCONV_EPI32_UINT8, _MM_DOWNCONV_EPI32_SINT8, _MM_DOWNCONV_EPI32_UINT16, _MM_DOWNCONV_EPI32_SINT16 } _MM_DOWNCONV_EPI32_ENUM; typedef enum { _MM_DOWNCONV_PD_NONE } _MM_DOWNCONV_PD_ENUM; typedef enum { _MM_DOWNCONV_EPI64_NONE } _MM_DOWNCONV_EPI64_ENUM; # 480 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 514 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 538 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 648 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 745 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 788 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_CMPINT_EQ, _MM_CMPINT_LT, _MM_CMPINT_LE, _MM_CMPINT_UNUSED, _MM_CMPINT_NE, _MM_CMPINT_NLT, _MM_CMPINT_NLE } _MM_CMPINT_ENUM; # 813 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 838 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 846 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 871 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 878 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 908 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 921 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 951 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 964 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1005 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1038 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1056 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1107 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1192 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1299 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1386 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1443 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1465 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_MANT_NORM_1_2, _MM_MANT_NORM_p5_2, _MM_MANT_NORM_p5_1, _MM_MANT_NORM_p75_1p5 } _MM_MANTISSA_NORM_ENUM; typedef enum { _MM_MANT_SIGN_src, _MM_MANT_SIGN_zero, _MM_MANT_SIGN_nan } _MM_MANTISSA_SIGN_ENUM; # 1500 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1596 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1603 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1610 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1617 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1624 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1631 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1638 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1719 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1726 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1733 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1808 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1831 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1882 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1904 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1926 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1948 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1970 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2011 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2093 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2111 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2157 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2196 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2224 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2252 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2281 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2314 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2373 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2390 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2404 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2421 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2437 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2476 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2516 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2930 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3012 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3031 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3061 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3176 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3193 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3210 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3235 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3268 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3340 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3347 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3355 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3362 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3370 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3381 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3600 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3607 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3615 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3622 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3630 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3637 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3661 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3668 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3676 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3683 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3691 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3698 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3706 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3713 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3735 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3742 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3750 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3757 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3909 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3916 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3924 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3931 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4094 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4102 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4110 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4118 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4131 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4138 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4146 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4154 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4163 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4171 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4179 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4187 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4196 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4204 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4212 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4219 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4227 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4235 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4251 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4259 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4267 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4275 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4283 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4291 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4298 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4306 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4313 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4431 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4444 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4507 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4520 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4529 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4554 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4562 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4570 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4632 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4642 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4653 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4663 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4679 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4699 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4720 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4749 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4788 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4797 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4815 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4829 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4843 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4857 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4866 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4888 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4902 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4916 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4930 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4981 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4991 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5003 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5013 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5024 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5034 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5046 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5056 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5067 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5077 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5100 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5111 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5121 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5144 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5170 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5301 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5311 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5321 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5331 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5338 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5345 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5355 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5365 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5378 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5385 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5392 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5427 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5443 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5474 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5488 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5502 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5520 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5603 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5610 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5617 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5624 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5631 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5638 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5659 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5666 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5733 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6341 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6366 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6374 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6399 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6407 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6432 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6440 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6465 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6473 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6506 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6531 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6539 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6564 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6614 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6639 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6670 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6677 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6702 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6709 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6734 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6765 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6772 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6797 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6804 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6829 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6867 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6892 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6899 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6924 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6955 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6962 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6987 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6994 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7019 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7422 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7430 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7445 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7453 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7506 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7521 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7529 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7554 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7571 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7579 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7627 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7635 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7650 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7658 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7681 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7696 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7704 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7721 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7729 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7744 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7752 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7774 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8740 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8803 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8820 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8891 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8909 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10346 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10386 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10548 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef __m128i __m128bh; typedef __m256i __m256bh; typedef __m512i __m512bh; # 11248 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ : Preprocess stderr after filtering: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3):/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SETJMP_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FCNTL_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_MALLOC_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_PWD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_STRINGS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_UNISTD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_SYSINFO_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_PARAM_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_PROCFS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_RESOURCE_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_TIMES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_UTSNAME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_SOCKET_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_NETINET_IN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_NETDB_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "direct.