Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Wed Nov 5 10:29:43 2014 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=4 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --known-mpi-int64_t=1 --known-mpi-c-double-complex=1 --download-parmetis --download-metis --download-superlu_dist --download-superlu --with-batch=1 --CFLAGS="-mmic -mkl -fp-model precise" --CXXFLAGS="-mmic -mkl -fp-model precise" --FFLAGS="-mmic -mkl -fp-model precise" --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --known-mpi-shared-libraries=1 --with-shared-libraries=0 --with-x=0 --with-debugging=0 PETSC_ARCH=arch-knc-opt PETSC_DIR=/global/homes/m/madams/petsc Working directory: /chos/global/u2/m/madams/petsc Machine platform: ('Linux', 'bint01', '2.6.32-431.20.3.el6.nersc.x86_64', '#1 SMP Fri Jun 20 02:34:38 PDT 2014', 'x86_64', 'x86_64') Python version: 2.6.6 (r266:84292, Nov 21 2013, 12:39:37) [GCC 4.4.7 20120313 (Red Hat 4.4.7-3)] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/framework.py:823) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:823) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/gdb...not found Checking for program /global/homes/m/madams/git-fat/gdb...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/gdb...not found Checking for program /usr/common/usg/bin/gdb...not found Checking for program /usr/common/mss/bin/gdb...not found Checking for program /usr/common/nsg/bin/gdb...not found Checking for program /usr/lib64/qt-3.3/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/gdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/gdb...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/gdb...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/gdb...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/gdb...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/gdb...not found Checking for program /usr/syscom/nsg/sbin/gdb...not found Checking for program /usr/syscom/nsg/bin/gdb...not found Checking for program /usr/share/Modules/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/dbx...not found Checking for program /global/homes/m/madams/git-fat/dbx...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/dbx...not found Checking for program /usr/common/usg/bin/dbx...not found Checking for program /usr/common/mss/bin/dbx...not found Checking for program /usr/common/nsg/bin/dbx...not found Checking for program /usr/lib64/qt-3.3/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/dbx...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/dbx...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/dbx...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/dbx...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/dbx...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/dbx...not found Checking for program /usr/syscom/nsg/sbin/dbx...not found Checking for program /usr/syscom/nsg/bin/dbx...not found Checking for program /usr/share/Modules/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /usr/local/sbin/dbx...not found Checking for program /usr/sbin/dbx...not found Checking for program /sbin/dbx...not found Checking for program /global/homes/m/madams/dbx...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/xdb...not found Checking for program /global/homes/m/madams/git-fat/xdb...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/xdb...not found Checking for program /usr/common/usg/bin/xdb...not found Checking for program /usr/common/mss/bin/xdb...not found Checking for program /usr/common/nsg/bin/xdb...not found Checking for program /usr/lib64/qt-3.3/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/xdb...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/xdb...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/xdb...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/xdb...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/xdb...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/xdb...not found Checking for program /usr/syscom/nsg/sbin/xdb...not found Checking for program /usr/syscom/nsg/bin/xdb...not found Checking for program /usr/share/Modules/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /usr/local/sbin/xdb...not found Checking for program /usr/sbin/xdb...not found Checking for program /sbin/xdb...not found Checking for program /global/homes/m/madams/xdb...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/dsymutil...not found Checking for program /global/homes/m/madams/git-fat/dsymutil...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/dsymutil...not found Checking for program /usr/common/usg/bin/dsymutil...not found Checking for program /usr/common/mss/bin/dsymutil...not found Checking for program /usr/common/nsg/bin/dsymutil...not found Checking for program /usr/lib64/qt-3.3/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/dsymutil...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/dsymutil...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/dsymutil...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/dsymutil...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/dsymutil...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/dsymutil...not found Checking for program /usr/syscom/nsg/sbin/dsymutil...not found Checking for program /usr/syscom/nsg/bin/dsymutil...not found Checking for program /usr/share/Modules/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /usr/local/sbin/dsymutil...not found Checking for program /usr/sbin/dsymutil...not found Checking for program /sbin/dsymutil...not found Checking for program /global/homes/m/madams/dsymutil...not found Defined make macro "DSYMUTIL" to "true" Defined "USE_GDB_DEBUGGER" to "1" ================================================================================ TEST configureGit from config.sourceControl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/git...not found Checking for program /global/homes/m/madams/git-fat/git...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/git...not found Checking for program /usr/common/usg/bin/git...not found Checking for program /usr/common/mss/bin/git...not found Checking for program /usr/common/nsg/bin/git...not found Checking for program /usr/lib64/qt-3.3/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/git...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/git...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/git...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/git...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/git...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/git...not found Checking for program /usr/syscom/nsg/sbin/git...not found Checking for program /usr/syscom/nsg/bin/git...not found Checking for program /usr/share/Modules/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Executing: git --version stdout: git version 1.7.1 ================================================================================ TEST configureMercurial from config.sourceControl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/hg...not found Checking for program /global/homes/m/madams/git-fat/hg...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/hg...not found Checking for program /usr/common/usg/bin/hg...not found Checking for program /usr/common/mss/bin/hg...not found Checking for program /usr/common/nsg/bin/hg...not found Checking for program /usr/lib64/qt-3.3/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/hg...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/hg...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/hg...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/hg...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/hg...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/hg...not found Checking for program /usr/syscom/nsg/sbin/hg...not found Checking for program /usr/syscom/nsg/bin/hg...not found Checking for program /usr/share/Modules/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /usr/local/sbin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /sbin/hg...not found Checking for program /global/homes/m/madams/hg...not found ================================================================================ TEST configureCVS from config.sourceControl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/sourceControl.py:46) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:46) Find the CVS executable Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/cvs...not found Checking for program /global/homes/m/madams/git-fat/cvs...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/cvs...not found Checking for program /usr/common/usg/bin/cvs...not found Checking for program /usr/common/mss/bin/cvs...not found Checking for program /usr/common/nsg/bin/cvs...not found Checking for program /usr/lib64/qt-3.3/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/cvs...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/cvs...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/cvs...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/cvs...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/cvs...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/cvs...not found Checking for program /usr/syscom/nsg/sbin/cvs...not found Checking for program /usr/syscom/nsg/bin/cvs...not found Checking for program /usr/share/Modules/bin/cvs...not found Checking for program /usr/local/bin/cvs...not found Checking for program /bin/cvs...not found Checking for program /usr/bin/cvs...found Defined make macro "CVS" to "cvs" Executing: cvs --version stdout: Concurrent Versions System (CVS) 1.11.23 (client/server) Copyright (C) 2006 Free Software Foundation, Inc. Senior active maintainers include Larry Jones, Derek R. Price, and Mark D. Baushke. Please see the AUTHORS and README files from the CVS distribution kit for a complete list of contributors and copyrights. CVS may be copied only under the terms of the GNU General Public License, a copy of which can be found with the CVS distribution kit. Specify the --help option for further information about CVS ================================================================================ TEST configureSubversion from config.sourceControl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/sourceControl.py:55) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:55) Find the Subversion executable Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/svn...not found Checking for program /global/homes/m/madams/git-fat/svn...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/svn...not found Checking for program /usr/common/usg/bin/svn...not found Checking for program /usr/common/mss/bin/svn...not found Checking for program /usr/common/nsg/bin/svn...not found Checking for program /usr/lib64/qt-3.3/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/svn...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/svn...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/svn...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/svn...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/svn...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/svn...not found Checking for program /usr/syscom/nsg/sbin/svn...not found Checking for program /usr/syscom/nsg/bin/svn...not found Checking for program /usr/share/Modules/bin/svn...not found Checking for program /usr/local/bin/svn...not found Checking for program /bin/svn...not found Checking for program /usr/bin/svn...found Defined make macro "SVN" to "svn" Executing: svn --version -q stdout: 1.6.11 ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/languages.py:27) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/petscdir.py:23) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 0 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 5 #define PETSC_VERSION_SUBMINOR 0 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/global/homes/m/madams/petsc" ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscclone(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/petscclone.py:15) TESTING: configureInstallationMethod from PETSc.utilities.petscclone(config/PETSc/utilities/petscclone.py:15) bin/maint exists. This appears to be a repository clone Defined "VERSION_GIT" to ""v3.5-25-g0ace994"" Defined "VERSION_DATE_GIT" to ""2014-07-07 14:50:15 +0200"" ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be ================================================================================ TEST configureETags from PETSc.utilities.Etags(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise Found etags file ================================================================================ TEST configureArchitecture from PETSc.utilities.arch(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/arch.py:25) TESTING: configureArchitecture from PETSc.utilities.arch(config/PETSc/utilities/arch.py:25) Checks PETSC_ARCH and sets if not set =============================================================================== Warning: PETSC_ARCH from environment does not match command-line or name of script. Warning: Using from command-line or name of script: arch-knc-opt, ignoring environment: arch-knc-dbg64 =============================================================================== Defined "ARCH" to ""arch-knc-opt"" ================================================================================ TEST setInstallDir from PETSc.utilities.installDir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/installDir.py:27) TESTING: setInstallDir from PETSc.utilities.installDir(config/PETSc/utilities/installDir.py:27) setup installDir to PETSC_DIR/PETSC_ARCH ================================================================================ TEST saveReconfigure from PETSc.utilities.installDir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/installDir.py:53) TESTING: saveReconfigure from PETSc.utilities.installDir(config/PETSc/utilities/installDir.py:53) ================================================================================ TEST cleanInstallDir from PETSc.utilities.installDir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/installDir.py:46) TESTING: cleanInstallDir from PETSc.utilities.installDir(config/PETSc/utilities/installDir.py:46) ================================================================================ TEST configureInstallDir from PETSc.utilities.installDir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/installDir.py:31) TESTING: configureInstallDir from PETSc.utilities.installDir(config/PETSc/utilities/installDir.py:31) Makes installDir subdirectories if it does not exist Changed persistence directory to /chos/global/u2/m/madams/petsc/arch-knc-opt/conf ================================================================================ TEST restoreReconfigure from PETSc.utilities.installDir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/installDir.py:66) TESTING: restoreReconfigure from PETSc.utilities.installDir(config/PETSc/utilities/installDir.py:66) ================================================================================ TEST setExternalPackagesDir from PETSc.utilities.externalpackagesdir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.utilities.externalpackagesdir(config/PETSc/utilities/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.utilities.externalpackagesdir(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.utilities.externalpackagesdir(config/PETSc/utilities/externalpackagesdir.py:22) ================================================================================ TEST printEnvVariables from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1515) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1515) **** printenv **** _=../reconfigure-arch-knc-opt.py I_MPI_ROOT=/global/babbage/nsg/opt/intel/impi/4.1.3.048 PBS_BIN=/usr/syscom/nsg/opt/torque/4.2.6/bin LOADEDMODULES=modules:nsg/1.2.0:torque/4.2.6:moab/7.2.6:intel/15.0.0:impi/4.1.3:usg-default-modules/1.1:cmake/3.0.1:totalview/8T.12.0-1 INTEL_LICENSE_FILE=/global/common/shared/usg/licenses/intel/license.dat TVDSVRLAUNCHCMD=ssh -i ~/.ssh/batchmode -n -o StrictHostKeyChecking=no -o UserKnownHostsFile=/dev/null LESSOPEN=|/usr/bin/lesspipe.sh %s CHOMBO_DIR=/global/homes/m/madams/Chombo NSG_HOME=/usr/syscom/nsg CH_TIMER=FALSE SSH_CLIENT=128.55.72.32 39984 22 CPATH=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include/fftw:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/include LD_LIBRARY_PATH=/usr/common/usg/cmake/3.0.1/lib/:/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/lib:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/lib:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/intel64/gcc4.4:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/ipp/lib/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/intel64:/opt/intel/mic/coi/host-linux-release/lib:/opt/intel/mic/myo/lib:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/lib/intel64:/global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/lib:/usr/syscom/nsg/opt/moab/7.2.6/lib:/usr/syscom/nsg/opt/torque/4.2.6/lib:/usr/syscom/nsg/lib USER=madams PATH=/usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin:/global/homes/m/madams/git-fat:/usr/common/usg/cmake/3.0.1/bin:/usr/common/usg/bin:/usr/common/mss/bin:/usr/common/nsg/bin:/usr/lib64/qt-3.3/bin:/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin:/global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic:/usr/syscom/nsg/opt/moab/7.2.6/sbin:/usr/syscom/nsg/opt/moab/7.2.6/bin:/usr/syscom/nsg/opt/torque/4.2.6/sbin:/usr/syscom/nsg/opt/torque/4.2.6/bin:/usr/syscom/nsg/sbin:/usr/syscom/nsg/bin:/usr/share/Modules/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin QTDIR=/usr/lib64/qt-3.3 CH_OUTPUT_INTERVAL=100000 MIC_LD_LIBRARY_PATH=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic:/opt/intel/mic/coi/device-linux-release/lib:/opt/intel/mic/myo/lib PAT_RT_HWPC=1 QTLIB=/usr/lib64/qt-3.3/lib TERM=xterm SHELL=/bin/bash LIBRARY_PATH=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/intel64/gcc4.4:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/ipp/lib/intel64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/ipp/lib:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/intel64 INCLUDE=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include/mic/ilp64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include/mic/lp64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include/intel64/ilp64:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/include/intel64/lp64 QTINC=/usr/lib64/qt-3.3/include FORT_BUFFERED=yes G_BROKEN_FILENAMES=1 PWD=/global/homes/m/madams/petsc HISTSIZE=1000 I_MPI_MIC=enable PETSC_DIR=/global/homes/m/madams/petsc_private GSCRATCH2=/global/scratch2/sd/madams MANPATH=/usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/man:/usr/common/usg/cmake/3.0.1/share:/usr/common/usg/man:/usr/common/mss/man:/usr/common/nsg/man:/global/babbage/nsg/opt/intel/impi/4.1.3.048/man:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/man/en_US:/usr/syscom/nsg/opt/moab/7.2.6/share/man:/usr/syscom/nsg/opt/torque/4.2.6/share/man:/usr/syscom/nsg/man:/usr/share/Modules/man:/usr/share/man/overrides:/usr/share/man:/usr/man/overrides:/usr/man MPIEXEC=aprun LOGNAME=madams SVN_EDITOR=vi HOME=/global/homes/m/madams MODULESHOME=/usr/share/Modules MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles:/usr/common/usg/Modules/modulefiles:/usr/syscom/nsg/modulefiles:/usr/syscom/nsg/opt/modulefiles GSCRATCH=/global/scratch2/sd/madams ARGS=-nxpe 4 -nype 2 -nzpe 2 -dom_x_hi 2.0 -nsmoothsfmg 1 MPICH_GNI_MDD_SHARING=disabled SHLVL=1 MOAB_BIN=/usr/syscom/nsg/opt/moab/7.2.6/bin MIC_LIBRARY_PATH=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic MOD_NAME=mod NSS_STRICT_NOFORK=DISABLED BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*` } BASH_ENV=/global/homes/m/madams/.bashrc NLSPATH=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/lib/intel64/locale/%l_%t/%N:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/intel64/locale/%l_%t/%N:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/ipp/lib/intel64/locale/%l_%t/%N:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/ipp/lib/locale/en_US/%N:/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/intel64/locale/%l_%t/%N TMPDIR=/global/scratch2/sd/madams IPM_REPORT=full KDEDIRS=/usr SSH_CONNECTION=128.55.72.32 39984 128.55.69.17 22 NERSC_HOST=babbage PBS_HOME=/usr/syscom/nsg/opt/torque/server MKLROOT=/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl SSH_TTY=/dev/pts/2 PE_PRODUCT_LIST=TOTALVIEW HOSTNAME=bint01 MAIL=/var/spool/mail/madams MOABHOMEDIR=/usr/syscom/nsg/opt/moab/spool HISTCONTROL=ignoredups I_MPI_MPIRUN_CLEANUP=1 PETSC_ARCH=arch-knc-dbg64 CVS_RSH=ssh SCRATCH=/global/scratch2/sd/madams MALLOC_CHECK_=0 _LMFILES_=/usr/share/Modules/modulefiles/modules:/usr/syscom/nsg/modulefiles/nsg/1.2.0:/usr/syscom/nsg/opt/modulefiles/torque/4.2.6:/usr/syscom/nsg/opt/modulefiles/moab/7.2.6:/usr/common/usg/Modules/modulefiles/intel/15.0.0:/usr/common/usg/Modules/modulefiles/impi/4.1.3:/usr/common/usg/Modules/modulefiles/usg-default-modules/1.1:/usr/common/usg/Modules/modulefiles/cmake/3.0.1:/usr/common/usg/Modules/modulefiles/totalview/8T.12.0-1 OLDPWD=/global/homes/m/madams LM_LICENSE_FILE=/usr/common/usg/totalview/toolworks/flexlm-10.8.0-3/license.dat ================================================================================ TEST resetEnvCompilers from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1522) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1522) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1487) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1487) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1506) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1506) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:398) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:398) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:408) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:408) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -mmic -mkl -fp-model precise Initialized CFLAGS to -mmic -mkl -fp-model precise Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -mmic -mkl -fp-model precise Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to -mmic -mkl -fp-model precise Initialized FFLAGS to -mmic -mkl -fp-model precise Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:524) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:524) Locate a functional C compiler Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiicc...not found Checking for program /global/homes/m/madams/git-fat/mpiicc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiicc...not found Checking for program /usr/common/usg/bin/mpiicc...not found Checking for program /usr/common/mss/bin/mpiicc...not found Checking for program /usr/common/nsg/bin/mpiicc...not found Checking for program /usr/lib64/qt-3.3/bin/mpiicc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiicc...found Defined make macro "CC" to "mpiicc" Pushing language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:559) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:559) Locate a functional C preprocessor Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiicc...not found Checking for program /global/homes/m/madams/git-fat/mpiicc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiicc...not found Checking for program /usr/common/usg/bin/mpiicc...not found Checking for program /usr/common/mss/bin/mpiicc...not found Checking for program /usr/common/nsg/bin/mpiicc...not found Checking for program /usr/lib64/qt-3.3/bin/mpiicc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiicc...found Defined make macro "CPP" to "mpiicc -E" Pushing language C Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 26 "/usr/include/stdlib.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 34 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitflags.h" 1 3 # 43 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitstatus.h" 1 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 66 "/usr/include/bits/waitstatus.h" 2 3 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; # 84 "/usr/include/bits/waitstatus.h" 3 } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; # 97 "/usr/include/bits/waitstatus.h" 3 } __wait_stopped; }; # 44 "/usr/include/stdlib.h" 2 3 # 57 "/usr/include/stdlib.h" 3 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 83 "/usr/include/stdlib.h" 3 # 95 "/usr/include/stdlib.h" 3 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 274 "/usr/include/stdlib.h" 3 extern __inline double __attribute__ ((__nothrow__)) atof (__const char *__nptr) { return strtod (__nptr, (char **) ((void*)0)); } extern __inline int __attribute__ ((__nothrow__)) atoi (__const char *__nptr) { return (int) strtol (__nptr, (char **) ((void*)0), 10); } extern __inline long int __attribute__ ((__nothrow__)) atol (__const char *__nptr) { return strtol (__nptr, (char **) ((void*)0), 10); } __extension__ extern __inline long long int __attribute__ ((__nothrow__)) atoll (__const char *__nptr) { return strtoll (__nptr, (char **) ((void*)0), 10); } extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 321 "/usr/include/stdlib.h" 2 3 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/alloca.h" 2 3 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 531 "/usr/include/stdlib.h" 3 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 554 "/usr/include/stdlib.h" 3 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__)); extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 633 "/usr/include/stdlib.h" 3 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 656 "/usr/include/stdlib.h" 3 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 710 "/usr/include/stdlib.h" 3 extern int system (__const char *__command) ; # 727 "/usr/include/stdlib.h" 3 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 751 "/usr/include/stdlib.h" 3 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 932 "/usr/include/stdlib.h" 3 # 943 "/usr/include/stdlib.h" 3 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 960 "/usr/include/stdlib.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c" 2 Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:593) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:593) Locate a functional CUDA compiler Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/nvcc...not found Checking for program /global/homes/m/madams/git-fat/nvcc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/nvcc...not found Checking for program /usr/common/usg/bin/nvcc...not found Checking for program /usr/common/mss/bin/nvcc...not found Checking for program /usr/common/nsg/bin/nvcc...not found Checking for program /usr/lib64/qt-3.3/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/nvcc...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/nvcc...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/nvcc...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/nvcc...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/nvcc...not found Checking for program /usr/syscom/nsg/sbin/nvcc...not found Checking for program /usr/syscom/nsg/bin/nvcc...not found Checking for program /usr/share/Modules/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /usr/local/sbin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /global/homes/m/madams/nvcc...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/nvcc...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/nvcc...not found Checking for program /global/homes/m/madams/git-fat/nvcc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/nvcc...not found Checking for program /usr/common/usg/bin/nvcc...not found Checking for program /usr/common/mss/bin/nvcc...not found Checking for program /usr/common/nsg/bin/nvcc...not found Checking for program /usr/lib64/qt-3.3/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/nvcc...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/nvcc...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/nvcc...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/nvcc...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/nvcc...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/nvcc...not found Checking for program /usr/syscom/nsg/sbin/nvcc...not found Checking for program /usr/syscom/nsg/bin/nvcc...not found Checking for program /usr/share/Modules/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /usr/local/sbin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /global/homes/m/madams/nvcc...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:631) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:631) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:743) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:743) Locate a functional Cxx compiler Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiicpc...not found Checking for program /global/homes/m/madams/git-fat/mpiicpc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiicpc...not found Checking for program /usr/common/usg/bin/mpiicpc...not found Checking for program /usr/common/mss/bin/mpiicpc...not found Checking for program /usr/common/nsg/bin/mpiicpc...not found Checking for program /usr/lib64/qt-3.3/bin/mpiicpc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiicpc...found Defined make macro "CXX" to "mpiicpc" Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:781) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:781) Locate a functional Cxx preprocessor Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiicpc...not found Checking for program /global/homes/m/madams/git-fat/mpiicpc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiicpc...not found Checking for program /usr/common/usg/bin/mpiicpc...not found Checking for program /usr/common/mss/bin/mpiicpc...not found Checking for program /usr/common/nsg/bin/mpiicpc...not found Checking for program /usr/lib64/qt-3.3/bin/mpiicpc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiicpc...found Defined make macro "CXXCPP" to "mpiicpc -E" Pushing language Cxx Executing: mpiicpc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conffix.h" 1 extern "C" { } # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc" 2 # 1 "/usr/include/c++/4.4.6/cstdlib" 1 3 # 42 "/usr/include/c++/4.4.6/cstdlib" 3 # 1 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 4 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 2 3 # 1445 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1608 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1618 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1628 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1649 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1668 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1683 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 1 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/os_defines.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 40 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/os_defines.h" 2 3 # 1688 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 2 3 # 1 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/cpu_defines.h" 1 3 # 1691 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 2 3 # 1740 "/usr/include/c++/4.4.6/x86_64-redhat-linux/bits/c++config.h" 3 # 44 "/usr/include/c++/4.4.6/cstdlib" 2 3 # 1 "/usr/include/c++/4.4.6/cstddef" 1 3 # 42 "/usr/include/c++/4.4.6/cstddef" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 45 "/usr/include/c++/4.4.6/cstddef" 2 3 namespace std __attribute__ ((__visibility__ ("default"))) { using ::ptrdiff_t; using ::size_t; } # 45 "/usr/include/c++/4.4.6/cstdlib" 2 3 # 67 "/usr/include/c++/4.4.6/cstdlib" 3 # 1 "/usr/include/stdlib.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 34 "/usr/include/stdlib.h" 2 3 extern "C" { # 1 "/usr/include/bits/waitflags.h" 1 3 # 43 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitstatus.h" 1 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 66 "/usr/include/bits/waitstatus.h" 2 3 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; # 84 "/usr/include/bits/waitstatus.h" 3 } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; # 97 "/usr/include/bits/waitstatus.h" 3 } __wait_stopped; }; # 44 "/usr/include/stdlib.h" 2 3 # 57 "/usr/include/stdlib.h" 3 # 75 "/usr/include/stdlib.h" 3 # 83 "/usr/include/stdlib.h" 3 # 95 "/usr/include/stdlib.h" 3 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) throw () ; extern double atof (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 237 "/usr/include/stdlib.h" 2 3 extern long int strtol_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern unsigned long int strtoul_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern long long int strtoll_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern unsigned long long int strtoull_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern double strtod_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern float strtof_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern long double strtold_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern __inline __attribute__ ((__gnu_inline__)) double atof (__const char *__nptr) throw () { return strtod (__nptr, (char **) __null); } extern __inline __attribute__ ((__gnu_inline__)) int atoi (__const char *__nptr) throw () { return (int) strtol (__nptr, (char **) __null, 10); } extern __inline __attribute__ ((__gnu_inline__)) long int atol (__const char *__nptr) throw () { return strtol (__nptr, (char **) __null, 10); } __extension__ extern __inline __attribute__ ((__gnu_inline__)) long long int atoll (__const char *__nptr) throw () { return strtoll (__nptr, (char **) __null, 10); } extern char *l64a (long int __n) throw () ; extern long int a64l (__const char *__s) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 extern "C" { # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 56 "/usr/include/sys/types.h" 3 typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 94 "/usr/include/sys/types.h" 3 typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef long int __fd_mask; typedef struct { __fd_mask fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern "C" { extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); } # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) throw (); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) throw (); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw (); __extension__ extern __inline __attribute__ ((__gnu_inline__)) unsigned int gnu_dev_major (unsigned long long int __dev) throw () { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline __attribute__ ((__gnu_inline__)) unsigned int gnu_dev_minor (unsigned long long int __dev) throw () { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline __attribute__ ((__gnu_inline__)) unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw () { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:898) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:898) Locate a functional Fortran compiler Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiifort...not found Checking for program /global/homes/m/madams/git-fat/mpiifort...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiifort...not found Checking for program /usr/common/usg/bin/mpiifort...not found Checking for program /usr/common/mss/bin/mpiifort...not found Checking for program /usr/common/nsg/bin/mpiifort...not found Checking for program /usr/lib64/qt-3.3/bin/mpiifort...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiifort...found Defined make macro "FC" to "mpiifort" Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:917) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:917) Make sure fortran comment "!" works Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:980) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:980) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1013) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1013) ================================================================================ TEST checkArchiver from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1112) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1112) Check that the archiver exists and can make a library usable by the compiler Pushing language C Executing: ar -V stdout: GNU ar version 2.20.51.0.2-5.34.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar version 2.20.51.0.2-5.34.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/ar...not found Checking for program /global/homes/m/madams/git-fat/ar...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/ar...not found Checking for program /usr/common/usg/bin/ar...not found Checking for program /usr/common/mss/bin/ar...not found Checking for program /usr/common/nsg/bin/ar...not found Checking for program /usr/lib64/qt-3.3/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/ar...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/ar...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/ar...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/ar...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/ar...not found Checking for program /usr/syscom/nsg/sbin/ar...not found Checking for program /usr/syscom/nsg/bin/ar...not found Checking for program /usr/share/Modules/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/ranlib...not found Checking for program /global/homes/m/madams/git-fat/ranlib...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/ranlib...not found Checking for program /usr/common/usg/bin/ranlib...not found Checking for program /usr/common/mss/bin/ranlib...not found Checking for program /usr/common/nsg/bin/ranlib...not found Checking for program /usr/lib64/qt-3.3/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/ranlib...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/ranlib...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/ranlib...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/ranlib...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/ranlib...not found Checking for program /usr/syscom/nsg/sbin/ranlib...not found Checking for program /usr/syscom/nsg/bin/ranlib...not found Checking for program /usr/share/Modules/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconf1.a /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconf1.a Possible ERROR while running ranlib: exit code 256 stderr: /usr/bin/ranlib: '-c': No such file Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar version 2.20.51.0.2-5.34.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar version 2.20.51.0.2-5.34.el6 20100205 Copyright 2009 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/ar...not found Checking for program /global/homes/m/madams/git-fat/ar...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/ar...not found Checking for program /usr/common/usg/bin/ar...not found Checking for program /usr/common/mss/bin/ar...not found Checking for program /usr/common/nsg/bin/ar...not found Checking for program /usr/lib64/qt-3.3/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/ar...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/ar...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/ar...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/ar...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/ar...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/ar...not found Checking for program /usr/syscom/nsg/sbin/ar...not found Checking for program /usr/syscom/nsg/bin/ar...not found Checking for program /usr/share/Modules/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/ranlib...not found Checking for program /global/homes/m/madams/git-fat/ranlib...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/ranlib...not found Checking for program /usr/common/usg/bin/ranlib...not found Checking for program /usr/common/mss/bin/ranlib...not found Checking for program /usr/common/nsg/bin/ranlib...not found Checking for program /usr/lib64/qt-3.3/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/ranlib...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/ranlib...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/ranlib...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/ranlib...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/ranlib...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/ranlib...not found Checking for program /usr/syscom/nsg/sbin/ranlib...not found Checking for program /usr/syscom/nsg/bin/ranlib...not found Checking for program /usr/share/Modules/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconf1.a /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconf1.a Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1223) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1223) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Executing: /usr/bin/ar cr /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconftest.a /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o ; /usr/bin/ranlib /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconftest.a Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension a Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1301) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1301) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C Executing: uname -s stdout: Linux Executing: mpiicc -V Trying C linker flag -Wl,-rpath, Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -Wl,-rpath,/chos/global/u2/m/madams/petsc -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/chos/global/u2/m/madams/petsc Popping language C Pushing language Cxx Executing: uname -s stdout: Linux Executing: mpiicc -V Trying Cxx linker flag -Wl,-rpath, Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -Wl,-rpath,/chos/global/u2/m/madams/petsc -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/chos/global/u2/m/madams/petsc Popping language Cxx Pushing language FC Executing: uname -s stdout: Linux Executing: mpiicc -V Trying FC linker flag -Wl,-rpath, Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -Wl,-rpath,/chos/global/u2/m/madams/petsc -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/chos/global/u2/m/madams/petsc Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1336) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1336) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1385) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1385) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.headers Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/dlfcn.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/dlfcn.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/dlfcn.h" 2 3 # 1 "/usr/include/bits/dlfcn.h" 1 3 # 29 "/usr/include/dlfcn.h" 2 3 # 51 "/usr/include/dlfcn.h" 3 extern void *dlopen (__const char *__file, int __mode) __attribute__ ((__nothrow__)); extern int dlclose (void *__handle) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void *dlsym (void *__restrict __handle, __const char *__restrict __name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 79 "/usr/include/dlfcn.h" 3 extern char *dlerror (void) __attribute__ ((__nothrow__)); # 187 "/usr/include/dlfcn.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] Pushing language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: /usr/bin/ar -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconftest.so /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ar: no operation specified Checking dynamic linker mpiicc using flags ['-shared'] Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mpiicc...not found Checking for program /global/homes/m/madams/git-fat/mpiicc...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mpiicc...not found Checking for program /usr/common/usg/bin/mpiicc...not found Checking for program /usr/common/mss/bin/mpiicc...not found Checking for program /usr/common/nsg/bin/mpiicc...not found Checking for program /usr/lib64/qt-3.3/bin/mpiicc...