<div dir="ltr"><div dir="ltr">On Thu, May 21, 2020 at 8:48 PM Jacob Faibussowitsch <<a href="mailto:jacob.fai@gmail.com">jacob.fai@gmail.com</a>> wrote:<br></div><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div style="overflow-wrap: break-word;">Hello All,<div><br></div><div>I ran a ./reconfigure —with-clean to update older packages/clean install however I ran into some issues. My arch (lets call it debug-arch) configuration isn’t “Standard” in that I use another arch (master-arch) to house many common packages and point all other arches to it via the “—with-package-name-dir” option. </div></div></blockquote><div><br></div><div>Are you saying it works normally because all the dependent packages are installed in the same place and it gets that place through another package?</div><div>I can believe that, It sounds like a bug in ExodusII/SECAS that you can report to Jeff.</div><div><br></div><div> Thanks,</div><div><br></div><div> Matt</div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div style="overflow-wrap: break-word;"><div>During the debug-arch configure exodusII does not finish configure with the following error message:</div><div><br></div><div>CMake Error at /usr/local/Cellar/cmake/3.17.2/share/cmake/Modules/FindPackageHandleStandardArgs.cma\<br>ke:164 (message):<br> Could NOT find PNetCDF (missing: PNetCDF_LIBRARIES PNetCDF_INCLUDE_DIRS)<br>Call Stack (most recent call first):<br> /usr/local/Cellar/cmake/3.17.2/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:445 (_FPHS\<br>A_FAILURE_MESSAGE)<br> cmake/tribits/common_tpls/find_modules/FindPNetCDF.cmake:216 (find_package_handle_standard_args)<br> cmake/tribits/common_tpls/utils/AddPackageDependency.cmake:86 (find_package)<br> cmake/tribits/common_tpls/find_modules/FindNetCDF.cmake:322 (add_package_dependency)<br> cmake/tribits/common_tpls/FindTPLNetcdf.cmake:70 (find_package)<br> cmake/tribits/core/package_arch/TribitsProcessEnabledTpl.cmake:106 (INCLUDE)<br> cmake/tribits/core/package_arch/TribitsGlobalMacros.cmake:1724 (TRIBITS_PROCESS_ENABLED_TPL)<br> cmake/tribits/core/package_arch/TribitsProjectImpl.cmake:206 (TRIBITS_PROCESS_ENABLED_TPLS)<br> cmake/tribits/core/package_arch/TribitsProject.cmake:93 (TRIBITS_PROJECT_IMPL)<br> CMakeLists.txt:46 (TRIBITS_PROJECT)</div><div><br></div><div>However checking the Cmake logs I find the following:</div><div><br></div><div>Processing enabled TPL: Pnetcdf (enabled explicitly, disable with -DTPL_ENABLE_Pnetcdf=OFF)<br>-- Pnetcdf_LIBRARY_NAMES='pnetcdf'<br>-- Searching for libs in Pnetcdf_LIBRARY_DIRS='/Users/jacobfaibussowitsch/NoSync/petscpackages/lib'<br>-- Searching for a lib in the set "pnetcdf":<br>-- Searching for lib 'pnetcdf' ...<br>-- Found lib '/Users/jacobfaibussowitsch/NoSync/petscpackages/lib/libpnetcdf.dylib'<br>-- TPL_Pnetcdf_LIBRARIES='/Users/jacobfaibussowitsch/NoSync/petscpackages/lib/libpnetcdf.dylib'<br>-- Searching for headers in Pnetcdf_INCLUDE_DIRS='/Users/jacobfaibussowitsch/NoSync/petscpackages/i\<br>nclude'<br>-- Searching for a header file in the set "pnetcdf.h":<br>-- Searching for header 'pnetcdf.h' ...<br>-- Found header '/Users/jacobfaibussowitsch/NoSync/petscpackages/include/pnetcdf.h'<br>-- Found TPL 'Pnetcdf' include dirs '/Users/jacobfaibussowitsch/NoSync/petscpackages/include'<br>-- TPL_Pnetcdf_INCLUDE_DIRS='/Users/jacobfaibussowitsch/NoSync/petscpackages/include'<br>Processing enabled TPL: Netcdf (enabled explicitly, disable with -DTPL_ENABLE_Netcdf=OFF)</div><div><br></div><div>Indicating that it does indeed find pnetcdf… but saves its location to “TPL_Pnetcdf_INCLUDE_DIRS” instead of the “<font color="#000000"><span>PNetCDF_INCLUDE_DIRS” which it later searches. </span></font>I have included both reconfigure scripts, and latest configure.log.</div><div><br></div><div><div>
<div dir="auto" style="color:rgb(0,0,0);letter-spacing:normal;text-align:start;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;text-decoration:none"><div>Best regards,<br><br>Jacob Faibussowitsch<br>(Jacob Fai - booss - oh - vitch)<br>Cell: (312) 694-3391</div></div>
</div><div></div></div></div><div style="overflow-wrap: break-word;"><div><div></div></div></div><div style="overflow-wrap: break-word;"><div><div></div></div></div><div style="overflow-wrap: break-word;"><div><div></div></div></div></blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div><div><br></div><div><a href="http://www.cse.buffalo.edu/~knepley/" target="_blank">https://www.cse.buffalo.edu/~knepley/</a><br></div></div></div></div></div></div></div></div>