<div dir="ltr"><div>It builds and runs but looks like PETSc does not register aijmkl matrices.</div><div><br></div><div><br></div><div><div>---</div><div>> [0]PETSC ERROR: --------------------- Error Message --------------------------------------------------------------</div><div>> [0]PETSC ERROR: Unknown type. Check for miss-spelling or missing package: <a href="http://www.mcs.anl.gov/petsc/documentation/installation.html#external">http://www.mcs.anl.gov/petsc/documentation/installation.html#external</a></div><div>> [0]PETSC ERROR: Unknown Mat type given: aijmkl</div><div>> [0]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html">http://www.mcs.anl.gov/petsc/documentation/faq.html</a> for trouble shooting.</div><div>> [0]PETSC ERROR: Petsc Release Version 3.9.2, unknown</div><div>> [0]PETSC ERROR: /global/u2/m/madams/petsc_install/petsc/src/snes/examples/tutorials/./ex19 on a  named nid02516 by madams Sat Jun 30 12:48:10 2018</div><div>> [0]PETSC ERROR: Configure options --known-level1-dcache-size=32768 --known-level1-dcache-linesize=64 --known-level1-dcache-assoc=8 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-memcmp-ok=1 --known-sizeof-MPI_Comm=4 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --known-mpi-int64_t=1 --known-mpi-c-double-complex=1 --known-has-attribute-aligned=1 --with-cc=cc --with-cxx=CC --with-fc=ftn COPTFLAGS="  -g -O0 -hcpu=mic-knl -qopenmp-simd" CXXOPTFLAGS="-g -O0 -hcpu=mic-knl -qopenmp-simd" FOPTFLAGS="  -g -O0 -hcpu=mic-knl -qopenmp-simd" --download-metis=1 --with-hypre-dir=/global/homes/m/madams/tmp/hypre-2.14.0 --download-parmetis=1 --with-blaslapack-lib=/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64/libmkl_intel_thread.a --with-debugging=1 --with-mpiexec=srun --with-batch=1 --known-mpi-shared-libraries=1 --known-64-bit-blas-indices=0 --with-64-bit-indices=1 PETSC_ARCH=arch-cori-knl-dbg64-intel-omp --with-openmp=1 --download-p4est=0 --with-x=0 --prefix=/global/homes/m/madams/petsc_install/petsc-cori-knl-dbg64-intel-omp PETSC_DIR=/global/homes/m/madams/petsc_install/petsc</div><div>> [0]PETSC ERROR: #1 MatSetType() line 61 in /global/u2/m/madams/petsc_install/petsc/src/mat/interface/matreg.c</div><div>> [0]PETSC ERROR: #2 MatSetFromOptions() line 229 in /global/u2/m/madams/petsc_install/petsc/src/mat/utils/gcreate.c</div><div>> [0]PETSC ERROR: #3 DMCreateMatrix_DA() line 793 in /global/u2/m/madams/petsc_install/petsc/src/dm/impls/da/fdda.c</div><div>> [0]PETSC ERROR: #4 DMCreateMatrix() line 1262 in /global/u2/m/madams/petsc_install/petsc/src/dm/interface/dm.c</div><div>> [0]PETSC ERROR: #5 SNESSetUpMatrices() line 646 in /global/u2/m/madams/petsc_install/petsc/src/snes/interface/snes.c</div><div>> [0]PETSC ERROR: #6 SNESSetUp_NEWTONLS() line 296 in /global/u2/m/madams/petsc_install/petsc/src/snes/impls/ls/ls.c</div><div>> [0]PETSC ERROR: #7 SNESSetUp() line 2908 in /global/u2/m/madams/petsc_install/petsc/src/snes/interface/snes.c</div><div>> [0]PETSC ERROR: #8 SNESSolve() line 4300 in /global/u2/m/madams/petsc_install/petsc/src/snes/interface/snes.c</div><div>> [0]PETSC ERROR: #9 main() line 161 in /global/homes/m/madams/petsc_install/petsc/src/snes/examples/tutorials/ex19.c</div><div>> [0]PETSC ERROR: PETSc Option Table entries:</div><div>> [0]PETSC ERROR: -da_refine 3</div><div>> [0]PETSC ERROR: -ksp_monitor</div><div>> [0]PETSC ERROR: -mat_type aijmkl</div><div>> [0]PETSC ERROR: -options_left</div><div>> [0]PETSC ERROR: -pc_type gamg</div><div>> [0]PETSC ERROR: -snes_monitor_short</div><div>> [0]PETSC ERROR: -snes_view</div><div>> [0]PETSC ERROR: ----------------End of Error Message -------se</div></div></div><br><div class="gmail_quote"><div dir="ltr">On Sat, Jun 30, 2018 at 3:08 PM Mark Adams <<a href="mailto:mfadams@lbl.gov">mfadams@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">OK, that got further.</div><br><div class="gmail_quote"><div dir="ltr">On Sat, Jun 30, 2018 at 3:03 PM Mark Adams <<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Like this?<div><br></div><div><div>    '--with-blaslapack-lib=/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64/libmkl_intel_thread.a',</div></div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr">On Sat, Jun 30, 2018 at 3:00 PM Mark Adams <<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><br></div><div>Specify either "--with-blaslapack-dir" or "--with-blaslapack-lib --with-blaslapack-include". But not both!</div></div></blockquote><div><br></div><div>Get rid of the dir option, and give the full path to the library.</div><div><br></div></div></div></blockquote><div><br></div><div>What is the syntax for giving the full path? </div></div></div>
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