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mpiicc...found Defined make macro "DYNAMICLINKER" to "mpiicc" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -shared -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o: relocation R_X86_64_PC32 against undefined symbol `__intel_new_feature_proc_init' can not be used when making a shared object; recompile with -fPIC x86_64-k1om-linux-ld: final link failed: Bad value Rejecting linker flag -shared due to nonzero status from link Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/libconftest.so -mmic -mkl -fp-model precise /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' Unable to find working dynamic linker ================================================================================ TEST output from config.setCompilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/setCompilers.py:1431) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1431) Output module data as defines and substitutions Substituting "CC" with "mpiicc" Substituting "CFLAGS" with "-mmic -mkl -fp-model precise" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpiicc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpiicpc" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-mmic -mkl -fp-model precise" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpiicpc -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpiifort" Substituting "FFLAGS" with "-mmic -mkl -fp-model precise" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/sharedLibraries.py:37) TESTING: checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:37) ================================================================================ TEST configureSharedLibraries from PETSc.utilities.sharedLibraries(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/sharedLibraries.py:53) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:53) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.utilities.sharedLibraries(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/sharedLibraries.py:96) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:96) Checks whether dynamic loading is available (with dlfcn.h and libdl) ================================================================================ TEST configureSerializedFunctions from PETSc.utilities.sharedLibraries(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/sharedLibraries.py:102) TESTING: configureSerializedFunctions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:102) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilerFlags.py:71) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:71) Get the default compiler flags Pushing language C Executing: mpiicc --version stdout: icc (ICC) 15.0.0 20140723 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. getCompilerVersion: mpiicc icc (ICC) 15.0.0 20140723 Ignoring default options which were overridden using --CFLAGS -mmic -mkl -fp-model precise Executing: mpiicc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Executing: mpiicc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Executing: mpiicc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Trying C compiler flag -O3 Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -O3 Popping language C Pushing language Cxx Executing: mpiicpc --version stdout: icpc (ICC) 15.0.0 20140723 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. getCompilerVersion: mpiicpc icpc (ICC) 15.0.0 20140723 Ignoring default options which were overridden using --CXXFLAGS -mmic -mkl -fp-model precise Executing: mpiicpc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Executing: mpiicpc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Executing: mpiicpc --help stdout: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. -mgpu-arch=[,] build offload code for graphics to run on a particular graphics processor ivybridge - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Ivy Bridge. haswell - May generate instructions for the graphics processor that is on Intel(R) microarchitecture code name Haswell Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-calloc enable/disable(DEFAULT) calls to fast calloc function -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-task= choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for target pragmas. This option only applies to Intel(R) MIC Architecture and Intel(R) Graphics Technology. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. [no]expr-source-pos Controls output of source positions for expressions. [no]macros Controls output of debug information for preprocessor macros. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-mpx= Enables bounds checking using Intel(R) MPX support. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE and on targets with Intel(R) MPX support. -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-narrowing When this is disabled, Pointer Checker will not give an error when pointers to a structure field are moved to fields in the same structure. This switch is only valid with Intel(R) Parallel Studio XE -f[no-]emit-class-debug-always Emit debug information for a C++ class into each object file where the class is used. This flag is useful for tools which are unable to resolve incomplete type descriptions. Using this option may cause a large increase in the size of the debug information. -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -no-gcc-include-dir Do not add the gcc version specific system include directory -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 conforms to ISO/IEC 9899:1999 standard for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 c89 conforms to ISO/IEC 9899:1990 standard for C programs gnu89 conforms to ISO C90 plus GNU extensions gnu99 conforms to ISO C99 plus GNU extensions gnu++98 conforms to 1998 ISO C++ standard plus GNU extensions gnu++11 conforms to 2011 ISO C++ standard plus GNU extensions gnu++0x same as gnu++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type Issue warnings when a function is declared without a return type or when the definition of a function returning void contains a return statement with an expression -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -W[no-]ic-pointer warn for conversions between pointers to distinct scalar types with the same representation -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: thread - diagnostics to aid in thread-enabling source power - controls whether diagnostics are enabled for possibly inefficient code that may affect power consumption when running on Intel(R) processors port-win - diagnostics for GNU extensions that may cause errors when porting to Windows openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted -diag-once=[,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time -standalone create standalone compilation environment, helpful for bootstrap environments where gcc is not available during the build Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -mlong-double-64 enable 64-bit 'long double' 80-bit floating-point type is available as __float80. -mlong-double-80 enable 80-bit 'long double' Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -std=c9x use -std=c99 -fmudflap no replacement -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Trying Cxx compiler flag -O3 Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -O3 Popping language Cxx Pushing language FC Executing: mpiifort --version stdout: ifort (IFORT) 15.0.0 20140723 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. getCompilerVersion: mpiifort ifort (IFORT) 15.0.0 20140723 Ignoring default options which were overridden using --FFLAGS -mmic -mkl -fp-model precise Executing: mpiifort --help stdout: Intel(R) Fortran Compiler Help ============================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: ifort [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a Fortran source (.f .for .ftn .f90 .fpp .F .FOR .F90 .i .i90), assembly (.s .S), object (.o), static library (.a), or other linkable file Commonly used options may be placed in the ifort .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -arch generate specialized code to optimize for processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions SSE3 May generate Intel(R) SSE3, SSE2 and SSE instructions SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2 and SSE instructions SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions AVX May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -f[no-]exceptions enable(DEFAULT)/disable exception handling -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no]pad enable/disable(DEFAULT) changing variable and array memory layout -safe-cray-ptr Cray pointers do not alias with other variables -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -reentrancy specify whether the threaded, reentrant run-time support should be used Keywords: none (same as -noreentrancy), threaded, async -noreentrancy do not use threaded, reentrant run-time support -heap-arrays [n] temporary arrays of minimum size n (in kilobytes) are allocated in heap memory rather than on the stack. If n is not specified, all temporary arrays are allocated in heap memory. -no-heap-arrays temporary arrays are allocated on the stack (DEFAULT) -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -coarray[=] enable/disable(DEFAULT) coarray syntax for data parallel programming, and set the relationship between the coarray images. keywords: shared - default if keyword is omitted single - overrides any other keyword distributed - only valid with the Intel(R) Cluster Toolkit coprocessor - Intel(R) 64 Linux only -coarray-num-images=n set default number of coarray images -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using SIMD directive -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for TARGET directives. This option only applies to Intel(R) MIC Architecture. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -rounding-mode chopped set internal FPU rounding control to truncate -[no-]ftz enable/disable flush denormal results to zero -fpe{0|1|3} specifies program-wide behavior on floating point exceptions -fpe-all={0|1|3} specifies floating point exception behavior on all functions and subroutines. Also sets -assume ieee_fpe_flags -[no]fltconsistency specify that improved floating-point consistency should be used -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -[no]recursive compile all procedures for possible recursive execution -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with ATTRIBUTES INLINE or FORCEINLINE n=2 inline any function, at the compiler's discretion -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -list[=] specify that a listing file should be generated -list-line-len=# overrides the default line length (80) in a listing file -list-page-len=# overrides the default page length (66) in a listing file -show controls the contents of the listing file keywords: all, none, [no]include, [no]map, [no]options -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -debug-parameters [keyword] Control output of debug information for PARAMETERS. Valid [keyword] values: none - Disables generation of debug information for PARAMETERs. used - Generates debug information for referenced PARAMETERs only. all - Generates debug information for all PARAMETERs. -nodebug-parameters Same as "-debug-parameters none". -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -[no]d-lines compile debug statements (indicated by D in column 1) -DD compile debug statements, indicated by D in column 1. This option prevents the definition of a macro named D using the command line -Dname option (use -Dname=n syntax instead) -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -D[=] define macro -nodefines, -noD specifies that any -D macros go to the preprocessor only, and not to the compiler -U remove predefined macro -allow nofpp-comments If a Fortran end-of-line comment is seen within a #define, treat it as part of the definition. Default is allow:fpp-comments -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -preprocess-only same as -P -[no]keep keep/remove preprocessed file generated by preprocessor as input to compiler stage. Not affected by -save-temps. Default is -nokeep -[no]fpp run Fortran preprocessor on source files prior to compilation -module path specify path where mod files should be placed and first location to look for mod files -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -B find libraries, headers and executables in -gen-dep[=filename] generate dependency information. If no filename is specified, output is to stdout. Similar to -MD or -MMD If a filename is specified, output is to filename. Similar to -MF filename -no-gen-dep do not generate dependency information (default) -gen-depformat=keyword generate dependency information in the specified format. One of: make, nmake Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -[no]altparam specify if alternate form of parameter constant declarations (without parenthesis) is recognized. Default is to recognize -assume specify assumptions made by the optimizer and code generator keywords: none, [no]byterecl, [no]buffered_io, [no]buffered_stdout, [no]bscc (nobscc same as -nbs), [no]cc_omp, [no]minus0, [no]dummy_aliases (same as -common-args), [no]ieee_fpe_flags, [no]fpe_summary, [no]old_boz, [no]old_complex_align, [no]old_logical_ldio, [no]old_ldout_format, [no]old_maxminloc, [no]old_unit_star, [no]old_xor, [no]protect_constants, [no]protect_parens, [no]realloc_lhs, [no]2underscore, [no]underscore (same as -us), [no]std_intent_in, [no]std_minus0_rounding, [no]std_mod_proc_name, [no]std_value, [no]source_include, [no]split_common, [no]writeable_strings -ccdefault specify default carriage control for units 6 and * keywords: default, fortran, list or none -[no]check check run-time conditions. Default is -nocheck keywords: all (same as -C), none (same as -nocheck), [no]arg_temp_created, [no]bounds (same as -CB), [no]format, [no]output_conversion, [no]pointer (same as -CA), [no]assume, [no]uninit (same as -CU), [no]stack -common-args assume "by reference" subprogram arguments may alias one another. Same as -assume dummy_aliases -e03 issue errors for language elements that are not standard in Fortran 2003 (same as -stand f03 -warn stderrors options) -e95 issue errors for language elements that are not standard in Fortran 95 (same as -stand f95 -warn stderrors options) -e90 issue errors for language elements that are not standard in Fortran 90 (same as -stand f90 -warn stderrors options) -[no]extend-source [] specify rightmost column for fixed form sources keywords: 72 (same as -noextend-source and -72), 80 (same as -80), 132 (same as -132. Default if you specify -extend-source without a keyword.) -fixed specify source files are in fixed format. Same as -FI -nofixed indicates free format -free specify source files are in free format. Same as -FR -nofree indicates fixed format -[no]mixed-str-len-arg indicate whether hidden lengths are passed after their character argument or after all arguments. -names specify how source code identifiers and external names are interpreted. keywords: as_is, lowercase, uppercase -[no]pad-source make compiler acknowledge blanks at the end of a line -stand [] specifies level of conformance with ANSI standard to check for. If keyword is not specified, level of conformance is f03 keywords: f90 (same as -std90), f95(same as -std95), f03(same as -std95), none (same as -nostand) -standard-semantics explicitly sets assume keywords to conform to the semantics of the Fortran standard. May result in performance loss. assume keywords set by -standard-semantics: byterecl, fpe_summary, minus0, noold_ldout_format, noold_maxminloc, noold_unit_star, noold_xor, protect_parens, realloc_lhs, std_intent_in, std_minus0_rounding, std_mod_proc_name, std_value also sets -fpscomp logicals If -fp-model=strict or -fp-model=except is set then this also sets assume keyword ieee_fpe_flags -syntax-only perform syntax and semantic checking only (no object file produced) -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) -[no-]wrap-margin controls right margin wrapping in list-directed output. By default, list-directed output is wrapped at 80 characters. Compiler Diagnostics -------------------- -w disable all warnings -W disable warnings (n = 0) or show warnings (n = 1 DEFAULT, same as -warn general) -warn specifies the level of warning messages issued keywords: all, none (same as -nowarn) [no]alignments, [no]declarations, [no]errors, [no]general, [no]ignore_loc, [no]interfaces, [no]stderrors, [no]truncated_source, [no]uncalled, [no]unused, [no]usage -nowarn suppress all warning messages -WB turn a compile-time bounds check into a warning -Winline enable inline diagnostics -[no]traceback specify whether the compiler generates PC correlation data used to display a symbolic traceback rather than a hexadecimal traceback at runtime failure -[no]gen-interfaces[:[no]source] generate interface blocks for all routines in the file. Can be checked using -warn interfaces nosource indicates temporary source files should not be saved -error-limit specify the maximum number of error-level or fatal-level compiler errors allowed -noerror-limit set no maximum number on error-level or fatal-level error messages -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted Miscellaneous ------------- -[no]logo display compiler version information. -nologo disables the output -V display compiler version information -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -what display detailed compiler version information -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -Tf compile file as Fortran source -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -i{2|4|8} set default KIND of integer and logical variables to 2, 4, or 8 -integer-size specifies the default size of integer and logical variables size: 16, 32, 64 -r{8|16} set default size of real to 8 or 16 bytes -real-size specify the size of REAL and COMPLEX declarations, constants, functions, and intrinsics size: 32, 64, 128 -autodouble same as -real-size 64 or -r8 -double-size defines the size of DOUBLE PRECISION and DOUBLE COMPLEX declarations, constants, functions, and intrinsics size: 64, 128 -[no]fpconstant extends the precision of single precision constants assigned to double precision variables to double precision -[no]intconstant use Fortran 77 semantics, rather than Fortran 90/95, to determine kind of integer constants -auto make all local variables AUTOMATIC -auto-scalar make scalar local variables AUTOMATIC (DEFAULT) -save save all variables (static allocation) (same as -noauto, opposite of -auto) -[no]zero enable/disable(DEFAULT) implicit initialization to zero of local scalar variables of intrinsic type INTEGER, REAL, COMPLEX, or LOGICAL that are saved and not initialized -init= enable/disable(DEFAULT) implicit initialization of local variables of intrinsic type INTEGER, REAL, COMPLEX, or LOGICAL that are saved and not initialized The specifies the initial value keywords: zero (same as -zero), snan (valid only for floating point variables), arrays -dyncom make given common blocks dynamically-allocated -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -[no]align analyze and reorder memory layout for variables and arrays -align specify how data items are aligned keywords: all (same as -align), none (same as -noalign), [no]commons, [no]dcommons, [no]qcommons, [no]zcommons, rec1byte, rec2byte, rec4byte, rec8byte, rec16byte, rec32byte, array8byte, array16byte, array32byte, array64byte, array128byte, array256byte, [no]records, [no]sequence -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -convert specify the format of unformatted files containing numeric data keywords: big_endian, cray, ibm, little_endian, native, vaxd, vaxg -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden Compatibility ------------- -fpscomp specify the level of compatibility to adhere to with Fortran PowerStation keywords: all, none (same as -nofpscomp), [no]filesfromcmd, [no]general, [no]ioformat, [no]ldio_spacing, [no]libs, [no]logicals -nofpscomp no specific level of compatibility with Fortran PowerStation -f66, -66 allow extensions that enhance FORTRAN-66 compatibility -f77rtl specify that the Fortran 77 specific run-time support should be used -nof77rtl disables -vms enable VMS I/O statement extensions -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -cxxlib link using C++ run-time libraries -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -nofor-main do not link against Fortran main object. Used when linking Fortran objects with C main program -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -threads specify that multi-threaded libraries should be linked against -nothreads disables multi-threaded libraries -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -fwritable-strings use -assume writeable-strings -1, -66, -onetrip use -f66 -pthread use -reentrancy threaded -arch pn* use -arch -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Executing: mpiifort --help stdout: Intel(R) Fortran Compiler Help ============================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: ifort [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a Fortran source (.f .for .ftn .f90 .fpp .F .FOR .F90 .i .i90), assembly (.s .S), object (.o), static library (.a), or other linkable file Commonly used options may be placed in the ifort .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. ATOM_SSE4.2 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSE4.2, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for Intel(R) Atom(TM) processors that support Intel(R) SSE4.2 and MOVBE instructions. ATOM_SSSE3 May generate MOVBE instructions for Intel(R) processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor that support Intel(R) SSE and MOVBE instructions. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. Optimizes for Intel(R) processors that support Intel(R) AVX-512 instructions. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. MIC-AVX512 May generate Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) Foundation instructions, Intel(R) AVX-512 Conflict Detection instructions, Intel(R) AVX-512 Exponential and Reciprocal instructions, Intel(R) AVX-512 Prefetch instructions for Intel(R) processors, and the instructions enabled with CORE-AVX2. -arch generate specialized code to optimize for processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions SSE3 May generate Intel(R) SSE3, SSE2 and SSE instructions SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2 and SSE instructions SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions AVX May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2 and SSE instructions -mcpu= same as -mtune= -mtune= optimize for a specific slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -march= generate code exclusively for a given slm - processors that support Intel(R) SSE4.2 and MOVBE instructions core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with ATOM_SSSE3 (requires -xATOM_SSSE3) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -f[no-]fat-lto-objects enable/disable generation of true code/data when generating an IL object using -ipo -c. Objects generated with -ffat-lto-objects or -fno-fat-lto-objects are added unmodified to an archive when using xiar. xiar behavior remains unchanged for an IL object generated without specifying -f[no-]fat-lto-objects. -f[no-]exceptions enable(DEFAULT)/disable exception handling -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no]pad enable/disable(DEFAULT) changing variable and array memory layout -safe-cray-ptr Cray pointers do not alias with other variables -[no-]ansi-alias enable(DEFAULT)/disable use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -reentrancy specify whether the threaded, reentrant run-time support should be used Keywords: none (same as -noreentrancy), threaded, async -noreentrancy do not use threaded, reentrant run-time support -heap-arrays [n] temporary arrays of minimum size n (in kilobytes) are allocated in heap memory rather than on the stack. If n is not specified, all temporary arrays are allocated in heap memory. -no-heap-arrays temporary arrays are allocated on the stack (DEFAULT) -q[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -qopt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -vecabi= select vector function ABI legacy - use the legacy vector function ABI compat - use the compatibility vector function ABI (DEFAULT) -qopt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -qopt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -qno-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -qopt-block-factor= specify blocking factor for loop blocking -qopt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -q[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -coarray[=] enable/disable(DEFAULT) coarray syntax for data parallel programming, and set the relationship between the coarray images. keywords: shared - default if keyword is omitted single - overrides any other keyword distributed - only valid with the Intel(R) Cluster Toolkit coprocessor - Intel(R) 64 Linux only -coarray-num-images=n set default number of coarray images -q[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using SIMD directive -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -qopt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -qno-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -qopt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -qno-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -qopt-prefetch=0 -qopt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -qopt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -qopt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -qopt-gather-scatter-unroll=n specify an alternative loop unroll sequence for gather and scatter loops (Intel(R) MIC Architecture specific). Disable with -qno-opt-gather-scatter-unroll (equivalent to n=0) -qopt-dynamic-align enable(DEFAULT) dynamic data alignment optimizations. Specify -qno-opt-dynamic-align to disable Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword[,keyword]] instrument program for profiling. Optional keywords are as follows. default - Produces an instrumented object file. This is the same as specifying the -prof-gen option with no keyword. srcpos - Produces an instrumented object file and information needed for using the code coverage tool. globdata - Produces an instrumented object file that includes information for global data layout. threadsafe - Collects PGO data with guards for threaded applications. -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[=n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -qopt-report[=n] generate an optimization report. Default destination is .optrpt. Levels of 0 - 5 are valid. Please see documentation for additional details of information provided by phase per level. 0 disable optimization report output 2 DEFAULT when enabled -qopt-report-file=[stdout | stderr | ] specify the filename or output stream for the generated report -qopt-report-stdout specify the generated report should be directed to stdout -qopt-report-per-object specify the generated report should be directed to a .optrpt file in the output directory (DEFAULT when another destination for the report is not specified) -qopt-report-phase=[,,...] specify one or more phases that reports are generated against -qopt-report-routine=[,,...] restrict the report to routines containing the given name -qopt-report-filter= restricts the opt-report to specific files, routines or line number ranges. Refer to the documentation for the specific syntax of parameter string. -qopt-report-format=[text|vs] specify the output format to be used for the opt-report as either plain text or a format for use in the Microsoft* Visual Studio IDE -q[no-]opt-report-embed When enabled, if an assembly file is being generated, special loop info annotations will be emitted in the assembly file. If an object file/executable is being generated, these will be emitted into the object file/executable for use by the Intel VTune Amplifier application. Automatically enabled when symbolic debug information is enabled. -qopt-report-help display the optimization phases available for reporting -qopt-report-names= Specifies whether mangled or unmangled names should appear in the optimization report. mangled - use mangled names unmangled - use unmangled names (DEFAULT) -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -qopenmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -qopenmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -qopenmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -qopenmp-lib= choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -qopenmp-link= choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -qopenmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report[=n] control the auto-parallelizer diagnostic level (n=0,1,2,3) -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information -qopenmp-simd Enables OpenMP* SIMD compilation. Enabled by default with -qopenmp. Use -qno-openmp-simd to disable. -qopenmp-offload Enables OpenMP* offloading compilation for TARGET directives. This option only applies to Intel(R) MIC Architecture. Enabled by default with -qopenmp. Use -qno-openmp-offload to disable. -f[no-]mpc_privatize Enables privatization of all static data for the MPC unified parallel runtime. This will cause calls to extended thread local storage resolution run-time routines which are not supported on standard linux distributions. This option is only usable in conjunction with the MPC unified parallel runtime. The default is -fno-mpc-privatize. Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision sets -assume protect_parens for Fortran strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision -mieee-fp maintain floating point precision (disables some optimizations) can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -rounding-mode chopped set internal FPU rounding control to truncate -[no-]ftz enable/disable flush denormal results to zero -fpe{0|1|3} specifies program-wide behavior on floating point exceptions -fpe-all={0|1|3} specifies floating point exception behavior on all functions and subroutines. Also sets -assume ieee_fpe_flags -[no]fltconsistency specify that improved floating-point consistency should be used -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -[no]recursive compile all procedures for possible recursive execution -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the input arguments domain on which math functions must provide correct results. classlist - defined as one of the following values nans, infinities, denormals, zeros all, none, common funclist - optional list of one or more math library functions to which the attribute should be applied. Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with ATTRIBUTES INLINE or FORCEINLINE n=2 inline any function, at the compiler's discretion -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR\) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR\) -o name output file -list[=] specify that a listing file should be generated -list-line-len=# overrides the default line length (80) in a listing file -list-page-len=# overrides the default page length (66) in a listing file -show controls the contents of the listing file keywords: all, none, [no]include, [no]map, [no]options -g[level] Produce symbolic debug information. Valid [level] values: 0 - Disable generation of symbolic debug information. 1 - Emit minimal debug information for performing stack traces. 2 - Emit complete debug information. (default for -g) 3 - Emit extra information which may be useful for some tools. -gdwarf- Enable generation of debug information using the specified DWARF version. These options may require additional tools such as linkers and debuggers which support these formats. Valid values: 2 - DWARF Debug Information Format Version 2. 3 - DWARF Debug Information Format Version 3. (default for -g) 4 - DWARF Debug Information Format Version 4. -debug [keyword] Control the emission of debug information. Valid [keyword] values: none Disables debug generation. all, full (default if no keyword was specified) Generates complete debug information. minimal Generates line number information. extended Generates complete debug information with semantic stepping and variable locations enabled. [no]variable-locations Controls additional debug information useful for tracking variable values in optimized code. [no]semantic-stepping Controls additional debug information useful for stepping through optimized code. [no]pubnames Controls generation of the DWARF .debug_pubnames section. [no]emit-column Controls additional line number information with columns. [no]inline-debug-info Controls additional debug information for inlined code. parallel Emit code instrumentation useful for thread data sharing and reentrant call detection. -debug-parameters [keyword] Control output of debug information for PARAMETERS. Valid [keyword] values: none - Disables generation of debug information for PARAMETERs. used - Generates debug information for referenced PARAMETERs only. all - Generates debug information for all PARAMETERs. -nodebug-parameters Same as "-debug-parameters none". -fvar-tracking Same as "-debug variable-locations". -fvar-tracking-assignments Same as "-debug semantic-stepping". -grecord-gcc-switches Record command line options in the DW_AT_producer attribute in the DWARF debugging information. -fno-merge-debug-strings Do not merge identical debug strings in different object files. -fno-merge-constants Do not merge identical string constants in different object files. -[no]d-lines compile debug statements (indicated by D in column 1) -DD compile debug statements, indicated by D in column 1. This option prevents the definition of a macro named D using the command line -Dname option (use -Dname=n syntax instead) -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -f[no-]eliminate-unused-debug-types When disabled, debug information for all types present in the sources will be emitted. Using this option may cause a large increase in the size of the debug information. Preprocessor ------------ -D[=] define macro -nodefines, -noD specifies that any -D macros go to the preprocessor only, and not to the compiler -U remove predefined macro -allow nofpp-comments If a Fortran end-of-line comment is seen within a #define, treat it as part of the definition. Default is allow:fpp-comments -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -preprocess-only same as -P -[no]keep keep/remove preprocessed file generated by preprocessor as input to compiler stage. Not affected by -save-temps. Default is -nokeep -[no]fpp run Fortran preprocessor on source files prior to compilation -module path specify path where mod files should be placed and first location to look for mod files -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -B find libraries, headers and executables in -gen-dep[=filename] generate dependency information. If no filename is specified, output is to stdout. Similar to -MD or -MMD If a filename is specified, output is to filename. Similar to -MF filename -no-gen-dep do not generate dependency information (default) -gen-depformat=keyword generate dependency information in the specified format. One of: make, nmake Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -[no]altparam specify if alternate form of parameter constant declarations (without parenthesis) is recognized. Default is to recognize -assume specify assumptions made by the optimizer and code generator keywords: none, [no]byterecl, [no]buffered_io, [no]buffered_stdout, [no]bscc (nobscc same as -nbs), [no]cc_omp, [no]minus0, [no]dummy_aliases (same as -common-args), [no]ieee_fpe_flags, [no]fpe_summary, [no]old_boz, [no]old_complex_align, [no]old_logical_ldio, [no]old_ldout_format, [no]old_maxminloc, [no]old_unit_star, [no]old_xor, [no]protect_constants, [no]protect_parens, [no]realloc_lhs, [no]2underscore, [no]underscore (same as -us), [no]std_intent_in, [no]std_minus0_rounding, [no]std_mod_proc_name, [no]std_value, [no]source_include, [no]split_common, [no]writeable_strings -ccdefault specify default carriage control for units 6 and * keywords: default, fortran, list or none -[no]check check run-time conditions. Default is -nocheck keywords: all (same as -C), none (same as -nocheck), [no]arg_temp_created, [no]bounds (same as -CB), [no]format, [no]output_conversion, [no]pointer (same as -CA), [no]assume, [no]uninit (same as -CU), [no]stack -common-args assume "by reference" subprogram arguments may alias one another. Same as -assume dummy_aliases -e03 issue errors for language elements that are not standard in Fortran 2003 (same as -stand f03 -warn stderrors options) -e95 issue errors for language elements that are not standard in Fortran 95 (same as -stand f95 -warn stderrors options) -e90 issue errors for language elements that are not standard in Fortran 90 (same as -stand f90 -warn stderrors options) -[no]extend-source [] specify rightmost column for fixed form sources keywords: 72 (same as -noextend-source and -72), 80 (same as -80), 132 (same as -132. Default if you specify -extend-source without a keyword.) -fixed specify source files are in fixed format. Same as -FI -nofixed indicates free format -free specify source files are in free format. Same as -FR -nofree indicates fixed format -[no]mixed-str-len-arg indicate whether hidden lengths are passed after their character argument or after all arguments. -names specify how source code identifiers and external names are interpreted. keywords: as_is, lowercase, uppercase -[no]pad-source make compiler acknowledge blanks at the end of a line -stand [] specifies level of conformance with ANSI standard to check for. If keyword is not specified, level of conformance is f03 keywords: f90 (same as -std90), f95(same as -std95), f03(same as -std95), none (same as -nostand) -standard-semantics explicitly sets assume keywords to conform to the semantics of the Fortran standard. May result in performance loss. assume keywords set by -standard-semantics: byterecl, fpe_summary, minus0, noold_ldout_format, noold_maxminloc, noold_unit_star, noold_xor, protect_parens, realloc_lhs, std_intent_in, std_minus0_rounding, std_mod_proc_name, std_value also sets -fpscomp logicals If -fp-model=strict or -fp-model=except is set then this also sets assume keyword ieee_fpe_flags -syntax-only perform syntax and semantic checking only (no object file produced) -qopt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) -[no-]wrap-margin controls right margin wrapping in list-directed output. By default, list-directed output is wrapped at 80 characters. Compiler Diagnostics -------------------- -w disable all warnings -W disable warnings (n = 0) or show warnings (n = 1 DEFAULT, same as -warn general) -warn specifies the level of warning messages issued keywords: all, none (same as -nowarn) [no]alignments, [no]declarations, [no]errors, [no]general, [no]ignore_loc, [no]interfaces, [no]stderrors, [no]truncated_source, [no]uncalled, [no]unused, [no]usage -nowarn suppress all warning messages -WB turn a compile-time bounds check into a warning -Winline enable inline diagnostics -[no]traceback specify whether the compiler generates PC correlation data used to display a symbolic traceback rather than a hexadecimal traceback at runtime failure -[no]gen-interfaces[:[no]source] generate interface blocks for all routines in the file. Can be checked using -warn interfaces nosource indicates temporary source files should not be saved -error-limit specify the maximum number of error-level or fatal-level compiler errors allowed -noerror-limit set no maximum number on error-level or fatal-level error messages -diag-enable=[,,...] enable the specified diagnostics or diagnostic groups -diag-disable=[,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: openmp - diagnostics issued by the OpenMP* parallelizer warn - diagnostics that have "warning" severity level error - diagnostics that have "error" severity level remark - diagnostics that are remarks or comments vec - diagnostics issued by the vectorizer par - diagnostics issued by the auto-parallelizer cpu-dispatch - specifies the CPU dispatch remarks -diag-error=[,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning=[,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark=[,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit= specify the maximum number of errors emitted Miscellaneous ------------- -[no]logo display compiler version information. -nologo disables the output -V display compiler version information -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -what display detailed compiler version information -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -Tf compile file as Fortran source -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time Offload ------- -qoffload= define whether offload is enabled, and if enabled, whether CPU fallback is permitted keywords: none, optional, mandatory -qoffload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target() name - mic, gfx (gfx for C/C++ compilation only) -qoffload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic, gfx (gfx for C/C++ compilation only) tool - compiler, ld, as, jit (gfx only) -qno-offload disable any offload usage Data ---- -i{2|4|8} set default KIND of integer and logical variables to 2, 4, or 8 -integer-size specifies the default size of integer and logical variables size: 16, 32, 64 -r{8|16} set default size of real to 8 or 16 bytes -real-size specify the size of REAL and COMPLEX declarations, constants, functions, and intrinsics size: 32, 64, 128 -autodouble same as -real-size 64 or -r8 -double-size defines the size of DOUBLE PRECISION and DOUBLE COMPLEX declarations, constants, functions, and intrinsics size: 64, 128 -[no]fpconstant extends the precision of single precision constants assigned to double precision variables to double precision -[no]intconstant use Fortran 77 semantics, rather than Fortran 90/95, to determine kind of integer constants -auto make all local variables AUTOMATIC -auto-scalar make scalar local variables AUTOMATIC (DEFAULT) -save save all variables (static allocation) (same as -noauto, opposite of -auto) -[no]zero enable/disable(DEFAULT) implicit initialization to zero of local scalar variables of intrinsic type INTEGER, REAL, COMPLEX, or LOGICAL that are saved and not initialized -init= enable/disable(DEFAULT) implicit initialization of local variables of intrinsic type INTEGER, REAL, COMPLEX, or LOGICAL that are saved and not initialized The specifies the initial value keywords: zero (same as -zero), snan (valid only for floating point variables), arrays -dyncom make given common blocks dynamically-allocated -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -[no]align analyze and reorder memory layout for variables and arrays -align specify how data items are aligned keywords: all (same as -align), none (same as -noalign), [no]commons, [no]dcommons, [no]qcommons, [no]zcommons, rec1byte, rec2byte, rec4byte, rec8byte, rec16byte, rec32byte, array8byte, array16byte, array32byte, array64byte, array128byte, array256byte, [no]records, [no]sequence -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -convert specify the format of unformatted files containing numeric data keywords: big_endian, cray, ibm, little_endian, native, vaxd, vaxg -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden Compatibility ------------- -fpscomp specify the level of compatibility to adhere to with Fortran PowerStation keywords: all, none (same as -nofpscomp), [no]filesfromcmd, [no]general, [no]ioformat, [no]ldio_spacing, [no]libs, [no]logicals -nofpscomp no specific level of compatibility with Fortran PowerStation -f66, -66 allow extensions that enhance FORTRAN-66 compatibility -f77rtl specify that the Fortran 77 specific run-time support should be used -nof77rtl disables -vms enable VMS I/O statement extensions -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -gnu-prefix=prefix specify a prefix that will be added to the names of GNU utilities called from the compiler Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -cxxlib link using C++ run-time libraries -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -nofor-main do not link against Fortran main object. Used when linking Fortran objects with C main program -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -threads specify that multi-threaded libraries should be linked against -nothreads disables multi-threaded libraries -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -Ob use -inline-level= -use-asm No replacement -gcc-version use -gcc-name= -qopt-report [n] use -qopt-report[=n] -offload-attribute-target= use -qoffload-attribute-target= -offload-option,,, use -qoffload-option,,, -[no-]offload[=] use -q[no-]offload[=] -opt-args-in-regs= use -qopt-args-in-regs= -[no-]opt-assume-safe-padding use -q[no-]opt-assume-safe-padding -opt-block-factor= use -qopt-block-factor= -[no-]opt-calloc use -q[no-]opt-calloc -[no-]opt-class-analysis use -q[no-]opt-class-analysis -[no-]opt-dynamic-align use -q[no-]opt-dynamic-align -[no-]opt-gather-scatter-unroll use -q[no-]opt-gather-scatter-unroll -[no-]opt-jump-tables= use -q[no-]opt-jump-tables= -opt-malloc-options= use -qopt-malloc-options= -[no-]opt-matmul use -q[no-]opt-matmul -[no-]opt-mem-layout-trans= use -q[no-]opt-mem-layout-trans= -[no-]opt-multi-version-aggressive use -q[no-]opt-multi-version-aggressive -[no-]opt-prefetch[=] use -q[no-]opt-prefetch[=] -opt-prefetch-distance= use -qopt-prefetch-distance= -opt-ra-region-strategy[=] use -qopt-ra-region-strategy[=] -[no-]opt-report-embed use -q[no-]opt-report-embed -opt-report-file= use -qopt-report-file= -opt-report-filter= use -qopt-report-filter= -opt-report-format= use -qopt-report-format= -opt-report-phase= use -qopt-report-phase= -opt-report-routine= use -qopt-report-routine= -opt-report-help use -qopt-report-help -opt-report[=] use -qopt-report[=] -opt-report-per-object use -qopt-report-per-object -opt-streaming-cache-evict= use -qopt-streaming-cache-evict= -opt-streaming-stores= use -qopt-streaming-stores= -[no-]opt-subscript-in-range use -q[no-]opt-subscript-in-range -opt-threads-per-core= use -qopt-threads-per-core= -diag-enable=sc[n] No replacement -diag-enable=sc-{full|concise|precise} No replacement -diag-enable=sc-include No replacement -diag-enable=sc-single-file No replacement -diag-enable=sc-enums No replacement -diag-enable=sc-parallel[n] No replacement -vec-report[=n] use -qopt-report[=n] -qopt-report-phase=vec -par-report[=n] use -qopt-report[=n] -qopt-report-phase=par -[no-]openmp use -q[no-]openmp -openmp-lib= use -qopenmp-lib= -openmp-link= use -qopenmp-link= -[no-]openmp-offload use -q[no-]openmp-offload -[no-]openmp-simd use -q[no-]openmp-simd -openmp-stubs use -qopenmp-stubs -openmp-threadprivate= use -qopenmp-threadprivate= -openmp-report[=] use -qopenmp-report[=] -openmp-task= use -qopenmp-task= -openmp-report[=n] use -qopt-report[=n] -qopt-report-phase=openmp -fwritable-strings use -assume writeable-strings -1, -66, -onetrip use -f66 -pthread use -reentrancy threaded -arch pn* use -arch -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xSSE3_ATOM use -xSSSE3_ATOM -xSSSE3_ATOM use -xATOM_SSSE3 -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2014, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Trying FC compiler flag -O3 Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Added FC compiler flag -O3 Popping language FC ================================================================================ TEST configureDebugging from PETSc.utilities.debugging(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/debugging.py:25) TESTING: configureDebugging from PETSc.utilities.debugging(config/PETSc/utilities/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" =============================================================================== WARNING! Compiling PETSc with no debugging, this should only be done for timing and production runs. All development should be done when configured using --with-debugging=1 =============================================================================== ================================================================================ TEST checkRestrict from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:136) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:136) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c(5): error: expected a ";" float * restrict x;; ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:309) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:309) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:107) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:107) Check for C keyword: static inline Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:320) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:320) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ================================================================================ TEST checkCLibraries from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:163) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:163) Determines the libraries needed to link with C Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl stdout: mpiicc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved. Possible ERROR while running linker: stdout: mpiicc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved.stderr: icc version 15.0.0 (gcc version 4.7.0 compatibility) /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom -mP1OPT_version=15.0-intel64 -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=470 "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/iccoWoUMhas_.s -mIPOPT_activate -mGLOB_em64t -mGLOB_k1om_objects=TRUE -mGLOB_product_id_code=0x22006d91 -mGLOB_extended_instructions=0x10000 -mCG_allow_xmm=FALSE -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mP2OPT_disam_type_based_disam=2 -mP2OPT_disam_assume_ansi_c -mP2OPT_checked_disam_ansi_alias=TRUE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=0 -mP2OPT_offload_unique_var_string=icc1634236057DnSgeS -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_link -mIPOPT_ipo_activate -mIPOPT_mo_activate -mIPOPT_source_files_list=/global/scratch2/sd/madams/iccslisXjSMwN -mIPOPT_mo_global_data -mIPOPT_link_script_file=/global/scratch2/sd/madams/iccscriptVhGPE2 "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" "--eh-frame-hdr" "-dynamic-linker" "/lib64/ld-linux-k1om.so.2" "-m" "elf_k1om" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-o" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" "-ldl" "--enable-new-dtags" "-rpath" "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-rpath" "/opt/intel/mpi-rt/4.1" "-lmpigf" "-lmpi" "-lmpigi" "-ldl" "-lrt" "-lpthread" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "-Bstatic" "-limf" "-lsvml" "-lirng" "-Bdynamic" "-lm" "-Bstatic" "-lipgo" "-ldecimal" "--as-needed" "-Bdynamic" "-lcilkrts" "-lstdc++" "--no-as-needed" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc" "-Bdynamic" "-lpthread" "-Bstatic" "-lsvml" "-Bdynamic" "-lc" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc_s" "-Bdynamic" "-ldl" "-lc" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" -mIPOPT_il_in_obj -mIPOPT_ipo_activate_warn=FALSE -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_iccgz48Kk.o -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/iccwarchBdQ8KK -mGLOB_linker_version=2.22.52.20120302 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icctempfilegFTbXZ -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_iccgz48Kk.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE -mP1OPT_source_file_name=ipo_out.c -mP1OPT_max_rec_copy_size=256 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -mIPOPT_object_files=T -mIPOPT_assembly_files=/global/scratch2/sd/madams/iccalisrEZT0O -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/iccelisrLdP83 -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icceobjusGMgj -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/iccllisSfTLoy x86_64-k1om-linux-ld --sysroot=/usr/linux-k1om-4.7/linux-k1om /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-k1om.so.2 -m elf_k1om -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl --enable-new-dtags -rpath /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -rpath /opt/intel/mpi-rt/4.1 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic -Bstatic -limf -lsvml -lirng -Bdynamic -lm -Bstatic -lipgo -ldecimal --as-needed -Bdynamic -lcilkrts -lstdc++ --no-as-needed -lgcc -lgcc_s -Bstatic -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o Popping language C compilers: Checking arg mpiicc compilers: Unknown arg mpiicc compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg Intel(R) compilers: Unknown arg Intel(R) compilers: Checking arg MPI compilers: Unknown arg MPI compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg 4.1 compilers: Unknown arg 4.1 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg Linux* compilers: Unknown arg Linux* compilers: Checking arg Copyright(C) compilers: Unknown arg Copyright(C) compilers: Checking arg 2003-2014, compilers: Unknown arg 2003-2014, compilers: Checking arg Intel compilers: Unknown arg Intel compilers: Checking arg Corporation. compilers: Unknown arg Corporation. compilers: Checking arg All compilers: Unknown arg All compilers: Checking arg rights compilers: Unknown arg rights compilers: Checking arg reserved. compilers: Unknown arg reserved. compilers: Checking arg icc compilers: Unknown arg icc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 15.0.0 compilers: Unknown arg 15.0.0 compilers: Checking arg (gcc compilers: Unknown arg (gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 4.7.0 compilers: Unknown arg 4.7.0 compilers: Checking arg compatibility) compilers: Unknown arg compatibility) compilers: Checking arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom compilers: Unknown arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom compilers: Checking arg -mP1OPT_version=15.0-intel64 compilers: Unknown arg -mP1OPT_version=15.0-intel64 compilers: Checking arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Unknown arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Checking arg -mP1OPT_print_version=FALSE compilers: Unknown arg -mP1OPT_print_version=FALSE compilers: Checking arg -mCG_use_gas_got_workaround=F compilers: Unknown arg -mCG_use_gas_got_workaround=F compilers: Checking arg -mP2OPT_align_option_used=TRUE compilers: Unknown arg -mP2OPT_align_option_used=TRUE compilers: Checking arg -mGLOB_gcc_version=470 compilers: Unknown arg -mGLOB_gcc_version=470 compilers: Checking arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Unknown arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -mmic compilers: Unknown arg -mmic compilers: Checking arg -mkl compilers: Unknown arg -mkl compilers: Checking arg -fp-model compilers: Unknown arg -fp-model compilers: Checking arg precise compilers: Unknown arg precise compilers: Checking arg -O3 compilers: Unknown arg -O3 compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Found library directory: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Unknown arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /opt/intel/mpi-rt/4.1 compilers: Unknown arg /opt/intel/mpi-rt/4.1 compilers: Checking arg -lmpigf compilers: Found library : -lmpigf compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -lmpigi compilers: Found library : -lmpigi compilers: Checking arg -ldl compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lpthread" compilers: Found library : -lpthread compilers: Checking arg -mGLOB_cxx_limited_range=FALSE compilers: Unknown arg -mGLOB_cxx_limited_range=FALSE compilers: Checking arg -mCG_extend_parms=FALSE compilers: Unknown arg -mCG_extend_parms=FALSE compilers: Checking arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Unknown arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Checking arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/iccoWoUMhas_.s compilers: Unknown arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/iccoWoUMhas_.s compilers: Checking arg -mIPOPT_activate compilers: Unknown arg -mIPOPT_activate compilers: Checking arg -mGLOB_em64t compilers: Unknown arg -mGLOB_em64t compilers: Checking arg -mGLOB_k1om_objects=TRUE compilers: Unknown arg -mGLOB_k1om_objects=TRUE compilers: Checking arg -mGLOB_product_id_code=0x22006d91 compilers: Unknown arg -mGLOB_product_id_code=0x22006d91 compilers: Checking arg -mGLOB_extended_instructions=0x10000 compilers: Unknown arg -mGLOB_extended_instructions=0x10000 compilers: Checking arg -mCG_allow_xmm=FALSE compilers: Unknown arg -mCG_allow_xmm=FALSE compilers: Checking arg -mP3OPT_use_mspp_call_convention compilers: Unknown arg -mP3OPT_use_mspp_call_convention compilers: Checking arg -mP2OPT_subs_out_of_bound=FALSE compilers: Unknown arg -mP2OPT_subs_out_of_bound=FALSE compilers: Checking arg -mP2OPT_disam_type_based_disam=2 compilers: Unknown arg -mP2OPT_disam_type_based_disam=2 compilers: Checking arg -mP2OPT_disam_assume_ansi_c compilers: Unknown arg -mP2OPT_disam_assume_ansi_c compilers: Checking arg -mP2OPT_checked_disam_ansi_alias=TRUE compilers: Unknown arg -mP2OPT_checked_disam_ansi_alias=TRUE compilers: Checking arg -mGLOB_ansi_alias compilers: Unknown arg -mGLOB_ansi_alias compilers: Checking arg -mPGOPTI_value_profile_use=T compilers: Unknown arg -mPGOPTI_value_profile_use=T compilers: Checking arg -mGLOB_opt_report_use_source_name compilers: Unknown arg -mGLOB_opt_report_use_source_name compilers: Checking arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Unknown arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Checking arg -mP2OPT_il0_array_sections=TRUE compilers: Unknown arg -mP2OPT_il0_array_sections=TRUE compilers: Checking arg -mGLOB_offload_mode=0 compilers: Unknown arg -mGLOB_offload_mode=0 compilers: Checking arg -mP2OPT_offload_unique_var_string=icc1634236057DnSgeS compilers: Unknown arg -mP2OPT_offload_unique_var_string=icc1634236057DnSgeS compilers: Checking arg -mGLOB_opt_level=3 compilers: Unknown arg -mGLOB_opt_level=3 compilers: Checking arg -mP2OPT_hlo_level=3 compilers: Unknown arg -mP2OPT_hlo_level=3 compilers: Checking arg -mP2OPT_hlo compilers: Unknown arg -mP2OPT_hlo compilers: Checking arg -mP2OPT_hpo_rtt_control=0 compilers: Unknown arg -mP2OPT_hpo_rtt_control=0 compilers: Checking arg -mIPOPT_args_in_regs=0 compilers: Unknown arg -mIPOPT_args_in_regs=0 compilers: Checking arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Unknown arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Checking arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Unknown arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Checking arg -mPGOPTI_gen_threadsafe_level=0 compilers: Unknown arg -mPGOPTI_gen_threadsafe_level=0 compilers: Checking arg -mIPOPT_link compilers: Unknown arg -mIPOPT_link compilers: Checking arg -mIPOPT_ipo_activate compilers: Unknown arg -mIPOPT_ipo_activate compilers: Checking arg -mIPOPT_mo_activate compilers: Unknown arg -mIPOPT_mo_activate compilers: Checking arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/iccslisXjSMwN compilers: Unknown arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/iccslisXjSMwN compilers: Checking arg -mIPOPT_mo_global_data compilers: Unknown arg -mIPOPT_mo_global_data compilers: Checking arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/iccscriptVhGPE2 compilers: Unknown arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/iccscriptVhGPE2 compilers: Checking arg "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" compilers: Unknown arg -mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg "--eh-frame-hdr" compilers: Unknown arg --eh-frame-hdr compilers: Checking arg "-dynamic-linker" compilers: Unknown arg -dynamic-linker compilers: Checking arg "/lib64/ld-linux-k1om.so.2" compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg "-m" compilers: Unknown arg -m compilers: Checking arg "elf_k1om" compilers: Unknown arg elf_k1om compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Found library directory: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-o" compilers: Unknown arg -o compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Found library directory: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Found library : -lmkl_intel_lp64 compilers: Checking arg "-lmkl_intel_thread" compilers: Found library : -lmkl_intel_thread compilers: Checking arg "-lmkl_core" compilers: Found library : -lmkl_core compilers: Checking arg "-liomp5" compilers: Found library : -liomp5 compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg "-ldl" compilers: Checking arg "--enable-new-dtags" compilers: Unknown arg --enable-new-dtags compilers: Checking arg "-rpath" compilers: Found -rpath library: /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-rpath" compilers: Found -rpath library: /opt/intel/mpi-rt/4.1 compilers: Checking arg "-lmpigf" compilers: Checking arg "-lmpi" compilers: Checking arg "-lmpigi" compilers: Checking arg "-ldl" compilers: Checking arg "-lrt" compilers: Checking arg "-lpthread" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Checking arg "-lmkl_intel_thread" compilers: Checking arg "-lmkl_core" compilers: Checking arg "-liomp5" compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-limf" compilers: Found library : -limf compilers: Checking arg "-lsvml" compilers: Found library : -lsvml compilers: Checking arg "-lirng" compilers: Found library : -lirng compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lm" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lipgo" compilers: Found library : -lipgo compilers: Checking arg "-ldecimal" compilers: Found library : -ldecimal compilers: Checking arg "--as-needed" compilers: Unknown arg --as-needed compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lcilkrts" compilers: Found library : -lcilkrts compilers: Checking arg "-lstdc++" compilers: Found library : -lstdc++ compilers: Checking arg "--no-as-needed" compilers: Unknown arg --no-as-needed compilers: Checking arg "-lgcc" compilers: Skipping system library: -lgcc compilers: Checking arg "-lgcc_s" compilers: Found library : -lgcc_s compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc" compilers: Found library : -lirc compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lpthread" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lsvml" compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lc" compilers: Skipping system library: -lc compilers: Checking arg "-lgcc" compilers: Skipping system library: -lgcc compilers: Checking arg "-lgcc_s" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc_s" compilers: Found library : -lirc_s compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-ldl" compilers: Checking arg "-lc" compilers: Skipping system library: -lc compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Checking arg -mIPOPT_il_in_obj compilers: Unknown arg -mIPOPT_il_in_obj compilers: Checking arg -mIPOPT_ipo_activate_warn=FALSE compilers: Unknown arg -mIPOPT_ipo_activate_warn=FALSE compilers: Checking arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_iccgz48Kk.o compilers: Unknown arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_iccgz48Kk.o compilers: Checking arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/iccwarchBdQ8KK compilers: Unknown arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/iccwarchBdQ8KK compilers: Checking arg -mGLOB_linker_version=2.22.52.20120302 compilers: Unknown arg -mGLOB_linker_version=2.22.52.20120302 compilers: Checking arg -mGLOB_long_size_64 compilers: Unknown arg -mGLOB_long_size_64 compilers: Checking arg -mGLOB_routine_pointer_size_64 compilers: Unknown arg -mGLOB_routine_pointer_size_64 compilers: Checking arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icctempfilegFTbXZ compilers: Unknown arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icctempfilegFTbXZ compilers: Checking arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Unknown arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Checking arg -mGLOB_async_unwind_tables=TRUE compilers: Unknown arg -mGLOB_async_unwind_tables=TRUE compilers: Checking arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_iccgz48Kk.o compilers: Unknown arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_iccgz48Kk.o compilers: Checking arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Unknown arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Checking arg -mP1OPT_source_file_name=ipo_out.c compilers: Unknown arg -mP1OPT_source_file_name=ipo_out.c compilers: Checking arg -mP1OPT_max_rec_copy_size=256 compilers: Unknown arg -mP1OPT_max_rec_copy_size=256 compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -mIPOPT_object_files=T compilers: Unknown arg -mIPOPT_object_files=T compilers: Checking arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/iccalisrEZT0O compilers: Unknown arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/iccalisrEZT0O compilers: Checking arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/iccelisrLdP83 compilers: Unknown arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/iccelisrLdP83 compilers: Checking arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icceobjusGMgj compilers: Unknown arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icceobjusGMgj compilers: Checking arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/iccllisSfTLoy compilers: Unknown arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/iccllisSfTLoy compilers: Checking arg x86_64-k1om-linux-ld compilers: Unknown arg x86_64-k1om-linux-ld compilers: Checking arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Unknown arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-k1om.so.2 compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_k1om compilers: Unknown arg elf_k1om compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Found library directory: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Checking arg -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -rpath compilers: Already in rpathflags, skipping-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping-rpath compilers: Checking arg -lmpigf compilers: Checking arg -lmpi compilers: Checking arg -lmpigi compilers: Checking arg -ldl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Checking arg -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -limf compilers: Checking arg -lsvml compilers: Checking arg -lirng compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lm compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lipgo compilers: Checking arg -ldecimal compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lcilkrts compilers: Checking arg -lstdc++ compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lpthread compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc_s compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -ldl compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Libraries needed to link C code with another linker: ['-ldl', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-lmpigf', '-lmpi', '-lmpigi', '-lrt', '-lpthread', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-lmkl_intel_lp64', '-lmkl_intel_thread', '-lmkl_core', '-liomp5', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-limf', '-lsvml', '-lirng', '-lipgo', '-ldecimal', '-lcilkrts', '-lstdc++', '-lgcc_s', '-lirc', '-lirc_s', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic'] compilers: Check that C libraries can be used from Fortran Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1327) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1327) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD -MP Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 -MMD -MP /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Defined make macro "C_DEPFLAGS" to "-MMD -MP" Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD -MP Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -MMD -MP /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Defined make macro "CXX_DEPFLAGS" to "-MMD -MP" Popping language Cxx Pushing language FC Trying FC compiler flag -MMD -MP Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -MMD -MP /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F stdout: /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o : \ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Possible ERROR while running compiler: stdout: /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o : \ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.Fstderr: ifort: command line warning #10006: ignoring unknown option '-MP' Source: program main end Rejecting compiler flag -MMD -MP due to /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o : \ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.Fifort: command line warning #10006: ignoring unknown option '-MP' Rejected FC compiler flag -MMD -MP Trying FC compiler flag -MMD Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -MMD /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F stdout: /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o : \ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD because no dependency file (/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -xMMD /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Possible ERROR while running compiler: exit code 256 stderr: ifort: command line error: Unrecognized keyword 'MMD' for option '-x' Source: program main end Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to ifort: command line error: Unrecognized keyword 'MMD' for option '-x' PETSc Error: No output file produced Rejected FC compiler flag -xMMD Trying FC compiler flag -qmakedep=gcc Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -qmakedep=gcc /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Possible ERROR while running compiler: stderr: ifort: command line warning #10006: ignoring unknown option '-qmakedep=gcc' Source: program main end Rejecting compiler flag -qmakedep=gcc due to ifort: command line warning #10006: ignoring unknown option '-qmakedep=gcc' Rejected FC compiler flag -qmakedep=gcc Trying FC compiler flag -MD Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 -MD /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F stdout: /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o : \ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MD because no dependency file (/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.d) was generated Popping language FC ================================================================================ TEST checkRestrict from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:136) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:136) Check for the C/CXX restrict keyword Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc(5): error: expected a ";" float * restrict x;; ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc (code 2) Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:358) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:358) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:333) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:333) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:121) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:121) Check for C++ keyword: static inline Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:412) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:412) Determines the libraries needed to link with C++ Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl stdout: mpiicpc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved. Possible ERROR while running linker: stdout: mpiicpc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved.stderr: icpc version 15.0.0 (gcc version 4.7.0 compatibility) /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom -mP1OPT_version=15.0-intel64 -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=470 "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpigc4 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/icpcY48myAas_.s -mIPOPT_activate -mGLOB_em64t -mGLOB_k1om_objects=TRUE -mGLOB_product_id_code=0x22006d8e -mGLOB_extended_instructions=0x10000 -mCG_allow_xmm=FALSE -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mP2OPT_disam_type_based_disam=2 -mP2OPT_disam_assume_ansi_c -mP2OPT_checked_disam_ansi_alias=TRUE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=0 -mP2OPT_offload_unique_var_string=icpc893961474OmnDOh -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_link -mIPOPT_ipo_activate -mIPOPT_mo_activate -mIPOPT_source_files_list=/global/scratch2/sd/madams/icpcsliswzLSPx -mIPOPT_mo_global_data -mIPOPT_link_script_file=/global/scratch2/sd/madams/icpcscriptIiI6b4 "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" "--eh-frame-hdr" "-dynamic-linker" "/lib64/ld-linux-k1om.so.2" "-m" "elf_k1om" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-o" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" "-ldl" "-lmpigf" "-lmpi" "-lmpigi" "-lrt" "-lpthread" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "-rpath" "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-rpath" "/opt/intel/mpi-rt/4.1" "-limf" "-lsvml" "-lirng" "-lipgo" "-ldecimal" "-lcilkrts" "-lstdc++" "-lgcc_s" "-lirc" "-lirc_s" "-ldl" "--enable-new-dtags" "-rpath" "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-rpath" "/opt/intel/mpi-rt/4.1" "-lmpigc4" "-lmpigf" "-lmpi" "-lmpigi" "-ldl" "-lrt" "-lpthread" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "-Bstatic" "-limf" "-lsvml" "-lirng" "-Bdynamic" "-lm" "-Bstatic" "-lipgo" "-ldecimal" "--as-needed" "-Bdynamic" "-lcilkrts" "--no-as-needed" "-lstdc++" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc" "-Bdynamic" "-lpthread" "-Bstatic" "-lsvml" "-Bdynamic" "-lc" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc_s" "-Bdynamic" "-ldl" "-lc" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" -mIPOPT_il_in_obj -mIPOPT_ipo_activate_warn=FALSE -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/icpcwarcho2H8TI -mGLOB_linker_version=2.22.52.20120302 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icpctempfilepY0wkf -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE -mP1OPT_source_file_name=ipo_out.c -mP1OPT_max_rec_copy_size=256 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -mIPOPT_object_files=T -mIPOPT_assembly_files=/global/scratch2/sd/madams/icpcalisvnWups -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/icpcelisgi4vLY -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icpceobjCwqA7u -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/icpcllisrkYHt1 x86_64-k1om-linux-ld --sysroot=/usr/linux-k1om-4.7/linux-k1om /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-k1om.so.2 -m elf_k1om -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -rpath /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -rpath /opt/intel/mpi-rt/4.1 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl --enable-new-dtags -rpath /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -rpath /opt/intel/mpi-rt/4.1 -lmpigc4 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic -Bstatic -limf -lsvml -lirng -Bdynamic -lm -Bstatic -lipgo -ldecimal --as-needed -Bdynamic -lcilkrts --no-as-needed -lstdc++ -lgcc -lgcc_s -Bstatic -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language Cxx compilers: Checking arg mpiicpc compilers: Unknown arg mpiicpc compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg Intel(R) compilers: Unknown arg Intel(R) compilers: Checking arg MPI compilers: Unknown arg MPI compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg 4.1 compilers: Unknown arg 4.1 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg Linux* compilers: Unknown arg Linux* compilers: Checking arg Copyright(C) compilers: Unknown arg Copyright(C) compilers: Checking arg 2003-2014, compilers: Unknown arg 2003-2014, compilers: Checking arg Intel compilers: Unknown arg Intel compilers: Checking arg Corporation. compilers: Unknown arg Corporation. compilers: Checking arg All compilers: Unknown arg All compilers: Checking arg rights compilers: Unknown arg rights compilers: Checking arg reserved. compilers: Unknown arg reserved. compilers: Checking arg icpc compilers: Unknown arg icpc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 15.0.0 compilers: Unknown arg 15.0.0 compilers: Checking arg (gcc compilers: Unknown arg (gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 4.7.0 compilers: Unknown arg 4.7.0 compilers: Checking arg compatibility) compilers: Unknown arg compatibility) compilers: Checking arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom compilers: Unknown arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mcpcom compilers: Checking arg -mP1OPT_version=15.0-intel64 compilers: Unknown arg -mP1OPT_version=15.0-intel64 compilers: Checking arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Unknown arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Checking arg -mP1OPT_print_version=FALSE compilers: Unknown arg -mP1OPT_print_version=FALSE compilers: Checking arg -mCG_use_gas_got_workaround=F compilers: Unknown arg -mCG_use_gas_got_workaround=F compilers: Checking arg -mP2OPT_align_option_used=TRUE compilers: Unknown arg -mP2OPT_align_option_used=TRUE compilers: Checking arg -mGLOB_gcc_version=470 compilers: Unknown arg -mGLOB_gcc_version=470 compilers: Checking arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Unknown arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -mmic compilers: Unknown arg -mmic compilers: Checking arg -mkl compilers: Unknown arg -mkl compilers: Checking arg -fp-model compilers: Unknown arg -fp-model compilers: Checking arg precise compilers: Unknown arg precise compilers: Checking arg -O3 compilers: Unknown arg -O3 compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Found library directory: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -lmpigf compilers: Found library: -lmpigf Library already in C list so skipping in C++ compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -lmpigi compilers: Found library: -lmpigi Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in C++ compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -lmkl_intel_lp64 compilers: Found library: -lmkl_intel_lp64 Library already in C list so skipping in C++ compilers: Checking arg -lmkl_intel_thread compilers: Found library: -lmkl_intel_thread Library already in C list so skipping in C++ compilers: Checking arg -lmkl_core compilers: Found library: -lmkl_core Library already in C list so skipping in C++ compilers: Checking arg -liomp5 compilers: Found library: -liomp5 Library already in C list so skipping in C++ compilers: Checking arg -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Unknown arg -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Wl,-rpath,/opt/intel/mpi-rt/4.1 compilers: Unknown arg -Wl,-rpath,/opt/intel/mpi-rt/4.1 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -limf compilers: Found library: -limf Library already in C list so skipping in C++ compilers: Checking arg -lsvml compilers: Found library: -lsvml Library already in C list so skipping in C++ compilers: Checking arg -lirng compilers: Found library: -lirng Library already in C list so skipping in C++ compilers: Checking arg -lipgo compilers: Found library: -lipgo Library already in C list so skipping in C++ compilers: Checking arg -ldecimal compilers: Found library: -ldecimal Library already in C list so skipping in C++ compilers: Checking arg -lcilkrts compilers: Found library: -lcilkrts Library already in C list so skipping in C++ compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -lirc compilers: Found library: -lirc Library already in C list so skipping in C++ compilers: Checking arg -lirc_s compilers: Found library: -lirc_s Library already in C list so skipping in C++ compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -ldl compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Unknown arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /opt/intel/mpi-rt/4.1 compilers: Unknown arg /opt/intel/mpi-rt/4.1 compilers: Checking arg -lmpigc4 compilers: Found library: -lmpigc4 compilers: Checking arg -lmpigf compilers: Checking arg -lmpi compilers: Checking arg -lmpigi compilers: Checking arg -ldl compilers: Checking arg -lrt compilers: Checking arg -lpthread" compilers: Checking arg -mGLOB_cxx_limited_range=FALSE compilers: Unknown arg -mGLOB_cxx_limited_range=FALSE compilers: Checking arg -mCG_extend_parms=FALSE compilers: Unknown arg -mCG_extend_parms=FALSE compilers: Checking arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Unknown arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Checking arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/icpcY48myAas_.s compilers: Unknown arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/icpcY48myAas_.s compilers: Checking arg -mIPOPT_activate compilers: Unknown arg -mIPOPT_activate compilers: Checking arg -mGLOB_em64t compilers: Unknown arg -mGLOB_em64t compilers: Checking arg -mGLOB_k1om_objects=TRUE compilers: Unknown arg -mGLOB_k1om_objects=TRUE compilers: Checking arg -mGLOB_product_id_code=0x22006d8e compilers: Unknown arg -mGLOB_product_id_code=0x22006d8e compilers: Checking arg -mGLOB_extended_instructions=0x10000 compilers: Unknown arg -mGLOB_extended_instructions=0x10000 compilers: Checking arg -mCG_allow_xmm=FALSE compilers: Unknown arg -mCG_allow_xmm=FALSE compilers: Checking arg -mP3OPT_use_mspp_call_convention compilers: Unknown arg -mP3OPT_use_mspp_call_convention compilers: Checking arg -mP2OPT_subs_out_of_bound=FALSE compilers: Unknown arg -mP2OPT_subs_out_of_bound=FALSE compilers: Checking arg -mP2OPT_disam_type_based_disam=2 compilers: Unknown arg -mP2OPT_disam_type_based_disam=2 compilers: Checking arg -mP2OPT_disam_assume_ansi_c compilers: Unknown arg -mP2OPT_disam_assume_ansi_c compilers: Checking arg -mP2OPT_checked_disam_ansi_alias=TRUE compilers: Unknown arg -mP2OPT_checked_disam_ansi_alias=TRUE compilers: Checking arg -mGLOB_ansi_alias compilers: Unknown arg -mGLOB_ansi_alias compilers: Checking arg -mPGOPTI_value_profile_use=T compilers: Unknown arg -mPGOPTI_value_profile_use=T compilers: Checking arg -mGLOB_opt_report_use_source_name compilers: Unknown arg -mGLOB_opt_report_use_source_name compilers: Checking arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Unknown arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Checking arg -mP2OPT_il0_array_sections=TRUE compilers: Unknown arg -mP2OPT_il0_array_sections=TRUE compilers: Checking arg -mGLOB_offload_mode=0 compilers: Unknown arg -mGLOB_offload_mode=0 compilers: Checking arg -mP2OPT_offload_unique_var_string=icpc893961474OmnDOh compilers: Unknown arg -mP2OPT_offload_unique_var_string=icpc893961474OmnDOh compilers: Checking arg -mGLOB_opt_level=3 compilers: Unknown arg -mGLOB_opt_level=3 compilers: Checking arg -mP2OPT_hlo_level=3 compilers: Unknown arg -mP2OPT_hlo_level=3 compilers: Checking arg -mP2OPT_hlo compilers: Unknown arg -mP2OPT_hlo compilers: Checking arg -mP2OPT_hpo_rtt_control=0 compilers: Unknown arg -mP2OPT_hpo_rtt_control=0 compilers: Checking arg -mIPOPT_args_in_regs=0 compilers: Unknown arg -mIPOPT_args_in_regs=0 compilers: Checking arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Unknown arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Checking arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Unknown arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Checking arg -mPGOPTI_gen_threadsafe_level=0 compilers: Unknown arg -mPGOPTI_gen_threadsafe_level=0 compilers: Checking arg -mIPOPT_link compilers: Unknown arg -mIPOPT_link compilers: Checking arg -mIPOPT_ipo_activate compilers: Unknown arg -mIPOPT_ipo_activate compilers: Checking arg -mIPOPT_mo_activate compilers: Unknown arg -mIPOPT_mo_activate compilers: Checking arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/icpcsliswzLSPx compilers: Unknown arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/icpcsliswzLSPx compilers: Checking arg -mIPOPT_mo_global_data compilers: Unknown arg -mIPOPT_mo_global_data compilers: Checking arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/icpcscriptIiI6b4 compilers: Unknown arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/icpcscriptIiI6b4 compilers: Checking arg "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" compilers: Unknown arg -mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg "--eh-frame-hdr" compilers: Unknown arg --eh-frame-hdr compilers: Checking arg "-dynamic-linker" compilers: Unknown arg -dynamic-linker compilers: Checking arg "/lib64/ld-linux-k1om.so.2" compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg "-m" compilers: Unknown arg -m compilers: Checking arg "elf_k1om" compilers: Unknown arg elf_k1om compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Checking arg "-o" compilers: Unknown arg -o compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Checking arg "-lmkl_intel_thread" compilers: Checking arg "-lmkl_core" compilers: Checking arg "-liomp5" compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg "-ldl" compilers: Checking arg "-lmpigf" compilers: Checking arg "-lmpi" compilers: Checking arg "-lmpigi" compilers: Checking arg "-lrt" compilers: Checking arg "-lpthread" compilers: Checking arg "-lmkl_intel_lp64" compilers: Checking arg "-lmkl_intel_thread" compilers: Checking arg "-lmkl_core" compilers: Checking arg "-liomp5" compilers: Checking arg "-rpath" compilers: Found -rpath library: /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-rpath" compilers: Found -rpath library: /opt/intel/mpi-rt/4.1 compilers: Checking arg "-limf" compilers: Checking arg "-lsvml" compilers: Checking arg "-lirng" compilers: Checking arg "-lipgo" compilers: Checking arg "-ldecimal" compilers: Checking arg "-lcilkrts" compilers: Checking arg "-lstdc++" compilers: Checking arg "-lgcc_s" compilers: Checking arg "-lirc" compilers: Checking arg "-lirc_s" compilers: Checking arg "-ldl" compilers: Checking arg "--enable-new-dtags" compilers: Unknown arg --enable-new-dtags compilers: Checking arg "-rpath" compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg "-rpath" compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg "-lmpigc4" compilers: Checking arg "-lmpigf" compilers: Checking arg "-lmpi" compilers: Checking arg "-lmpigi" compilers: Checking arg "-ldl" compilers: Checking arg "-lrt" compilers: Checking arg "-lpthread" compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Checking arg "-lmkl_intel_thread" compilers: Checking arg "-lmkl_core" compilers: Checking arg "-liomp5" compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-limf" compilers: Checking arg "-lsvml" compilers: Checking arg "-lirng" compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lm" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lipgo" compilers: Checking arg "-ldecimal" compilers: Checking arg "--as-needed" compilers: Unknown arg --as-needed compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lcilkrts" compilers: Checking arg "--no-as-needed" compilers: Unknown arg --no-as-needed compilers: Checking arg "-lstdc++" compilers: Checking arg "-lgcc" compilers: Skipping system library: -lgcc compilers: Checking arg "-lgcc_s" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc" compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lpthread" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lsvml" compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lc" compilers: Skipping system library: -lc compilers: Checking arg "-lgcc" compilers: Skipping system library: -lgcc compilers: Checking arg "-lgcc_s" compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc_s" compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-ldl" compilers: Checking arg "-lc" compilers: Skipping system library: -lc compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Checking arg -mIPOPT_il_in_obj compilers: Unknown arg -mIPOPT_il_in_obj compilers: Checking arg -mIPOPT_ipo_activate_warn=FALSE compilers: Unknown arg -mIPOPT_ipo_activate_warn=FALSE compilers: Checking arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o compilers: Unknown arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o compilers: Checking arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/icpcwarcho2H8TI compilers: Unknown arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/icpcwarcho2H8TI compilers: Checking arg -mGLOB_linker_version=2.22.52.20120302 compilers: Unknown arg -mGLOB_linker_version=2.22.52.20120302 compilers: Checking arg -mGLOB_long_size_64 compilers: Unknown arg -mGLOB_long_size_64 compilers: Checking arg -mGLOB_routine_pointer_size_64 compilers: Unknown arg -mGLOB_routine_pointer_size_64 compilers: Checking arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icpctempfilepY0wkf compilers: Unknown arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/icpctempfilepY0wkf compilers: Checking arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Unknown arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Checking arg -mGLOB_async_unwind_tables=TRUE compilers: Unknown arg -mGLOB_async_unwind_tables=TRUE compilers: Checking arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o compilers: Unknown arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_icpcL1gCHp.o compilers: Checking arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Unknown arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Checking arg -mP1OPT_source_file_name=ipo_out.c compilers: Unknown arg -mP1OPT_source_file_name=ipo_out.c compilers: Checking arg -mP1OPT_max_rec_copy_size=256 compilers: Unknown arg -mP1OPT_max_rec_copy_size=256 compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -mIPOPT_object_files=T compilers: Unknown arg -mIPOPT_object_files=T compilers: Checking arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/icpcalisvnWups compilers: Unknown arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/icpcalisvnWups compilers: Checking arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/icpcelisgi4vLY compilers: Unknown arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/icpcelisgi4vLY compilers: Checking arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icpceobjCwqA7u compilers: Unknown arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/icpceobjCwqA7u compilers: Checking arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/icpcllisrkYHt1 compilers: Unknown arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/icpcllisrkYHt1 compilers: Checking arg x86_64-k1om-linux-ld compilers: Unknown arg x86_64-k1om-linux-ld compilers: Checking arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Unknown arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-k1om.so.2 compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_k1om compilers: Unknown arg elf_k1om compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Checking arg -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Checking arg -lmpigf compilers: Checking arg -lmpi compilers: Checking arg -lmpigi compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Checking arg -liomp5 compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -limf compilers: Checking arg -lsvml compilers: Checking arg -lirng compilers: Checking arg -lipgo compilers: Checking arg -ldecimal compilers: Checking arg -lcilkrts compilers: Checking arg -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lirc compilers: Checking arg -lirc_s compilers: Checking arg -ldl compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -lmpigc4 compilers: Checking arg -lmpigf compilers: Checking arg -lmpi compilers: Checking arg -lmpigi compilers: Checking arg -ldl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Checking arg -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -limf compilers: Checking arg -lsvml compilers: Checking arg -lirng compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lm compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lipgo compilers: Checking arg -ldecimal compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lcilkrts compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg -lstdc++ compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lpthread compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc_s compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -ldl compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Checking arg x86_64-k1om-linux-ld: compilers: Unknown arg x86_64-k1om-linux-ld: compilers: Checking arg warning: compilers: Unknown arg warning: compilers: Checking arg libintlc.so.5, compilers: Unknown arg libintlc.so.5, compilers: Checking arg needed compilers: Unknown arg needed compilers: Checking arg by compilers: Unknown arg by compilers: Checking arg /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, compilers: Unknown arg /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, compilers: Checking arg not compilers: Unknown arg not compilers: Checking arg found compilers: Unknown arg found compilers: Checking arg (try compilers: Unknown arg (try compilers: Checking arg using compilers: Unknown arg using compilers: Checking arg -rpath compilers: Found -rpath library: /chos/global/u2/m/madams/petsc/or compilers: Checking arg -rpath-link) compilers: Unknown arg -rpath-link) compilers: Libraries needed to link Cxx code with another linker: ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-lmpigc4', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] compilers: Check that Cxx libraries can be used from C Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmpigc4 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmpigc4 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC ================================================================================ TEST checkCxx11 from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:373) TESTING: checkCxx11 from config.compilers(config/BuildSystem/config/compilers.py:373) Determine the option needed to support the C++11 dialect We auto-detect C++11 if the compiler supports it without options, otherwise we require with-cxx-dialect=C++11 to try adding flags to support it. Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: In file included from /usr/linux-k1om-4.7/linux-k1om/../x86_64-k1om-linux/include/c++/4.7.0/random(35), from /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(4): /usr/linux-k1om-4.7/linux-k1om/../x86_64-k1om-linux/include/c++/4.7.0/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the upcoming ISO C++ standard, C++0x. This support is currently experimental, and must be enabled with the -std=c++0x or -std=gnu++0x compiler options. #error This file requires compiler and library support for the upcoming \ ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(5): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(5): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(16): warning #12: parsing restarts here after previous syntax error /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(16): error: expected a ";" compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc (code 2) Source: #include "confdefs.h" #include "conffix.h" #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to In file included from /usr/linux-k1om-4.7/linux-k1om/../x86_64-k1om-linux/include/c++/4.7.0/random(35), from /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(4): /usr/linux-k1om-4.7/linux-k1om/../x86_64-k1om-linux/include/c++/4.7.0/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the upcoming ISO C++ standard, C++0x. This support is currently experimental, and must be enabled with the -std=c++0x or -std=gnu++0x compiler options. #error This file requires compiler and library support for the upcoming \ ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(5): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(5): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(16): warning #12: parsing restarts here after previous syntax error /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc(16): error: expected a ";" compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc (code 2) PETSc Error: No output file produced Popping language Cxx ================================================================================ TEST checkFortranTypeSizes from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:571) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:571) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:630) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:630) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confc.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:667) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:667) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confc.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o: In function `MAIN__': /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F:(.text+0x1e): undefined reference to `d1_chk_' Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:677) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:677) Determine if Fortran handles preprocessing properly Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:698) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:698) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 -DTesting /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:715) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:715) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC Executing: mpiifort -V Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl stdout: mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved. Possible ERROR while running linker: stdout: mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved.stderr: ifort version 15.0.0 /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/fortcom -mP1OPT_version=15.0-intel64 -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=470 "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -v -mmic -mkl -fp-model precise -O3 -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/ifortOq8EWras_.s -mIPOPT_activate -mGLOB_em64t -mGLOB_k1om_objects=TRUE -mGLOB_product_id_code=0x22006d8f -mGLOB_extended_instructions=0x10000 -mCG_allow_xmm=FALSE -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=0 -mP2OPT_offload_unique_var_string=ifort1137674807plrWkf -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_link -mIPOPT_ipo_activate -mIPOPT_mo_activate -mIPOPT_source_files_list=/global/scratch2/sd/madams/ifortslis3hTUOH -mIPOPT_mo_global_data -mIPOPT_link_script_file=/global/scratch2/sd/madams/ifortscriptVX7KSz "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" "--eh-frame-hdr" "-dynamic-linker" "/lib64/ld-linux-k1om.so.2" "-m" "elf_k1om" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-o" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/lib64" "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" "-ldl" "-lmpigf" "-lmpi" "-lmpigi" "-lrt" "-lpthread" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "-rpath" "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-rpath" "/opt/intel/mpi-rt/4.1" "-limf" "-lsvml" "-lirng" "-lipgo" "-ldecimal" "-lcilkrts" "-lstdc++" "-lgcc_s" "-lirc" "-lirc_s" "-ldl" "--enable-new-dtags" "-rpath" "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" "-rpath" "/opt/intel/mpi-rt/4.1" "-lmpigf" "-lmpi" "-lmpigi" "-ldl" "-lrt" "-lpthread" "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" "--start-group" "-lmkl_intel_lp64" "-lmkl_intel_thread" "-lmkl_core" "-liomp5" "--end-group" "-Bdynamic" "-Bstatic" "-lifport" "-lifcore" "-limf" "-lsvml" "-Bdynamic" "-lm" "-Bstatic" "-lipgo" "-lirc" "-Bdynamic" "-lpthread" "-Bstatic" "-lsvml" "-Bdynamic" "-lc" "-lgcc" "-lgcc_s" "-Bstatic" "-lirc_s" "-Bdynamic" "-ldl" "-lc" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" -mIPOPT_il_in_obj -mIPOPT_ipo_activate_warn=FALSE -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_ifortkwJTst.o -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/ifortwarchjcBznO -mGLOB_linker_version=2.22.52.20120302 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/iforttempfileK9oNuG -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_ifortkwJTst.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE -mP1OPT_source_file_name=ipo_out.f -mP2OPT_symtab_type_copy=true -mP1OPT_max_rec_copy_size=256 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -mIPOPT_object_files=T -mIPOPT_assembly_files=/global/scratch2/sd/madams/ifortalisQO02zd -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/ifortelisHofHD5 -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/iforteobjFVjoHX -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/ifortllisCqW7KP x86_64-k1om-linux-ld --sysroot=/usr/linux-k1om-4.7/linux-k1om /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-k1om.so.2 -m elf_k1om -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -rpath /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -rpath /opt/intel/mpi-rt/4.1 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl --enable-new-dtags -rpath /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -rpath /opt/intel/mpi-rt/4.1 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic --start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 --end-group -Bdynamic -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC compilers: Checking arg mpiifort compilers: Unknown arg mpiifort compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg Intel(R) compilers: Unknown arg Intel(R) compilers: Checking arg MPI compilers: Unknown arg MPI compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg 4.1 compilers: Unknown arg 4.1 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg Linux* compilers: Unknown arg Linux* compilers: Checking arg Copyright(C) compilers: Unknown arg Copyright(C) compilers: Checking arg 2003-2014, compilers: Unknown arg 2003-2014, compilers: Checking arg Intel compilers: Unknown arg Intel compilers: Checking arg Corporation. compilers: Unknown arg Corporation. compilers: Checking arg All compilers: Unknown arg All compilers: Checking arg rights compilers: Unknown arg rights compilers: Checking arg reserved. compilers: Unknown arg reserved. compilers: Checking arg ifort compilers: Unknown arg ifort compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 15.0.0 compilers: Unknown arg 15.0.0 compilers: Checking arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/fortcom compilers: Unknown arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/fortcom compilers: Checking arg -mP1OPT_version=15.0-intel64 compilers: Unknown arg -mP1OPT_version=15.0-intel64 compilers: Checking arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Unknown arg -mGLOB_diag_file=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.diag compilers: Checking arg -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 compilers: Unknown arg -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 compilers: Checking arg -mP2OPT_static_promotion compilers: Unknown arg -mP2OPT_static_promotion compilers: Checking arg -mP1OPT_print_version=FALSE compilers: Unknown arg -mP1OPT_print_version=FALSE compilers: Checking arg -mCG_use_gas_got_workaround=F compilers: Unknown arg -mCG_use_gas_got_workaround=F compilers: Checking arg -mP2OPT_align_option_used=TRUE compilers: Unknown arg -mP2OPT_align_option_used=TRUE compilers: Checking arg -mGLOB_gcc_version=470 compilers: Unknown arg -mGLOB_gcc_version=470 compilers: Checking arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Unknown arg "-mGLOB_options_string=-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Checking arg -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Found include directory: /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -mmic compilers: Unknown arg -mmic compilers: Checking arg -mkl compilers: Unknown arg -mkl compilers: Checking arg -fp-model compilers: Unknown arg -fp-model compilers: Checking arg precise compilers: Unknown arg precise compilers: Checking arg -O3 compilers: Unknown arg -O3 compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in Fortran compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Found library directory: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -lmpigf compilers: Found library: -lmpigf Library already in C list so skipping in Fortran compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in Fortran compilers: Checking arg -lmpigi compilers: Found library: -lmpigi Library already in C list so skipping in Fortran compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in Fortran compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in Fortran compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Found library directory: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Found library directory: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Found library directory: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Found library directory: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -lmkl_intel_lp64 compilers: Found library: -lmkl_intel_lp64 Library already in C list so skipping in Fortran compilers: Checking arg -lmkl_intel_thread compilers: Found library: -lmkl_intel_thread Library already in C list so skipping in Fortran compilers: Checking arg -lmkl_core compilers: Found library: -lmkl_core Library already in C list so skipping in Fortran compilers: Checking arg -liomp5 compilers: Found library: -liomp5 Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Unknown arg -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Wl,-rpath,/opt/intel/mpi-rt/4.1 compilers: Unknown arg -Wl,-rpath,/opt/intel/mpi-rt/4.1 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -limf compilers: Found library: -limf Library already in C list so skipping in Fortran compilers: Checking arg -lsvml compilers: Found library: -lsvml Library already in C list so skipping in Fortran compilers: Checking arg -lirng compilers: Found library: -lirng Library already in C list so skipping in Fortran compilers: Checking arg -lipgo compilers: Found library: -lipgo Library already in C list so skipping in Fortran compilers: Checking arg -ldecimal compilers: Found library: -ldecimal Library already in C list so skipping in Fortran compilers: Checking arg -lcilkrts compilers: Found library: -lcilkrts Library already in C list so skipping in Fortran compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in Fortran compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in Fortran compilers: Checking arg -lirc compilers: Found library: -lirc Library already in C list so skipping in Fortran compilers: Checking arg -lirc_s compilers: Found library: -lirc_s Library already in C list so skipping in Fortran compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Unknown arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -Xlinker compilers: Unknown arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg /opt/intel/mpi-rt/4.1 compilers: Unknown arg /opt/intel/mpi-rt/4.1 compilers: Checking arg -lmpigf compilers: Already in lflags: -lmpigf compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lmpigi compilers: Already in lflags: -lmpigi compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg -mGLOB_cxx_limited_range=FALSE compilers: Unknown arg -mGLOB_cxx_limited_range=FALSE compilers: Checking arg -mCG_extend_parms=FALSE compilers: Unknown arg -mCG_extend_parms=FALSE compilers: Checking arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Unknown arg -mGLOB_compiler_bin_directory=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic compilers: Checking arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/ifortOq8EWras_.s compilers: Unknown arg -mGLOB_as_output_backup_file_name=/global/scratch2/sd/madams/ifortOq8EWras_.s compilers: Checking arg -mIPOPT_activate compilers: Unknown arg -mIPOPT_activate compilers: Checking arg -mGLOB_em64t compilers: Unknown arg -mGLOB_em64t compilers: Checking arg -mGLOB_k1om_objects=TRUE compilers: Unknown arg -mGLOB_k1om_objects=TRUE compilers: Checking arg -mGLOB_product_id_code=0x22006d8f compilers: Unknown arg -mGLOB_product_id_code=0x22006d8f compilers: Checking arg -mGLOB_extended_instructions=0x10000 compilers: Unknown arg -mGLOB_extended_instructions=0x10000 compilers: Checking arg -mCG_allow_xmm=FALSE compilers: Unknown arg -mCG_allow_xmm=FALSE compilers: Checking arg -mP3OPT_use_mspp_call_convention compilers: Unknown arg -mP3OPT_use_mspp_call_convention compilers: Checking arg -mP2OPT_subs_out_of_bound=FALSE compilers: Unknown arg -mP2OPT_subs_out_of_bound=FALSE compilers: Checking arg -mGLOB_ansi_alias compilers: Unknown arg -mGLOB_ansi_alias compilers: Checking arg -mPGOPTI_value_profile_use=T compilers: Unknown arg -mPGOPTI_value_profile_use=T compilers: Checking arg -mGLOB_opt_report_use_source_name compilers: Unknown arg -mGLOB_opt_report_use_source_name compilers: Checking arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Unknown arg -mGLOB_opt_report_per_object_dir=/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers compilers: Checking arg -mP2OPT_il0_array_sections=TRUE compilers: Unknown arg -mP2OPT_il0_array_sections=TRUE compilers: Checking arg -mGLOB_offload_mode=0 compilers: Unknown arg -mGLOB_offload_mode=0 compilers: Checking arg -mP2OPT_offload_unique_var_string=ifort1137674807plrWkf compilers: Unknown arg -mP2OPT_offload_unique_var_string=ifort1137674807plrWkf compilers: Checking arg -mGLOB_opt_level=3 compilers: Unknown arg -mGLOB_opt_level=3 compilers: Checking arg -mP2OPT_hlo_level=3 compilers: Unknown arg -mP2OPT_hlo_level=3 compilers: Checking arg -mP2OPT_hlo compilers: Unknown arg -mP2OPT_hlo compilers: Checking arg -mP2OPT_hpo_rtt_control=0 compilers: Unknown arg -mP2OPT_hpo_rtt_control=0 compilers: Checking arg -mIPOPT_args_in_regs=0 compilers: Unknown arg -mIPOPT_args_in_regs=0 compilers: Checking arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Unknown arg -mP2OPT_disam_assume_nonstd_intent_in=FALSE compilers: Checking arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Unknown arg -mGLOB_imf_mapping_library=/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/libiml_attr.so compilers: Checking arg -mPGOPTI_gen_threadsafe_level=0 compilers: Unknown arg -mPGOPTI_gen_threadsafe_level=0 compilers: Checking arg -mIPOPT_link compilers: Unknown arg -mIPOPT_link compilers: Checking arg -mIPOPT_ipo_activate compilers: Unknown arg -mIPOPT_ipo_activate compilers: Checking arg -mIPOPT_mo_activate compilers: Unknown arg -mIPOPT_mo_activate compilers: Checking arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/ifortslis3hTUOH compilers: Unknown arg -mIPOPT_source_files_list=/global/scratch2/sd/madams/ifortslis3hTUOH compilers: Checking arg -mIPOPT_mo_global_data compilers: Unknown arg -mIPOPT_mo_global_data compilers: Checking arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/ifortscriptVX7KSz compilers: Unknown arg -mIPOPT_link_script_file=/global/scratch2/sd/madams/ifortscriptVX7KSz compilers: Checking arg "-mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om" compilers: Unknown arg -mIPOPT_cmdline_link="--sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg "--eh-frame-hdr" compilers: Unknown arg --eh-frame-hdr compilers: Checking arg "-dynamic-linker" compilers: Unknown arg -dynamic-linker compilers: Checking arg "/lib64/ld-linux-k1om.so.2" compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg "-m" compilers: Unknown arg -m compilers: Checking arg "elf_k1om" compilers: Unknown arg elf_k1om compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg "-L/usr/linux-k1om-4.7/lib/gcc" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-o" compilers: Unknown arg -o compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o" compilers: Unknown arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg "-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic" compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg "-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64" compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg "-lmkl_intel_thread" compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg "-lmkl_core" compilers: Already in lflags: -lmkl_core compilers: Checking arg "-liomp5" compilers: Already in lflags: -liomp5 compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o" compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "-lmpigf" compilers: Already in lflags: -lmpigf compilers: Checking arg "-lmpi" compilers: Already in lflags: -lmpi compilers: Checking arg "-lmpigi" compilers: Already in lflags: -lmpigi compilers: Checking arg "-lrt" compilers: Already in lflags: -lrt compilers: Checking arg "-lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg "-lmkl_intel_lp64" compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg "-lmkl_intel_thread" compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg "-lmkl_core" compilers: Already in lflags: -lmkl_core compilers: Checking arg "-liomp5" compilers: Already in lflags: -liomp5 compilers: Checking arg "-rpath" compilers: Found -rpath library: /global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg "-rpath" compilers: Found -rpath library: /opt/intel/mpi-rt/4.1 compilers: Checking arg "-limf" compilers: Already in lflags: -limf compilers: Checking arg "-lsvml" compilers: Already in lflags: -lsvml compilers: Checking arg "-lirng" compilers: Already in lflags: -lirng compilers: Checking arg "-lipgo" compilers: Already in lflags: -lipgo compilers: Checking arg "-ldecimal" compilers: Already in lflags: -ldecimal compilers: Checking arg "-lcilkrts" compilers: Already in lflags: -lcilkrts compilers: Checking arg "-lstdc++" compilers: Already in lflags: -lstdc++ compilers: Checking arg "-lgcc_s" compilers: Already in lflags: -lgcc_s compilers: Checking arg "-lirc" compilers: Already in lflags: -lirc compilers: Checking arg "-lirc_s" compilers: Already in lflags: -lirc_s compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "--enable-new-dtags" compilers: Unknown arg --enable-new-dtags compilers: Checking arg "-rpath" compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg "-rpath" compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg "-lmpigf" compilers: Already in lflags: -lmpigf compilers: Checking arg "-lmpi" compilers: Already in lflags: -lmpi compilers: Checking arg "-lmpigi" compilers: Already in lflags: -lmpigi compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "-lrt" compilers: Already in lflags: -lrt compilers: Checking arg "-lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg "-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic" compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg "--start-group" compilers: Unknown arg --start-group compilers: Checking arg "-lmkl_intel_lp64" compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg "-lmkl_intel_thread" compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg "-lmkl_core" compilers: Already in lflags: -lmkl_core compilers: Checking arg "-liomp5" compilers: Already in lflags: -liomp5 compilers: Checking arg "--end-group" compilers: Unknown arg --end-group compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lifport" compilers: Found library: -lifport compilers: Checking arg "-lifcore" compilers: Found library: -lifcore compilers: Checking arg "-limf" compilers: Already in lflags: -limf compilers: Checking arg "-lsvml" compilers: Already in lflags: -lsvml compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lm" compilers: Found library: -lm compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lipgo" compilers: Already in lflags: -lipgo compilers: Checking arg "-lirc" compilers: Already in lflags: -lirc compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lpthread" compilers: Already in lflags: -lpthread compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lsvml" compilers: Already in lflags: -lsvml compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-lc" compilers: Found system library therefor skipping: -lc compilers: Checking arg "-lgcc" compilers: Found system library therefor skipping: -lgcc compilers: Checking arg "-lgcc_s" compilers: Already in lflags: -lgcc_s compilers: Checking arg "-Bstatic" compilers: Unknown arg -Bstatic compilers: Checking arg "-lirc_s" compilers: Already in lflags: -lirc_s compilers: Checking arg "-Bdynamic" compilers: Unknown arg -Bdynamic compilers: Checking arg "-ldl" compilers: Already in lflags: -ldl compilers: Checking arg "-lc" compilers: Found system library therefor skipping: -lc compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg "/usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o"" compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Checking arg -mIPOPT_il_in_obj compilers: Unknown arg -mIPOPT_il_in_obj compilers: Checking arg -mIPOPT_ipo_activate_warn=FALSE compilers: Unknown arg -mIPOPT_ipo_activate_warn=FALSE compilers: Checking arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_ifortkwJTst.o compilers: Unknown arg -mIPOPT_obj_output_file_name=/global/scratch2/sd/madams/ipo_ifortkwJTst.o compilers: Checking arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/ifortwarchjcBznO compilers: Unknown arg -mIPOPT_whole_archive_fixup_file_name=/global/scratch2/sd/madams/ifortwarchjcBznO compilers: Checking arg -mGLOB_linker_version=2.22.52.20120302 compilers: Unknown arg -mGLOB_linker_version=2.22.52.20120302 compilers: Checking arg -mGLOB_long_size_64 compilers: Unknown arg -mGLOB_long_size_64 compilers: Checking arg -mGLOB_routine_pointer_size_64 compilers: Unknown arg -mGLOB_routine_pointer_size_64 compilers: Checking arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/iforttempfileK9oNuG compilers: Unknown arg -mGLOB_driver_tempfile_name=/global/scratch2/sd/madams/iforttempfileK9oNuG compilers: Checking arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Unknown arg -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS compilers: Checking arg -mGLOB_async_unwind_tables=TRUE compilers: Unknown arg -mGLOB_async_unwind_tables=TRUE compilers: Checking arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_ifortkwJTst.o compilers: Unknown arg -mGLOB_obj_output_file=/global/scratch2/sd/madams/ipo_ifortkwJTst.o compilers: Checking arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Unknown arg -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_NONE compilers: Checking arg -mP1OPT_source_file_name=ipo_out.f compilers: Unknown arg -mP1OPT_source_file_name=ipo_out.f compilers: Checking arg -mP2OPT_symtab_type_copy=true compilers: Unknown arg -mP2OPT_symtab_type_copy=true compilers: Checking arg -mP1OPT_max_rec_copy_size=256 compilers: Unknown arg -mP1OPT_max_rec_copy_size=256 compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -mIPOPT_object_files=T compilers: Unknown arg -mIPOPT_object_files=T compilers: Checking arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/ifortalisQO02zd compilers: Unknown arg -mIPOPT_assembly_files=/global/scratch2/sd/madams/ifortalisQO02zd compilers: Checking arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/ifortelisHofHD5 compilers: Unknown arg -mIPOPT_generated_tempfiles=/global/scratch2/sd/madams/ifortelisHofHD5 compilers: Checking arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/iforteobjFVjoHX compilers: Unknown arg -mIPOPT_embedded_object_base_name=/global/scratch2/sd/madams/iforteobjFVjoHX compilers: Checking arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/ifortllisCqW7KP compilers: Unknown arg -mIPOPT_cmdline_link_new_name=/global/scratch2/sd/madams/ifortllisCqW7KP compilers: Checking arg x86_64-k1om-linux-ld compilers: Unknown arg x86_64-k1om-linux-ld compilers: Checking arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Unknown arg --sysroot=/usr/linux-k1om-4.7/linux-k1om compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crt1.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crti.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtbegin.o compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-k1om.so.2 compilers: Unknown arg /lib64/ld-linux-k1om.so.2 compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_k1om compilers: Unknown arg elf_k1om compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/lib/gcc compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest compilers: Checking arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o compilers: Unknown arg /chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/for_main.o compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic compilers: Checking arg -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Already in lflags so skipping: -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/../lib/gcc compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/lib/gcc compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/lib64 compilers: Checking arg -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Already in lflags so skipping: -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Already in lflags: -lmkl_core compilers: Checking arg -liomp5 compilers: Already in lflags: -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Unknown arg /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lmpigf compilers: Already in lflags: -lmpigf compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lmpigi compilers: Already in lflags: -lmpigi compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lmkl_intel_lp64 compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Already in lflags: -lmkl_core compilers: Checking arg -liomp5 compilers: Already in lflags: -liomp5 compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -limf compilers: Already in lflags: -limf compilers: Checking arg -lsvml compilers: Already in lflags: -lsvml compilers: Checking arg -lirng compilers: Already in lflags: -lirng compilers: Checking arg -lipgo compilers: Already in lflags: -lipgo compilers: Checking arg -ldecimal compilers: Already in lflags: -ldecimal compilers: Checking arg -lcilkrts compilers: Already in lflags: -lcilkrts compilers: Checking arg -lstdc++ compilers: Already in lflags: -lstdc++ compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -lirc compilers: Already in lflags: -lirc compilers: Checking arg -lirc_s compilers: Already in lflags: -lirc_s compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg --enable-new-dtags compilers: Unknown arg --enable-new-dtags compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -lmpigf compilers: Already in lflags: -lmpigf compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lmpigi compilers: Already in lflags: -lmpigi compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Already in lflags so skipping: -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lmkl_intel_lp64 compilers: Already in lflags: -lmkl_intel_lp64 compilers: Checking arg -lmkl_intel_thread compilers: Already in lflags: -lmkl_intel_thread compilers: Checking arg -lmkl_core compilers: Already in lflags: -lmkl_core compilers: Checking arg -liomp5 compilers: Already in lflags: -liomp5 compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lifport compilers: Already in lflags: -lifport compilers: Checking arg -lifcore compilers: Already in lflags: -lifcore compilers: Checking arg -limf compilers: Already in lflags: -limf compilers: Checking arg -lsvml compilers: Already in lflags: -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lipgo compilers: Already in lflags: -lipgo compilers: Checking arg -lirc compilers: Already in lflags: -lirc compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lsvml compilers: Already in lflags: -lsvml compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -lc compilers: Found system library therefor skipping: -lc compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -Bstatic compilers: Unknown arg -Bstatic compilers: Checking arg -lirc_s compilers: Already in lflags: -lirc_s compilers: Checking arg -Bdynamic compilers: Unknown arg -Bdynamic compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lc compilers: Found system library therefor skipping: -lc compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/k1om-mpss-linux/4.7.0/crtend.o compilers: Checking arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Unknown arg /usr/linux-k1om-4.7/linux-k1om/usr/lib64/crtn.o compilers: Checking arg x86_64-k1om-linux-ld: compilers: Unknown arg x86_64-k1om-linux-ld: compilers: Checking arg warning: compilers: Unknown arg warning: compilers: Checking arg libintlc.so.5, compilers: Unknown arg libintlc.so.5, compilers: Checking arg needed compilers: Unknown arg needed compilers: Checking arg by compilers: Unknown arg by compilers: Checking arg /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, compilers: Unknown arg /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, compilers: Checking arg not compilers: Unknown arg not compilers: Checking arg found compilers: Unknown arg found compilers: Checking arg (try compilers: Unknown arg (try compilers: Checking arg using compilers: Unknown arg using compilers: Checking arg -rpath compilers: Found -rpath library: /chos/global/u2/m/madams/petsc/or compilers: Checking arg -rpath-link) compilers: Unknown arg -rpath-link) compilers: Libraries needed to link Fortran code with the C linker: ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1061) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1061) Check that Fortran can be linked against C++ Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/cxxobj.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confc.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC compilers: Fortran can link C++ functions ================================================================================ TEST checkFortran90 from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1096) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1096) Determine whether the Fortran compiler handles F90 Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1109) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1109) Determine whether the Fortran compiler handles F2003 Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1129) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1129) Check for F90 array interfaces Executing: mpiifort -V compilers: Using --with-batch, so guess that F90 uses a single argument for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1216) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1216) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confdir -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confdir -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/configtest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1282) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1282) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -module /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/confdir -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/compilers.py:1413) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1413) ================================================================================ TEST configureFortranCPP from PETSc.utilities.fortranCPP(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.utilities.fortranCPP(config/PETSc/utilities/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] ================================================================================ TEST checkStdC from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/string.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 35 "/usr/include/string.h" 2 3 extern void *memcpy (void *__restrict __dest, __const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, __const void *__src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, __const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 95 "/usr/include/string.h" 3 extern void *memchr (__const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 124 "/usr/include/string.h" 3 extern char *strcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 163 "/usr/include/string.h" 2 3 extern int strcoll_l (__const char *__s1, __const char *__s2, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, __const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (__const char *__string, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 209 "/usr/include/string.h" 3 # 235 "/usr/include/string.h" 3 extern char *strchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 262 "/usr/include/string.h" 3 extern char *strrchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 280 "/usr/include/string.h" 3 extern size_t strcspn (__const char *__s, __const char *__reject) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 314 "/usr/include/string.h" 3 extern char *strpbrk (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 342 "/usr/include/string.h" 3 extern char *strstr (__const char *__haystack, __const char *__needle) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 377 "/usr/include/string.h" 3 # 395 "/usr/include/string.h" 3 extern size_t strlen (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (__const char *__string, size_t __maxlen) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__)); extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 442 "/usr/include/string.h" 3 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 489 "/usr/include/string.h" 3 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 517 "/usr/include/string.h" 3 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 534 "/usr/include/string.h" 3 extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 555 "/usr/include/string.h" 3 extern char *strsep (char **__restrict __stringp, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__)); extern char *__stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 610 "/usr/include/string.h" 3 # 1 "/usr/include/bits/string.h" 1 3 # 635 "/usr/include/string.h" 2 3 # 1 "/usr/include/bits/string2.h" 1 3 # 638 "/usr/include/string.h" 2 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 26 "/usr/include/stdlib.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 34 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitflags.h" 1 3 # 43 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitstatus.h" 1 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 66 "/usr/include/bits/waitstatus.h" 2 3 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; # 84 "/usr/include/bits/waitstatus.h" 3 } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; # 97 "/usr/include/bits/waitstatus.h" 3 } __wait_stopped; }; # 44 "/usr/include/stdlib.h" 2 3 # 57 "/usr/include/stdlib.h" 3 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 83 "/usr/include/stdlib.h" 3 # 95 "/usr/include/stdlib.h" 3 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 274 "/usr/include/stdlib.h" 3 extern __inline double __attribute__ ((__nothrow__)) atof (__const char *__nptr) { return strtod (__nptr, (char **) ((void*)0)); } extern __inline int __attribute__ ((__nothrow__)) atoi (__const char *__nptr) { return (int) strtol (__nptr, (char **) ((void*)0), 10); } extern __inline long int __attribute__ ((__nothrow__)) atol (__const char *__nptr) { return strtol (__nptr, (char **) ((void*)0), 10); } __extension__ extern __inline long long int __attribute__ ((__nothrow__)) atoll (__const char *__nptr) { return strtoll (__nptr, (char **) ((void*)0), 10); } extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 321 "/usr/include/stdlib.h" 2 3 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/alloca.h" 2 3 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 531 "/usr/include/stdlib.h" 3 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 554 "/usr/include/stdlib.h" 3 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__)); extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 633 "/usr/include/stdlib.h" 3 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 656 "/usr/include/stdlib.h" 3 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 710 "/usr/include/stdlib.h" 3 extern int system (__const char *__command) ; # 727 "/usr/include/stdlib.h" 3 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 751 "/usr/include/stdlib.h" 3 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 932 "/usr/include/stdlib.h" 3 # 943 "/usr/include/stdlib.h" 3 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 960 "/usr/include/stdlib.