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_TIME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_SYS_TYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_STDINT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_PTHREAD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_INTTYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_IMMINTRIN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 1 3 typedef unsigned char __mmask8; typedef unsigned short __mmask16; typedef unsigned int __mmask32; typedef unsigned __int64 __mmask64; typedef __mmask16 __mmask; # 56 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef union _MMINTRIN_TYPE(64) __m512 { float __m512_f32[16]; } __m512; typedef union _MMINTRIN_TYPE(64) __m512d { double __m512d_f64[8]; } __m512d; typedef union _MMINTRIN_TYPE(64) __m512i { __int64 m512i_gcc_compatibility[8]; __int8 m512i_i8[64]; __int16 m512i_i16[32]; __int32 m512i_i32[16]; __int64 m512i_i64[8]; unsigned __int8 m512i_u8[64]; unsigned __int16 m512i_u16[32]; unsigned __int32 m512i_u32[16]; unsigned __int64 m512i_u64[8]; int __m512i_i32[16]; } __m512i; # 101 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_SWIZ_REG_NONE, _MM_SWIZ_REG_CDAB, _MM_SWIZ_REG_BADC, _MM_SWIZ_REG_AAAA, _MM_SWIZ_REG_BBBB, _MM_SWIZ_REG_CCCC, _MM_SWIZ_REG_DDDD, _MM_SWIZ_REG_DACB } _MM_SWIZZLE_ENUM; typedef enum { _MM_BROADCAST32_NONE, _MM_BROADCAST_1X16, _MM_BROADCAST_4X16 } _MM_BROADCAST32_ENUM; typedef enum { _MM_BROADCAST64_NONE, _MM_BROADCAST_1X8, _MM_BROADCAST_4X8 } _MM_BROADCAST64_ENUM; typedef enum { _MM_ROUND_MODE_NEAREST, _MM_ROUND_MODE_DOWN, _MM_ROUND_MODE_UP, _MM_ROUND_MODE_TOWARD_ZERO, _MM_ROUND_MODE_DEFAULT } _MM_ROUND_MODE_ENUM; typedef enum { _MM_EXPADJ_NONE, _MM_EXPADJ_4, _MM_EXPADJ_5, _MM_EXPADJ_8, _MM_EXPADJ_16, _MM_EXPADJ_24, _MM_EXPADJ_31, _MM_EXPADJ_32 } _MM_EXP_ADJ_ENUM; typedef enum { _MM_SCALE_1 = 1, _MM_SCALE_2 = 2, _MM_SCALE_4 = 4, _MM_SCALE_8 = 8 } _MM_INDEX_SCALE_ENUM; typedef enum { _MM_PERM_AAAA = 0x00, _MM_PERM_AAAB = 0x01, _MM_PERM_AAAC = 0x02, _MM_PERM_AAAD = 0x03, _MM_PERM_AABA = 0x04, _MM_PERM_AABB = 0x05, _MM_PERM_AABC = 0x06, _MM_PERM_AABD = 0x07, _MM_PERM_AACA = 0x08, _MM_PERM_AACB = 0x09, _MM_PERM_AACC = 0x0A, _MM_PERM_AACD = 0x0B, _MM_PERM_AADA = 0x0C, _MM_PERM_AADB = 0x0D, _MM_PERM_AADC = 0x0E, _MM_PERM_AADD = 0x0F, _MM_PERM_ABAA = 0x10, _MM_PERM_ABAB = 0x11, _MM_PERM_ABAC = 0x12, _MM_PERM_ABAD = 0x13, _MM_PERM_ABBA = 0x14, _MM_PERM_ABBB = 0x15, _MM_PERM_ABBC = 0x16, _MM_PERM_ABBD = 0x17, _MM_PERM_ABCA = 0x18, _MM_PERM_ABCB = 0x19, _MM_PERM_ABCC = 0x1A, _MM_PERM_ABCD = 0x1B, _MM_PERM_ABDA = 0x1C, _MM_PERM_ABDB = 0x1D, _MM_PERM_ABDC = 0x1E, _MM_PERM_ABDD = 0x1F, _MM_PERM_ACAA = 0x20, _MM_PERM_ACAB = 0x21, _MM_PERM_ACAC = 0x22, _MM_PERM_ACAD = 0x23, _MM_PERM_ACBA = 0x24, _MM_PERM_ACBB = 0x25, _MM_PERM_ACBC = 0x26, _MM_PERM_ACBD = 0x27, _MM_PERM_ACCA = 0x28, _MM_PERM_ACCB = 0x29, _MM_PERM_ACCC = 0x2A, _MM_PERM_ACCD = 0x2B, _MM_PERM_ACDA = 0x2C, _MM_PERM_ACDB = 0x2D, _MM_PERM_ACDC = 0x2E, _MM_PERM_ACDD = 0x2F, _MM_PERM_ADAA = 0x30, _MM_PERM_ADAB = 0x31, _MM_PERM_ADAC = 0x32, _MM_PERM_ADAD = 0x33, _MM_PERM_ADBA = 0x34, _MM_PERM_ADBB = 0x35, _MM_PERM_ADBC = 0x36, _MM_PERM_ADBD = 0x37, _MM_PERM_ADCA = 0x38, _MM_PERM_ADCB = 0x39, _MM_PERM_ADCC = 0x3A, _MM_PERM_ADCD = 0x3B, _MM_PERM_ADDA = 0x3C, _MM_PERM_ADDB = 0x3D, _MM_PERM_ADDC = 0x3E, _MM_PERM_ADDD = 0x3F, _MM_PERM_BAAA = 0x40, _MM_PERM_BAAB = 0x41, _MM_PERM_BAAC = 0x42, _MM_PERM_BAAD = 0x43, _MM_PERM_BABA = 0x44, _MM_PERM_BABB = 0x45, _MM_PERM_BABC = 0x46, _MM_PERM_BABD = 0x47, _MM_PERM_BACA = 0x48, _MM_PERM_BACB = 0x49, _MM_PERM_BACC = 0x4A, _MM_PERM_BACD = 0x4B, _MM_PERM_BADA = 0x4C, _MM_PERM_BADB = 0x4D, _MM_PERM_BADC = 0x4E, _MM_PERM_BADD = 0x4F, _MM_PERM_BBAA = 0x50, _MM_PERM_BBAB = 0x51, _MM_PERM_BBAC = 0x52, _MM_PERM_BBAD = 0x53, _MM_PERM_BBBA = 0x54, _MM_PERM_BBBB = 0x55, _MM_PERM_BBBC = 0x56, _MM_PERM_BBBD = 0x57, _MM_PERM_BBCA = 0x58, _MM_PERM_BBCB = 0x59, _MM_PERM_BBCC = 0x5A, _MM_PERM_BBCD = 0x5B, _MM_PERM_BBDA = 0x5C, _MM_PERM_BBDB = 0x5D, _MM_PERM_BBDC = 0x5E, _MM_PERM_BBDD = 0x5F, _MM_PERM_BCAA = 0x60, _MM_PERM_BCAB = 0x61, _MM_PERM_BCAC = 0x62, _MM_PERM_BCAD = 0x63, _MM_PERM_BCBA = 0x64, _MM_PERM_BCBB = 0x65, _MM_PERM_BCBC = 0x66, _MM_PERM_BCBD = 0x67, _MM_PERM_BCCA = 0x68, _MM_PERM_BCCB = 0x69, _MM_PERM_BCCC = 0x6A, _MM_PERM_BCCD = 0x6B, _MM_PERM_BCDA = 0x6C, _MM_PERM_BCDB = 0x6D, _MM_PERM_BCDC = 0x6E, _MM_PERM_BCDD = 0x6F, _MM_PERM_BDAA = 0x70, _MM_PERM_BDAB = 0x71, _MM_PERM_BDAC = 0x72, _MM_PERM_BDAD = 0x73, _MM_PERM_BDBA = 0x74, _MM_PERM_BDBB = 0x75, _MM_PERM_BDBC = 0x76, _MM_PERM_BDBD = 0x77, _MM_PERM_BDCA = 0x78, _MM_PERM_BDCB = 0x79, _MM_PERM_BDCC = 0x7A, _MM_PERM_BDCD = 0x7B, _MM_PERM_BDDA = 0x7C, _MM_PERM_BDDB = 0x7D, _MM_PERM_BDDC = 0x7E, _MM_PERM_BDDD = 0x7F, _MM_PERM_CAAA = 0x80, _MM_PERM_CAAB = 0x81, _MM_PERM_CAAC = 0x82, _MM_PERM_CAAD = 0x83, _MM_PERM_CABA = 0x84, _MM_PERM_CABB = 0x85, _MM_PERM_CABC = 0x86, _MM_PERM_CABD = 0x87, _MM_PERM_CACA = 0x88, _MM_PERM_CACB = 0x89, _MM_PERM_CACC = 0x8A, _MM_PERM_CACD = 0x8B, _MM_PERM_CADA = 0x8C, _MM_PERM_CADB = 0x8D, _MM_PERM_CADC = 0x8E, _MM_PERM_CADD = 0x8F, _MM_PERM_CBAA = 0x90, _MM_PERM_CBAB = 0x91, _MM_PERM_CBAC = 0x92, _MM_PERM_CBAD = 0x93, _MM_PERM_CBBA = 0x94, _MM_PERM_CBBB = 0x95, _MM_PERM_CBBC = 0x96, _MM_PERM_CBBD = 0x97, _MM_PERM_CBCA = 0x98, _MM_PERM_CBCB = 0x99, _MM_PERM_CBCC = 0x9A, _MM_PERM_CBCD = 0x9B, _MM_PERM_CBDA = 0x9C, _MM_PERM_CBDB = 0x9D, _MM_PERM_CBDC = 0x9E, _MM_PERM_CBDD = 0x9F, _MM_PERM_CCAA = 0xA0, _MM_PERM_CCAB = 0xA1, _MM_PERM_CCAC = 0xA2, _MM_PERM_CCAD = 0xA3, _MM_PERM_CCBA = 0xA4, _MM_PERM_CCBB = 0xA5, _MM_PERM_CCBC = 0xA6, _MM_PERM_CCBD = 0xA7, _MM_PERM_CCCA = 0xA8, _MM_PERM_CCCB = 0xA9, _MM_PERM_CCCC = 0xAA, _MM_PERM_CCCD = 0xAB, _MM_PERM_CCDA = 0xAC, _MM_PERM_CCDB = 0xAD, _MM_PERM_CCDC = 0xAE, _MM_PERM_CCDD = 0xAF, _MM_PERM_CDAA = 0xB0, _MM_PERM_CDAB = 0xB1, _MM_PERM_CDAC = 0xB2, _MM_PERM_CDAD = 0xB3, _MM_PERM_CDBA = 0xB4, _MM_PERM_CDBB = 0xB5, _MM_PERM_CDBC = 0xB6, _MM_PERM_CDBD = 0xB7, _MM_PERM_CDCA = 0xB8, _MM_PERM_CDCB = 0xB9, _MM_PERM_CDCC = 0xBA, _MM_PERM_CDCD = 0xBB, _MM_PERM_CDDA = 0xBC, _MM_PERM_CDDB = 0xBD, _MM_PERM_CDDC = 0xBE, _MM_PERM_CDDD = 0xBF, _MM_PERM_DAAA = 0xC0, _MM_PERM_DAAB = 0xC1, _MM_PERM_DAAC = 0xC2, _MM_PERM_DAAD = 0xC3, _MM_PERM_DABA = 0xC4, _MM_PERM_DABB = 0xC5, _MM_PERM_DABC = 0xC6, _MM_PERM_DABD = 0xC7, _MM_PERM_DACA = 0xC8, _MM_PERM_DACB = 0xC9, _MM_PERM_DACC = 0xCA, _MM_PERM_DACD = 0xCB, _MM_PERM_DADA = 0xCC, _MM_PERM_DADB = 0xCD, _MM_PERM_DADC = 0xCE, _MM_PERM_DADD = 0xCF, _MM_PERM_DBAA = 0xD0, _MM_PERM_DBAB = 0xD1, _MM_PERM_DBAC = 0xD2, _MM_PERM_DBAD = 0xD3, _MM_PERM_DBBA = 0xD4, _MM_PERM_DBBB = 0xD5, _MM_PERM_DBBC = 0xD6, _MM_PERM_DBBD = 0xD7, _MM_PERM_DBCA = 0xD8, _MM_PERM_DBCB = 0xD9, _MM_PERM_DBCC = 0xDA, _MM_PERM_DBCD = 0xDB, _MM_PERM_DBDA = 0xDC, _MM_PERM_DBDB = 0xDD, _MM_PERM_DBDC = 0xDE, _MM_PERM_DBDD = 0xDF, _MM_PERM_DCAA = 0xE0, _MM_PERM_DCAB = 0xE1, _MM_PERM_DCAC = 0xE2, _MM_PERM_DCAD = 0xE3, _MM_PERM_DCBA = 0xE4, _MM_PERM_DCBB = 0xE5, _MM_PERM_DCBC = 0xE6, _MM_PERM_DCBD = 0xE7, _MM_PERM_DCCA = 0xE8, _MM_PERM_DCCB = 0xE9, _MM_PERM_DCCC = 0xEA, _MM_PERM_DCCD = 0xEB, _MM_PERM_DCDA = 0xEC, _MM_PERM_DCDB = 0xED, _MM_PERM_DCDC = 0xEE, _MM_PERM_DCDD = 0xEF, _MM_PERM_DDAA = 0xF0, _MM_PERM_DDAB = 0xF1, _MM_PERM_DDAC = 0xF2, _MM_PERM_DDAD = 0xF3, _MM_PERM_DDBA = 0xF4, _MM_PERM_DDBB = 0xF5, _MM_PERM_DDBC = 0xF6, _MM_PERM_DDBD = 0xF7, _MM_PERM_DDCA = 0xF8, _MM_PERM_DDCB = 0xF9, _MM_PERM_DDCC = 0xFA, _MM_PERM_DDCD = 0xFB, _MM_PERM_DDDA = 0xFC, _MM_PERM_DDDB = 0xFD, _MM_PERM_DDDC = 0xFE, _MM_PERM_DDDD = 0xFF } _MM_PERM_ENUM; typedef enum { _MM_UPCONV_PS_NONE, _MM_UPCONV_PS_FLOAT16, _MM_UPCONV_PS_UINT8, _MM_UPCONV_PS_SINT8, _MM_UPCONV_PS_UINT16, _MM_UPCONV_PS_SINT16 } _MM_UPCONV_PS_ENUM; # 308 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_EPI32_NONE, _MM_UPCONV_EPI32_UINT8, _MM_UPCONV_EPI32_SINT8, _MM_UPCONV_EPI32_UINT16, _MM_UPCONV_EPI32_SINT16 } _MM_UPCONV_EPI32_ENUM; # 333 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 340 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_PD_NONE } _MM_UPCONV_PD_ENUM; # 362 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_UPCONV_EPI64_NONE } _MM_UPCONV_EPI64_ENUM; # 407 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_DOWNCONV_PS_NONE, _MM_DOWNCONV_PS_FLOAT16, _MM_DOWNCONV_PS_UINT8, _MM_DOWNCONV_PS_SINT8, _MM_DOWNCONV_PS_UINT16, _MM_DOWNCONV_PS_SINT16 } _MM_DOWNCONV_PS_ENUM; typedef enum { _MM_DOWNCONV_EPI32_NONE, _MM_DOWNCONV_EPI32_UINT8, _MM_DOWNCONV_EPI32_SINT8, _MM_DOWNCONV_EPI32_UINT16, _MM_DOWNCONV_EPI32_SINT16 } _MM_DOWNCONV_EPI32_ENUM; typedef enum { _MM_DOWNCONV_PD_NONE } _MM_DOWNCONV_PD_ENUM; typedef enum { _MM_DOWNCONV_EPI64_NONE } _MM_DOWNCONV_EPI64_ENUM; # 480 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 514 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 538 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 648 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 745 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 788 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_CMPINT_EQ, _MM_CMPINT_LT, _MM_CMPINT_LE, _MM_CMPINT_UNUSED, _MM_CMPINT_NE, _MM_CMPINT_NLT, _MM_CMPINT_NLE } _MM_CMPINT_ENUM; # 813 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 838 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 846 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 871 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 878 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 908 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 921 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 951 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 964 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1005 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1038 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1056 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1107 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1192 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1299 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1386 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1443 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1465 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef enum { _MM_MANT_NORM_1_2, _MM_MANT_NORM_p5_2, _MM_MANT_NORM_p5_1, _MM_MANT_NORM_p75_1p5 } _MM_MANTISSA_NORM_ENUM; typedef enum { _MM_MANT_SIGN_src, _MM_MANT_SIGN_zero, _MM_MANT_SIGN_nan } _MM_MANTISSA_SIGN_ENUM; # 1500 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1596 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1603 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1610 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1617 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1624 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1631 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1638 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1719 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1726 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1733 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1808 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1831 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1882 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1904 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1926 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1948 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 1970 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2011 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2093 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2111 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2157 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2196 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2224 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2252 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2281 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2314 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2373 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2390 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2404 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2421 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2437 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2476 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2516 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 2930 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3012 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3031 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3061 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3176 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3193 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3210 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3235 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3268 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3340 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3347 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3355 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3362 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3370 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3381 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3600 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3607 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3615 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3622 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3630 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3637 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3661 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3668 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3676 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3683 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3691 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3698 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3706 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3713 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3735 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3742 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3750 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3757 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3909 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3916 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3924 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 3931 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4094 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4102 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4110 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4118 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4131 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4138 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4146 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4154 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4163 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4171 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4179 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4187 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4196 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4204 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4212 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4219 