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<font face="Droid Serif">Thanks Barry and Satish for your answers.<br>
<br>
I installed the correct version of hypre. Also, I changed the
paths to short dos paths as Satish suggested. Now PETSc compiles
without problems and the tests are ok.<br>
<br>
Regarding Satish notes:<br>
<br>
I had to include -LIBS because otherwise the configure script
stops while testing blas-lapack with the following error:<br>
<br>
===============================================================================<br>
TESTING: checkLib from
config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:114)*******************************************************************************<br>
UNABLE to CONFIGURE with GIVEN OPTIONS (see
configure.log for details):<br>
-------------------------------------------------------------------------------<br>
You set a value for --with-blaslapack-lib=<lib>, but
['-L/cygdrive/c/PROGRA~2/INTELS~1/COMPIL~1/windows/mkl/lib/intel64',
'mkl_intel_lp64.lib', 'mkl_core.lib', 'mkl_intel_thread.lib']
cannot be used<br>
*******************************************************************************<br>
<br>
Do I need to turn on the MKL sparse functionality? what is the
difference between MKL_SPARSE, MKL_SPARSE_OPTIMIZE and
MKL_SPARSE_SP2M in the configure options?<br>
<br>
Why is better to use sequential MKL? Is it possible to use a
hybrid MPI - OpenMP approach? for example MPI for internode
communication and OpenMP for intranode computation? In that case
would it be good to use threaded MKL + MPI?<br>
<br>
Thanks,<br>
<br>
Hector<br>
<br>
<br>
<br>
</font>
<div class="moz-cite-prefix">On 07/05/2018 08:54 PM, Satish Balay
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:alpine.LFD.2.21.1807052046000.29624@asterix">
<pre wrap="">A few additional notes:
On Thu, 5 Jul 2018, Satish Balay wrote:
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<pre wrap="">Using configure Options: --prefix=/cygdrive/c/installed/petsc_git-intel-debug/ --PETSC_DIR=/cygdrive/c/sources/petsc --PETSC_ARCH=windows-intel-debug --with-cc="win32fe cl" --with-fc="win32fe ifort" --with-mpi-include="[/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mpi/intel64/include]" --with-mpi-lib="[/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mpi/intel64/lib/release_mt/impi.lib]"
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<pre wrap=""> --with-openmp=1
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I don't think this option does anything [on windows]
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<pre wrap="">--with-parmetis-lib=/cygdrive/c/installed/parmetis/lib/parmetis.lib --with-parmetis-include=/cygdrive/c/installed/parmetis/include --with-metis-lib=/cygdrive/c/installed/parmetis/lib/metis.lib --with-metis-include=/cygdrive/c/installed/parmetis/include --with-zoltan-include=/cygdrive/c/installed/zoltan/include --with-zoltan-lib=/cygdrive/c/installed/zoltan/lib/zoltan.lib --with-hypre-include=/cygdrive/c/installed/hypre/include --with-hypre-lib=/cygdrive/c/installed/hypre/lib/HYPRE.lib --with-blaslapack-lib="[/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_intel_lp64.lib,/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_intel_thread.lib]"
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<pre wrap=""> --with-scalapack-include="/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/include" --with-scalapack-lib="[/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_scalapack_lp64.lib,/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_blacs_intelmpi_lp64.lib]"
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PETSc does not use scalapack or blacs. They are dependencies for MUMPS [which petsc has an interface to]
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<pre wrap="">--with-shared-libraries=0
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<pre wrap="">-LIBS=""/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_intel_lp64.lib" "/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_intel_thread.lib" "/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64//mkl_core.lib" "/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_scalapack_lp64.lib" "/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018/windows/mkl/lib/intel64/mkl_blacs_intelmpi_lp64.lib" libiomp5md.lib"
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I'm not sure why you are having to respecify MKL via LIBS option.
Also with PETSc MPI usage - its best to use sequential MKL - and not threaded MKL - for eg:
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<pre wrap="">--with-blaslapack-lib='-L/cygdrive/c/PROGRA~2/INTELS~1/COMPIL~2/windows/mkl/lib/intel64 mkl_intel_lp64_dll.lib mkl_sequential_dll.lib mkl_core_dll.lib'
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<pre wrap="">mhypre.c
C:\sources\petsc\src\mat\impls\hypre\mhypre.c(1453): warning C4002: too many actual parameters for macro 'hypre_TFree'
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You can switch to the compatible version of hypre - or fix revert the code change..
<a class="moz-txt-link-freetext" href="https://bitbucket.org/petsc/petsc/commits/e6de09342ce9c4562cc062ff2c1bac4bd956bda0">https://bitbucket.org/petsc/petsc/commits/e6de09342ce9c4562cc062ff2c1bac4bd956bda0</a>
Satish
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