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 5 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/stat.h" 1 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 40 "/usr/include/sys/stat.h" 2 3 # 63 "/usr/include/sys/stat.h" 3 # 82 "/usr/include/sys/stat.h" 3 # 104 "/usr/include/sys/stat.h" 3 # 1 "/usr/include/bits/stat.h" 1 3 # 39 "/usr/include/bits/stat.h" 3 struct stat { __dev_t st_dev; __ino_t st_ino; # 61 "/usr/include/bits/stat.h" 3 __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad0; __dev_t st_rdev; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; # 106 "/usr/include/bits/stat.h" 3 long int __unused[3]; # 115 "/usr/include/bits/stat.h" 3 }; # 173 "/usr/include/bits/stat.h" 3 # 192 "/usr/include/bits/stat.h" 3 # 207 "/usr/include/bits/stat.h" 3 # 108 "/usr/include/sys/stat.h" 2 3 # 126 "/usr/include/sys/stat.h" 3 # 141 "/usr/include/sys/stat.h" 3 # 152 "/usr/include/sys/stat.h" 3 extern int stat (__const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int fstat (int __fd, struct stat *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 234 "/usr/include/sys/stat.h" 3 extern int fstatat (int __fd, __const char *__restrict __file, struct stat *__restrict __buf, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 253 "/usr/include/sys/stat.h" 3 # 260 "/usr/include/sys/stat.h" 3 extern int lstat (__const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 283 "/usr/include/sys/stat.h" 3 extern int chmod (__const char *__file, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lchmod (__const char *__file, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int fchmod (int __fd, __mode_t __mode) __attribute__ ((__nothrow__)); extern int fchmodat (int __fd, __const char *__file, __mode_t __mode, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern __mode_t umask (__mode_t __mask) __attribute__ ((__nothrow__)); extern int mkdir (__const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mkdirat (int __fd, __const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int mknod (__const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mknodat (int __fd, __const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int mkfifo (__const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mkfifoat (int __fd, __const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int utimensat (int __fd, __const char *__path, __const struct timespec __times[2], int __flags) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int futimens (int __fd, __const struct timespec __times[2]) __attribute__ ((__nothrow__)); # 398 "/usr/include/sys/stat.h" 3 extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))); extern int __xstat (int __ver, __const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int __lxstat (int __ver, __const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int __fxstatat (int __ver, int __fildes, __const char *__filename, struct stat *__stat_buf, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))); # 432 "/usr/include/sys/stat.h" 3 # 444 "/usr/include/sys/stat.h" 3 extern int __xmknod (int __ver, __const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int __xmknodat (int __ver, int __fd, __const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 5))); extern __inline int __attribute__ ((__nothrow__)) stat (__const char *__path, struct stat *__statbuf) { return __xstat (1, __path, __statbuf); } extern __inline int __attribute__ ((__nothrow__)) lstat (__const char *__path, struct stat *__statbuf) { return __lxstat (1, __path, __statbuf); } extern __inline int __attribute__ ((__nothrow__)) fstat (int __fd, struct stat *__statbuf) { return __fxstat (1, __fd, __statbuf); } extern __inline int __attribute__ ((__nothrow__)) fstatat (int __fd, __const char *__filename, struct stat *__statbuf, int __flag) { return __fxstatat (1, __fd, __filename, __statbuf, __flag); } extern __inline int __attribute__ ((__nothrow__)) mknod (__const char *__path, __mode_t __mode, __dev_t __dev) { return __xmknod (0, __path, __mode, &__dev); } extern __inline int __attribute__ ((__nothrow__)) mknodat (int __fd, __const char *__path, __mode_t __mode, __dev_t __dev) { return __xmknodat (0, __fd, __path, __mode, &__dev); } # 533 "/usr/include/sys/stat.h" 3 # 6 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 ================================================================================ TEST checkSysWait from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/time.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 39 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 43 "/usr/include/bits/time.h" 3 # 43 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 211 "/usr/include/time.h" 3 # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 401 "/usr/include/time.h" 3 # 416 "/usr/include/time.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/time.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 typedef __time_t time_t; # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 28 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 30 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 32 "/usr/include/sys/time.h" 2 3 # 52 "/usr/include/sys/time.h" 3 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (__const struct timeval *__tv, __const struct timezone *__tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int adjtime (__const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__)); extern int setitimer (__itimer_which_t __which, __const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__)); extern int utimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)); # 159 "/usr/include/sys/time.h" 3 # 190 "/usr/include/sys/time.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIME_H" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 1 3 # 1 "/usr/include/math.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_val.h" 1 3 # 35 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_valf.h" 1 3 # 37 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_vall.h" 1 3 # 38 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/inf.h" 1 3 # 41 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/nan.h" 1 3 # 44 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathdef.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/bits/mathdef.h" 2 3 typedef float float_t; typedef double double_t; # 43 "/usr/include/bits/mathdef.h" 3 # 48 "/usr/include/math.h" 2 3 # 66 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern double acos (double __x) __attribute__ ((__nothrow__)); extern double __acos (double __x) __attribute__ ((__nothrow__)); extern double asin (double __x) __attribute__ ((__nothrow__)); extern double __asin (double __x) __attribute__ ((__nothrow__)); extern double atan (double __x) __attribute__ ((__nothrow__)); extern double __atan (double __x) __attribute__ ((__nothrow__)); extern double atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double __atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double cos (double __x) __attribute__ ((__nothrow__)); extern double __cos (double __x) __attribute__ ((__nothrow__)); extern double sin (double __x) __attribute__ ((__nothrow__)); extern double __sin (double __x) __attribute__ ((__nothrow__)); extern double tan (double __x) __attribute__ ((__nothrow__)); extern double __tan (double __x) __attribute__ ((__nothrow__)); extern double cosh (double __x) __attribute__ ((__nothrow__)); extern double __cosh (double __x) __attribute__ ((__nothrow__)); extern double sinh (double __x) __attribute__ ((__nothrow__)); extern double __sinh (double __x) __attribute__ ((__nothrow__)); extern double tanh (double __x) __attribute__ ((__nothrow__)); extern double __tanh (double __x) __attribute__ ((__nothrow__)); extern double acosh (double __x) __attribute__ ((__nothrow__)); extern double __acosh (double __x) __attribute__ ((__nothrow__)); extern double asinh (double __x) __attribute__ ((__nothrow__)); extern double __asinh (double __x) __attribute__ ((__nothrow__)); extern double atanh (double __x) __attribute__ ((__nothrow__)); extern double __atanh (double __x) __attribute__ ((__nothrow__)); extern double exp (double __x) __attribute__ ((__nothrow__)); extern double __exp (double __x) __attribute__ ((__nothrow__)); extern double frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double __frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double __ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double log (double __x) __attribute__ ((__nothrow__)); extern double __log (double __x) __attribute__ ((__nothrow__)); extern double log10 (double __x) __attribute__ ((__nothrow__)); extern double __log10 (double __x) __attribute__ ((__nothrow__)); extern double modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); extern double __modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern double expm1 (double __x) __attribute__ ((__nothrow__)); extern double __expm1 (double __x) __attribute__ ((__nothrow__)); extern double log1p (double __x) __attribute__ ((__nothrow__)); extern double __log1p (double __x) __attribute__ ((__nothrow__)); extern double logb (double __x) __attribute__ ((__nothrow__)); extern double __logb (double __x) __attribute__ ((__nothrow__)); extern double exp2 (double __x) __attribute__ ((__nothrow__)); extern double __exp2 (double __x) __attribute__ ((__nothrow__)); extern double log2 (double __x) __attribute__ ((__nothrow__)); extern double __log2 (double __x) __attribute__ ((__nothrow__)); extern double pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double __pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double sqrt (double __x) __attribute__ ((__nothrow__)); extern double __sqrt (double __x) __attribute__ ((__nothrow__)); extern double hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double __hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double cbrt (double __x) __attribute__ ((__nothrow__)); extern double __cbrt (double __x) __attribute__ ((__nothrow__)); extern double ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern int __isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double __drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double significand (double __x) __attribute__ ((__nothrow__)); extern double __significand (double __x) __attribute__ ((__nothrow__)); extern double copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double j0 (double) __attribute__ ((__nothrow__)); extern double __j0 (double) __attribute__ ((__nothrow__)); extern double j1 (double) __attribute__ ((__nothrow__)); extern double __j1 (double) __attribute__ ((__nothrow__)); extern double jn (int, double) __attribute__ ((__nothrow__)); extern double __jn (int, double) __attribute__ ((__nothrow__)); extern double y0 (double) __attribute__ ((__nothrow__)); extern double __y0 (double) __attribute__ ((__nothrow__)); extern double y1 (double) __attribute__ ((__nothrow__)); extern double __y1 (double) __attribute__ ((__nothrow__)); extern double yn (int, double) __attribute__ ((__nothrow__)); extern double __yn (int, double) __attribute__ ((__nothrow__)); extern double erf (double) __attribute__ ((__nothrow__)); extern double __erf (double) __attribute__ ((__nothrow__)); extern double erfc (double) __attribute__ ((__nothrow__)); extern double __erfc (double) __attribute__ ((__nothrow__)); extern double lgamma (double) __attribute__ ((__nothrow__)); extern double __lgamma (double) __attribute__ ((__nothrow__)); extern double tgamma (double) __attribute__ ((__nothrow__)); extern double __tgamma (double) __attribute__ ((__nothrow__)); extern double gamma (double) __attribute__ ((__nothrow__)); extern double __gamma (double) __attribute__ ((__nothrow__)); extern double lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double __lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double rint (double __x) __attribute__ ((__nothrow__)); extern double __rint (double __x) __attribute__ ((__nothrow__)); extern double nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double __remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern double __scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogb (double __x) __attribute__ ((__nothrow__)); extern int __ilogb (double __x) __attribute__ ((__nothrow__)); extern double scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double __scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double nearbyint (double __x) __attribute__ ((__nothrow__)); extern double __nearbyint (double __x) __attribute__ ((__nothrow__)); extern double round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern double __remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrint (double __x) __attribute__ ((__nothrow__)); extern long int __lrint (double __x) __attribute__ ((__nothrow__)); extern long long int llrint (double __x) __attribute__ ((__nothrow__)); extern long long int __llrint (double __x) __attribute__ ((__nothrow__)); extern long int lround (double __x) __attribute__ ((__nothrow__)); extern long int __lround (double __x) __attribute__ ((__nothrow__)); extern long long int llround (double __x) __attribute__ ((__nothrow__)); extern long long int __llround (double __x) __attribute__ ((__nothrow__)); extern double fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern int __fpclassify (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbit (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double __fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double scalb (double __x, double __n) __attribute__ ((__nothrow__)); extern double __scalb (double __x, double __n) __attribute__ ((__nothrow__)); # 72 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern float acosf (float __x) __attribute__ ((__nothrow__)); extern float __acosf (float __x) __attribute__ ((__nothrow__)); extern float asinf (float __x) __attribute__ ((__nothrow__)); extern float __asinf (float __x) __attribute__ ((__nothrow__)); extern float atanf (float __x) __attribute__ ((__nothrow__)); extern float __atanf (float __x) __attribute__ ((__nothrow__)); extern float atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float __atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float cosf (float __x) __attribute__ ((__nothrow__)); extern float __cosf (float __x) __attribute__ ((__nothrow__)); extern float sinf (float __x) __attribute__ ((__nothrow__)); extern float __sinf (float __x) __attribute__ ((__nothrow__)); extern float tanf (float __x) __attribute__ ((__nothrow__)); extern float __tanf (float __x) __attribute__ ((__nothrow__)); extern float coshf (float __x) __attribute__ ((__nothrow__)); extern float __coshf (float __x) __attribute__ ((__nothrow__)); extern float sinhf (float __x) __attribute__ ((__nothrow__)); extern float __sinhf (float __x) __attribute__ ((__nothrow__)); extern float tanhf (float __x) __attribute__ ((__nothrow__)); extern float __tanhf (float __x) __attribute__ ((__nothrow__)); extern float acoshf (float __x) __attribute__ ((__nothrow__)); extern float __acoshf (float __x) __attribute__ ((__nothrow__)); extern float asinhf (float __x) __attribute__ ((__nothrow__)); extern float __asinhf (float __x) __attribute__ ((__nothrow__)); extern float atanhf (float __x) __attribute__ ((__nothrow__)); extern float __atanhf (float __x) __attribute__ ((__nothrow__)); extern float expf (float __x) __attribute__ ((__nothrow__)); extern float __expf (float __x) __attribute__ ((__nothrow__)); extern float frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float __frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float __ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float logf (float __x) __attribute__ ((__nothrow__)); extern float __logf (float __x) __attribute__ ((__nothrow__)); extern float log10f (float __x) __attribute__ ((__nothrow__)); extern float __log10f (float __x) __attribute__ ((__nothrow__)); extern float modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); extern float __modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern float expm1f (float __x) __attribute__ ((__nothrow__)); extern float __expm1f (float __x) __attribute__ ((__nothrow__)); extern float log1pf (float __x) __attribute__ ((__nothrow__)); extern float __log1pf (float __x) __attribute__ ((__nothrow__)); extern float logbf (float __x) __attribute__ ((__nothrow__)); extern float __logbf (float __x) __attribute__ ((__nothrow__)); extern float exp2f (float __x) __attribute__ ((__nothrow__)); extern float __exp2f (float __x) __attribute__ ((__nothrow__)); extern float log2f (float __x) __attribute__ ((__nothrow__)); extern float __log2f (float __x) __attribute__ ((__nothrow__)); extern float powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float sqrtf (float __x) __attribute__ ((__nothrow__)); extern float __sqrtf (float __x) __attribute__ ((__nothrow__)); extern float hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float cbrtf (float __x) __attribute__ ((__nothrow__)); extern float __cbrtf (float __x) __attribute__ ((__nothrow__)); extern float ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float significandf (float __x) __attribute__ ((__nothrow__)); extern float __significandf (float __x) __attribute__ ((__nothrow__)); extern float copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float j0f (float) __attribute__ ((__nothrow__)); extern float __j0f (float) __attribute__ ((__nothrow__)); extern float j1f (float) __attribute__ ((__nothrow__)); extern float __j1f (float) __attribute__ ((__nothrow__)); extern float jnf (int, float) __attribute__ ((__nothrow__)); extern float __jnf (int, float) __attribute__ ((__nothrow__)); extern float y0f (float) __attribute__ ((__nothrow__)); extern float __y0f (float) __attribute__ ((__nothrow__)); extern float y1f (float) __attribute__ ((__nothrow__)); extern float __y1f (float) __attribute__ ((__nothrow__)); extern float ynf (int, float) __attribute__ ((__nothrow__)); extern float __ynf (int, float) __attribute__ ((__nothrow__)); extern float erff (float) __attribute__ ((__nothrow__)); extern float __erff (float) __attribute__ ((__nothrow__)); extern float erfcf (float) __attribute__ ((__nothrow__)); extern float __erfcf (float) __attribute__ ((__nothrow__)); extern float lgammaf (float) __attribute__ ((__nothrow__)); extern float __lgammaf (float) __attribute__ ((__nothrow__)); extern float tgammaf (float) __attribute__ ((__nothrow__)); extern float __tgammaf (float) __attribute__ ((__nothrow__)); extern float gammaf (float) __attribute__ ((__nothrow__)); extern float __gammaf (float) __attribute__ ((__nothrow__)); extern float lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float __lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float rintf (float __x) __attribute__ ((__nothrow__)); extern float __rintf (float __x) __attribute__ ((__nothrow__)); extern float nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern float __scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbf (float __x) __attribute__ ((__nothrow__)); extern int __ilogbf (float __x) __attribute__ ((__nothrow__)); extern float scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float __scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float __nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern float __remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintf (float __x) __attribute__ ((__nothrow__)); extern long int __lrintf (float __x) __attribute__ ((__nothrow__)); extern long long int llrintf (float __x) __attribute__ ((__nothrow__)); extern long long int __llrintf (float __x) __attribute__ ((__nothrow__)); extern long int lroundf (float __x) __attribute__ ((__nothrow__)); extern long int __lroundf (float __x) __attribute__ ((__nothrow__)); extern long long int llroundf (float __x) __attribute__ ((__nothrow__)); extern long long int __llroundf (float __x) __attribute__ ((__nothrow__)); extern float fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __fpclassifyf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float __fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float scalbf (float __x, float __n) __attribute__ ((__nothrow__)); extern float __scalbf (float __x, float __n) __attribute__ ((__nothrow__)); # 95 "/usr/include/math.h" 2 3 # 129 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern long double acosl (long double __x) __attribute__ ((__nothrow__)); extern long double __acosl (long double __x) __attribute__ ((__nothrow__)); extern long double asinl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinl (long double __x) __attribute__ ((__nothrow__)); extern long double atanl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanl (long double __x) __attribute__ ((__nothrow__)); extern long double atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double __atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double cosl (long double __x) __attribute__ ((__nothrow__)); extern long double __cosl (long double __x) __attribute__ ((__nothrow__)); extern long double sinl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinl (long double __x) __attribute__ ((__nothrow__)); extern long double tanl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanl (long double __x) __attribute__ ((__nothrow__)); extern long double coshl (long double __x) __attribute__ ((__nothrow__)); extern long double __coshl (long double __x) __attribute__ ((__nothrow__)); extern long double sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double __acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double expl (long double __x) __attribute__ ((__nothrow__)); extern long double __expl (long double __x) __attribute__ ((__nothrow__)); extern long double frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double __frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double __ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double logl (long double __x) __attribute__ ((__nothrow__)); extern long double __logl (long double __x) __attribute__ ((__nothrow__)); extern long double log10l (long double __x) __attribute__ ((__nothrow__)); extern long double __log10l (long double __x) __attribute__ ((__nothrow__)); extern long double modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); extern long double __modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern long double expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double __expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double __log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double logbl (long double __x) __attribute__ ((__nothrow__)); extern long double __logbl (long double __x) __attribute__ ((__nothrow__)); extern long double exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double __exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double log2l (long double __x) __attribute__ ((__nothrow__)); extern long double __log2l (long double __x) __attribute__ ((__nothrow__)); extern long double powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double significandl (long double __x) __attribute__ ((__nothrow__)); extern long double __significandl (long double __x) __attribute__ ((__nothrow__)); extern long double copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double j0l (long double) __attribute__ ((__nothrow__)); extern long double __j0l (long double) __attribute__ ((__nothrow__)); extern long double j1l (long double) __attribute__ ((__nothrow__)); extern long double __j1l (long double) __attribute__ ((__nothrow__)); extern long double jnl (int, long double) __attribute__ ((__nothrow__)); extern long double __jnl (int, long double) __attribute__ ((__nothrow__)); extern long double y0l (long double) __attribute__ ((__nothrow__)); extern long double __y0l (long double) __attribute__ ((__nothrow__)); extern long double y1l (long double) __attribute__ ((__nothrow__)); extern long double __y1l (long double) __attribute__ ((__nothrow__)); extern long double ynl (int, long double) __attribute__ ((__nothrow__)); extern long double __ynl (int, long double) __attribute__ ((__nothrow__)); extern long double erfl (long double) __attribute__ ((__nothrow__)); extern long double __erfl (long double) __attribute__ ((__nothrow__)); extern long double erfcl (long double) __attribute__ ((__nothrow__)); extern long double __erfcl (long double) __attribute__ ((__nothrow__)); extern long double lgammal (long double) __attribute__ ((__nothrow__)); extern long double __lgammal (long double) __attribute__ ((__nothrow__)); extern long double tgammal (long double) __attribute__ ((__nothrow__)); extern long double __tgammal (long double) __attribute__ ((__nothrow__)); extern long double gammal (long double) __attribute__ ((__nothrow__)); extern long double __gammal (long double) __attribute__ ((__nothrow__)); extern long double lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double __lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double rintl (long double __x) __attribute__ ((__nothrow__)); extern long double __rintl (long double __x) __attribute__ ((__nothrow__)); extern long double nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern long double __scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbl (long double __x) __attribute__ ((__nothrow__)); extern int __ilogbl (long double __x) __attribute__ ((__nothrow__)); extern long double scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double __scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double __nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long double __remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintl (long double __x) __attribute__ ((__nothrow__)); extern long int __lrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int llrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llrintl (long double __x) __attribute__ ((__nothrow__)); extern long int lroundl (long double __x) __attribute__ ((__nothrow__)); extern long int __lroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int llroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llroundl (long double __x) __attribute__ ((__nothrow__)); extern long double fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __fpclassifyl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double __fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); extern long double __scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); # 142 "/usr/include/math.h" 2 3 extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; # 223 "/usr/include/math.h" 3 # 235 "/usr/include/math.h" 3 # 247 "/usr/include/math.h" 3 # 263 "/usr/include/math.h" 3 # 275 "/usr/include/math.h" 3 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); # 341 "/usr/include/math.h" 3 # 353 "/usr/include/math.h" 3 # 371 "/usr/include/math.h" 3 # 390 "/usr/include/math.h" 3 # 413 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathinline.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 26 "/usr/include/bits/mathinline.h" 2 3 extern __inline int __attribute__ ((__nothrow__)) __signbitf (float __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x8; } extern __inline int __attribute__ ((__nothrow__)) __signbit (double __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x80; } extern __inline int __attribute__ ((__nothrow__)) __signbitl (long double __x) { __extension__ union { long double __l; int __i[3]; } __u = { __l: __x }; return (__u.__i[2] & 0x8000) != 0; } # 417 "/usr/include/math.h" 2 3 # 429 "/usr/include/math.h" 3 # 437 "/usr/include/math.h" 3 # 445 "/usr/include/math.h" 3 # 453 "/usr/include/math.h" 3 # 461 "/usr/include/math.h" 3 # 469 "/usr/include/math.h" 3 # 20 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 2 3 # 38 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 62 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 110 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 118 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 129 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 158 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 172 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 197 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 213 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern int fpclassifyf ( float __x ) ; extern int fpclassify ( double __x ) ; extern int fpclassifyd ( double __x ) ; extern int fpclassifyl ( long double __x ) ; extern int __fpclassifyf ( float __x ) ; extern int __fpclassify ( double __x ) ; extern int __fpclassifyd ( double __x ) ; extern int __fpclassifyl ( long double __x ) ; extern int isinff ( float __x ) ; extern int isinf ( double __x ) ; extern int isinfd ( double __x ) ; extern int isinfl ( long double __x ) ; extern int __isinff ( float __x ) ; extern int __isinf ( double __x ) ; extern int __isinfd ( double __x ) ; extern int __isinfl ( long double __x ) ; extern int isnanf ( float __x ) ; extern int isnan ( double __x ) ; extern int isnand ( double __x ) ; extern int isnanl ( long double __x ) ; extern int __isnanf ( float __x ) ; extern int __isnan ( double __x ) ; extern int __isnand ( double __x ) ; extern int __isnanl ( long double __x ) ; extern int isnormalf ( float __x ) ; extern int isnormal ( double __x ) ; extern int isnormald ( double __x ) ; extern int isnormall ( long double __x ) ; extern int __isnormalf ( float __x ) ; extern int __isnormal ( double __x ) ; extern int __isnormald ( double __x ) ; extern int __isnormall ( long double __x ) ; extern int isfinitef ( float __x ) ; extern int isfinite ( double __x ) ; extern int isfinited ( double __x ) ; extern int isfinitel ( long double __x ) ; extern int __isfinitef ( float __x ) ; extern int __isfinite ( double __x ) ; extern int __isfinited ( double __x ) ; extern int __isfinitel ( long double __x ) ; extern int finitef ( float __x ) ; extern int finite ( double __x ) ; extern int finited ( double __x ) ; extern int finitel ( long double __x ) ; extern int __finitef ( float __x ) ; extern int __finite ( double __x ) ; extern int __finited ( double __x ) ; extern int __finitel ( long double __x ) ; extern int signbitf ( float __x ) ; extern int signbit ( double __x ) ; extern int signbitd ( double __x ) ; extern int signbitl ( long double __x ) ; extern int __signbitf ( float __x ) ; extern int __signbit ( double __x ) ; extern int __signbitd ( double __x ) ; extern int __signbitl ( long double __x ) ; # 322 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 343 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 350 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern int isgreaterf( float __xf, float __yf ); extern int isgreater( double __xd, double __yd ); extern int isgreaterl( long double __xl, long double __yl ); extern int __isgreaterf( float __xf, float __yf ); extern int __isgreater( double __xd, double __yd ); extern int __isgreaterl( long double __xl, long double __yl ); extern int isgreaterequalf( float __xf, float __yf ); extern int isgreaterequal( double __xd, double __yd ); extern int isgreaterequall( long double __xl, long double __yl ); extern int __isgreaterequalf( float __xf, float __yf ); extern int __isgreaterequal( double __xd, double __yd ); extern int __isgreaterequall( long double __xl, long double __yl ); extern int islessf( float __xf, float __yf ); extern int isless( double __xd, double __yd ); extern int islessl( long double __xl, long double __yl ); extern int __islessf( float __xf, float __yf ); extern int __isless( double __xd, double __yd ); extern int __islessl( long double __xl, long double __yl ); extern int islessequalf( float __xf, float __yf ); extern int islessequal( double __xd, double __yd ); extern int islessequall( long double __xl, long double __yl ); extern int __islessequalf( float __xf, float __yf ); extern int __islessequal( double __xd, double __yd ); extern int __islessequall( long double __xl, long double __yl ); extern int islessgreaterf( float __xf, float __yf ); extern int islessgreater( double __xd, double __yd ); extern int islessgreaterl( long double __xl, long double __yl ); extern int __islessgreaterf( float __xf, float __yf ); extern int __islessgreater( double __xd, double __yd ); extern int __islessgreaterl( long double __xl, long double __yl ); extern int isunorderedf( float __xf, float __yf ); extern int isunordered( double __xd, double __yd ); extern int isunorderedl( long double __xl, long double __yl ); extern int __isunorderedf( float __xf, float __yf ); extern int __isunordered( double __xd, double __yd ); extern int __isunorderedl( long double __xl, long double __yl ); # 404 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 411 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 427 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 437 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double cot( double __x ); extern float cotf( float __x ); extern long double cotl( long double __x ); extern double cosd( double __x ); extern float cosdf( float __x ); extern long double cosdl( long double __x ); extern double sind( double __x ); extern float sindf( float __x ); extern long double sindl( long double __x ); extern double tand( double __x ); extern float tandf( float __x ); extern long double tandl( long double __x ); extern double cotd( double __x ); extern float cotdf( float __x ); extern long double cotdl( long double __x ); extern double acosd( double __x ); extern float acosdf( float __x ); extern long double acosdl( long double __x ); extern double asind( double __x ); extern float asindf( float __x ); extern long double asindl( long double __x ); extern double atand( double __x ); extern float atandf( float __x ); extern long double atandl( long double __x ); extern double atand2( double __y, double __x ); extern float atand2f( float __y, float __x ); extern long double atand2l( long double __y, long double __x ); extern double atan2d( double __y, double __x ); extern float atan2df( float __y, float __x ); extern long double atan2dl( long double __y, long double __x ); extern void sincosd( double __x, double *__psin, double *__pcos ); extern void sincosdf( float __x, float *__psin, float *__pcos ); extern void sincosdl( long double __x, long double *__psin, long double *__pcos ); # 503 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern void sinhcosh( double __x, double *__psinh, double *__pcosh ); extern void sinhcoshf( float __x, float *__psinh, float *__pcosh ); extern void sinhcoshl( long double __x, long double *__psinh, long double *__pcosh ); # 517 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 544 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 558 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 599 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 622 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 641 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 652 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 661 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double invsqrt( double __x ); extern float invsqrtf( float __x ); extern long double invsqrtl( long double __x ); # 680 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double cdfnorm( double __x ); extern float cdfnormf( float __x ); extern double cdfnorminv( double __x ); extern float cdfnorminvf( float __x ); extern double erfinv( double __x ); extern float erfinvf( float __x ); extern long double erfinvl( long double __x ); extern double erfcinv( double __x ); extern float erfcinvf( float __x ); extern double gamma_r( double __x, int *__signgam ); extern float gammaf_r( float __x, int *__signgam ); extern long double gammal_r( long double __x, int *__signgam ); # 706 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 722 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 740 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 760 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 779 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 794 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 803 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 826 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double annuity( double __x, double __y ); extern double compound( double __x, double __y ); extern float annuityf( float __x, float __y ); extern long double annuityl( long double __x, long double __y ); extern float compoundf( float __x, float __y ); extern long double compoundl( long double __x, long double __y ); # 846 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 864 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 875 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 916 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 937 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1107 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1121 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef struct ____exception { int type; const char *name; double arg1; double arg2; double retval; } ___exception; # 1142 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef struct ____exceptionf { int type; const char *name; float arg1; float arg2; float retval; } ___exceptionf; typedef struct ____exceptionl { int type; const char *name; long double arg1; long double arg2; long double retval; } ___exceptionl; extern int matherrf( struct ____exceptionf *__e ); extern int matherrl( struct ____exceptionl *__e ); # 1174 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef int ( *___pmatherr )( struct ____exception *__e ); typedef int ( *___pmatherrf )( struct ____exceptionf *__e ); typedef int ( *___pmatherrl )( struct ____exceptionl *__e ); extern ___pmatherr __libm_setusermatherr( ___pmatherr __user_matherr ); extern ___pmatherrf __libm_setusermatherrf( ___pmatherrf __user_matherrf ); extern ___pmatherrl __libm_setusermatherrl( ___pmatherrl __user_matherrl ); # 1212 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern _LIB_VERSION_TYPE _LIB_VERSIONIMF; # 1226 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1439 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_MATH_H" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/socket.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 25 "/usr/include/sys/socket.h" 2 3 # 1 "/usr/include/sys/uio.h" 1 3 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 25 "/usr/include/sys/uio.h" 2 3 # 1 "/usr/include/bits/uio.h" 1 3 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 93 "/usr/include/sys/uio.h" 3 # 120 "/usr/include/sys/uio.h" 3 # 29 "/usr/include/sys/socket.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sys/socket.h" 2 3 # 1 "/usr/include/bits/socket.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 30 "/usr/include/bits/socket.h" 2 3 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 113 "/usr/include/bits/socket.h" 3 # 154 "/usr/include/bits/socket.h" 3 # 166 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/bits/sockaddr.h" 1 3 typedef unsigned short int sa_family_t; # 172 "/usr/include/bits/socket.h" 2 3 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, # 209 "/usr/include/bits/socket.h" 3 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; # 272 "/usr/include/bits/socket.h" 3 struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 303 "/usr/include/bits/socket.h" 3 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); extern __inline struct cmsghdr * __attribute__ ((__nothrow__)) __cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) { if ((size_t) __cmsg->cmsg_len < sizeof (struct cmsghdr)) return 0; __cmsg = (struct cmsghdr *) ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1))); if ((unsigned char *) (__cmsg + 1) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen) || ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1)) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen))) return 0; return __cmsg; } enum { SCM_RIGHTS = 0x01 }; # 350 "/usr/include/bits/socket.h" 3 # 375 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/asm/socket.h" 1 3 # 1 "/usr/include/asm-generic/socket.h" 1 3 # 1 "/usr/include/asm/sockios.h" 1 3 # 1 "/usr/include/asm-generic/sockios.h" 1 3 # 12 "/usr/include/asm-generic/sockios.h" 3 # 2 "/usr/include/asm/sockios.h" 2 3 # 5 "/usr/include/asm-generic/socket.h" 2 3 # 26 "/usr/include/asm-generic/socket.h" 3 # 35 "/usr/include/asm-generic/socket.h" 3 # 2 "/usr/include/asm/socket.h" 2 3 # 378 "/usr/include/bits/socket.h" 2 3 # 409 "/usr/include/bits/socket.h" 3 struct linger { int l_onoff; int l_linger; }; extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, __const struct timespec *__tmo); # 41 "/usr/include/sys/socket.h" 2 3 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 100 "/usr/include/sys/socket.h" 3 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 225 "/usr/include/sys/socket.h" 3 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/malloc.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 25 "/usr/include/malloc.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/malloc.h" 2 3 # 1 "/usr/include/stdio.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 35 "/usr/include/stdio.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 37 "/usr/include/stdio.h" 2 3 struct _IO_FILE; typedef struct _IO_FILE FILE; typedef struct _IO_FILE __FILE; # 1 "/usr/include/libio.h" 1 3 # 1 "/usr/include/_G_config.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 16 "/usr/include/_G_config.h" 2 3 # 1 "/usr/include/wchar.h" 1 3 # 79 "/usr/include/wchar.h" 3 typedef struct { int __count; union { unsigned int __wch; char __wchb[4]; } __value; } __mbstate_t; # 892 "/usr/include/wchar.h" 3 # 21 "/usr/include/_G_config.h" 2 3 typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; # 52 "/usr/include/_G_config.h" 3 typedef int _G_int16_t __attribute__ ((__mode__ (__HI__))); typedef int _G_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int _G_uint16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int _G_uint32_t __attribute__ ((__mode__ (__SI__))); # 74 "/usr/include/_G_config.h" 3 # 33 "/usr/include/libio.h" 2 3 # 49 "/usr/include/libio.