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4227 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4235 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4243 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4251 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4259 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4267 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4275 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4283 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4291 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4298 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4306 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4313 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4431 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4444 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4507 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4520 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4529 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4554 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4562 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4570 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4632 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4642 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4653 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4663 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4679 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4699 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4720 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4749 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4788 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4797 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4815 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4829 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4843 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4857 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4866 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4888 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4902 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4916 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4930 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4981 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4991 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5003 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5013 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5024 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5034 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5046 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5056 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5067 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5077 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5100 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5111 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5121 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5144 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5170 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5301 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5311 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5321 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5331 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5338 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5345 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5355 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5365 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5378 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5385 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5392 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5427 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5443 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5474 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5488 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5502 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5520 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5603 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5610 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5617 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5624 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5631 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5638 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5645 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5652 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5659 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5666 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 5733 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6341 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6366 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6374 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6399 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6407 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6432 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6440 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6465 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6473 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6506 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6531 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6539 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6564 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6614 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6639 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6670 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6677 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6702 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6709 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6734 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6765 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6772 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6797 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6804 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6829 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6860 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6867 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6892 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6899 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6924 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6955 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6962 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6987 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 6994 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7019 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7422 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7430 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7445 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7453 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7498 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7506 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7521 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7529 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7546 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7554 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7571 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7579 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7627 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7635 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7650 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7658 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7673 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7681 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7696 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7704 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7721 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7729 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7744 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7752 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 7774 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8740 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8803 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8820 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8891 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 8909 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10346 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10386 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 10548 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 typedef __m128i __m128bh; typedef __m256i __m256bh; typedef __m512i __m512bh; # 11248 "/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h" 3 # 4 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): /share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ : Preprocess stderr after filtering: In file included from /tmp/petsc-jcc9mra8/config.headers/conftest.c(3):/share/apps/intel-2020.2/compilers_and_libraries_2020.2.254/linux/compiler/include/icc/zmmintrin.h(10): error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^: ============================================================================================= TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:216) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.headers/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } child config.headers 9.177181 ============================================================================================= TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest to see if it can be run Executing: /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-jcc9mra8/config.utilities.cacheDetails/conftest Defined "LEVEL1_DCACHE_LINESIZE" to "64" child config.utilities.cacheDetails 0.538958 ============================================================================================= TESTING: check_struct_sigaction from config.types(config/BuildSystem/config/types.py:42) Checks if "struct sigaction" exists in signal.h. This check is for C89 check. Checking for type: struct sigaction ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.types/conftest.c(11): error: incomplete type is not allowed struct sigaction a;; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.types/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { struct sigaction a;; return 0; } struct sigaction found ============================================================================================= TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:48) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { __int64 a;; return 0; } __int64 found Defined "HAVE___INT64" to "1" ============================================================================================= TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:54) Checks for types associated with sizes, such as size_t. Checking for type: size_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { size_t a;; return 0; } size_t found ============================================================================================= TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:64) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { off_t a;; return 0; } off_t found ============================================================================================= TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:59) Checks for types associated with integers, such as int32_t. Checking for type: int32_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } int32_t found ============================================================================================= TESTING: checkPID from config.types(config/BuildSystem/config/types.py:70) Checks for pid_t, and defines it if necessary Checking for type: pid_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { pid_t a;; return 0; } pid_t found ============================================================================================= TESTING: checkUID from config.types(config/BuildSystem/config/types.py:74) Checks for uid_t and gid_t, and defines them if necessary Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c ============================================================================================= TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:81) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.types/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.types/conftest.o -lstdc++ -ldl Defined "HAVE_C99_COMPLEX" to "1" ============================================================================================= TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:92) Check for complex numbers in namespace std ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.types/conftest -g /tmp/petsc-jcc9mra8/config.types/conftest.o -lstdc++ -ldl Defined "HAVE_CXX_COMPLEX" to "1" ============================================================================================= TESTING: checkConst from config.types(config/BuildSystem/config/types.py:103) Checks for working const, and if not found defines it to empty string ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(void *)==8)*2-1]; Defined "SIZEOF_VOID_P" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(short)==2)*2-1]; Defined "SIZEOF_SHORT" to "2" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(int)==4)*2-1]; Defined "SIZEOF_INT" to "4" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long)==8)*2-1]; Defined "SIZEOF_LONG" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long long)==8)*2-1]; Defined "SIZEOF_LONG_LONG" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: enum ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(enum{ENUM_DUMMY})==4)*2-1]; Defined "SIZEOF_ENUM" to "4" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:159) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(size_t)==8)*2-1]; Defined "SIZEOF_SIZE_T" to "8" ============================================================================================= TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:193) ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __attribute__((visibility ("default"))) int foo(void);; return 0; } Defined "USE_VISIBILITY_C" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __attribute__((visibility ("default"))) int foo(void);; return 0; } Defined "USE_VISIBILITY_CXX" to "1" ============================================================================================= TESTING: checkMaxPathLen from config.types(config/BuildSystem/config/types.py:215) Determining PETSC_MAX_PATH_LEN ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.types/conftest.o -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(MAXPATHLEN) # define PETSC_MAX_PATH_LEN MAXPATHLEN #elif defined(MAX_PATH) # define PETSC_MAX_PATH_LEN MAX_PATH #elif defined(_MAX_PATH) # define PETSC_MAX_PATH_LEN _MAX_PATH #else # define PETSC_MAX_PATH_LEN 4096 #endif #define xstr(s) str(s) #define str(s) #s char petsc_max_path_len[] = xstr(PETSC_MAX_PATH_LEN); int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(MAXPATHLEN) # define PETSC_MAX_PATH_LEN MAXPATHLEN #elif defined(MAX_PATH) # define PETSC_MAX_PATH_LEN MAX_PATH #elif defined(_MAX_PATH) # define PETSC_MAX_PATH_LEN _MAX_PATH #else # define PETSC_MAX_PATH_LEN 4096 #endif #define xstr(s) str(s) #define str(s) #s char petsc_max_path_len[] = xstr(PETSC_MAX_PATH_LEN); Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.types/conftest.c Defined "MAX_PATH_LEN" to "4096" child config.types 3.551569 ============================================================================================= TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:29) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 child PETSc.options.memAlign 0.002784 ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lfpe -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lfpe ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lsocket -lnsl -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lsocket ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lfpe -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lfpe ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lsocket -lnsl -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: cannot find -lsocket ============================================================================================= TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:264) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include double sin(double); static void _check_sin() { double x,y; scanf("%lf",&x); y = sin(x); printf("%f",y); ; } #include double floor(double); static void _check_floor() { double x,y; scanf("%lf",&x); y = floor(x); printf("%f",y); ; } #include double log10(double); static void _check_log10() { double x,y; scanf("%lf",&x); y = log10(x); printf("%f",y); ; } #include double pow(double, double); static void _check_pow() { double x,y; scanf("%lf",&x); y = pow(x,x); printf("%f",y); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl CheckMath: using math library [] ============================================================================================= TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:283) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_erf() { double (*checkErf)(double) = erf;double x = 0,y; y = (*checkErf)(x); } int main() { _check_erf();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl erf() found Defined "HAVE_ERF" to "1" ============================================================================================= TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:292) Check for tgamma() in libm, the math library Checking for functions [tgamma] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_tgamma() { double (*checkTgamma)(double) = tgamma;double x = 0,y; y = (*checkTgamma)(x); } int main() { _check_tgamma();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl tgamma() found Defined "HAVE_TGAMMA" to "1" ============================================================================================= TESTING: checkMathLgamma from config.libraries(config/BuildSystem/config/libraries.py:301) Check for lgamma() in libm, the math library Checking for functions [lgamma] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include #include static void _check_lgamma() { double (*checkLgamma)(double) = lgamma;double x = 1,y; y = (*checkLgamma)(x);if (y != 0.) abort(); } int main() { _check_lgamma();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl lgamma() found Defined "HAVE_LGAMMA" to "1" ============================================================================================= TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:314) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_FENV_H" to "1" ============================================================================================= TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:322) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } int main() { _check_log2();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl log2() found Defined "HAVE_LOG2" to "1" ============================================================================================= TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:331) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): warning #266: function "clock_gettime" declared implicitly static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for /tmp/petsc-jcc9mra8/config.libraries/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Compile failed inside link Checking for functions [clock_gettime] in library ['rt'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): warning #266: function "clock_gettime" declared implicitly static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ /tmp/petsc-jcc9mra8/config.libraries/conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for /tmp/petsc-jcc9mra8/config.libraries/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Compile failed inside link Warning: No realtime library found ============================================================================================= TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:347) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -ldl -lstdc++ -ldl Defined "HAVE_LIBDL" to "1" Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_DLFCN_H" to "1" child config.libraries 4.416292 ============================================================================================= TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE, PETSC_USE_FORTRAN_KERNELS, and PETSC_USE_AVX512_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" Defined "USE_BACKWARD_LOOP" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.o: In function `_check_bgl_perfctr_void': /tmp/petsc-jcc9mra8/config.libraries/conftest.c:5: undefined reference to `bgl_perfctr_void' Checking for functions [ADIOI_BGL_Open] in library [''] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.o: In function `_check_ADIOI_BGL_Open': /tmp/petsc-jcc9mra8/config.libraries/conftest.c:5: undefined reference to `ADIOI_BGL_Open' *********BGL/IBM test failure Defined "USE_AVX512_KERNELS" to "1" Defined "Alignx(a,b)" to " " ============================================================================================= TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:95) Sets PETSC_IS_COLORING_VALUE_TYPE, PETSC_MPIU_IS_COLORING_VALUE_TYPE, and PETSC_IS_COLORING_MAX as required by ISColoring Defined "MPIU_IS_COLORING_VALUE_TYPE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "USHRT_MAX" Defined "IS_COLORING_VALUE_TYPE" to "short" Defined "IS_COLORING_VALUE_TYPE_F" to "integer2" child PETSc.options.libraryOptions 0.754608 child config.atomics 0.000029 ============================================================================================= TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:106) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SYSINFO" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.c(9): error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ /tmp/petsc-jcc9mra8/config.functions/conftest.c(13): warning #266: function "sysinfo" declared implicitly char buf[10]; long count=10; sysinfo(1, buf, count); ^ compilation aborted for /tmp/petsc-jcc9mra8/config.functions/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_SYS_SYSINFO_H # include #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ============================================================================================= TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl ============================================================================================= TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:131) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl ============================================================================================= TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:137) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_VSNPRINTF" to "1" ============================================================================================= TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:167) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.c(6): error: incomplete type is not allowed struct timespec tp; ^ /tmp/petsc-jcc9mra8/config.functions/conftest.c(9): warning #266: function "nanosleep" declared implicitly nanosleep(&tp,0); ^ compilation aborted for /tmp/petsc-jcc9mra8/config.functions/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Compile failed inside link ============================================================================================= TESTING: checkMemmove from config.functions(config/BuildSystem/config/functions.py:173) Check for functional memmove() - as MS VC requires correct includes to for this test ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char c1[1], c2[1] = "c"; size_t n=1; memmove(c1,c2,n); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_MEMMOVE" to "1" ============================================================================================= TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:143) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.functions/conftest -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "SIGNAL_CAST" to " " ============================================================================================= TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:153) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.c(6): error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.functions/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ============================================================================================= TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:159) Checks whether the variable argument list functionality is working ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_VA_COPY" to "1" ============================================================================================= TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:85) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [_lseek getrusage getwd fork sleep _snprintf time _pipe clock dlerror _getcwd getpagesize _access gethostname memalign strcasecmp stricmp _set_output_format getdomainname _sleep fpsetsticky bzero getcwd dlclose _mkdir dlopen gethostbyname drand48 lseek access dlsym fpresetsticky readlink socket rand sbreak popen snprintf realpath PXFGETARG uname usleep] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); char getrusage(); char getwd(); char fork(); char sleep(); char _snprintf(); char time(); char _pipe(); char clock(); char dlerror(); char _getcwd(); char getpagesize(); char _access(); char gethostname(); char memalign(); char strcasecmp(); char stricmp(); char _set_output_format(); char getdomainname(); char _sleep(); char fpsetsticky(); char bzero(); char getcwd(); char dlclose(); char _mkdir(); char dlopen(); char gethostbyname(); char drand48(); char lseek(); char access(); char dlsym(); char fpresetsticky(); char readlink(); char socket(); char rand(); char sbreak(); char popen(); char snprintf(); char realpath(); char PXFGETARG(); char uname(); char usleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_fpsetsticky) || defined (__stub___fpsetsticky) fpsetsticky_will_always_fail_with_ENOSYS(); #else fpsetsticky(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_fpresetsticky) || defined (__stub___fpresetsticky) fpresetsticky_will_always_fail_with_ENOSYS(); #else fpresetsticky(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:77: warning: the `getwd' function is dangerous and should not be used. /tmp/petsc-jcc9mra8/config.functions/conftest.c:65: undefined reference to `_lseek' /tmp/petsc-jcc9mra8/config.functions/conftest.c:95: undefined reference to `_snprintf' /tmp/petsc-jcc9mra8/config.functions/conftest.c:107: undefined reference to `_pipe' /tmp/petsc-jcc9mra8/config.functions/conftest.c:125: undefined reference to `_getcwd' /tmp/petsc-jcc9mra8/config.functions/conftest.c:137: undefined reference to `_access' /tmp/petsc-jcc9mra8/config.functions/conftest.c:161: undefined reference to `stricmp' /tmp/petsc-jcc9mra8/config.functions/conftest.c:167: undefined reference to `_set_output_format' /tmp/petsc-jcc9mra8/config.functions/conftest.c:179: undefined reference to `_sleep' /tmp/petsc-jcc9mra8/config.functions/conftest.c:185: undefined reference to `fpsetsticky' /tmp/petsc-jcc9mra8/config.functions/conftest.c:209: undefined reference to `_mkdir' /tmp/petsc-jcc9mra8/config.functions/conftest.c:251: undefined reference to `fpresetsticky' /tmp/petsc-jcc9mra8/config.functions/conftest.c:275: undefined reference to `sbreak' /tmp/petsc-jcc9mra8/config.functions/conftest.c:299: undefined reference to `PXFGETARG' Checking for functions [getrusage fork time clock dlerror getpagesize gethostname memalign strcasecmp getdomainname bzero] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); char fork(); char time(); char clock(); char dlerror(); char getpagesize(); char gethostname(); char memalign(); char strcasecmp(); char getdomainname(); char bzero(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_TIME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_GETPAGESIZE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_BZERO" to "1" Checking for functions [dlclose dlopen gethostbyname drand48 dlsym readlink socket rand popen realpath uname usleep] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); char dlopen(); char gethostbyname(); char drand48(); char dlsym(); char readlink(); char socket(); char rand(); char popen(); char realpath(); char uname(); char usleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_RAND" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Checking for functions [_lseek] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_lseek' Checking for functions [getwd] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [sleep] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_snprintf] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_snprintf' Checking for functions [_pipe] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _pipe(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_pipe' Checking for functions [_getcwd] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_getcwd' Checking for functions [_access] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_access' Checking for functions [stricmp] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `stricmp' Checking for functions [_set_output_format] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_set_output_format' Checking for functions [_sleep] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_sleep' Checking for functions [fpsetsticky] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fpsetsticky(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fpsetsticky) || defined (__stub___fpsetsticky) fpsetsticky_will_always_fail_with_ENOSYS(); #else fpsetsticky(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `fpsetsticky' Checking for functions [getcwd] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_mkdir] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _mkdir(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `_mkdir' Checking for functions [lseek] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [fpresetsticky] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fpresetsticky(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fpresetsticky) || defined (__stub___fpresetsticky) fpresetsticky_will_always_fail_with_ENOSYS(); #else fpresetsticky(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `fpresetsticky' Checking for functions [sbreak] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `sbreak' Checking for functions [snprintf] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [PXFGETARG] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.functions/conftest.o: In function `main': /tmp/petsc-jcc9mra8/config.functions/conftest.c:24: undefined reference to `PXFGETARG' ============================================================================================= TESTING: checkMmap from config.functions(config/BuildSystem/config/functions.py:179) Check for functional mmap() to allocate shared memory and define HAVE_MMAP ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.functions/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { int fd; fd=open("/tmp/file",O_RDWR); mmap((void*)0,100,PROT_READ|PROT_WRITE,MAP_SHARED,fd,0); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.functions/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_MMAP" to "1" child config.functions 11.786225 ============================================================================================= TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() child