<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><br class=""><div><blockquote type="cite" class=""><div class="">On Nov 1, 2016, at 1:22 PM, Matthew Knepley <<a href="mailto:knepley@gmail.com" class="">knepley@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class=""><div class="gmail_extra"><div class="gmail_quote">On Tue, Nov 1, 2016 at 7:19 AM, Garth N. Wells <span dir="ltr" class=""><<a href="mailto:gnw20@cam.ac.uk" target="_blank" class="">gnw20@cam.ac.uk</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">I get a PaStiX build failure with '--download-pastix':<br class="">
<br class="">
In file included from sopalin/src/murge.c:364:0,<br class="">
from sopalin/src/zmurge.c:54:<br class="">
sopalin/src/variable_csc.c: In function ‘vcsc_add_node’:<br class="">
sopalin/src/variable_csc.c:<wbr class="">138:13: error: non-floating-point argument<br class="">
in call to function ‘__builtin_isnan’<br class="">
if (isnan(vcsc->values[COL-1][i*<wbr class="">dof2 + ii])) {<br class="">
^~<br class="">
sopalin/src/variable_csc.c: In function ‘vcsc_add’:<br class="">
sopalin/src/variable_csc.c:<wbr class="">255:11: error: non-floating-point argument<br class="">
in call to function ‘__builtin_isnan’<br class="">
if (isnan(vcsc->values[COL_NODE][<wbr class="">idx])) {<br class="">
^~<br class="">
sopalin/src/variable_csc.c: In function ‘vcsc_to_cscd’:<br class="">
sopalin/src/variable_csc.c:<wbr class="">663:15: error: non-floating-point argument<br class="">
in call to function ‘__builtin_isnan’<br class="">
if (!isnan(vcsc->values[MYCOL-1][<wbr class="">dof2*iter2+iterdof])) {<br class="">
^~<br class="">
make: *** [sopalin/obj/i686_pc_linux/<wbr class="">zmurge.o] Error 1<br class="">
******************************<wbr class="">******************************<wbr class="">*******************<br class="">
<br class="">
From the PaStIX changelog, it looks like it's fixed in PaStiX 5.2.3.<br class="">
But, despite bumping the version in PaStiX.py cleaning everything out,<br class="">
PETSc kept downloading 5.2.2.20. I have no idea where the build system<br class="">
is getting 5.2.2.20 from.<br class=""></blockquote><div class=""><br class=""></div><div class="">From this line</div><div class=""><br class=""></div><div class=""> <a href="https://bitbucket.org/petsc/petsc/src/a2b5a0438a710504fe0fdd39a793ddf656611e6a/config/BuildSystem/config/packages/PaStiX.py?at=master&fileviewer=file-view-default#PaStiX.py-6" class="">https://bitbucket.org/petsc/petsc/src/a2b5a0438a710504fe0fdd39a793ddf656611e6a/config/BuildSystem/config/packages/PaStiX.py?at=master&fileviewer=file-view-default#PaStiX.py-6</a></div><div class=""><br class=""></div><div class="">You can change that to download the version you want. If it works, let us know and I will make a patch.</div></div></div></div></div></blockquote><div><br class=""></div><div>It does work (I’ve had this problem for months and I switched to 5.2.3 last week).</div><div><br class=""></div><div>Thanks,</div><div>Pierre</div><br class=""><blockquote type="cite" class=""><div class=""><div dir="ltr" class=""><div class="gmail_extra"><div class="gmail_quote"><div class=""> Thanks,</div><div class=""><br class=""></div><div class=""> Matt</div><div class=""> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
Also, the doc at<br class="">
<br class="">
<a href="http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MATSOLVERPASTIX.html" rel="noreferrer" target="_blank" class="">http://www.mcs.anl.gov/petsc/<wbr class="">petsc-current/docs/<wbr class="">manualpages/Mat/<wbr class="">MATSOLVERPASTIX.html</a><br class="">
<br class="">
seems inconsistent with config/BuildSystem/config/<wbr class="">packages/PaStiX.py -<br class="">
PaStiX doesn't depend on ParMETIS and METIS.<br class="">
<span class="gmail-HOEnZb"><font color="#888888" class=""><br class="">
Garth<br class="">
</font></span></blockquote></div><br class=""><br clear="all" class=""><div class=""><br class=""></div>-- <br class=""><div class="gmail_signature">What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br class="">-- Norbert Wiener</div>
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