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdarg.h" 1 3 # 102 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdarg.h" 3 typedef __builtin_va_list va_list; typedef __builtin_va_list __gnuc_va_list; # 54 "/usr/include/libio.h" 2 3 # 73 "/usr/include/libio.h" 3 # 88 "/usr/include/libio.h" 3 # 104 "/usr/include/libio.h" 3 # 113 "/usr/include/libio.h" 3 # 139 "/usr/include/libio.h" 3 # 149 "/usr/include/libio.h" 3 # 168 "/usr/include/libio.h" 3 struct _IO_jump_t; struct _IO_FILE; # 180 "/usr/include/libio.h" 3 typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; # 203 "/usr/include/libio.h" 3 }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; # 270 "/usr/include/libio.h" 3 struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; # 319 "/usr/include/libio.h" 3 __off64_t _offset; # 328 "/usr/include/libio.h" 3 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; # 358 "/usr/include/libio.h" 3 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, __const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); # 410 "/usr/include/libio.h" 3 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); # 442 "/usr/include/libio.h" 3 # 456 "/usr/include/libio.h" 3 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) __attribute__ ((__nothrow__)); extern int _IO_ferror (_IO_FILE *__fp) __attribute__ ((__nothrow__)); extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) __attribute__ ((__nothrow__)); extern void _IO_funlockfile (_IO_FILE *) __attribute__ ((__nothrow__)); extern int _IO_ftrylockfile (_IO_FILE *) __attribute__ ((__nothrow__)); # 489 "/usr/include/libio.h" 3 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) __attribute__ ((__nothrow__)); # 546 "/usr/include/libio.h" 3 # 76 "/usr/include/stdio.h" 2 3 typedef __gnuc_va_list va_list; # 87 "/usr/include/stdio.h" 3 typedef __off_t off_t; # 101 "/usr/include/stdio.h" 3 typedef __ssize_t ssize_t; typedef _G_fpos_t fpos_t; # 1 "/usr/include/bits/stdio_lim.h" 1 3 # 35 "/usr/include/bits/stdio_lim.h" 3 # 162 "/usr/include/stdio.h" 2 3 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (__const char *__filename) __attribute__ ((__nothrow__)); extern int rename (__const char *__old, __const char *__new) __attribute__ ((__nothrow__)); extern int renameat (int __oldfd, __const char *__old, int __newfd, __const char *__new) __attribute__ ((__nothrow__)); extern FILE *tmpfile (void) ; # 202 "/usr/include/stdio.h" 3 extern char *tmpnam (char *__s) __attribute__ ((__nothrow__)) ; extern char *tmpnam_r (char *__s) __attribute__ ((__nothrow__)) ; extern char *tempnam (__const char *__dir, __const char *__pfx) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); extern int fflush_unlocked (FILE *__stream); # 263 "/usr/include/stdio.h" 3 extern FILE *fopen (__const char *__restrict __filename, __const char *__restrict __modes) ; extern FILE *freopen (__const char *__restrict __filename, __const char *__restrict __modes, FILE *__restrict __stream) ; # 294 "/usr/include/stdio.h" 3 # 302 "/usr/include/stdio.h" 3 extern FILE *fdopen (int __fd, __const char *__modes) __attribute__ ((__nothrow__)) ; # 315 "/usr/include/stdio.h" 3 extern FILE *fmemopen (void *__s, size_t __len, __const char *__modes) __attribute__ ((__nothrow__)) ; extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) __attribute__ ((__nothrow__)) ; extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) __attribute__ ((__nothrow__)); extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) __attribute__ ((__nothrow__)); extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) __attribute__ ((__nothrow__)); extern void setlinebuf (FILE *__stream) __attribute__ ((__nothrow__)); extern int fprintf (FILE *__restrict __stream, __const char *__restrict __format, ...); extern int printf (__const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)); extern int vfprintf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg); extern int vprintf (__const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)); extern int snprintf (char *__restrict __s, size_t __maxlen, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 0))); # 408 "/usr/include/stdio.h" 3 extern int vdprintf (int __fd, __const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, __const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); extern int fscanf (FILE *__restrict __stream, __const char *__restrict __format, ...) ; extern int scanf (__const char *__restrict __format, ...) ; extern int sscanf (__const char *__restrict __s, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)); extern int fscanf (FILE *__restrict __stream, __const char *__restrict __format, ...) __asm__ ("" "__isoc99_fscanf") ; extern int scanf (__const char *__restrict __format, ...) __asm__ ("" "__isoc99_scanf") ; extern int sscanf (__const char *__restrict __s, __const char *__restrict __format, ...) __asm__ ("" "__isoc99_sscanf") __attribute__ ((__nothrow__)); # 466 "/usr/include/stdio.h" 3 extern int vfscanf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (__const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (__const char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__scanf__, 2, 0))); extern int vfscanf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vfscanf") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (__const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vscanf") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (__const char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vsscanf") __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__scanf__, 2, 0))); # 525 "/usr/include/stdio.h" 3 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; extern char *gets (char *__s) ; # 647 "/usr/include/stdio.h" 3 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; extern int fputs (__const char *__restrict __s, FILE *__restrict __stream); extern int puts (__const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite (__const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s) ; # 724 "/usr/include/stdio.h" 3 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (__const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; # 786 "/usr/include/stdio.h" 3 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); extern int fsetpos (FILE *__stream, __const fpos_t *__pos); # 810 "/usr/include/stdio.h" 3 # 818 "/usr/include/stdio.h" 3 extern void clearerr (FILE *__stream) __attribute__ ((__nothrow__)); extern int feof (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int ferror (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void clearerr_unlocked (FILE *__stream) __attribute__ ((__nothrow__)); extern int feof_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int ferror_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void perror (__const char *__s); # 1 "/usr/include/bits/sys_errlist.h" 1 3 extern int sys_nerr; extern __const char *__const sys_errlist[]; # 849 "/usr/include/stdio.h" 2 3 extern int fileno (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int fileno_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; extern FILE *popen (__const char *__command, __const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) __attribute__ ((__nothrow__)); # 902 "/usr/include/stdio.h" 3 extern void flockfile (FILE *__stream) __attribute__ ((__nothrow__)); extern int ftrylockfile (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void funlockfile (FILE *__stream) __attribute__ ((__nothrow__)); # 925 "/usr/include/stdio.h" 3 # 1 "/usr/include/bits/stdio.h" 1 3 extern __inline int vprintf (__const char *__restrict __fmt, __gnuc_va_list __arg) { return vfprintf (stdout, __fmt, __arg); } extern __inline int getchar (void) { return _IO_getc (stdin); } extern __inline int fgetc_unlocked (FILE *__fp) { return (__builtin_expect (((__fp)->_IO_read_ptr >= (__fp)->_IO_read_end), 0) ? __uflow (__fp) : *(unsigned char *) (__fp)->_IO_read_ptr++); } extern __inline int getc_unlocked (FILE *__fp) { return (__builtin_expect (((__fp)->_IO_read_ptr >= (__fp)->_IO_read_end), 0) ? __uflow (__fp) : *(unsigned char *) (__fp)->_IO_read_ptr++); } extern __inline int getchar_unlocked (void) { return (__builtin_expect (((stdin)->_IO_read_ptr >= (stdin)->_IO_read_end), 0) ? __uflow (stdin) : *(unsigned char *) (stdin)->_IO_read_ptr++); } extern __inline int putchar (int __c) { return _IO_putc (__c, stdout); } extern __inline int fputc_unlocked (int __c, FILE *__stream) { return (__builtin_expect (((__stream)->_IO_write_ptr >= (__stream)->_IO_write_end), 0) ? __overflow (__stream, (unsigned char) (__c)) : (unsigned char) (*(__stream)->_IO_write_ptr++ = (__c))); } extern __inline int putc_unlocked (int __c, FILE *__stream) { return (__builtin_expect (((__stream)->_IO_write_ptr >= (__stream)->_IO_write_end), 0) ? __overflow (__stream, (unsigned char) (__c)) : (unsigned char) (*(__stream)->_IO_write_ptr++ = (__c))); } extern __inline int putchar_unlocked (int __c) { return (__builtin_expect (((stdout)->_IO_write_ptr >= (stdout)->_IO_write_end), 0) ? __overflow (stdout, (unsigned char) (__c)) : (unsigned char) (*(stdout)->_IO_write_ptr++ = (__c))); } # 121 "/usr/include/bits/stdio.h" 3 extern __inline int __attribute__ ((__nothrow__)) feof_unlocked (FILE *__stream) { return (((__stream)->_flags & 0x10) != 0); } extern __inline int __attribute__ ((__nothrow__)) ferror_unlocked (FILE *__stream) { return (((__stream)->_flags & 0x20) != 0); } # 168 "/usr/include/bits/stdio.h" 3 # 189 "/usr/include/bits/stdio.h" 3 # 930 "/usr/include/stdio.h" 2 3 # 937 "/usr/include/stdio.h" 3 # 27 "/usr/include/malloc.h" 2 3 # 46 "/usr/include/malloc.h" 3 extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); extern void *memalign (size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void * pvalloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)); struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void) __attribute__ ((__nothrow__)); # 123 "/usr/include/malloc.h" 3 # 133 "/usr/include/malloc.h" 3 extern int mallopt (int __param, int __val) __attribute__ ((__nothrow__)); extern int malloc_trim (size_t __pad) __attribute__ ((__nothrow__)); extern size_t malloc_usable_size (void *__ptr) __attribute__ ((__nothrow__)); extern void malloc_stats (void) __attribute__ ((__nothrow__)); extern int malloc_info (int __options, FILE *__fp); extern void *malloc_get_state (void) __attribute__ ((__nothrow__)); extern int malloc_set_state (void *__ptr) __attribute__ ((__nothrow__)); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, __const void *); extern void *(*__malloc_hook) (size_t __size, __const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, __const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, __const void *); extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/time.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 39 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 43 "/usr/include/bits/time.h" 3 # 43 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 211 "/usr/include/time.h" 3 # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 401 "/usr/include/time.h" 3 # 416 "/usr/include/time.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "Direct.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "Ws2tcpip.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 23 "/usr/include/endian.h" 2 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/strings.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/strings.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/strings.h" 2 3 extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)); # 74 "/usr/include/strings.h" 3 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 102 "/usr/include/strings.h" 3 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((const)); extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 126 "/usr/include/strings.h" 2 3 extern int strcasecmp_l (__const char *__s1, __const char *__s2, __locale_t __loc) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int strncasecmp_l (__const char *__s1, __const char *__s2, size_t __n, __locale_t __loc) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 4))); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sched.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 25 "/usr/include/sched.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/sched.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sched.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 typedef __time_t time_t; # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 35 "/usr/include/sched.h" 2 3 typedef __pid_t pid_t; # 1 "/usr/include/bits/sched.h" 1 3 # 39 "/usr/include/bits/sched.h" 3 # 72 "/usr/include/bits/sched.h" 3 struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) __attribute__ ((__nothrow__)); extern int unshare (int __flags) __attribute__ ((__nothrow__)); extern int sched_getcpu (void) __attribute__ ((__nothrow__)); struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 163 "/usr/include/bits/sched.h" 3 # 182 "/usr/include/bits/sched.h" 3 # 193 "/usr/include/bits/sched.h" 3 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__)); # 44 "/usr/include/sched.h" 2 3 extern int sched_setparam (__pid_t __pid, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_setscheduler (__pid_t __pid, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__)); extern int sched_yield (void) __attribute__ ((__nothrow__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__)); # 125 "/usr/include/sched.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "cxxabi.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "dos.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "WindowsX.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/sysinfo.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 23 "/usr/include/sys/sysinfo.h" 2 3 # 1 "/usr/include/linux/kernel.h" 1 3 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); # 26 "/usr/include/sys/sysinfo.h" 2 3 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__)); extern int get_nprocs (void) __attribute__ ((__nothrow__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/wait.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/sys/wait.h" 2 3 # 1 "/usr/include/signal.h" 1 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 68 "/usr/include/bits/sigset.h" 3 # 100 "/usr/include/bits/sigset.h" 3 extern int __sigismember (__const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); # 117 "/usr/include/bits/sigset.h" 3 extern __inline int __sigismember (__const __sigset_t *__set, int __sig) { unsigned long int __mask = (((unsigned long int) 1) << (((__sig) - 1) % (8 * sizeof (unsigned long int)))); unsigned long int __word = (((__sig) - 1) / (8 * sizeof (unsigned long int))); return (__set->__val[__word] & __mask) ? 1 : 0; } extern __inline int __sigaddset ( __sigset_t *__set, int __sig) { unsigned long int __mask = (((unsigned long int) 1) << (((__sig) - 1) % (8 * sizeof (unsigned long int)))); unsigned long int __word = (((__sig) - 1) / (8 * sizeof (unsigned long int))); return ((__set->__val[__word] |= __mask), 0); } extern __inline int __sigdelset ( __sigset_t *__set, int __sig) { unsigned long int __mask = (((unsigned long int) 1) << (((__sig) - 1) % (8 * sizeof (unsigned long int)))); unsigned long int __word = (((__sig) - 1) / (8 * sizeof (unsigned long int))); return ((__set->__val[__word] &= ~__mask), 0); } # 34 "/usr/include/signal.h" 2 3 typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 58 "/usr/include/signal.h" 2 3 # 1 "/usr/include/bits/signum.h" 1 3 # 68 "/usr/include/bits/signum.h" 3 # 59 "/usr/include/signal.h" 2 3 typedef __pid_t pid_t; typedef __uid_t uid_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 77 "/usr/include/signal.h" 2 3 # 1 "/usr/include/bits/siginfo.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 26 "/usr/include/bits/siginfo.h" 2 3 typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; # 50 "/usr/include/bits/siginfo.h" 3 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; } _sigfault; struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; # 125 "/usr/include/bits/siginfo.h" 3 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; # 272 "/usr/include/bits/siginfo.h" 3 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; # 80 "/usr/include/signal.h" 2 3 typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); extern __sighandler_t signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); # 113 "/usr/include/signal.h" 3 # 121 "/usr/include/signal.h" 3 extern int kill (__pid_t __pid, int __sig) __attribute__ ((__nothrow__)); extern int killpg (__pid_t __pgrp, int __sig) __attribute__ ((__nothrow__)); extern int raise (int __sig) __attribute__ ((__nothrow__)); extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); extern int gsignal (int __sig) __attribute__ ((__nothrow__)); extern void psignal (int __sig, __const char *__s); extern void psiginfo (__const siginfo_t *__pinfo, __const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); # 184 "/usr/include/signal.h" 3 extern int sigblock (int __mask) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int sigsetmask (int __mask) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int siggetmask (void) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); typedef __sighandler_t sig_t; extern int sigemptyset (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigfillset (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigaddset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigdelset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigismember (__const sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 249 "/usr/include/signal.h" 3 # 1 "/usr/include/bits/sigaction.h" 1 3 struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; int sa_flags; void (*sa_restorer) (void); }; # 69 "/usr/include/bits/sigaction.h" 3 # 253 "/usr/include/signal.h" 2 3 extern int sigprocmask (int __how, __const sigset_t *__restrict __set, sigset_t *__restrict __oset) __attribute__ ((__nothrow__)); extern int sigsuspend (__const sigset_t *__set) __attribute__ ((__nonnull__ (1))); extern int sigaction (int __sig, __const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) __attribute__ ((__nothrow__)); extern int sigpending (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigwait (__const sigset_t *__restrict __set, int *__restrict __sig) __attribute__ ((__nonnull__ (1, 2))); extern int sigwaitinfo (__const sigset_t *__restrict __set, siginfo_t *__restrict __info) __attribute__ ((__nonnull__ (1))); extern int sigtimedwait (__const sigset_t *__restrict __set, siginfo_t *__restrict __info, __const struct timespec *__restrict __timeout) __attribute__ ((__nonnull__ (1))); extern int sigqueue (__pid_t __pid, int __sig, __const union sigval __val) __attribute__ ((__nothrow__)); extern __const char *__const _sys_siglist[65]; extern __const char *__const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, __const struct sigvec *__vec, struct sigvec *__ovec) __attribute__ ((__nothrow__)); # 1 "/usr/include/bits/sigcontext.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/bits/sigcontext.h" 2 3 struct _fpreg { unsigned short significand[4]; unsigned short exponent; }; struct _fpxreg { unsigned short significand[4]; unsigned short exponent; unsigned short padding[3]; }; struct _xmmreg { __uint32_t element[4]; }; # 108 "/usr/include/bits/sigcontext.h" 3 struct _fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _fpxreg _st[8]; struct _xmmreg _xmm[16]; __uint32_t padding[24]; }; struct sigcontext { unsigned long r8; unsigned long r9; unsigned long r10; unsigned long r11; unsigned long r12; unsigned long r13; unsigned long r14; unsigned long r15; unsigned long rdi; unsigned long rsi; unsigned long rbp; unsigned long rbx; unsigned long rdx; unsigned long rax; unsigned long rcx; unsigned long rsp; unsigned long rip; unsigned long eflags; unsigned short cs; unsigned short gs; unsigned short fs; unsigned short __pad0; unsigned long err; unsigned long trapno; unsigned long oldmask; unsigned long cr2; struct _fpstate * fpstate; unsigned long __reserved1 [8]; }; # 340 "/usr/include/signal.h" 2 3 extern int sigreturn (struct sigcontext *__scp) __attribute__ ((__nothrow__)); # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 350 "/usr/include/signal.h" 2 3 extern int siginterrupt (int __sig, int __interrupt) __attribute__ ((__nothrow__)); # 1 "/usr/include/bits/sigstack.h" 1 3 struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; # 357 "/usr/include/signal.h" 2 3 # 1 "/usr/include/sys/ucontext.h" 1 3 # 1 "/usr/include/signal.h" 1 3 # 24 "/usr/include/sys/ucontext.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 25 "/usr/include/sys/ucontext.h" 2 3 typedef long int greg_t; typedef greg_t gregset_t[23]; # 93 "/usr/include/sys/ucontext.h" 3 struct _libc_fpxreg { unsigned short int significand[4]; unsigned short int exponent; unsigned short int padding[3]; }; struct _libc_xmmreg { __uint32_t element[4]; }; struct _libc_fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _libc_fpxreg _st[8]; struct _libc_xmmreg _xmm[16]; __uint32_t padding[24]; }; typedef struct _libc_fpstate *fpregset_t; typedef struct { gregset_t gregs; fpregset_t fpregs; unsigned long __reserved1 [8]; } mcontext_t; typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; mcontext_t uc_mcontext; __sigset_t uc_sigmask; struct _libc_fpstate __fpregs_mem; } ucontext_t; # 247 "/usr/include/sys/ucontext.h" 3 # 360 "/usr/include/signal.h" 2 3 extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int sigaltstack (__const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) __attribute__ ((__nothrow__)); # 390 "/usr/include/signal.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 395 "/usr/include/signal.h" 2 3 # 1 "/usr/include/bits/sigthread.h" 1 3 extern int pthread_sigmask (int __how, __const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask)__attribute__ ((__nothrow__)); extern int pthread_kill (pthread_t __threadid, int __signo) __attribute__ ((__nothrow__)); # 396 "/usr/include/signal.h" 2 3 extern int __libc_current_sigrtmin (void) __attribute__ ((__nothrow__)); extern int __libc_current_sigrtmax (void) __attribute__ ((__nothrow__)); # 32 "/usr/include/sys/wait.h" 2 3 # 1 "/usr/include/sys/resource.h" 1 3 # 1 "/usr/include/bits/resource.h" 1 3 enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 6, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; typedef __rlim_t rlim_t; # 134 "/usr/include/bits/resource.h" 3 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; # 152 "/usr/include/bits/resource.h" 3 enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 # 172 "/usr/include/bits/resource.h" 3 }; # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 176 "/usr/include/bits/resource.h" 2 3 struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; # 26 "/usr/include/sys/resource.h" 2 3 typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 65 "/usr/include/sys/resource.h" 3 extern int setrlimit (__rlimit_resource_t __resource, __const struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 85 "/usr/include/sys/resource.h" 3 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) __attribute__ ((__nothrow__)); extern int getpriority (__priority_which_t __which, id_t __who) __attribute__ ((__nothrow__)); extern int setpriority (__priority_which_t __which, id_t __who, int __prio) __attribute__ ((__nothrow__)); # 33 "/usr/include/sys/wait.h" 2 3 # 1 "/usr/include/bits/waitflags.h" 1 3 # 39 "/usr/include/sys/wait.h" 2 3 # 52 "/usr/include/sys/wait.h" 3 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 78 "/usr/include/sys/wait.h" 3 # 1 "/usr/include/bits/waitstatus.h" 1 3 Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 26 "/usr/include/stdlib.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 34 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitflags.h" 1 3 # 43 "/usr/include/stdlib.h" 2 3 # 1 "/usr/include/bits/waitstatus.h" 1 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 66 "/usr/include/bits/waitstatus.h" 2 3 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; # 84 "/usr/include/bits/waitstatus.h" 3 } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; # 97 "/usr/include/bits/waitstatus.h" 3 } __wait_stopped; }; # 44 "/usr/include/stdlib.h" 2 3 # 57 "/usr/include/stdlib.h" 3 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 83 "/usr/include/stdlib.h" 3 # 95 "/usr/include/stdlib.h" 3 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 274 "/usr/include/stdlib.h" 3 extern __inline double __attribute__ ((__nothrow__)) atof (__const char *__nptr) { return strtod (__nptr, (char **) ((void*)0)); } extern __inline int __attribute__ ((__nothrow__)) atoi (__const char *__nptr) { return (int) strtol (__nptr, (char **) ((void*)0), 10); } extern __inline long int __attribute__ ((__nothrow__)) atol (__const char *__nptr) { return strtol (__nptr, (char **) ((void*)0), 10); } __extension__ extern __inline long long int __attribute__ ((__nothrow__)) atoll (__const char *__nptr) { return strtoll (__nptr, (char **) ((void*)0), 10); } extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 321 "/usr/include/stdlib.h" 2 3 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/alloca.h" 2 3 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 531 "/usr/include/stdlib.h" 3 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 554 "/usr/include/stdlib.h" 3 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__)); extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 633 "/usr/include/stdlib.h" 3 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 656 "/usr/include/stdlib.h" 3 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 710 "/usr/include/stdlib.h" 3 extern int system (__const char *__command) ; # 727 "/usr/include/stdlib.h" 3 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 751 "/usr/include/stdlib.h" 3 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 932 "/usr/include/stdlib.h" 3 # 943 "/usr/include/stdlib.h" 3 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 960 "/usr/include/stdlib.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/pthread.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 25 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/sched.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/sched.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sched.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 typedef __time_t time_t; # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 35 "/usr/include/sched.h" 2 3 typedef __pid_t pid_t; # 1 "/usr/include/bits/sched.h" 1 3 # 39 "/usr/include/bits/sched.h" 3 # 72 "/usr/include/bits/sched.h" 3 struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) __attribute__ ((__nothrow__)); extern int unshare (int __flags) __attribute__ ((__nothrow__)); extern int sched_getcpu (void) __attribute__ ((__nothrow__)); struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 163 "/usr/include/bits/sched.h" 3 # 182 "/usr/include/bits/sched.h" 3 # 193 "/usr/include/bits/sched.h" 3 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__)); # 44 "/usr/include/sched.h" 2 3 extern int sched_setparam (__pid_t __pid, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_setscheduler (__pid_t __pid, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__)); extern int sched_yield (void) __attribute__ ((__nothrow__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__)); # 125 "/usr/include/sched.h" 3 # 26 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 39 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 43 "/usr/include/bits/time.h" 3 # 43 "/usr/include/time.h" 2 3 typedef __clock_t clock_t; # 84 "/usr/include/time.h" 3 typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; # 178 "/usr/include/time.h" 3 extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 211 "/usr/include/time.h" 3 # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 401 "/usr/include/time.h" 3 # 416 "/usr/include/time.h" 3 # 27 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 29 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/setjmp.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 28 "/usr/include/bits/setjmp.h" 2 3 typedef long int __jmp_buf[8]; # 30 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 31 "/usr/include/pthread.h" 2 3 enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL }; enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; # 85 "/usr/include/pthread.h" 3 # 111 "/usr/include/pthread.h" 3 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; # 144 "/usr/include/pthread.h" 3 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t *__restrict __newthread, __const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); extern int pthread_join (pthread_t __th, void **__thread_return); # 258 "/usr/include/pthread.h" 3 extern int pthread_detach (pthread_t __th) __attribute__ ((__nothrow__)); extern pthread_t pthread_self (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) __attribute__ ((__nothrow__)); extern int pthread_attr_init (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_destroy (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getdetachstate (__const pthread_attr_t *__attr, int *__detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getguardsize (__const pthread_attr_t *__attr, size_t *__guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getschedparam (__const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, __const struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_getschedpolicy (__const pthread_attr_t *__restrict __attr, int *__restrict __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getinheritsched (__const pthread_attr_t *__restrict __attr, int *__restrict __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getscope (__const pthread_attr_t *__restrict __attr, int *__restrict __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstackaddr (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) __attribute__ ((__deprecated__)); extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)); extern int pthread_attr_getstacksize (__const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstack (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 407 "/usr/include/pthread.h" 3 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))); extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int pthread_setschedprio (pthread_t __target_thread, int __prio) __attribute__ ((__nothrow__)); # 438 "/usr/include/pthread.h" 3 # 447 "/usr/include/pthread.h" 3 # 467 "/usr/include/pthread.h" 3 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; # 641 "/usr/include/pthread.h" 3 # 664 "/usr/include/pthread.h" 3 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; # 676 "/usr/include/pthread.h" 3 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; # 715 "/usr/include/pthread.h" 3 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __attribute__ ((__nothrow__)); extern int pthread_mutex_init (pthread_mutex_t *__mutex, __const pthread_mutexattr_t *__mutexattr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_lock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_getprioceiling (__const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getpshared (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_gettype (__const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprotocol (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprioceiling (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getrobust (__const pthread_mutexattr_t *__attr, int *__robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 865 "/usr/include/pthread.h" 3 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, __const pthread_rwlockattr_t *__restrict __attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getpshared (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getkind_np (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_init (pthread_cond_t *__restrict __cond, __const pthread_condattr_t *__restrict __cond_attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_destroy (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_signal (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_broadcast (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) __attribute__ ((__nonnull__ (1, 2))); Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/setjmp.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/setjmp.h" 2 3 # 1 "/usr/include/bits/setjmp.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 28 "/usr/include/bits/setjmp.h" 2 3 typedef long int __jmp_buf[8]; # 31 "/usr/include/setjmp.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 32 "/usr/include/setjmp.h" 2 3 struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) __attribute__ ((__nothrow__)); extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) __attribute__ ((__nothrow__)); extern int _setjmp (struct __jmp_buf_tag __env[1]) __attribute__ ((__nothrow__)); # 76 "/usr/include/setjmp.h" 3 extern void longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); typedef struct __jmp_buf_tag sigjmp_buf[1]; extern void siglongjmp (sigjmp_buf __env, int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/utsname.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/sys/utsname.h" 2 3 # 1 "/usr/include/bits/utsname.h" 1 3 # 31 "/usr/include/sys/utsname.h" 2 3 # 47 "/usr/include/sys/utsname.h" 3 struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; extern int uname (struct utsname *__name) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 1 3 # 1 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 1 3 # 120 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 3 # 1 "/usr/include/limits.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/limits.h" 2 3 # 115 "/usr/include/limits.h" 3 # 142 "/usr/include/limits.h" 3 # 1 "/usr/include/bits/posix1_lim.h" 1 3 # 151 "/usr/include/bits/posix1_lim.h" 3 # 1 "/usr/include/bits/local_lim.h" 1 3 # 37 "/usr/include/bits/local_lim.h" 3 # 1 "/usr/include/linux/limits.h" 1 3 # 17 "/usr/include/linux/limits.h" 3 # 40 "/usr/include/bits/local_lim.h" 2 3 # 158 "/usr/include/bits/posix1_lim.h" 2 3 # 146 "/usr/include/limits.h" 2 3 # 1 "/usr/include/bits/posix2_lim.h" 1 3 # 87 "/usr/include/bits/posix2_lim.h" 3 # 150 "/usr/include/limits.h" 2 3 # 123 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 2 3 # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 2 3 # 73 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 107 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 131 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/fcntl.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/fcntl.h" 2 3 # 1 "/usr/include/bits/fcntl.h" 1 3 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 26 "/usr/include/bits/fcntl.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/bits/fcntl.h" 2 3 # 48 "/usr/include/bits/fcntl.h" 3 # 58 "/usr/include/bits/fcntl.h" 3 # 74 "/usr/include/bits/fcntl.h" 3 # 85 "/usr/include/bits/fcntl.h" 3 # 103 "/usr/include/bits/fcntl.h" 3 # 115 "/usr/include/bits/fcntl.h" 3 # 125 "/usr/include/bits/fcntl.h" 3 # 146 "/usr/include/bits/fcntl.h" 3 # 153 "/usr/include/bits/fcntl.h" 3 # 164 "/usr/include/bits/fcntl.h" 3 struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; }; # 189 "/usr/include/bits/fcntl.h" 3 # 207 "/usr/include/bits/fcntl.h" 3 # 217 "/usr/include/bits/fcntl.h" 3 # 227 "/usr/include/bits/fcntl.h" 3 # 249 "/usr/include/bits/fcntl.h" 3 # 294 "/usr/include/bits/fcntl.h" 3 # 35 "/usr/include/fcntl.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 41 "/usr/include/fcntl.h" 2 3 # 1 "/usr/include/bits/stat.h" 1 3 # 39 "/usr/include/bits/stat.h" 3 struct stat { __dev_t st_dev; __ino_t st_ino; # 61 "/usr/include/bits/stat.h" 3 __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad0; __dev_t st_rdev; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; # 106 "/usr/include/bits/stat.h" 3 long int __unused[3]; # 115 "/usr/include/bits/stat.h" 3 }; # 173 "/usr/include/bits/stat.h" 3 # 192 "/usr/include/bits/stat.h" 3 # 207 "/usr/include/bits/stat.h" 3 # 42 "/usr/include/fcntl.h" 2 3 # 57 "/usr/include/fcntl.h" 3 # 97 "/usr/include/fcntl.h" 3 # 116 "/usr/include/fcntl.h" 3 extern int fcntl (int __fd, int __cmd, ...); extern int open (__const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (1))); # 143 "/usr/include/fcntl.h" 3 extern int openat (int __fd, __const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (2))); # 170 "/usr/include/fcntl.h" 3 extern int creat (__const char *__file, __mode_t __mode) __attribute__ ((__nonnull__ (1))); # 189 "/usr/include/fcntl.h" 3 extern int lockf (int __fd, int __cmd, __off_t __len); # 218 "/usr/include/fcntl.h" 3 extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) __attribute__ ((__nothrow__)); # 238 "/usr/include/fcntl.h" 3 extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); # 259 "/usr/include/fcntl.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/string.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 35 "/usr/include/string.h" 2 3 extern void *memcpy (void *__restrict __dest, __const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, __const void *__src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, __const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 95 "/usr/include/string.h" 3 extern void *memchr (__const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 124 "/usr/include/string.h" 3 extern char *strcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 163 "/usr/include/string.h" 2 3 extern int strcoll_l (__const char *__s1, __const char *__s2, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, __const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (__const char *__string, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 209 "/usr/include/string.h" 3 # 235 "/usr/include/string.h" 3 extern char *strchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 262 "/usr/include/string.h" 3 extern char *strrchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 280 "/usr/include/string.h" 3 extern size_t strcspn (__const char *__s, __const char *__reject) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 314 "/usr/include/string.h" 3 extern char *strpbrk (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 342 "/usr/include/string.h" 3 extern char *strstr (__const char *__haystack, __const char *__needle) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 377 "/usr/include/string.h" 3 # 395 "/usr/include/string.h" 3 extern size_t strlen (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (__const char *__string, size_t __maxlen) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__)); extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 442 "/usr/include/string.h" 3 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 489 "/usr/include/string.h" 3 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 517 "/usr/include/string.h" 3 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 534 "/usr/include/string.h" 3 extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 555 "/usr/include/string.h" 3 extern char *strsep (char **__restrict __stringp, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__)); extern char *__stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 610 "/usr/include/string.h" 3 # 1 "/usr/include/bits/string.h" 1 3 # 635 "/usr/include/string.h" 2 3 # 1 "/usr/include/bits/string2.h" 1 3 # 638 "/usr/include/string.h" 2 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/times.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/sys/times.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 typedef __clock_t clock_t; # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 30 "/usr/include/sys/times.h" 2 3 struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "io.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/pwd.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/pwd.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/pwd.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 34 "/usr/include/pwd.h" 2 3 typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; # 1 "/usr/include/stdio.h" 1 3 # 40 "/usr/include/stdio.h" 3 struct _IO_FILE; typedef struct _IO_FILE FILE; # 70 "/usr/include/stdio.h" 3 # 941 "/usr/include/stdio.h" 3 # 65 "/usr/include/pwd.h" 2 3 extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (__const struct passwd *__restrict __p, FILE *__restrict __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (__const char *__name); extern int getpwent_r (struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwuid_r (__uid_t __uid, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwnam_r (__const char *__restrict __name, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int fgetpwent_r (FILE *__restrict __stream, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); # 183 "/usr/include/pwd.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 1 3 # 45 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 extern int __libm_flt_rounds (void) ; # 81 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 93 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 103 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 114 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 124 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 135 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 143 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 179 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 193 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 267 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/float.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/param.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 1 3 # 1 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 1 3 # 120 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 3 # 1 "/usr/include/limits.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 28 "/usr/include/limits.h" 2 3 # 115 "/usr/include/limits.h" 3 # 142 "/usr/include/limits.h" 3 # 1 "/usr/include/bits/posix1_lim.h" 1 3 # 151 "/usr/include/bits/posix1_lim.h" 3 # 1 "/usr/include/bits/local_lim.h" 1 3 # 37 "/usr/include/bits/local_lim.h" 3 # 1 "/usr/include/linux/limits.h" 1 3 # 17 "/usr/include/linux/limits.h" 3 # 40 "/usr/include/bits/local_lim.h" 2 3 # 158 "/usr/include/bits/posix1_lim.h" 2 3 # 146 "/usr/include/limits.h" 2 3 # 1 "/usr/include/bits/posix2_lim.h" 1 3 # 87 "/usr/include/bits/posix2_lim.h" 3 # 150 "/usr/include/limits.h" 2 3 # 123 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 2 3 # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 2 3 # 73 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 107 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 131 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 3 # 27 "/usr/include/sys/param.h" 2 3 # 1 "/usr/include/linux/param.h" 1 3 # 1 "/usr/include/asm/param.h" 1 3 # 1 "/usr/include/asm-generic/param.h" 1 3 # 2 "/usr/include/asm/param.h" 2 3 # 5 "/usr/include/linux/param.h" 2 3 # 29 "/usr/include/sys/param.h" 2 3 # 45 "/usr/include/sys/param.h" 3 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 53 "/usr/include/sys/param.h" 2 3 # 72 "/usr/include/sys/param.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/netdb.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/netdb.h" 2 3 # 1 "/usr/include/netinet/in.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 25 "/usr/include/netinet/in.h" 2 3 # 1 "/usr/include/sys/socket.h" 1 3 # 1 "/usr/include/sys/uio.h" 1 3 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 # 200 "/usr/include/sys/types.h" 3 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 25 "/usr/include/sys/uio.h" 2 3 # 1 "/usr/include/bits/uio.h" 1 3 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 93 "/usr/include/sys/uio.h" 3 # 120 "/usr/include/sys/uio.h" 3 # 29 "/usr/include/sys/socket.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sys/socket.h" 2 3 # 1 "/usr/include/bits/socket.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 30 "/usr/include/bits/socket.h" 2 3 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 113 "/usr/include/bits/socket.h" 3 # 154 "/usr/include/bits/socket.h" 3 # 166 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/bits/sockaddr.h" 1 3 typedef unsigned short int sa_family_t; # 172 "/usr/include/bits/socket.h" 2 3 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, # 209 "/usr/include/bits/socket.h" 3 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; # 272 "/usr/include/bits/socket.h" 3 struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 303 "/usr/include/bits/socket.h" 3 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); extern __inline struct cmsghdr * __attribute__ ((__nothrow__)) __cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) { if ((size_t) __cmsg->cmsg_len < sizeof (struct cmsghdr)) return 0; __cmsg = (struct cmsghdr *) ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1))); if ((unsigned char *) (__cmsg + 1) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen) || ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1)) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen))) return 0; return __cmsg; } enum { SCM_RIGHTS = 0x01 }; # 350 "/usr/include/bits/socket.h" 3 # 375 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/asm/socket.h" 1 3 # 1 "/usr/include/asm-generic/socket.h" 1 3 # 1 "/usr/include/asm/sockios.h" 1 3 # 1 "/usr/include/asm-generic/sockios.h" 1 3 # 12 "/usr/include/asm-generic/sockios.h" 3 # 2 "/usr/include/asm/sockios.h" 2 3 # 5 "/usr/include/asm-generic/socket.h" 2 3 # 26 "/usr/include/asm-generic/socket.h" 3 # 35 "/usr/include/asm-generic/socket.h" 3 # 2 "/usr/include/asm/socket.h" 2 3 # 378 "/usr/include/bits/socket.h" 2 3 # 409 "/usr/include/bits/socket.h" 3 struct linger { int l_onoff; int l_linger; }; extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, __const struct timespec *__tmo); # 41 "/usr/include/sys/socket.h" 2 3 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 100 "/usr/include/sys/socket.h" 3 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 225 "/usr/include/sys/socket.h" 3 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 26 "/usr/include/netinet/in.h" 2 3 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/search.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/search.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 27 "/usr/include/search.h" 2 3 # 42 "/usr/include/search.h" 3 extern void insque (void *__elem, void *__prev) __attribute__ ((__nothrow__)); extern void remque (void *__elem) __attribute__ ((__nothrow__)); typedef int (*__compar_fn_t) (__const void *, __const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; extern ENTRY *hsearch (ENTRY __item, ACTION __action) __attribute__ ((__nothrow__)); extern int hcreate (size_t __nel) __attribute__ ((__nothrow__)); extern void hdestroy (void) __attribute__ ((__nothrow__)); # 112 "/usr/include/search.h" 3 typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (__const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (__const void *__key, void *__const *__rootp, __compar_fn_t __compar); extern void *tdelete (__const void *__restrict __key, void **__restrict __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (__const void *__nodep, VISIT __value, int __level); extern void twalk (__const void *__root, __action_fn_t __action); # 161 "/usr/include/search.h" 3 extern void *lfind (__const void *__key, __const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (__const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 1 3 # 43 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 1 3 # 1 "/usr/include/math.