config.utilities.getResidentSetSize 0.004390 ============================================================================================= TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Checking for functions [] in library [''] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.libraries -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.F90 Successful compile: Source: program main integer i character*(80) arg i = command_argument_count() call get_command_argument(i,arg) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" child config.utilities.fortranCommandLine 0.413179 ============================================================================================= TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 4 stderr: /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c(4): catastrophic error: cannot open source file "sysctl.h" #include ^ compilation aborted for /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" child config.utilities.featureTestMacros 0.505238 ============================================================================================= TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:55) Checks if u_short is undefined ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c(6): error: identifier "u_short" is undefined u_short foo; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } Defined "NEEDS_UTYPE_TYPEDEFS" to "1" ============================================================================================= TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:61) Checks for SOCKETS ============================================================================================= TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:79) Check for missing signals, and define MISSING_ if necessary ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ============================================================================================= TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:96) ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.missing -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest -g /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -lstdc++ -ldl ============================================================================================= TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:121) ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.missing -g -fPIC -std=c++14 /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.utilities.missing/conftest -g /tmp/petsc-jcc9mra8/config.utilities.missing/conftest.o -lstdc++ -ldl child config.utilities.missing 3.870883 ============================================================================================= TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sigfpe.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sigfpe.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "sigfpe.h" #include ^: Checking for header: fpxcp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "fpxcp.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "fpxcp.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "fpxcp.h" #include ^: Checking for header: floatingpoint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 /tmp/petsc-jcc9mra8/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" # 1 "/usr/include/stdc-predef.h" 1 3 # 1 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 # 1 "/tmp/petsc-jcc9mra8/config.headers/conffix.h" 1 # 3 "/tmp/petsc-jcc9mra8/config.headers/conftest.c" 2 stderr: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "floatingpoint.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "floatingpoint.h" #include ^ : Preprocess stderr after filtering: /tmp/petsc-jcc9mra8/config.headers/conftest.c(3): error #2379: cannot open source file "floatingpoint.h" #include ^: child config.utilities.FPTrap 0.330343 ============================================================================================= TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:40) Choose between real and complex numbers Scalar type is real ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest -fPIC -g /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISNORMAL" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest -fPIC -g /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISNAN" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest -fPIC -g /tmp/petsc-jcc9mra8/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISINF" to "1" ============================================================================================= TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:81) Set the default real number precision for PETSc objects Checking C compiler works with __float128 Checking for functions [logq] in library ['quadmath'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_logq() { __float128 f; logq(f);; } int main() { _check_logq();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_LIBQUADMATH" to "1" C compiler with quadmath library Checking Fortran works with quadmath library Checking for functions [ ] in library ['quadmath'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.libraries -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.F90 Successful compile: Source: program main real*16 s,w; w = 2.0 ;s = cos(w) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_LIBQUADMATH" to "1" Fortran works with quadmath library Checking for functions [logq] in library ['quadmath'] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_logq() { __float128 f; logq(f);; } int main() { _check_logq();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_LIBQUADMATH" to "1" Adding ['quadmath'] to LIBS Defined "HAVE_REAL___FLOAT128" to "1" Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double child PETSc.options.scalarTypes 2.362486 ============================================================================================= TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/mkdir...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mkdir...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/mkdir...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/mkdir...not found Checking for program /share/apps/gmake-4.3/bin/mkdir...not found Checking for program /home/blaise/bin/mkdir...not found Checking for program /usr/lib64/qt-3.3/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /usr/bin/mkdir...found Executing: /usr/bin/mkdir -p .conftest/tmp Adding -p flag to /usr/bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/usr/bin/mkdir -p" ============================================================================================= TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/autoreconf...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/autoreconf...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/autoreconf...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/autoreconf...not found Checking for program /share/apps/gmake-4.3/bin/autoreconf...not found Checking for program /home/blaise/bin/autoreconf...not found Checking for program /usr/lib64/qt-3.3/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found Executing: ['/usr/bin/autoreconf'] autoreconf test successful! Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/libtoolize...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/libtoolize...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/libtoolize...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/libtoolize...not found Checking for program /share/apps/gmake-4.3/bin/libtoolize...not found Checking for program /home/blaise/bin/libtoolize...not found Checking for program /usr/lib64/qt-3.3/bin/libtoolize...not found Checking for program /usr/local/bin/libtoolize...not found Checking for program /usr/bin/libtoolize...found ============================================================================================= TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:71) Check for the programs needed to build and run PETSc Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/sh...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/sh...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/sh...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/sh...not found Checking for program /share/apps/gmake-4.3/bin/sh...not found Checking for program /home/blaise/bin/sh...not found Checking for program /usr/lib64/qt-3.3/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /usr/bin/sh...found Defined make macro "SHELL" to "/usr/bin/sh" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/sed...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/sed...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/sed...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/sed...not found Checking for program /share/apps/gmake-4.3/bin/sed...not found Checking for program /home/blaise/bin/sed...not found Checking for program /usr/lib64/qt-3.3/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" Executing: /usr/bin/sed -i s/sed/sd/g "/tmp/petsc-jcc9mra8/config.programs/sed1" Adding SEDINPLACE cmd: /usr/bin/sed -i Defined make macro "SEDINPLACE" to "/usr/bin/sed -i" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/mv...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mv...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/mv...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/mv...not found Checking for program /share/apps/gmake-4.3/bin/mv...not found Checking for program /home/blaise/bin/mv...not found Checking for program /usr/lib64/qt-3.3/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /usr/bin/mv...found Defined make macro "MV" to "/usr/bin/mv" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/cp...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/cp...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/cp...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/cp...not found Checking for program /share/apps/gmake-4.3/bin/cp...not found Checking for program /home/blaise/bin/cp...not found Checking for program /usr/lib64/qt-3.3/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /usr/bin/cp...found Defined make macro "CP" to "/usr/bin/cp" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/grep...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/grep...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/grep...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/grep...not found Checking for program /share/apps/gmake-4.3/bin/grep...not found Checking for program /home/blaise/bin/grep...not found Checking for program /usr/lib64/qt-3.3/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/rm...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/rm...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/rm...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/rm...not found Checking for program /share/apps/gmake-4.3/bin/rm...not found Checking for program /home/blaise/bin/rm...not found Checking for program /usr/lib64/qt-3.3/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /usr/bin/rm...found Defined make macro "RM" to "/usr/bin/rm -f" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/diff...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/diff...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/diff...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/diff...not found Checking for program /share/apps/gmake-4.3/bin/diff...not found Checking for program /home/blaise/bin/diff...not found Checking for program /usr/lib64/qt-3.3/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/tmp/petsc-jcc9mra8/config.programs/diff1" "/tmp/petsc-jcc9mra8/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/ps...not found Unable to find programs ['ps'] providing listing of the specific search path Warning accessing /usr/ucb gives errors: must be str, not builtin_function_or_method Warning accessing /usr/usb gives errors: must be str, not builtin_function_or_method Defined make macro "PYTHON" to "/usr/bin/python3" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/m4...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/m4...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/m4...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/m4...not found Checking for program /share/apps/gmake-4.3/bin/m4...not found Checking for program /home/blaise/bin/m4...not found Checking for program /usr/lib64/qt-3.3/bin/m4...not found Checking for program /usr/local/bin/m4...not found Checking for program /usr/bin/m4...found Defined make macro "M4" to "/usr/bin/m4" child config.programs 2.194621 ============================================================================================= TESTING: consistencyChecks from config.packages.make(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.make(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default ============================================================================================= TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:96) Check Guesses for GNU make Executing: gmake --version stdout: GNU Make 4.3 Built for x86_64-pc-linux-gnu Copyright (C) 1988-2020 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/gmake...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/gmake...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/gmake...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/gmake...not found Checking for program /share/apps/gmake-4.3/bin/gmake...found Defined make macro "MAKE" to "/share/apps/gmake-4.3/bin/gmake" Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/make...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/make...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/make...