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_val.h" 1 3 # 35 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_valf.h" 1 3 # 37 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_vall.h" 1 3 # 38 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/inf.h" 1 3 # 41 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/nan.h" 1 3 # 44 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathdef.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/bits/mathdef.h" 2 3 typedef float float_t; typedef double double_t; # 43 "/usr/include/bits/mathdef.h" 3 # 48 "/usr/include/math.h" 2 3 # 66 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern double acos (double __x) __attribute__ ((__nothrow__)); extern double __acos (double __x) __attribute__ ((__nothrow__)); extern double asin (double __x) __attribute__ ((__nothrow__)); extern double __asin (double __x) __attribute__ ((__nothrow__)); extern double atan (double __x) __attribute__ ((__nothrow__)); extern double __atan (double __x) __attribute__ ((__nothrow__)); extern double atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double __atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double cos (double __x) __attribute__ ((__nothrow__)); extern double __cos (double __x) __attribute__ ((__nothrow__)); extern double sin (double __x) __attribute__ ((__nothrow__)); extern double __sin (double __x) __attribute__ ((__nothrow__)); extern double tan (double __x) __attribute__ ((__nothrow__)); extern double __tan (double __x) __attribute__ ((__nothrow__)); extern double cosh (double __x) __attribute__ ((__nothrow__)); extern double __cosh (double __x) __attribute__ ((__nothrow__)); extern double sinh (double __x) __attribute__ ((__nothrow__)); extern double __sinh (double __x) __attribute__ ((__nothrow__)); extern double tanh (double __x) __attribute__ ((__nothrow__)); extern double __tanh (double __x) __attribute__ ((__nothrow__)); extern double acosh (double __x) __attribute__ ((__nothrow__)); extern double __acosh (double __x) __attribute__ ((__nothrow__)); extern double asinh (double __x) __attribute__ ((__nothrow__)); extern double __asinh (double __x) __attribute__ ((__nothrow__)); extern double atanh (double __x) __attribute__ ((__nothrow__)); extern double __atanh (double __x) __attribute__ ((__nothrow__)); extern double exp (double __x) __attribute__ ((__nothrow__)); extern double __exp (double __x) __attribute__ ((__nothrow__)); extern double frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double __frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double __ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double log (double __x) __attribute__ ((__nothrow__)); extern double __log (double __x) __attribute__ ((__nothrow__)); extern double log10 (double __x) __attribute__ ((__nothrow__)); extern double __log10 (double __x) __attribute__ ((__nothrow__)); extern double modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); extern double __modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern double expm1 (double __x) __attribute__ ((__nothrow__)); extern double __expm1 (double __x) __attribute__ ((__nothrow__)); extern double log1p (double __x) __attribute__ ((__nothrow__)); extern double __log1p (double __x) __attribute__ ((__nothrow__)); extern double logb (double __x) __attribute__ ((__nothrow__)); extern double __logb (double __x) __attribute__ ((__nothrow__)); extern double exp2 (double __x) __attribute__ ((__nothrow__)); extern double __exp2 (double __x) __attribute__ ((__nothrow__)); extern double log2 (double __x) __attribute__ ((__nothrow__)); extern double __log2 (double __x) __attribute__ ((__nothrow__)); extern double pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double __pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double sqrt (double __x) __attribute__ ((__nothrow__)); extern double __sqrt (double __x) __attribute__ ((__nothrow__)); extern double hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double __hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double cbrt (double __x) __attribute__ ((__nothrow__)); extern double __cbrt (double __x) __attribute__ ((__nothrow__)); extern double ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern int __isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double __drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double significand (double __x) __attribute__ ((__nothrow__)); extern double __significand (double __x) __attribute__ ((__nothrow__)); extern double copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double j0 (double) __attribute__ ((__nothrow__)); extern double __j0 (double) __attribute__ ((__nothrow__)); extern double j1 (double) __attribute__ ((__nothrow__)); extern double __j1 (double) __attribute__ ((__nothrow__)); extern double jn (int, double) __attribute__ ((__nothrow__)); extern double __jn (int, double) __attribute__ ((__nothrow__)); extern double y0 (double) __attribute__ ((__nothrow__)); extern double __y0 (double) __attribute__ ((__nothrow__)); extern double y1 (double) __attribute__ ((__nothrow__)); extern double __y1 (double) __attribute__ ((__nothrow__)); extern double yn (int, double) __attribute__ ((__nothrow__)); extern double __yn (int, double) __attribute__ ((__nothrow__)); extern double erf (double) __attribute__ ((__nothrow__)); extern double __erf (double) __attribute__ ((__nothrow__)); extern double erfc (double) __attribute__ ((__nothrow__)); extern double __erfc (double) __attribute__ ((__nothrow__)); extern double lgamma (double) __attribute__ ((__nothrow__)); extern double __lgamma (double) __attribute__ ((__nothrow__)); extern double tgamma (double) __attribute__ ((__nothrow__)); extern double __tgamma (double) __attribute__ ((__nothrow__)); extern double gamma (double) __attribute__ ((__nothrow__)); extern double __gamma (double) __attribute__ ((__nothrow__)); extern double lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double __lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double rint (double __x) __attribute__ ((__nothrow__)); extern double __rint (double __x) __attribute__ ((__nothrow__)); extern double nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double __remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern double __scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogb (double __x) __attribute__ ((__nothrow__)); extern int __ilogb (double __x) __attribute__ ((__nothrow__)); extern double scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double __scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double nearbyint (double __x) __attribute__ ((__nothrow__)); extern double __nearbyint (double __x) __attribute__ ((__nothrow__)); extern double round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern double __remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrint (double __x) __attribute__ ((__nothrow__)); extern long int __lrint (double __x) __attribute__ ((__nothrow__)); extern long long int llrint (double __x) __attribute__ ((__nothrow__)); extern long long int __llrint (double __x) __attribute__ ((__nothrow__)); extern long int lround (double __x) __attribute__ ((__nothrow__)); extern long int __lround (double __x) __attribute__ ((__nothrow__)); extern long long int llround (double __x) __attribute__ ((__nothrow__)); extern long long int __llround (double __x) __attribute__ ((__nothrow__)); extern double fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern int __fpclassify (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbit (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double __fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double scalb (double __x, double __n) __attribute__ ((__nothrow__)); extern double __scalb (double __x, double __n) __attribute__ ((__nothrow__)); # 72 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern float acosf (float __x) __attribute__ ((__nothrow__)); extern float __acosf (float __x) __attribute__ ((__nothrow__)); extern float asinf (float __x) __attribute__ ((__nothrow__)); extern float __asinf (float __x) __attribute__ ((__nothrow__)); extern float atanf (float __x) __attribute__ ((__nothrow__)); extern float __atanf (float __x) __attribute__ ((__nothrow__)); extern float atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float __atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float cosf (float __x) __attribute__ ((__nothrow__)); extern float __cosf (float __x) __attribute__ ((__nothrow__)); extern float sinf (float __x) __attribute__ ((__nothrow__)); extern float __sinf (float __x) __attribute__ ((__nothrow__)); extern float tanf (float __x) __attribute__ ((__nothrow__)); extern float __tanf (float __x) __attribute__ ((__nothrow__)); extern float coshf (float __x) __attribute__ ((__nothrow__)); extern float __coshf (float __x) __attribute__ ((__nothrow__)); extern float sinhf (float __x) __attribute__ ((__nothrow__)); extern float __sinhf (float __x) __attribute__ ((__nothrow__)); extern float tanhf (float __x) __attribute__ ((__nothrow__)); extern float __tanhf (float __x) __attribute__ ((__nothrow__)); extern float acoshf (float __x) __attribute__ ((__nothrow__)); extern float __acoshf (float __x) __attribute__ ((__nothrow__)); extern float asinhf (float __x) __attribute__ ((__nothrow__)); extern float __asinhf (float __x) __attribute__ ((__nothrow__)); extern float atanhf (float __x) __attribute__ ((__nothrow__)); extern float __atanhf (float __x) __attribute__ ((__nothrow__)); extern float expf (float __x) __attribute__ ((__nothrow__)); extern float __expf (float __x) __attribute__ ((__nothrow__)); extern float frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float __frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float __ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float logf (float __x) __attribute__ ((__nothrow__)); extern float __logf (float __x) __attribute__ ((__nothrow__)); extern float log10f (float __x) __attribute__ ((__nothrow__)); extern float __log10f (float __x) __attribute__ ((__nothrow__)); extern float modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); extern float __modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern float expm1f (float __x) __attribute__ ((__nothrow__)); extern float __expm1f (float __x) __attribute__ ((__nothrow__)); extern float log1pf (float __x) __attribute__ ((__nothrow__)); extern float __log1pf (float __x) __attribute__ ((__nothrow__)); extern float logbf (float __x) __attribute__ ((__nothrow__)); extern float __logbf (float __x) __attribute__ ((__nothrow__)); extern float exp2f (float __x) __attribute__ ((__nothrow__)); extern float __exp2f (float __x) __attribute__ ((__nothrow__)); extern float log2f (float __x) __attribute__ ((__nothrow__)); extern float __log2f (float __x) __attribute__ ((__nothrow__)); extern float powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float sqrtf (float __x) __attribute__ ((__nothrow__)); extern float __sqrtf (float __x) __attribute__ ((__nothrow__)); extern float hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float cbrtf (float __x) __attribute__ ((__nothrow__)); extern float __cbrtf (float __x) __attribute__ ((__nothrow__)); extern float ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float significandf (float __x) __attribute__ ((__nothrow__)); extern float __significandf (float __x) __attribute__ ((__nothrow__)); extern float copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float j0f (float) __attribute__ ((__nothrow__)); extern float __j0f (float) __attribute__ ((__nothrow__)); extern float j1f (float) __attribute__ ((__nothrow__)); extern float __j1f (float) __attribute__ ((__nothrow__)); extern float jnf (int, float) __attribute__ ((__nothrow__)); extern float __jnf (int, float) __attribute__ ((__nothrow__)); extern float y0f (float) __attribute__ ((__nothrow__)); extern float __y0f (float) __attribute__ ((__nothrow__)); extern float y1f (float) __attribute__ ((__nothrow__)); extern float __y1f (float) __attribute__ ((__nothrow__)); extern float ynf (int, float) __attribute__ ((__nothrow__)); extern float __ynf (int, float) __attribute__ ((__nothrow__)); extern float erff (float) __attribute__ ((__nothrow__)); extern float __erff (float) __attribute__ ((__nothrow__)); extern float erfcf (float) __attribute__ ((__nothrow__)); extern float __erfcf (float) __attribute__ ((__nothrow__)); extern float lgammaf (float) __attribute__ ((__nothrow__)); extern float __lgammaf (float) __attribute__ ((__nothrow__)); extern float tgammaf (float) __attribute__ ((__nothrow__)); extern float __tgammaf (float) __attribute__ ((__nothrow__)); extern float gammaf (float) __attribute__ ((__nothrow__)); extern float __gammaf (float) __attribute__ ((__nothrow__)); extern float lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float __lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float rintf (float __x) __attribute__ ((__nothrow__)); extern float __rintf (float __x) __attribute__ ((__nothrow__)); extern float nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern float __scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbf (float __x) __attribute__ ((__nothrow__)); extern int __ilogbf (float __x) __attribute__ ((__nothrow__)); extern float scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float __scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float __nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern float __remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintf (float __x) __attribute__ ((__nothrow__)); extern long int __lrintf (float __x) __attribute__ ((__nothrow__)); extern long long int llrintf (float __x) __attribute__ ((__nothrow__)); extern long long int __llrintf (float __x) __attribute__ ((__nothrow__)); extern long int lroundf (float __x) __attribute__ ((__nothrow__)); extern long int __lroundf (float __x) __attribute__ ((__nothrow__)); extern long long int llroundf (float __x) __attribute__ ((__nothrow__)); extern long long int __llroundf (float __x) __attribute__ ((__nothrow__)); extern float fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __fpclassifyf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float __fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float scalbf (float __x, float __n) __attribute__ ((__nothrow__)); extern float __scalbf (float __x, float __n) __attribute__ ((__nothrow__)); # 95 "/usr/include/math.h" 2 3 # 129 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern long double acosl (long double __x) __attribute__ ((__nothrow__)); extern long double __acosl (long double __x) __attribute__ ((__nothrow__)); extern long double asinl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinl (long double __x) __attribute__ ((__nothrow__)); extern long double atanl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanl (long double __x) __attribute__ ((__nothrow__)); extern long double atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double __atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double cosl (long double __x) __attribute__ ((__nothrow__)); extern long double __cosl (long double __x) __attribute__ ((__nothrow__)); extern long double sinl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinl (long double __x) __attribute__ ((__nothrow__)); extern long double tanl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanl (long double __x) __attribute__ ((__nothrow__)); extern long double coshl (long double __x) __attribute__ ((__nothrow__)); extern long double __coshl (long double __x) __attribute__ ((__nothrow__)); extern long double sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double __acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double expl (long double __x) __attribute__ ((__nothrow__)); extern long double __expl (long double __x) __attribute__ ((__nothrow__)); extern long double frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double __frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double __ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double logl (long double __x) __attribute__ ((__nothrow__)); extern long double __logl (long double __x) __attribute__ ((__nothrow__)); extern long double log10l (long double __x) __attribute__ ((__nothrow__)); extern long double __log10l (long double __x) __attribute__ ((__nothrow__)); extern long double modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); extern long double __modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern long double expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double __expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double __log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double logbl (long double __x) __attribute__ ((__nothrow__)); extern long double __logbl (long double __x) __attribute__ ((__nothrow__)); extern long double exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double __exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double log2l (long double __x) __attribute__ ((__nothrow__)); extern long double __log2l (long double __x) __attribute__ ((__nothrow__)); extern long double powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double significandl (long double __x) __attribute__ ((__nothrow__)); extern long double __significandl (long double __x) __attribute__ ((__nothrow__)); extern long double copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double j0l (long double) __attribute__ ((__nothrow__)); extern long double __j0l (long double) __attribute__ ((__nothrow__)); extern long double j1l (long double) __attribute__ ((__nothrow__)); extern long double __j1l (long double) __attribute__ ((__nothrow__)); extern long double jnl (int, long double) __attribute__ ((__nothrow__)); extern long double __jnl (int, long double) __attribute__ ((__nothrow__)); extern long double y0l (long double) __attribute__ ((__nothrow__)); extern long double __y0l (long double) __attribute__ ((__nothrow__)); extern long double y1l (long double) __attribute__ ((__nothrow__)); extern long double __y1l (long double) __attribute__ ((__nothrow__)); extern long double ynl (int, long double) __attribute__ ((__nothrow__)); extern long double __ynl (int, long double) __attribute__ ((__nothrow__)); extern long double erfl (long double) __attribute__ ((__nothrow__)); extern long double __erfl (long double) __attribute__ ((__nothrow__)); extern long double erfcl (long double) __attribute__ ((__nothrow__)); extern long double __erfcl (long double) __attribute__ ((__nothrow__)); extern long double lgammal (long double) __attribute__ ((__nothrow__)); extern long double __lgammal (long double) __attribute__ ((__nothrow__)); extern long double tgammal (long double) __attribute__ ((__nothrow__)); extern long double __tgammal (long double) __attribute__ ((__nothrow__)); extern long double gammal (long double) __attribute__ ((__nothrow__)); extern long double __gammal (long double) __attribute__ ((__nothrow__)); extern long double lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double __lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double rintl (long double __x) __attribute__ ((__nothrow__)); extern long double __rintl (long double __x) __attribute__ ((__nothrow__)); extern long double nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern long double __scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbl (long double __x) __attribute__ ((__nothrow__)); extern int __ilogbl (long double __x) __attribute__ ((__nothrow__)); extern long double scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double __scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double __nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long double __remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintl (long double __x) __attribute__ ((__nothrow__)); extern long int __lrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int llrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llrintl (long double __x) __attribute__ ((__nothrow__)); extern long int lroundl (long double __x) __attribute__ ((__nothrow__)); extern long int __lroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int llroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llroundl (long double __x) __attribute__ ((__nothrow__)); extern long double fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __fpclassifyl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double __fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); extern long double __scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); # 142 "/usr/include/math.h" 2 3 extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; # 223 "/usr/include/math.h" 3 # 235 "/usr/include/math.h" 3 # 247 "/usr/include/math.h" 3 # 263 "/usr/include/math.h" 3 # 275 "/usr/include/math.h" 3 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); # 341 "/usr/include/math.h" 3 # 353 "/usr/include/math.h" 3 # 371 "/usr/include/math.h" 3 # 390 "/usr/include/math.h" 3 # 413 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathinline.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 26 "/usr/include/bits/mathinline.h" 2 3 extern __inline int __attribute__ ((__nothrow__)) __signbitf (float __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x8; } extern __inline int __attribute__ ((__nothrow__)) __signbit (double __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x80; } extern __inline int __attribute__ ((__nothrow__)) __signbitl (long double __x) { __extension__ union { long double __l; int __i[3]; } __u = { __l: __x }; return (__u.__i[2] & 0x8000) != 0; } # 417 "/usr/include/math.h" 2 3 # 429 "/usr/include/math.h" 3 # 437 "/usr/include/math.h" 3 # 445 "/usr/include/math.h" 3 # 453 "/usr/include/math.h" 3 # 461 "/usr/include/math.h" 3 # 469 "/usr/include/math.h" 3 # 20 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 2 3 # 47 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 1 3 # 1 "/usr/include/complex.h" 1 3 # 1 "/usr/include/bits/mathdef.h" 1 3 # 30 "/usr/include/complex.h" 2 3 # 64 "/usr/include/complex.h" 3 # 1 "/usr/include/bits/cmathcalls.h" 1 3 extern double _Complex cacos (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __cacos (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex casin (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __casin (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex catan (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __catan (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex ccos (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __ccos (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex csin (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __csin (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex ctan (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __ctan (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex cacosh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __cacosh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex casinh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __casinh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex catanh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __catanh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex ccosh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __ccosh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex csinh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __csinh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex ctanh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __ctanh (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex cexp (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __cexp (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex clog (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __clog (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex cpow (double _Complex __x, double _Complex __y) __attribute__ ((__nothrow__)); extern double _Complex __cpow (double _Complex __x, double _Complex __y) __attribute__ ((__nothrow__)); extern double _Complex csqrt (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __csqrt (double _Complex __z) __attribute__ ((__nothrow__)); extern double cabs (double _Complex __z) __attribute__ ((__nothrow__)); extern double __cabs (double _Complex __z) __attribute__ ((__nothrow__)); extern double carg (double _Complex __z) __attribute__ ((__nothrow__)); extern double __carg (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex conj (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __conj (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex cproj (double _Complex __z) __attribute__ ((__nothrow__)); extern double _Complex __cproj (double _Complex __z) __attribute__ ((__nothrow__)); extern double cimag (double _Complex __z) __attribute__ ((__nothrow__)); extern double __cimag (double _Complex __z) __attribute__ ((__nothrow__)); extern double creal (double _Complex __z) __attribute__ ((__nothrow__)); extern double __creal (double _Complex __z) __attribute__ ((__nothrow__)); # 68 "/usr/include/complex.h" 2 3 # 1 "/usr/include/bits/cmathcalls.h" 1 3 extern float _Complex cacosf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __cacosf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex casinf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __casinf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex catanf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __catanf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex ccosf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __ccosf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex csinf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __csinf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex ctanf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __ctanf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex cacoshf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __cacoshf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex casinhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __casinhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex catanhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __catanhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex ccoshf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __ccoshf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex csinhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __csinhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex ctanhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __ctanhf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex cexpf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __cexpf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex clogf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __clogf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex cpowf (float _Complex __x, float _Complex __y) __attribute__ ((__nothrow__)); extern float _Complex __cpowf (float _Complex __x, float _Complex __y) __attribute__ ((__nothrow__)); extern float _Complex csqrtf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __csqrtf (float _Complex __z) __attribute__ ((__nothrow__)); extern float cabsf (float _Complex __z) __attribute__ ((__nothrow__)); extern float __cabsf (float _Complex __z) __attribute__ ((__nothrow__)); extern float cargf (float _Complex __z) __attribute__ ((__nothrow__)); extern float __cargf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex conjf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __conjf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex cprojf (float _Complex __z) __attribute__ ((__nothrow__)); extern float _Complex __cprojf (float _Complex __z) __attribute__ ((__nothrow__)); extern float cimagf (float _Complex __z) __attribute__ ((__nothrow__)); extern float __cimagf (float _Complex __z) __attribute__ ((__nothrow__)); extern float crealf (float _Complex __z) __attribute__ ((__nothrow__)); extern float __crealf (float _Complex __z) __attribute__ ((__nothrow__)); # 82 "/usr/include/complex.h" 2 3 # 94 "/usr/include/complex.h" 3 # 1 "/usr/include/bits/cmathcalls.h" 1 3 extern long double _Complex cacosl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __cacosl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex casinl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __casinl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex catanl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __catanl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex ccosl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __ccosl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex csinl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __csinl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex ctanl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __ctanl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex cacoshl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __cacoshl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex casinhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __casinhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex catanhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __catanhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex ccoshl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __ccoshl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex csinhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __csinhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex ctanhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __ctanhl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex cexpl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __cexpl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex clogl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __clogl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex cpowl (long double _Complex __x, long double _Complex __y) __attribute__ ((__nothrow__)); extern long double _Complex __cpowl (long double _Complex __x, long double _Complex __y) __attribute__ ((__nothrow__)); extern long double _Complex csqrtl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __csqrtl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double cabsl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double __cabsl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double cargl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double __cargl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex conjl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __conjl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex cprojl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double _Complex __cprojl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double cimagl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double __cimagl (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double creall (long double _Complex __z) __attribute__ ((__nothrow__)); extern long double __creall (long double _Complex __z) __attribute__ ((__nothrow__)); # 105 "/usr/include/complex.h" 2 3 # 111 "/usr/include/complex.h" 3 # 19 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 2 3 # 55 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 69 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 84 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 111 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 extern double _Complex cis( double __x ); extern float _Complex cisf( float __x ); extern long double _Complex cisl( long double __x ); extern double _Complex cisd( double __x ); extern float _Complex cisdf( float __x ); extern long double _Complex cisdl( long double __x ); # 128 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 extern double _Complex cexp2( double _Complex __z ); extern float _Complex cexp2f( float _Complex __z ); extern long double _Complex cexp2l( long double _Complex __z ); extern double _Complex cexp10( double _Complex __z ); extern float _Complex cexp10f( float _Complex __z ); extern long double _Complex cexp10l( long double _Complex __z ); # 158 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 167 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 extern double _Complex clog2( double _Complex __z ); extern float _Complex clog2f( float _Complex __z ); extern long double _Complex clog2l( long double _Complex __z ); extern double _Complex clog10( double _Complex __z ); extern float _Complex clog10f( float _Complex __z ); extern long double _Complex clog10l( long double _Complex __z ); # 190 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 208 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 234 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 265 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 280 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/complex.h" 3 # 49 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 2 3 # 63 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 87 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 108 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 124 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 135 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 143 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 154 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 186 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 195 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 220 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 # 236 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/mathimf.h" 3 extern int fpclassifyf ( float __x ) ; extern int fpclassify ( double __x ) ; extern int fpclassifyd ( double __x ) ; extern int fpclassifyl ( long double __x ) ; extern int __fpclassifyf ( float __x ) ; extern int __fpclassify ( double __x ) ; extern int __fpclassifyd ( double __x ) ; extern int __fpclassifyl ( long double __x ) ; extern int isinff ( float __x ) ; extern int isinf ( double __x ) ; extern int isinfd ( double __x ) ; extern int isinfl ( long double __x ) ; extern int __isinff ( float __x ) ; extern int __isinf ( double __x ) ; extern int __isinfd ( double __x ) ; extern int __isinfl ( long double __x ) ; extern int isnanf ( float __x ) ; extern int isnan ( double __x ) ; extern int isnand ( double __x ) ; extern int isnanl ( long double __x ) ; extern int __isnanf ( float __x ) ; extern int __isnan ( double __x ) ; extern int __isnand ( double __x ) ; extern int __isnanl ( long double __x ) ; extern int isnormalf ( float __x ) ; extern int isnormal ( double __x ) ; extern int isnormald ( double __x ) ; extern int isnormall ( long double __x ) ; extern int __isnormalf ( float __x ) ; extern int __isnormal ( double __x ) ; extern int __isnormald ( double __x ) ; extern int __isnormall ( long double __x ) ; extern int isfinitef ( float __x ) ; extern int isfinite ( double __x ) ; extern int isfinited ( double __x ) ; extern int isfinitel ( long double __x ) ; extern int __isfinitef ( float __x ) ; extern int __isfinite ( double __x ) ; extern int __isfinited ( double __x ) ; extern int __isfinitel ( long double __x ) ; extern int finitef ( float __x ) ; extern int finite ( double __x ) ; extern int finited ( double __x ) ; extern int finitel ( long double __x ) ; extern int __finitef ( float __x ) ; extern int __finite ( double __x ) ; extern int __finited ( double __x ) ; Defined "HAVE_MATHIMF_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/procfs.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 32 "/usr/include/sys/procfs.h" 2 3 # 1 "/usr/include/sys/time.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 typedef __time_t time_t; # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 28 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 30 "/usr/include/sys/time.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 32 "/usr/include/sys/time.h" 2 3 # 52 "/usr/include/sys/time.h" 3 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (__const struct timeval *__tv, __const struct timezone *__tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int adjtime (__const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__)); extern int setitimer (__itimer_which_t __which, __const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__)); extern int utimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)); # 159 "/usr/include/sys/time.h" 3 # 190 "/usr/include/sys/time.h" 3 # 33 "/usr/include/sys/procfs.h" 2 3 # 1 "/usr/include/sys/types.h" 1 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; # 84 "/usr/include/time.h" 3 typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 34 "/usr/include/sys/procfs.h" 2 3 # 1 "/usr/include/sys/user.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/sys/user.h" 2 3 struct user_fpregs_struct { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; __uint32_t st_space[32]; __uint32_t xmm_space[64]; __uint32_t padding[24]; }; struct user_regs_struct { unsigned long r15; unsigned long r14; unsigned long r13; unsigned long r12; unsigned long rbp; unsigned long rbx; unsigned long r11; unsigned long r10; unsigned long r9; unsigned long r8; unsigned long rax; unsigned long rcx; unsigned long rdx; unsigned long rsi; unsigned long rdi; unsigned long orig_rax; unsigned long rip; unsigned long cs; unsigned long eflags; unsigned long rsp; unsigned long ss; unsigned long fs_base; unsigned long gs_base; unsigned long ds; unsigned long es; unsigned long fs; unsigned long gs; }; struct user { struct user_regs_struct regs; int u_fpvalid; struct user_fpregs_struct i387; unsigned long int u_tsize; unsigned long int u_dsize; unsigned long int u_ssize; unsigned long start_code; unsigned long start_stack; long int signal; int reserved; struct user_regs_struct* u_ar0; struct user_fpregs_struct* u_fpstate; unsigned long int magic; char u_comm [32]; unsigned long int u_debugreg [8]; }; # 166 "/usr/include/sys/user.h" 3 # 174 "/usr/include/sys/user.h" 3 # 35 "/usr/include/sys/procfs.h" 2 3 typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[(sizeof (struct user_regs_struct) / sizeof(elf_greg_t))]; # 57 "/usr/include/sys/procfs.h" 3 typedef struct user_fpregs_struct elf_fpregset_t; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/resource.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 23 "/usr/include/sys/resource.h" 2 3 # 1 "/usr/include/bits/resource.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/bits/resource.h" 2 3 enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 6, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; typedef __rlim_t rlim_t; # 134 "/usr/include/bits/resource.h" 3 struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; # 152 "/usr/include/bits/resource.h" 3 enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 # 172 "/usr/include/bits/resource.h" 3 }; # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 176 "/usr/include/bits/resource.h" 2 3 struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; # 26 "/usr/include/sys/resource.h" 2 3 typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 65 "/usr/include/sys/resource.h" 3 extern int setrlimit (__rlimit_resource_t __resource, __const struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 85 "/usr/include/sys/resource.h" 3 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) __attribute__ ((__nothrow__)); extern int getpriority (__priority_which_t __which, id_t __who) __attribute__ ((__nothrow__)); extern int setpriority (__priority_which_t __which, id_t __who, int __prio) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/unistd.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/unistd.h" 2 3 # 49 "/usr/include/unistd.h" 3 # 66 "/usr/include/unistd.h" 3 # 96 "/usr/include/unistd.h" 3 # 1 "/usr/include/bits/posix_opt.h" 1 3 # 204 "/usr/include/unistd.h" 2 3 # 1 "/usr/include/bits/environments.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/environments.h" 2 3 # 91 "/usr/include/bits/environments.h" 3 # 208 "/usr/include/unistd.