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/make...not found Checking for program /share/apps/gmake-4.3/bin/make...found Defined make macro "MAKE_USER" to "make" ============================================================================================= TESTING: setupGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:150) Setup other GNU make stuff Executing: uname -s stdout: Linux Executing: uname -s stdout: Linux Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} Defined make macro "OMAKE_PRINTDIR " to "/share/apps/gmake-4.3/bin/gmake --print-directory" Defined make macro "OMAKE" to "/share/apps/gmake-4.3/bin/gmake --no-print-directory" Defined make macro "MAKE_PAR_OUT_FLG" to "--output-sync=recurse" ============================================================================================= TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:197) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 48 cores: using make_np = 32 Defined make macro "MAKE_NP" to "32" Defined make macro "MAKE_TEST_NP" to "21" Defined make macro "MAKE_LOAD" to "72.0" Defined make macro "NPMAX" to "48" child config.packages.make 0.073964 ============================================================================================= TESTING: consistencyChecks from config.packages.valgrind(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:895) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Compiler specific search VALGRIND: ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Found header files [] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Checking for headers ['valgrind/valgrind.h'] in Compiler specific search VALGRIND: ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Checking include with compiler flags var CPPFLAGS ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Found header files ['valgrind/valgrind.h'] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.valgrind/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.packages.valgrind/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { RUNNING_ON_VALGRIND; ; return 0; } Defined "HAVE_VALGRIND" to "1" Executing: uname -s stdout: Linux Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "valgrind/config.h" ;petscpkgver(VERSION); Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -std=c99 /tmp/petsc-jcc9mra8/config.packages.valgrind/conftest.c For valgrind need <= 3.15.0 <= child config.packages.valgrind 0.375695 ============================================================================================= TESTING: consistencyChecks from config.packages.thrust(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.thrust 0.003444 ============================================================================================= TESTING: consistencyChecks from config.packages.cuda(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.cuda 0.002509 ============================================================================================= TESTING: consistencyChecks from config.packages.OpenMPI(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.OpenMPI 0.001764 Executing: uname -s stdout: Linux ============================================================================================= TESTING: consistencyChecks from config.packages.MPICH(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.MPICH 0.015634 ============================================================================================= TESTING: consistencyChecks from config.packages.MPI(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.MPI(config/BuildSystem/config/package.py:870) ============================================================================================= TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:695) ================================================================================== Checking for a functional MPI Checking for library in User specified root directory MPI: [] Contents: ['libfabric', 'include', 'bin', 'modulefiles', 'lib', 'etc'] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Checking for optional headers [] in User specified root directory MPI: ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Found header files [] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Checking for headers ['mpi.h'] in User specified root directory MPI: ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Checking include with compiler flags var CPPFLAGS ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.headers -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Found header files ['mpi.h'] in ['/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include'] ============================================================================================= TESTING: checkMPIDistro from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:556) Determine if MPICH_NUMVERSION, OMPI_MAJOR_VERSION or MSMPI_VER exist in mpi.h Used for consistency checking of MPI installation at compile time ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include const char *mpich_ver = I_MPI_VERSION; int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include const char *mpich_ver = I_MPI_VERSION; Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.packages.MPI -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Unable to parse I_MPI version from header. Probably a buggy preprocessor ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c(4): warning #69: integer conversion resulted in truncation int mpich_ver = I_MPI_NUMVERSION; ^ Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = I_MPI_NUMVERSION; int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = I_MPI_NUMVERSION; Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.packages.MPI -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Defined "HAVE_I_MPI_NUMVERSION" to "20190008300" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 2 stderr: /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c(4): error: identifier "MVAPICH2_NUMVERSION" is undefined int mpich_ver = MVAPICH2_NUMVERSION; ^ compilation aborted for /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MVAPICH2_NUMVERSION; int main() { ; return 0; } ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.packages.MPI -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Defined "HAVE_MPICH_NUMVERSION" to "30300300" Executing: uname -s stdout: Linux ============================================================================================= TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:331) Check for functions added to the interface in MPI-2 ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_FINALIZED" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_IN_PLACE" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Reduce_local(0, 0, 0, MPI_INT, MPI_SUM));; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_REDUCE_LOCAL" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char version[MPI_MAX_LIBRARY_VERSION_STRING];int verlen;if (MPI_Get_library_version(version,&verlen)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_GET_LIBRARY_VERSION" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int base[100]; MPI_Win win; if (MPI_Win_create(base,100,4,MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_ONE_SIDED" to "1" ============================================================================================= TESTING: configureMPI3 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:376) Check for functions added to the interface in MPI-3 ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm scomm; MPI_Aint size=128; int disp_unit=8,*baseptr; MPI_Win win; if (MPI_Comm_split_type(MPI_COMM_WORLD, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, &scomm)); if (MPI_Win_allocate_shared(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); if (MPI_Win_shared_query(win,0,&size,&disp_unit,&baseptr)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_PROCESS_SHARED_MEMORY" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int send=0,recv,counts[2]={1,1},displs[2]={1,2}; MPI_Request req; if (MPI_Iscatter(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Iscatterv(&send,counts,displs,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Igather(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Igatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Iallgather(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)); if (MPI_Iallgatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,MPI_COMM_WORLD,&req)); if (MPI_Ialltoall(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_NONBLOCKING_COLLECTIVES" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm distcomm; MPI_Request req; if (MPI_Dist_graph_create_adjacent(MPI_COMM_WORLD,0,0,MPI_WEIGHTS_EMPTY,0,0,MPI_WEIGHTS_EMPTY,MPI_INFO_NULL,0,&distcomm)); if (MPI_Neighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm)); if (MPI_Ineighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm,&req)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_NEIGHBORHOOD_COLLECTIVES" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_GET_ACCUMULATE" to "1" ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_RGET" to "1" ============================================================================================= TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:176) Checking for location of mpiexec Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec...found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec...found Defined make macro "MPIEXECEXECUTABLE" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec" Running Executable with threads to time it out at 60 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 printenv stdout: MKLROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl LMOD_FAMILY_COMPILER_VERSION=2020.2 MANPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/man:/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/man:/share/apps/intel-2020.2/man/common:/usr/share/lmod/lmod/share/man BASHRC_READ=1 XDG_SESSION_ID=21945 _ModuleTable003_=ZyIsWyJsb2FkT3JkZXIiXT00LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTAsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09InBldHNjL21hc3Rlci1nIix9LH0sbXBhdGhBPXsiL2hvbWUvYmxhaXNlLy5tb2R1bGVmaWxlcyIsIi9ldGMvbW9kdWxlZmlsZXMiLCIvc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9iYXNlIiwiL3NoYXJlL2FwcHMvbW9kdWxlZmlsZXMvTGludXgiLCIvc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsIi9zaGFyZS9hcHBzL21vZHVsZWZpbGVzL2ludGVsMjAyMC4yIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXM6L3NoYXJlL2FwcHMvbW9kdWxl HOSTNAME=mef90.schur.math.lsu.edu __LMOD_REF_COUNT_CLASSPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/mpi.jar:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/daal.jar:1 SELINUX_ROLE_REQUESTED= I_MPI_F77=ifort IPPROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp INTEL_LICENSE_FILE=/share/apps/intel-2020.2/compilers_and_libraries/linux/licenses:/opt/intel/licenses:/home/blaise/intel/licenses __LMOD_REF_COUNT_MODULEPATH=/home/blaise/.modulefiles:1;/etc/modulefiles:1;/share/apps/modulefiles/base:1;/share/apps/modulefiles/Linux:1;/share/apps/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1;/share/apps/modulefiles/intel2020.2:1 TERM=xterm-256color SHELL=/bin/bash SLURM_MPI_TYPE=pmi2 LMOD_ROOT=/usr/share/lmod HISTSIZE=1000 PETSC_ARCH=sowing-test MODULEPATH_ROOT=/share/apps/modulefiles SSH_CLIENT=174.64.7.167 55014 22 LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 SELINUX_USE_CURRENT_RANGE= LMOD_PKG=/usr/share/lmod/lmod QTDIR=/usr/lib64/qt-3.3 LMOD_VERSION=8.2.7 QTINC=/usr/lib64/qt-3.3/include SSH_TTY=/dev/pts/5 __LMOD_REF_COUNT_LOADEDMODULES=gmake/4.3:1;intel/2020.2:1;impi/2020.2:1;petsc/master-g:1 QT_GRAPHICSSYSTEM_CHECKED=1 USER=blaise INTEL_HOME=/share/apps/intel-2020.2/compilers_and_libraries/linux LD_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:/share/apps/intel-2020.2/debugger_2020/libipt/intel64/lib:/share/apps/intel-2020.2/debugger_2020/python/intel64/lib:/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64 LMOD_sys=Linux LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45: PSTLROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl FI_PROVIDER_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib/prov CPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl/stdlib:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/include:/share/apps/intel-2020.2/compilers_and_libraries/linux/include _ModuleTable004_=ZmlsZXMvYmFzZTovc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9MaW51eDovc2hhcmUvYXBwcy9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= SSH_AUTH_SOCK=/tmp/ssh-5jDvL6G8Wz/agent.131848 __LMOD_REF_COUNT__LMFILES_=/share/apps/modulefiles/base/gmake/4.3.lua:1;/share/apps/modulefiles/base/intel/2020.2.lua:1;/share/apps/modulefiles/intel2020.2/impi/2020.2.lua:1;/share/apps/modulefiles/intel2020.2/petsc/master-g.lua:1 COLUMNS=141 LMOD_FAMILY_MPI_VERSION=2020.2 MEF90_DIR=/home/blaise/Development/mef90/mef90 NLSPATH=/share/apps/intel-2020.2/debugger_2020/gdb/intel64/share/locale/%l_%t/%N:/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/share/apps/intel-2020.2/compilers_and_libraries/linux/compiler/lib/intel64/locale/%l_%t/%N __LMOD_REF_COUNT_NLSPATH=/share/apps/intel-2020.2/debugger_2020/gdb/intel64/share/locale/%l_%t/%N:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/compiler/lib/intel64/locale/%l_%t/%N:1 _ModuleTable001_=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 HS2D=/Volumes/VTrak1/Groups/vf/HydraulicFracturing2D/ScalingTest2D/ MAIL=/var/spool/mail/blaise PATH=/share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin:/share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64:/share/apps/gmake-4.3/bin:/home/blaise/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin TBBROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb PWD=/share/apps/petsc-master SING_OPTS=--bind /var/spool --bind /etc/ssh/ssh_known_hosts _LMFILES_=/share/apps/modulefiles/base/gmake/4.3.lua:/share/apps/modulefiles/base/intel/2020.2.lua:/share/apps/modulefiles/intel2020.2/impi/2020.2.lua:/share/apps/modulefiles/intel2020.2/petsc/master-g.lua LANG=en_US.UTF-8 MODULEPATH=/home/blaise/.modulefiles:/etc/modulefiles:/share/apps/modulefiles/base:/share/apps/modulefiles/Linux:/share/apps/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/share/apps/modulefiles/intel2020.2 __LMOD_REF_COUNT_INFOPATH=/opt/rh/devtoolset-9/root/usr/share/info:1 LOADEDMODULES=gmake/4.3:intel/2020.2:impi/2020.2:petsc/master-g _ModuleTable_Sz_=4 VFGMRSDIR=/home/blaise/Development/VF_GMRS SING_IMAGE= I_MPI_F90=ifort SELINUX_LEVEL_REQUESTED= LINES=45 I_MPI_CC=icc LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod DAALROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/daal HISTCONTROL=ignoredups SHLVL=2 HOME=/home/blaise I_MPI_CXX=icpc __LMOD_REF_COUNT_PATH=/share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64:1;/share/apps/gmake-4.3/bin:1;/home/blaise/bin:2;/usr/lib64/qt-3.3/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1 __LMOD_REF_COUNT_CPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/pstl/stdlib:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/include:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/include:1 _ModuleTable002_=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 VFDIR=/home/blaise/Development/VF_Standalone I_MPI_FC=ifort BASH_EXECUTED=yes BASH_ENV=/usr/share/lmod/lmod/init/bash PYTHONPATH=:/home/blaise/Development/mef90/mef90/python LOGNAME=blaise QTLIB=/usr/lib64/qt-3.3/lib CLASSPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/mpi.jar:/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/daal.jar XDG_DATA_DIRS=/home/blaise/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share:/usr/share SSH_CONNECTION=174.64.7.167 55014 130.39.247.246 22 MPI_HOME=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64 __LMOD_REF_COUNT_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64:1 RHEL_VERSION_MAJOR=7 MODULESHOME=/usr/share/lmod/lmod PKG_CONFIG_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/bin/pkgconfig __LMOD_REF_COUNT_LD_LIBRARY_PATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib/release:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/lib:3;/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/lib:3;/share/apps/intel-2020.2/debugger_2020/libipt/intel64/lib:1;/share/apps/intel-2020.2/debugger_2020/python/intel64/lib:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/tbb/lib/intel64/gcc4.8:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/daal/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/mkl/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/ipp/lib/intel64:1;/share/apps/intel-2020.2/compilers_and_libraries/linux/lib/intel64:1 LMOD_SETTARG_FULL_SUPPORT=no LESSOPEN=||/usr/bin/lesspipe.sh %s LMOD_FAMILY_COMPILER=intel INFOPATH=/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/info XDG_RUNTIME_DIR=/run/user/1026 DISPLAY=localhost:10.0 MODULE_COMPILER=intel2020.2 __LMOD_REF_COUNT_MANPATH=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/man:3;/share/apps/intel-2020.2/documentation_2020/en/debugger/gdb-ia/man:1;/share/apps/intel-2020.2/man/common:1;/usr/share/lmod/lmod/share/man:1 LMOD_DIR=/usr/share/lmod/lmod/libexec PETSC_DIR=/share/apps/petsc-master LMOD_FAMILY_MPI=impi I_MPI_ROOT=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi BASH_FUNC_module()=() { eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh) } BASH_FUNC_ml()=() { eval $($LMOD_DIR/ml_cmd "$@") } _=/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec I_MPI_HYDRA_TREE_LEVEL=1 HYDRA_BSTRAP_PGID=0 HYDRA_BSTRAP_PROXY_ID=0 HYDRA_BSTRAP_NODE_ID=0 HYDRA_BSTRAP_UPSTREAM_FD=7 HYDRA_BSTRAP_SUBTREE_SIZE=1 HYDRA_BSTRAP_TREE_WIDTH=16 HYDRA_BSTRAP_NUM_DOWNSTREAM_PROXIES=0 HYDRA_BSTRAP_DOWNSTREAM_CONTROL= HYDRA_BSTRAP_DOWNSTREAM_STDOUT= HYDRA_BSTRAP_DOWNSTREAM_STDERR= HYDRA_BSTRAP_DOWNSTREAM_PID= HYDRA_BSTRAP_LOCALHOST=mef90.schur.math.lsu.edu HYDRA_BSTRAP_DEBUG=0 HYDRA_BSTRAP_NUM_LAUNCHES=-1 HYDRA_IP_VERSION=2 HYDRA_BSTRAP_DOWNSTREAM_HOSTS= HYDRA_BSTRAP_LAUNCHER=ssh HYDRA_COLLECTIVE_LAUNCH=1 I_MPI_INFO_NUMA_NODE_NUM=2 I_MPI_INFO_NUMA_NODE_MAP= I_MPI_HYDRA_TOPOLIB=hwloc PMI_SIZE=1 PMI_RANK=0 PMI_FD=9 MPI_LOCALNRANKS=1 MPI_LOCALRANKID=0 GFORTRAN_UNBUFFERED_PRECONNECTED=y I_MPI_INTERNAL_MEM_POLICY=default I_MPI_INFO_STATE=0 I_MPI_INFO_MODE=775 I_MPI_INFO_VEND=1 I_MPI_INFO_FLGB=-744488965 I_MPI_INFO_FLGC=2147417087 I_MPI_INFO_FLGD=-1075053569 I_MPI_INFO_FLGCEXT=2072 I_MPI_INFO_FLGDEXT=-1140849664 I_MPI_INFO_DESC=1342177280 I_MPI_INFO_BRAND=Intel(R) Xeon(R) Silver 4214 I_MPI_INFO_SERIAL= I_MPI_INFO_C_NAME=Unknown I_MPI_INFO_SIGN=329303 I_MPI_INFO_LCPU=48 I_MPI_INFO_PACK=0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1 I_MPI_INFO_CORE=0,1,2,3,4,5,8,9,10,11,12,13,0,1,2,3,4,5,8,9,10,11,12,13,0,1,2,3,4,5,8,9,10,11,12,13,0,1,2,3,4,5,8,9,10,11,12,13 I_MPI_INFO_THREAD=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1 I_MPI_INFO_CACHE1=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23 I_MPI_INFO_CACHE2=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23 I_MPI_INFO_CACHE3=0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1 I_MPI_INFO_CACHES=3 I_MPI_INFO_CACHE_SHARE=2,2,32 I_MPI_INFO_CACHE_SIZE=32768,1048576,17301504 I_MPI_INFO_NC=24 I_MPI_INFO_NP=2 I_MPI_PIN_MAPPING=1:0 0 I_MPI_PIN_INFO=x0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47 Defined make macro "MPIEXEC" to "/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec" Checking for program /usr/libexec/ApplicationFirewall/socketfilterfw...not found Checking for program /share/apps/petsc-master/lib/petsc/bin/win32fe/socketfilterfw...not found Unable to find programs ['socketfilterfw'] providing listing of the specific search path Warning accessing /usr/libexec/ApplicationFirewall gives errors: must be str, not builtin_function_or_method Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/hostname...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/hostname...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/hostname...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/hostname...not found Checking for program /share/apps/gmake-4.3/bin/hostname...not found Checking for program /home/blaise/bin/hostname...not found Checking for program /usr/lib64/qt-3.3/bin/hostname...not found Checking for program /usr/local/bin/hostname...not found Checking for program /usr/bin/hostname...found Defined make macro "HOSTNAME" to "hostname" Running Executable with threads to time it out at 60 Executing: hostname stdout: mef90.schur.math.lsu.edu Return code from hostname: 0 Hostname works, running network checks Checking for program /sbin/ping...not found Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/ping...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/ping...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/ping...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/ping...not found Checking for program /share/apps/gmake-4.3/bin/ping...not found Checking for program /home/blaise/bin/ping...not found Checking for program /usr/lib64/qt-3.3/bin/ping...not found Checking for program /usr/local/bin/ping...not found Checking for program /usr/bin/ping...found Defined make macro "PING" to "ping" Executing: uname -s stdout: Linux Running Executable with threads to time it out at 60 Executing: ping -c 2 mef90.schur.math.lsu.edu stdout: PING mef90.schur.math.lsu.edu (130.39.247.246) 56(84) bytes of data. 64 bytes from mef90.schur.math.lsu.edu (130.39.247.246): icmp_seq=1 ttl=64 time=0.060 ms 64 bytes from mef90.schur.math.lsu.edu (130.39.247.246): icmp_seq=2 ttl=64 time=0.049 ms --- mef90.schur.math.lsu.edu ping statistics --- 2 packets transmitted, 2 received, 0% packet loss, time 1003ms rtt min/avg/max/mdev = 0.049/0.054/0.060/0.009 ms Return code from ping: 0 ============================================================================================= ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Init(0,0); MPI_Finalize(); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.packages.MPI/conftest to see if it can be run Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest ============================================================================================= TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:423) Checking for MPI Datatype handles ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.packages.MPI/conftest to see if it can be run Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Defined "HAVE_MPI_LONG_DOUBLE" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.packages.MPI/conftest to see if it can be run Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Defined "HAVE_MPI_INT64_T" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } ======== Checking running linked program ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Testing executable /tmp/petsc-jcc9mra8/config.packages.MPI/conftest to see if it can be run Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiexec -n 1 /tmp/petsc-jcc9mra8/config.packages.MPI/conftest Defined "HAVE_MPI_C_DOUBLE_COMPLEX" to "1" ============================================================================================= TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:484) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.o: In function `_check_MPI_SGI_barrier': /tmp/petsc-jcc9mra8/config.libraries/conftest.c:5: undefined reference to `MPI_SGI_barrier' SGI MPI test failure ============================================================================================= TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:494) Make sure C++ can compile and link Checking for header mpi.h Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/config.libraries -g -fPIC -std=c++14 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicpc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl ============================================================================================= TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:510) Make sure fortran include [mpif.h] and library symbols are found Checking for fortran mpi_init() Checking for functions [] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.libraries -fPIC -g -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.libraries/conftest.F90 Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Checking for mpi.mod Checking for functions [] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.libraries -fPIC -g -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.libraries/conftest.F90 Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiifort -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_F90MODULE" to "1" ============================================================================================= TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:532) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); if (MPI_File_close(&fh)); ; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPIIO" to "1" ============================================================================================= TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:636) Find MPI include paths from "mpicc -show" and use with CUDAC_FLAGS ============================================================================================= TESTING: PetscArchMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:670) Checking for functions [MPI_Type_get_envelope MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan MPI_Reduce_scatter MPI_Reduce_scatter_block] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } char MPI_Reduce_scatter(); static void _check_MPI_Reduce_scatter() { MPI_Reduce_scatter(); } char MPI_Reduce_scatter_block(); static void _check_MPI_Reduce_scatter_block() { MPI_Reduce_scatter_block(); } int main() { _check_MPI_Type_get_envelope(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan(); _check_MPI_Reduce_scatter(); _check_MPI_Reduce_scatter_block();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Defined "HAVE_MPI_REDUCE_SCATTER" to "1" Defined "HAVE_MPI_REDUCE_SCATTER_BLOCK" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.o: In function `_check_MPIX_Iallreduce': /tmp/petsc-jcc9mra8/config.libraries/conftest.c:5: undefined reference to `MPIX_Iallreduce' Checking for functions [MPIX_Ibarrier] in library [] [] ===== Checking linker Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.libraries/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 /tmp/petsc-jcc9mra8/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Ibarrier(); static void _check_MPIX_Ibarrier() { MPIX_Ibarrier(); } int main() { _check_MPIX_Ibarrier();; return 0; } Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -o /tmp/petsc-jcc9mra8/config.libraries/conftest -fPIC -g /tmp/petsc-jcc9mra8/config.libraries/conftest.o -lquadmath -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: /tmp/petsc-jcc9mra8/config.libraries/conftest.o: In function `_check_MPIX_Ibarrier': /tmp/petsc-jcc9mra8/config.libraries/conftest.c:5: undefined reference to `MPIX_Ibarrier' ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" ===== Checking compiler Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -c -o /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.o -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.compilers -I/tmp/petsc-jcc9mra8/config.utilities.closure -I/tmp/petsc-jcc9mra8/config.compilersFortran -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.utilities.cacheDetails -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.functions -I/tmp/petsc-jcc9mra8/config.utilities.featureTestMacros -I/tmp/petsc-jcc9mra8/config.utilities.missing -I/tmp/petsc-jcc9mra8/PETSc.options.scalarTypes -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.libraries -I/tmp/petsc-jcc9mra8/config.packages.MPI -fPIC -g -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_NAMED;; return 0; } Defined "HAVE_MPI_COMBINER_NAMED" to "1" ============================================================================================= TESTING: checkVersion from config.packages.MPI(config/BuildSystem/config/package.py:1021) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "mpi.h" ;petscpkgver(MPI_VERSION); Executing: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/mpiicc -E -I/tmp/petsc-jcc9mra8/config.setCompilers -I/tmp/petsc-jcc9mra8/config.types -I/tmp/petsc-jcc9mra8/config.packages.valgrind -I/tmp/petsc-jcc9mra8/config.headers -I/tmp/petsc-jcc9mra8/config.packages.MPI -std=c99 -I/share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/include /tmp/petsc-jcc9mra8/config.packages.MPI/conftest.c For mpi need 2 <= 3 <= ============================================================================================= TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/package.py:953) By default we don't care about checking if the library is shared child config.packages.MPI 13.960761 ============================================================================================= TESTING: consistencyChecks from config.packages.zstd(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.zstd(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.zstd 0.001521 ============================================================================================= TESTING: consistencyChecks from config.packages.yaml(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.yaml 0.000765 ============================================================================================= TESTING: consistencyChecks from config.packages.sycl(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.sycl(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.sycl 0.000687 ============================================================================================= TESTING: consistencyChecks from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:31) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ssl(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.ssl 0.002134 ============================================================================================= TESTING: consistencyChecks from config.packages.sprng(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:957) Called if --with-packagename=0; does nothing by default child config.packages.sprng 0.000743 PETSc clone, checking for Sowing Checking for program /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin/pdflatex...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin/pdflatex...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin/pdflatex...not found Checking for program /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64/pdflatex...not found Checking for program /share/apps/gmake-4.3/bin/pdflatex...not found Checking for program /home/blaise/bin/pdflatex...not found Checking for program /usr/lib64/qt-3.3/bin/pdflatex...not found Checking for program /usr/local/bin/pdflatex...found Defined make macro "PDFLATEX" to "/usr/local/bin/pdflatex" Bfort not found. Installing sowing for FortranStubs ============================================================================================= TESTING: consistencyChecks from config.packages.sowing(config/BuildSystem/config/package.py:961) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.sowing(config/BuildSystem/config/package.py:870) ============================================================================================= TESTING: configureLibrary from config.packages.sowing(config/BuildSystem/config/package.py:895) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional sowing Looking for SOWING at git.sowing, hg.sowing or a directory starting with ['petsc-pkg-sowing'] Could not locate an existing copy of SOWING: [] Downloading sowing ============================================================================================= Trying to download git://https://bitbucket.org/petsc/pkg-sowing.git for SOWING ============================================================================================= Executing: git clone https://bitbucket.org/petsc/pkg-sowing.git /share/apps/petsc-master/sowing-test/externalpackages/git.sowing stdout: Cloning into '/share/apps/petsc-master/sowing-test/externalpackages/git.sowing'... Looking for SOWING at git.sowing, hg.sowing or a directory starting with ['petsc-pkg-sowing'] Found a copy of SOWING in git.sowing Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Executing: ['git', 'cat-file', '-e', 'v1.1.26-p1^{commit}'] Executing: ['git', 'rev-parse', 'v1.1.26-p1'] stdout: 674d5f3c1bf3ce6e1d744818915a0d723ce4dbe0 Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Executing: ['git', 'clean', '-f', '-d', '-x'] Executing: ['git', 'checkout', '-f', '674d5f3c1bf3ce6e1d744818915a0d723ce4dbe0'] SOWING was just downloaded, forcing a rebuild because cannot determine if package has changed ============================================================================================= Running configure on SOWING; this may take several minutes ============================================================================================= Executing: ./configure --prefix=/share/apps/petsc-master/sowing-test stdout: checking for ranlib... ranlib checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for ar... ar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking for virtual path format... VPATH checking for latex... /usr/local/bin/latex checking for gs... /usr/bin/gs checking for pnmcrop... no checking for pbmtoxbm... no checking for ppmtogif... no checking for pnmquant... no checking for perl... /usr/bin/perl checking how to run the C preprocessor... /lib/cpp Error running configure on SOWING: Could not execute "['./configure --prefix=/share/apps/petsc-master/sowing-test']": checking for ranlib... ranlib checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for ar... ar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking for virtual path format... VPATH checking for latex... /usr/local/bin/latex checking for gs... /usr/bin/gs checking for pnmcrop... no checking for pbmtoxbm... no checking for ppmtogif... no checking for pnmquant... no checking for perl... /usr/bin/perl checking how to run the C preprocessor... /lib/cppconfigure: error: in `/share/apps/petsc-master/sowing-test/externalpackages/git.sowing': configure: error: C preprocessor "/lib/cpp" fails sanity check See `config.log' for more details Output in config.log for SOWING: This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by sowing configure 1.1.26, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/share/apps/petsc-master/sowing-test ## --------- ## ## Platform. ## ## --------- ## hostname = mef90.schur.math.lsu.edu uname -m = x86_64 uname -r = 3.10.0-1127.18.2.el7.x86_64 uname -s = Linux uname -v = #1 SMP Sun Jul 26 15:27:06 UTC 2020 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /share/apps/petsc-master/RHEL7-intel2020.2-impi-g/bin PATH: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/bin PATH: /share/apps/intel-2020.2/compilers_and_libraries/linux/mpi/intel64/libfabric/bin PATH: /share/apps/intel-2020.2/compilers_and_libraries/linux/bin/intel64 PATH: /share/apps/gmake-4.3/bin PATH: /home/blaise/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2870: checking for ranlib configure:2886: found /usr/bin/ranlib configure:2897: result: ranlib configure:2962: checking for a BSD-compatible install configure:3030: result: /usr/bin/install -c configure:3062: checking whether install works configure:3070: result: yes configure:3085: checking for ar configure:3101: found /usr/bin/ar configure:3112: result: ar configure:3171: checking for gcc configure:3187: found /usr/bin/gcc configure:3198: result: gcc configure:3427: checking for C compiler version configure:3436: gcc --version >&5 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3447: $? = 0 configure:3436: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:3447: $? = 0 configure:3436: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:3447: $? = 4 configure:3436: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:3447: $? = 4 configure:3467: checking whether the C compiler works configure:3489: gcc conftest.c >&5 configure:3493: $? = 0 configure:3541: result: yes configure:3544: checking for C compiler default output file name configure:3546: result: a.out configure:3552: checking for suffix of executables configure:3559: gcc -o conftest conftest.c >&5 configure:3563: $? = 0 configure:3585: result: configure:3607: checking whether we are cross compiling configure:3615: gcc -o conftest conftest.c >&5 configure:3619: $? = 0 configure:3626: ./conftest configure:3630: $? = 0 configure:3645: result: no configure:3650: checking for suffix of object files configure:3672: gcc -c conftest.c >&5 configure:3676: $? = 0 configure:3697: result: o configure:3701: checking whether we are using the GNU C compiler configure:3720: gcc -c conftest.c >&5 configure:3720: $? = 0 configure:3729: result: yes configure:3738: checking whether gcc accepts -g configure:3758: gcc -c -g conftest.c >&5 configure:3758: $? = 0 configure:3799: result: yes configure:3816: checking for gcc option to accept ISO C89 configure:3879: gcc -c -g -O2 conftest.c >&5 configure:3879: $? = 0 configure:3892: result: none needed configure:3917: checking for c++ configure:3933: found /usr/bin/c++ configure:3944: result: c++ configure:4068: checking for C++ compiler version configure:4077: c++ --version >&5 c++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4088: $? = 0 configure:4077: c++ -v >&5 Using built-in specs. COLLECT_GCC=c++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) configure:4088: $? = 0 configure:4077: c++ -V >&5 c++: error: unrecognized command line option '-V' c++: fatal error: no input files compilation terminated. configure:4088: $? = 4 configure:4077: c++ -qversion >&5 c++: error: unrecognized command line option '-qversion' c++: fatal error: no input files compilation terminated. configure:4088: $? = 4 configure:4092: checking whether we are using the GNU C++ compiler configure:4111: c++ -c conftest.cpp >&5 configure:4111: $? = 0 configure:4120: result: yes configure:4129: checking whether c++ accepts -g configure:4149: c++ -c -g conftest.cpp >&5 configure:4149: $? = 0 configure:4190: result: yes configure:5787: checking for virtual path format configure:5830: result: VPATH configure:5851: checking for latex configure:5869: found /usr/local/bin/latex configure:5881: result: /usr/local/bin/latex configure:5891: checking for gs configure:5909: found /usr/bin/gs configure:5921: result: /usr/bin/gs configure:5952: checking for pnmcrop configure:5985: result: no configure:5992: checking for pbmtoxbm configure:6025: result: no configure:6032: checking for ppmtogif configure:6065: result: no configure:6072: checking for pnmquant configure:6105: result: no configure:6112: checking for perl configure:6130: found /usr/bin/perl configure:6142: result: /usr/bin/perl configure:6157: checking how to run the C preprocessor configure:6188: gcc -E conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6188: gcc -E conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6188: gcc -E -traditional-cpp conftest.c In file included from /usr/include/features.h:376:0, from /usr/include/assert.h:37, from conftest.c:14: /usr/include/sys/cdefs.h:31:3: error: #error "You need a ISO C conforming compiler to use the glibc headers" # error "You need a ISO C conforming compiler to use the glibc headers" ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6188: gcc -E -traditional-cpp conftest.c In file included from /usr/include/features.h:376:0, from /usr/include/assert.h:37, from conftest.c:14: /usr/include/sys/cdefs.h:31:3: error: #error "You need a ISO C conforming compiler to use the glibc headers" # error "You need a ISO C conforming compiler to use the glibc headers" ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6188: /lib/cpp conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6188: /lib/cpp conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6188: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6227: result: /lib/cpp configure:6247: /lib/cpp conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6247: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6247: /lib/cpp conftest.c In file included from conftest.c:11:0: /share/apps/intel-2020.2/compilers_and_libraries/linux/include/limits.h:37:54: error: missing binary operator before token "(" defined(__has_include_next) && __has_include_next() ^ configure:6247: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "sowing" | #define PACKAGE_TARNAME "sowing-1.1.26" | #define PACKAGE_VERSION "1.1.26" | #define PACKAGE_STRING "sowing 1.1.26" | #define PACKAGE_BUGREPORT "wgropp@illinois.edu" | #define PACKAGE_URL "" | #define INCLUDED_SOWINGCONF 1 | /* end confdefs.h. */ | #ifdef __STDC__ | # include | #else | # include | #endif | Syntax error configure:6277: error: in `/share/apps/petsc-master/sowing-test/externalpackages/git.sowing': configure:6279: error: C preprocessor "/lib/cpp" fails sanity check See `config.log' for more details ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_objext=o ac_cv_path_GS=/usr/bin/gs ac_cv_path_LATEX=/usr/local/bin/latex ac_cv_path_PERL=/usr/bin/perl ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_AR=ar ac_cv_prog_CPP=/lib/cpp ac_cv_prog_CXX=c++ ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes pac_cv_my_conf_dir=/share/apps/petsc-master/sowing-test/externalpackages/git.sowing pac_cv_prog_make_vpath=VPATH ## ----------------- ## ## Output variables. ## ## ----------------- ## AR='ar' CC='gcc' CFLAGS='-g -O2' CONFIGURE_OPTIONS=' '\''--prefix=/share/apps/petsc-master/sowing-test'\''' COPTIONS='' CPP='/lib/cpp' CPPFLAGS='' CXX='c++' CXXCPP='' CXXFLAGS='-g -O2' CXXOPTIONS='' DEFS='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='' EXEEXT='' FGREP='' GREP='' GS='/usr/bin/gs' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' LATEX='/usr/local/bin/latex' LDFLAGS='' LIBOBJS='' LIBS='' LTLIBOBJS='' MAKE='make' MKDIR='' OBJEXT='o' PACKAGE_BUGREPORT='wgropp@illinois.edu' PACKAGE_MAJOR_VERSION='1' PACKAGE_MINOR_VERSION='1' PACKAGE_NAME='sowing' PACKAGE_STRING='sowing 1.1.26' PACKAGE_SUBMINOR_VERSION='26' PACKAGE_TARNAME='sowing-1.1.26' PACKAGE_URL='' PACKAGE_VERSION='1.1.26' PATH_SEPARATOR=':' PBMTOXBM='' PERL='/usr/bin/perl' PNMCROP='' PNMQUANT='' PPMTOGIF='' RANLIB='ranlib' SHELL='/bin/sh' VPATH='VPATH=.:${srcdir}' ac_ct_CC='gcc' ac_ct_CXX='' bindir='${exec_prefix}/bin' build_alias='' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' expanded_bindir='' expanded_datadir='' expanded_datarootdir='' host_alias='' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' optflags='' pdfdir='${docdir}' prefix='/share/apps/petsc-master/sowing-test' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' wwwdir='${prefix}/www' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "sowing" #define PACKAGE_TARNAME "sowing-1.1.26" #define PACKAGE_VERSION "1.1.26" #define PACKAGE_STRING "sowing 1.1.26" #define PACKAGE_BUGREPORT "wgropp@illinois.edu" #define PACKAGE_URL "" #define INCLUDED_SOWINGCONF 1 configure: exit 1 **** Configure header /tmp/petsc-jcc9mra8/confdefs.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define PETSC_Alignx(a,b) #define PETSC_CLANGUAGE_C 1 #define PETSC_CXX_INLINE inline #define PETSC_CXX_RESTRICT __restrict #define PETSC_C_INLINE inline #define PETSC_C_RESTRICT __restrict #define PETSC_FORTRAN_CHARLEN_T int #define PETSC_FORTRAN_TYPE_INITIALIZE = -2 #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_BZERO 1 #define PETSC_HAVE_C99_COMPLEX 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_CXX_COMPLEX 1 #define PETSC_HAVE_CXX_DIALECT_CXX11 1 #define PETSC_HAVE_CXX_DIALECT_CXX14 1 #define PETSC_HAVE_DLCLOSE 1 #define PETSC_HAVE_DLERROR 1 #define PETSC_HAVE_DLFCN_H 1 #define PETSC_HAVE_DLOPEN 1 #define PETSC_HAVE_DLSYM 1 #define PETSC_HAVE_DRAND48 1 #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_FENV_H 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_FORK 1 #define PETSC_HAVE_FORTRAN_FLUSH 1 #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #define PETSC_HAVE_FORTRAN_TYPE_STAR 1 #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_GETDOMAINNAME 1 #define PETSC_HAVE_GETHOSTBYNAME 1 #define PETSC_HAVE_GETHOSTNAME 1 #define PETSC_HAVE_GETPAGESIZE 1 #define PETSC_HAVE_GETRUSAGE 1 #define PETSC_HAVE_GETWD 1 #define PETSC_HAVE_IMMINTRIN_H 1 #define PETSC_HAVE_INTTYPES_H 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_ISNORMAL 1 #define PETSC_HAVE_I_MPI_NUMVERSION 20190008300 #define PETSC_HAVE_LGAMMA 1 #define PETSC_HAVE_LOG2 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_MALLOC_H 1 #define PETSC_HAVE_MEMALIGN 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE_MMAP 1 #define PETSC_HAVE_MPICH_NUMVERSION 30300300 #define PETSC_HAVE_MPIIO 1 #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #define PETSC_HAVE_MPI_COMBINER_DUP 1 #define PETSC_HAVE_MPI_COMBINER_NAMED 1 #define PETSC_HAVE_MPI_C_DOUBLE_COMPLEX 1 #define PETSC_HAVE_MPI_EXSCAN 1 #define PETSC_HAVE_MPI_F90MODULE 1 #define PETSC_HAVE_MPI_FINALIZED 1 #define PETSC_HAVE_MPI_GET_ACCUMULATE 1 #define PETSC_HAVE_MPI_GET_LIBRARY_VERSION 1 #define PETSC_HAVE_MPI_IALLREDUCE 1 #define PETSC_HAVE_MPI_IBARRIER 1 #define PETSC_HAVE_MPI_INIT_THREAD 1 #define PETSC_HAVE_MPI_INT64_T 1 #define PETSC_HAVE_MPI_IN_PLACE 1 #define PETSC_HAVE_MPI_LONG_DOUBLE 1 #define PETSC_HAVE_MPI_NEIGHBORHOOD_COLLECTIVES 1 #define PETSC_HAVE_MPI_NONBLOCKING_COLLECTIVES 1 #define PETSC_HAVE_MPI_ONE_SIDED 1 #define PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY 1 #define PETSC_HAVE_MPI_REDUCE_LOCAL 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER_BLOCK 1 #define PETSC_HAVE_MPI_RGET 1 #define PETSC_HAVE_MPI_TYPE_DUP 1 #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #define PETSC_HAVE_MPI_WIN_CREATE 1 #define PETSC_HAVE_NETDB_H 1 #define PETSC_HAVE_NETINET_IN_H 1 #define PETSC_HAVE_POPEN 1 #define PETSC_HAVE_PTHREAD_H 1 #define PETSC_HAVE_PWD_H 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_READLINK 1 #define PETSC_HAVE_REALPATH 1 #define PETSC_HAVE_REAL___FLOAT128 1 #define PETSC_HAVE_RTLD_GLOBAL 1 #define PETSC_HAVE_RTLD_LAZY 1 #define PETSC_HAVE_RTLD_LOCAL 1 #define PETSC_HAVE_RTLD_NOW 1 #define PETSC_HAVE_SETJMP_H 1 #define PETSC_HAVE_SLEEP 1 #define PETSC_HAVE_SNPRINTF 1 #define PETSC_HAVE_SOCKET 1 #define PETSC_HAVE_STDINT_H 1 #define PETSC_HAVE_STRCASECMP 1 #define PETSC_HAVE_STRINGS_H 1 #define PETSC_HAVE_SYSINFO 1 #define PETSC_HAVE_SYS_PARAM_H 1 #define PETSC_HAVE_SYS_PROCFS_H 1 #define PETSC_HAVE_SYS_RESOURCE_H 1 #define PETSC_HAVE_SYS_SOCKET_H 1 #define PETSC_HAVE_SYS_SYSINFO_H 1 #define PETSC_HAVE_SYS_TIMES_H 1 #define PETSC_HAVE_SYS_TIME_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_SYS_UTSNAME_H 1 #define PETSC_HAVE_SYS_WAIT_H 1 #define PETSC_HAVE_TGAMMA 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_UNAME 1 #define PETSC_HAVE_UNISTD_H 1 #define PETSC_HAVE_USLEEP 1 #define PETSC_HAVE_VALGRIND 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_VSNPRINTF 1 #define PETSC_HAVE___INT64 1 #define PETSC_IS_COLORING_MAX USHRT_MAX #define PETSC_IS_COLORING_VALUE_TYPE short #define PETSC_IS_COLORING_VALUE_TYPE_F integer2 #define PETSC_LEVEL1_DCACHE_LINESIZE 64 #define PETSC_MAX_PATH_LEN 4096 #define PETSC_MEMALIGN 16 #define PETSC_MPIU_IS_COLORING_VALUE_TYPE MPI_UNSIGNED_SHORT #define PETSC_NEEDS_UTYPE_TYPEDEFS 1 #define PETSC_SIGNAL_CAST #define PETSC_SIZEOF_ENUM 4 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG 8 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_SIZEOF_SIZE_T 8 #define PETSC_SIZEOF_VOID_P 8 #define PETSC_USE_AVX512_KERNELS 1 #define PETSC_USE_BACKWARD_LOOP 1 #define PETSC_USE_CTABLE 1 #define PETSC_USE_DEBUG 1 #define PETSC_USE_DEBUGGER "gdb" #define PETSC_USE_INFO 1 #define PETSC_USE_LOG 1 #define PETSC_USE_PROC_FOR_SIZE 1 #define PETSC_USE_REAL_DOUBLE 1 #define PETSC_USE_SHARED_LIBRARIES 1 #define PETSC_USE_VISIBILITY_C 1 #define PETSC_USE_VISIBILITY_CXX 1 #define PETSC_USING_F2003 1 #define PETSC_USING_F90FREEFORM 1 #define PETSC_VERSION_BRANCH_GIT "master" #define PETSC_VERSION_DATE_GIT "2020-12-02 22:37:57 -0600" #define PETSC_VERSION_GIT "v3.14.1-290-g71f558e" #define PETSC__BSD_SOURCE 1 #define PETSC__DEFAULT_SOURCE 1 #define PETSC__GNU_SOURCE 1 #endif **** C specific Configure header /tmp/petsc-jcc9mra8/conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Error running configure on SOWING ******************************************************************************* File "/share/apps/petsc-master/config/configure.py", line 453, in petsc_configure framework.configure(out = sys.stdout) File "/share/apps/petsc-master/config/BuildSystem/config/framework.py", line 1273, in configure self.processChildren() File "/share/apps/petsc-master/config/BuildSystem/config/framework.py", line 1261, in processChildren self.serialEvaluation(self.childGraph) File "/share/apps/petsc-master/config/BuildSystem/config/framework.py", line 1236, in serialEvaluation child.configure() File "/share/apps/petsc-master/config/BuildSystem/config/packages/sowing.py", line 112, in configure config.package.GNUPackage.configure(self) File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 1141, in configure self.executeTest(self.configureLibrary) File "/share/apps/petsc-master/config/BuildSystem/config/base.py", line 138, in executeTest ret = test(*args,**kargs) File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 902, in configureLibrary for location, directory, lib, incl in self.generateGuesses(): File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 476, in generateGuesses d = self.checkDownload() File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 610, in checkDownload return self.getInstallDir() File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 365, in getInstallDir installDir = self.Install() File "/share/apps/petsc-master/config/BuildSystem/config/package.py", line 1664, in Install raise RuntimeError('Error running configure on ' + self.PACKAGE) ================================================================================ Finishing configure run at Thu, 03 Dec 2020 10:21:13 -0600 ================================================================================