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 219 "/usr/include/unistd.h" 2 3 typedef __ssize_t ssize_t; # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 228 "/usr/include/unistd.h" 2 3 typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; # 254 "/usr/include/unistd.h" 3 typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; extern int access (__const char *__name, int __type) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 300 "/usr/include/unistd.h" 3 extern int faccessat (int __fd, __const char *__file, int __type, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern __off_t lseek (int __fd, __off_t __offset, int __whence) __attribute__ ((__nothrow__)); # 345 "/usr/include/unistd.h" 3 extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, __const void *__buf, size_t __n) ; extern ssize_t pread (int __fd, void *__buf, size_t __nbytes, __off_t __offset) ; extern ssize_t pwrite (int __fd, __const void *__buf, size_t __n, __off_t __offset) ; # 396 "/usr/include/unistd.h" 3 # 409 "/usr/include/unistd.h" 3 extern int pipe (int __pipedes[2]) __attribute__ ((__nothrow__)) ; extern unsigned int alarm (unsigned int __seconds) __attribute__ ((__nothrow__)); extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) __attribute__ ((__nothrow__)); extern int usleep (__useconds_t __useconds); extern int pause (void); extern int chown (__const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) ; extern int lchown (__const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchownat (int __fd, __const char *__file, __uid_t __owner, __gid_t __group, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern int chdir (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchdir (int __fd) __attribute__ ((__nothrow__)) ; extern char *getcwd (char *__buf, size_t __size) __attribute__ ((__nothrow__)) ; # 516 "/usr/include/unistd.h" 3 extern char *getwd (char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)) ; extern int dup (int __fd) __attribute__ ((__nothrow__)) ; extern int dup2 (int __fd, int __fd2) __attribute__ ((__nothrow__)); extern char **__environ; extern int execve (__const char *__path, char *__const __argv[], char *__const __envp[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int fexecve (int __fd, char *__const __argv[], char *__const __envp[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int execv (__const char *__path, char *__const __argv[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int execle (__const char *__path, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int execl (__const char *__path, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int execvp (__const char *__file, char *__const __argv[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int execlp (__const char *__file, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 591 "/usr/include/unistd.h" 3 extern int nice (int __inc) __attribute__ ((__nothrow__)) ; extern void _exit (int __status) __attribute__ ((__noreturn__)); # 1 "/usr/include/bits/confname.h" 1 3 enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, _SC_SS_REPL_MAX, _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, _SC_XOPEN_STREAMS, _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_V5_WIDTH_RESTRICTED_ENVS, _CS_V7_WIDTH_RESTRICTED_ENVS, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS, _CS_V6_ENV, _CS_V7_ENV }; # 607 "/usr/include/unistd.h" 2 3 extern long int pathconf (__const char *__path, int __name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int fpathconf (int __fd, int __name) __attribute__ ((__nothrow__)); extern long int sysconf (int __name) __attribute__ ((__nothrow__)); extern size_t confstr (int __name, char *__buf, size_t __len) __attribute__ ((__nothrow__)); extern __pid_t getpid (void) __attribute__ ((__nothrow__)); extern __pid_t getppid (void) __attribute__ ((__nothrow__)); extern __pid_t getpgrp (void) __attribute__ ((__nothrow__)); # 641 "/usr/include/unistd.h" 3 extern __pid_t __getpgid (__pid_t __pid) __attribute__ ((__nothrow__)); extern __pid_t getpgid (__pid_t __pid) __attribute__ ((__nothrow__)); extern int setpgid (__pid_t __pid, __pid_t __pgid) __attribute__ ((__nothrow__)); extern int setpgrp (void) __attribute__ ((__nothrow__)); # 682 "/usr/include/unistd.h" 3 extern __pid_t setsid (void) __attribute__ ((__nothrow__)); extern __pid_t getsid (__pid_t __pid) __attribute__ ((__nothrow__)); extern __uid_t getuid (void) __attribute__ ((__nothrow__)); extern __uid_t geteuid (void) __attribute__ ((__nothrow__)); extern __gid_t getgid (void) __attribute__ ((__nothrow__)); extern __gid_t getegid (void) __attribute__ ((__nothrow__)); extern int getgroups (int __size, __gid_t __list[]) __attribute__ ((__nothrow__)) ; extern int setuid (__uid_t __uid) __attribute__ ((__nothrow__)); extern int setreuid (__uid_t __ruid, __uid_t __euid) __attribute__ ((__nothrow__)); extern int seteuid (__uid_t __uid) __attribute__ ((__nothrow__)); extern int setgid (__gid_t __gid) __attribute__ ((__nothrow__)); extern int setregid (__gid_t __rgid, __gid_t __egid) __attribute__ ((__nothrow__)); extern int setegid (__gid_t __gid) __attribute__ ((__nothrow__)); # 770 "/usr/include/unistd.h" 3 extern __pid_t fork (void) __attribute__ ((__nothrow__)); extern __pid_t vfork (void) __attribute__ ((__nothrow__)); extern char *ttyname (int __fd) __attribute__ ((__nothrow__)); extern int ttyname_r (int __fd, char *__buf, size_t __buflen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern int isatty (int __fd) __attribute__ ((__nothrow__)); extern int ttyslot (void) __attribute__ ((__nothrow__)); extern int link (__const char *__from, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int linkat (int __fromfd, __const char *__from, int __tofd, __const char *__to, int __flags) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))) ; extern int symlink (__const char *__from, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern ssize_t readlink (__const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int symlinkat (__const char *__from, int __tofd, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))) ; extern ssize_t readlinkat (int __fd, __const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))) ; extern int unlink (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int unlinkat (int __fd, __const char *__name, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int rmdir (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern __pid_t tcgetpgrp (int __fd) __attribute__ ((__nothrow__)); extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) __attribute__ ((__nothrow__)); extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) __attribute__ ((__nonnull__ (1))); extern int setlogin (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 1 "/usr/include/getopt.h" 1 3 # 48 "/usr/include/getopt.h" 3 extern char *optarg; extern int optind; extern int opterr; extern int optopt; # 122 "/usr/include/getopt.h" 3 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) __attribute__ ((__nothrow__)); # 173 "/usr/include/getopt.h" 3 # 185 "/usr/include/getopt.h" 3 # 891 "/usr/include/unistd.h" 2 3 extern int gethostname (char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sethostname (__const char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int sethostid (long int __id) __attribute__ ((__nothrow__)) ; extern int getdomainname (char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int setdomainname (__const char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int vhangup (void) __attribute__ ((__nothrow__)); extern int revoke (__const char *__file) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int acct (__const char *__name) __attribute__ ((__nothrow__)); extern char *getusershell (void) __attribute__ ((__nothrow__)); extern void endusershell (void) __attribute__ ((__nothrow__)); extern void setusershell (void) __attribute__ ((__nothrow__)); extern int daemon (int __nochdir, int __noclose) __attribute__ ((__nothrow__)) ; extern int chroot (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *getpass (__const char *__prompt) __attribute__ ((__nonnull__ (1))); extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) __attribute__ ((__nothrow__)); extern int getpagesize (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int getdtablesize (void) __attribute__ ((__nothrow__)); extern int truncate (__const char *__file, __off_t __length) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 1022 "/usr/include/unistd.h" 3 extern int ftruncate (int __fd, __off_t __length) __attribute__ ((__nothrow__)) ; # 1038 "/usr/include/unistd.h" 3 extern int brk (void *__addr) __attribute__ ((__nothrow__)) ; extern void *sbrk (intptr_t __delta) __attribute__ ((__nothrow__)); extern long int syscall (long int __sysno, ...) __attribute__ ((__nothrow__)); extern int lockf (int __fd, int __cmd, __off_t __len) ; # 1104 "/usr/include/unistd.h" 3 # 1118 "/usr/include/unistd.h" 3 extern int fdatasync (int __fildes); # 1145 "/usr/include/unistd.h" 3 extern char *ctermid (char *__s) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/netinet/in.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/netinet/in.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 25 "/usr/include/netinet/in.h" 2 3 # 1 "/usr/include/sys/socket.h" 1 3 # 1 "/usr/include/sys/uio.h" 1 3 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 # 200 "/usr/include/sys/types.h" 3 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 25 "/usr/include/sys/uio.h" 2 3 # 1 "/usr/include/bits/uio.h" 1 3 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 93 "/usr/include/sys/uio.h" 3 # 120 "/usr/include/sys/uio.h" 3 # 29 "/usr/include/sys/socket.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sys/socket.h" 2 3 # 1 "/usr/include/bits/socket.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 30 "/usr/include/bits/socket.h" 2 3 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 113 "/usr/include/bits/socket.h" 3 # 154 "/usr/include/bits/socket.h" 3 # 166 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/bits/sockaddr.h" 1 3 typedef unsigned short int sa_family_t; # 172 "/usr/include/bits/socket.h" 2 3 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, # 209 "/usr/include/bits/socket.h" 3 MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; # 272 "/usr/include/bits/socket.h" 3 struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 303 "/usr/include/bits/socket.h" 3 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); extern __inline struct cmsghdr * __attribute__ ((__nothrow__)) __cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) { if ((size_t) __cmsg->cmsg_len < sizeof (struct cmsghdr)) return 0; __cmsg = (struct cmsghdr *) ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1))); if ((unsigned char *) (__cmsg + 1) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen) || ((unsigned char *) __cmsg + (((__cmsg->cmsg_len) + sizeof (size_t) - 1) & (size_t) ~(sizeof (size_t) - 1)) > ((unsigned char *) __mhdr->msg_control + __mhdr->msg_controllen))) return 0; return __cmsg; } enum { SCM_RIGHTS = 0x01 }; # 350 "/usr/include/bits/socket.h" 3 # 375 "/usr/include/bits/socket.h" 3 # 1 "/usr/include/asm/socket.h" 1 3 # 1 "/usr/include/asm-generic/socket.h" 1 3 # 1 "/usr/include/asm/sockios.h" 1 3 # 1 "/usr/include/asm-generic/sockios.h" 1 3 # 12 "/usr/include/asm-generic/sockios.h" 3 # 2 "/usr/include/asm/sockios.h" 2 3 # 5 "/usr/include/asm-generic/socket.h" 2 3 # 26 "/usr/include/asm-generic/socket.h" 3 # 35 "/usr/include/asm-generic/socket.h" 3 # 2 "/usr/include/asm/socket.h" 2 3 # 378 "/usr/include/bits/socket.h" 2 3 # 409 "/usr/include/bits/socket.h" 3 struct linger { int l_onoff; int l_linger; }; extern int recvmmsg (int __fd, struct mmsghdr *__vmessages, unsigned int __vlen, int __flags, __const struct timespec *__tmo); # 41 "/usr/include/sys/socket.h" 2 3 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 100 "/usr/include/sys/socket.h" 3 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 225 "/usr/include/sys/socket.h" 3 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 26 "/usr/include/netinet/in.h" 2 3 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from PETSc.utilities.cacheDetails(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from PETSc.utilities.cacheDetails(config/PETSc/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Defined "LEVEL1_DCACHE_LINESIZE" to "32" Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST checkMemcmp from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:109) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:109) Check for 8-bit clean memcmp ================================================================================ TEST checkSysinfo from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:133) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:133) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.functions Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/linux/kernel.h" 1 3 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/sys/sysinfo.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 23 "/usr/include/sys/sysinfo.h" 2 3 # 1 "/usr/include/linux/kernel.h" 1 3 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; struct module; void mark_hardware_unsupported(const char *msg); void mark_tech_preview(const char *msg, struct module *mod); # 26 "/usr/include/sys/sysinfo.h" 2 3 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__)); extern int get_nprocs (void) __attribute__ ((__nothrow__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c(13): error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:156) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:156) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for functions [vprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vprintf) || defined (__stub___vprintf) vprintf_will_always_fail_with_ENOSYS(); #else vprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_VPRINTF" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) ================================================================================ TEST checkVFPrintf from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:163) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:163) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for functions [vfprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vfprintf) || defined (__stub___vfprintf) vfprintf_will_always_fail_with_ENOSYS(); #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_VFPRINTF" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) ================================================================================ TEST checkVSNPrintf from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:170) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:170) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Checking for functions [_vsnprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) _vsnprintf_will_always_fail_with_ENOSYS(); #else _vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_vsnprintf' Checking for functions [vsnprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) vsnprintf_will_always_fail_with_ENOSYS(); #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_VSNPRINTF" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) ================================================================================ TEST checkNanosleep from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:214) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:214) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:190) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:190) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:200) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:200) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c(6): error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:206) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:206) Checks whether the variable argument list functionality is working Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/functions.py:88) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:88) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _sleep snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _access lseek usleep dlclose gethostname clock get_nprocs access _snprintf dlerror mkstemp fork getpagesize sbreak memalign sigset getcwd gethostbyname gettimeofday readlink _set_output_format PXFGETARG sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time sysctlbyname stricmp] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _sleep(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _access(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char access(); char _snprintf(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); char sbreak(); char memalign(); char sigset(); char getcwd(); char gethostbyname(); char gettimeofday(); char readlink(); char _set_output_format(); char PXFGETARG(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); char sysctlbyname(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x20): undefined reference to `_sleep' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x3f): undefined reference to `_getcwd' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x54): undefined reference to `_lseek' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x60): undefined reference to `_access' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x92): undefined reference to `_snprintf' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0xaf): undefined reference to `sbreak' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0xda): undefined reference to `_set_output_format' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0xe1): undefined reference to `PXFGETARG' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x120): undefined reference to `sysctlbyname' /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x127): undefined reference to `stricmp' Checking for functions [rand getdomainname realpath dlsym bzero getwd uname usleep dlclose gethostname clock get_nprocs dlerror mkstemp fork getpagesize] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char getwd(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_GETWD" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_GET_NPROCS" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_MKSTEMP" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Checking for functions [memalign sigset gethostbyname gettimeofday readlink sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char sigset(); char gethostbyname(); char gettimeofday(); char readlink(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_SIGSET" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_GETTIMEOFDAY" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SIGACTION" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_MEMMOVE" to "1" Defined "HAVE_SIGNAL" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIMES" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_sleep] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_sleep' Checking for functions [snprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_getcwd' Checking for functions [_lseek] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_lseek' Checking for functions [sleep] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_SLEEP" to "1" Checking for functions [_access] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_access' Checking for functions [lseek] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_LSEEK" to "1" Checking for functions [access] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_snprintf' Checking for functions [sbreak] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `sbreak' Checking for functions [getcwd] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `_set_output_format' Checking for functions [PXFGETARG] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `PXFGETARG' Checking for functions [sysctlbyname] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `sysctlbyname' Checking for functions [stricmp] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c:(.text+0x14): undefined reference to `stricmp' ================================================================================ TEST configureMemorySize from PETSc.utilities.getResidentSetSize(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from PETSc.utilities.getResidentSetSize(config/PETSc/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage ================================================================================ TEST configureFeatureTestMacros from PETSc.utilities.featureTestMacros(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from PETSc.utilities.featureTestMacros(config/PETSc/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.c(4): catastrophic error: cannot open source file "sysctl.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureFPTrap from PETSc.utilities.FPTrap(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/FPTrap.py:27) TESTING: configureFPTrap from PETSc.utilities.FPTrap(config/PETSc/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "sigfpe.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: fpxcp.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "fpxcp.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: floatingpoint.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "floatingpoint.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check_siginfo_t from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.types Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found Defined "HAVE___INT64" to "1" ================================================================================ TEST checkSizeTypes from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/sys/types.h" 2 3 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 59 "/usr/include/sys/types.h" 3 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 97 "/usr/include/sys/types.h" 3 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 # 420 "/usr/include/time.h" 3 # 134 "/usr/include/sys/types.h" 2 3 # 145 "/usr/include/sys/types.h" 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 148 "/usr/include/sys/types.h" 2 3 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 186 "/usr/include/sys/types.h" 3 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 218 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/select.h" 1 3 # 1 "/usr/include/bits/select.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/select.h" 2 3 # 44 "/usr/include/bits/select.h" 3 # 58 "/usr/include/bits/select.h" 3 # 32 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/sigset.h" 1 3 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 # 84 "/usr/include/time.h" 3 # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 45 "/usr/include/sys/select.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 66 "/usr/include/bits/time.h" 3 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 # 1 "/usr/include/sys/sysmacros.h" 1 3 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_major (unsigned long long int __dev) { return ((__dev >> 8) & 0xfff) | ((unsigned int) (__dev >> 32) & ~0xfff); } __extension__ extern __inline unsigned int __attribute__ ((__nothrow__)) gnu_dev_minor (unsigned long long int __dev) { return (__dev & 0xff) | ((unsigned int) (__dev >> 12) & ~0xff); } __extension__ extern __inline unsigned long long int __attribute__ ((__nothrow__)) gnu_dev_makedev (unsigned int __major, unsigned int __minor) { return ((__minor & 0xff) | ((__major & 0xfff) << 8) | (((unsigned long long int) (__minor & ~0xff)) << 12) | (((unsigned long long int) (__major & ~0xfff)) << 32)); } # 224 "/usr/include/sys/types.h" 2 3 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 261 "/usr/include/sys/types.h" 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 272 "/usr/include/sys/types.h" 2 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c" 2 ================================================================================ TEST checkSignal from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:117) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:117) Check for complex numbers in namespace std Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:138) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:138) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.F Successful compile: Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkFortranDReal from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:150) TESTING: checkFortranDReal from config.types(config/BuildSystem/config/types.py:150) Checks whether dreal is provided in Fortran, and if not defines MISSING_DREAL Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.F Possible ERROR while running compiler: stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.F(3): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [DREAL] d = dreal(3.0) ----------------^ Source: program main double precision d d = dreal(3.0) end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC ================================================================================ TEST checkConst from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:158) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:158) Checks for working const, and if not found defines it to empty string Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:214) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:214) If the machine is big endian, defines WORDS_BIGENDIAN Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if !BYTE_ORDER || !BIG_ENDIAN || !LITTLE_ENDIAN bogus endian macros #endif ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c(11): error: identifier "not" is undefined not big endian ^ /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c(11): error: expected a ";" not big endian ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if BYTE_ORDER != BIG_ENDIAN not big endian #endif ; return 0; } ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:267) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:267) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:318) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:318) Determine the nubmer of bits per byte and define BITS_PER_BYTE Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/types.py:364) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:364) ================================================================================ TEST configureMemAlign from PETSc.utilities.memAlign(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/memAlign.py:30) TESTING: configureMemAlign from PETSc.utilities.memAlign(config/PETSc/utilities/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST configureCHUD from PETSc.utilities.CHUD(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/CHUD.py:25) TESTING: configureCHUD from PETSc.utilities.CHUD(config/PETSc/utilities/CHUD.py:25) Determines if the Apple CHUD hardware monitoring utilities are available Executing: uname -s stdout: Linux ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lsocket -lnsl -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lfpe -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lfpe Popping language C ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lsocket -lnsl -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lfpe -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lfpe Popping language C ================================================================================ TEST checkMath from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:251) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:251) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); static void _check_sin() { double x = 0,y; y = sin(x); ; } double floor(double); static void _check_floor() { double x = 0,y; y = floor(x); ; } double log10(double); static void _check_log10() { double x = 0,y; y = log10(x); ; } double pow(double, double); static void _check_pow() { double x = 0,y ; y = pow(x, x); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:267) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:267) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); static void _check_erf() { double x = 0,y; y = erf(x); ; } int main() { _check_erf();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:276) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:276) Check for tgama() in libm, the math library Checking for functions [tgamma] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); static void _check_tgamma() { double x = 0,y; y = tgamma(x); ; } int main() { _check_tgamma();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:285) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:285) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkCompression from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:293) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:293) Check for libz, the compression library Checking for functions [compress uncompress] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x2a): undefined reference to `compress' /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x41): undefined reference to `uncompress' Popping language C Checking for functions [compress uncompress] in library ['z'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lz -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lz Popping language C Checking for functions [compress uncompress] in library ['zlib.lib'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o zlib.lib -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: icc: error #10236: File not found: 'zlib.lib' Popping language C Warning: No compression library found ================================================================================ TEST checkRealtime from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:314) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:314) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:330) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:330) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBDL" to "1" Popping language C Checking for header: dlfcn.h Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/dlfcn.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/dlfcn.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 26 "/usr/include/dlfcn.h" 2 3 # 1 "/usr/include/bits/dlfcn.h" 1 3 # 29 "/usr/include/dlfcn.h" 2 3 # 51 "/usr/include/dlfcn.h" 3 extern void *dlopen (__const char *__file, int __mode) __attribute__ ((__nothrow__)); extern int dlclose (void *__handle) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void *dlsym (void *__restrict __handle, __const char *__restrict __name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 79 "/usr/include/dlfcn.h" 3 extern char *dlerror (void) __attribute__ ((__nothrow__)); # 187 "/usr/include/dlfcn.h" 3 # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Defined "HAVE_DLFCN_H" to "1" ================================================================================ TEST configureMissingDefines from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:39) TESTING: configureMissingDefines from PETSc.utilities.missing(config/PETSc/utilities/missing.py:39) Checks for limits All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:49) TESTING: configureMissingUtypeTypedefs from PETSc.utilities.missing(config/PETSc/utilities/missing.py:49) Checks if u_short is undefined Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:55) TESTING: configureMissingFunctions from PETSc.utilities.missing(config/PETSc/utilities/missing.py:55) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:75) TESTING: configureMissingSignals from PETSc.utilities.missing(config/PETSc/utilities/missing.py:75) Check for missing signals, and define MISSING_ if necessary Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:92) TESTING: configureMissingGetdomainnamePrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:92) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #define _GNU_SOURCE #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.cc Possible ERROR while running compiler: stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.cc(4): warning #47: incompatible redefinition of macro "_GNU_SOURCE" #define _GNU_SOURCE ^ Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #define _GNU_SOURCE #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from PETSc.utilities.missing(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/missing.py:117) TESTING: configureMissingSrandPrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:117) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #define _GNU_SOURCE #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.cc Possible ERROR while running compiler: stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.cc(4): warning #47: incompatible redefinition of macro "_GNU_SOURCE" #define _GNU_SOURCE ^ Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #define _GNU_SOURCE #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language Cxx ================================================================================ TEST configureFortranCommandLine from PETSc.utilities.fortranCommandLine(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from PETSc.utilities.fortranCommandLine(config/PETSc/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for functions [] in library [''] [] Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.F Successful compile: Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for functions [get_command_argument_] in library [''] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); static void _check_get_command_argument_() { get_command_argument_(); } int main() { _check_get_command_argument_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `get_command_argument_' Popping language C Checking for functions [getarg_] in library [''] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); static void _check_getarg_() { getarg_(); } int main() { _check_getarg_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_GETARG" to "1" Checking for functions [ipxfargc_] Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) ipxfargc__will_always_fail_with_ENOSYS(); #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.functions/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_IPXFARGC_" to "1" Defined "HAVE_PXFGETARG_NEW" to "1" Popping language C ================================================================================ TEST configureCPURelax from config.atomics(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Defined "CPU_RELAX()" to "asm volatile("rep; nop" ::: "memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: /global/scratch2/sd/madams/iccHToAftas_.s: Assembler messages: /global/scratch2/sd/madams/iccHToAftas_.s:21: Error: `mfence' is not supported on `k1om' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: /global/scratch2/sd/madams/iccCRWTtUas_.s: Assembler messages: /global/scratch2/sd/madams/iccCRWTtUas_.s:21: Error: `lfence' is not supported on `k1om' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: /global/scratch2/sd/madams/iccIiwQIias_.s: Assembler messages: /global/scratch2/sd/madams/iccIiwQIias_.s:21: Error: `sfence' is not supported on `k1om' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } ================================================================================ TEST configureMkdir from config.programs(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mkdir...not found Checking for program /global/homes/m/madams/git-fat/mkdir...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mkdir...not found Checking for program /usr/common/usg/bin/mkdir...not found Checking for program /usr/common/mss/bin/mkdir...not found Checking for program /usr/common/nsg/bin/mkdir...not found Checking for program /usr/lib64/qt-3.3/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/mkdir...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mkdir...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/mkdir...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/mkdir...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/mkdir...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/mkdir...not found Checking for program /usr/syscom/nsg/sbin/mkdir...not found Checking for program /usr/syscom/nsg/bin/mkdir...not found Checking for program /usr/share/Modules/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/autoreconf...not found Checking for program /global/homes/m/madams/git-fat/autoreconf...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/autoreconf...not found Checking for program /usr/common/usg/bin/autoreconf...not found Checking for program /usr/common/mss/bin/autoreconf...not found Checking for program /usr/common/nsg/bin/autoreconf...not found Checking for program /usr/lib64/qt-3.3/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/autoreconf...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/autoreconf...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/autoreconf...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/autoreconf...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/autoreconf...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/autoreconf...not found Checking for program /usr/syscom/nsg/sbin/autoreconf...not found Checking for program /usr/syscom/nsg/bin/autoreconf...not found Checking for program /usr/share/Modules/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.programs Executing: cd /global/scratch2/sd/madams/petsc-T9Q01S/config.programs/autoconfdir&&/usr/bin/autoreconf autoreconf test successful! ================================================================================ TEST configurePrograms from config.programs(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/programs.py:66) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:66) Check for the programs needed to build and run PETSc Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/sh...not found Checking for program /global/homes/m/madams/git-fat/sh...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/sh...not found Checking for program /usr/common/usg/bin/sh...not found Checking for program /usr/common/mss/bin/sh...not found Checking for program /usr/common/nsg/bin/sh...not found Checking for program /usr/lib64/qt-3.3/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/sh...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/sh...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/sh...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/sh...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/sh...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/sh...not found Checking for program /usr/syscom/nsg/sbin/sh...not found Checking for program /usr/syscom/nsg/bin/sh...not found Checking for program /usr/share/Modules/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/sed...not found Checking for program /global/homes/m/madams/git-fat/sed...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/sed...not found Checking for program /usr/common/usg/bin/sed...not found Checking for program /usr/common/mss/bin/sed...not found Checking for program /usr/common/nsg/bin/sed...not found Checking for program /usr/lib64/qt-3.3/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/sed...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/sed...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/sed...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/sed...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/sed...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/sed...not found Checking for program /usr/syscom/nsg/sbin/sed...not found Checking for program /usr/syscom/nsg/bin/sed...not found Checking for program /usr/share/Modules/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" Executing: /bin/sed -i s/sed/sd/g "/global/scratch2/sd/madams/petsc-T9Q01S/config.programs/sed1" Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mv...not found Checking for program /global/homes/m/madams/git-fat/mv...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mv...not found Checking for program /usr/common/usg/bin/mv...not found Checking for program /usr/common/mss/bin/mv...not found Checking for program /usr/common/nsg/bin/mv...not found Checking for program /usr/lib64/qt-3.3/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/mv...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mv...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/mv...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/mv...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/mv...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/mv...not found Checking for program /usr/syscom/nsg/sbin/mv...not found Checking for program /usr/syscom/nsg/bin/mv...not found Checking for program /usr/share/Modules/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/cp...not found Checking for program /global/homes/m/madams/git-fat/cp...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/cp...not found Checking for program /usr/common/usg/bin/cp...not found Checking for program /usr/common/mss/bin/cp...not found Checking for program /usr/common/nsg/bin/cp...not found Checking for program /usr/lib64/qt-3.3/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/cp...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/cp...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/cp...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/cp...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/cp...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/cp...not found Checking for program /usr/syscom/nsg/sbin/cp...not found Checking for program /usr/syscom/nsg/bin/cp...not found Checking for program /usr/share/Modules/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/grep...not found Checking for program /global/homes/m/madams/git-fat/grep...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/grep...not found Checking for program /usr/common/usg/bin/grep...not found Checking for program /usr/common/mss/bin/grep...not found Checking for program /usr/common/nsg/bin/grep...not found Checking for program /usr/lib64/qt-3.3/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/grep...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/grep...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/grep...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/grep...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/grep...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/grep...not found Checking for program /usr/syscom/nsg/sbin/grep...not found Checking for program /usr/syscom/nsg/bin/grep...not found Checking for program /usr/share/Modules/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/rm...not found Checking for program /global/homes/m/madams/git-fat/rm...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/rm...not found Checking for program /usr/common/usg/bin/rm...not found Checking for program /usr/common/mss/bin/rm...not found Checking for program /usr/common/nsg/bin/rm...not found Checking for program /usr/lib64/qt-3.3/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/rm...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/rm...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/rm...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/rm...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/rm...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/rm...not found Checking for program /usr/syscom/nsg/sbin/rm...not found Checking for program /usr/syscom/nsg/bin/rm...not found Checking for program /usr/share/Modules/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/diff...not found Checking for program /global/homes/m/madams/git-fat/diff...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/diff...not found Checking for program /usr/common/usg/bin/diff...not found Checking for program /usr/common/mss/bin/diff...not found Checking for program /usr/common/nsg/bin/diff...not found Checking for program /usr/lib64/qt-3.3/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/diff...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/diff...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/diff...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/diff...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/diff...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/diff...not found Checking for program /usr/syscom/nsg/sbin/diff...not found Checking for program /usr/syscom/nsg/bin/diff...not found Checking for program /usr/share/Modules/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/global/scratch2/sd/madams/petsc-T9Q01S/config.programs/diff1" "/global/scratch2/sd/madams/petsc-T9Q01S/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /global/homes/m/madams/ps...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/ps...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/gzip...not found Checking for program /global/homes/m/madams/git-fat/gzip...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/gzip...not found Checking for program /usr/common/usg/bin/gzip...not found Checking for program /usr/common/mss/bin/gzip...not found Checking for program /usr/common/nsg/bin/gzip...not found Checking for program /usr/lib64/qt-3.3/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/gzip...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/gzip...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/gzip...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/gzip...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/gzip...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/gzip...not found Checking for program /usr/syscom/nsg/sbin/gzip...not found Checking for program /usr/syscom/nsg/bin/gzip...not found Checking for program /usr/share/Modules/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMake from config.packages.make(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/make.py:60) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:60) Check for user specified make - or gmake, make Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/gmake...not found Checking for program /global/homes/m/madams/git-fat/gmake...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/gmake...not found Checking for program /usr/common/usg/bin/gmake...not found Checking for program /usr/common/mss/bin/gmake...not found Checking for program /usr/common/nsg/bin/gmake...not found Checking for program /usr/lib64/qt-3.3/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/gmake...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/gmake...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/gmake...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/gmake...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/gmake...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/gmake...not found Checking for program /usr/syscom/nsg/sbin/gmake...not found Checking for program /usr/syscom/nsg/bin/gmake...not found Checking for program /usr/share/Modules/bin/gmake...not found Checking for program /usr/local/bin/gmake...not found Checking for program /bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST configureCheckGNUMake from config.packages.make(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/make.py:78) TESTING: configureCheckGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:78) Check for GNU make Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/strings...not found Checking for program /global/homes/m/madams/git-fat/strings...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/strings...not found Checking for program /usr/common/usg/bin/strings...not found Checking for program /usr/common/mss/bin/strings...not found Checking for program /usr/common/nsg/bin/strings...not found Checking for program /usr/lib64/qt-3.3/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/strings...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/strings...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/strings...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/strings...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/strings...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/strings...not found Checking for program /usr/syscom/nsg/sbin/strings...not found Checking for program /usr/syscom/nsg/bin/strings...not found Checking for program /usr/share/Modules/bin/strings...not found Checking for program /usr/local/bin/strings...not found Checking for program /bin/strings...not found Checking for program /usr/bin/strings...found Executing: /usr/bin/strings /usr/bin/gmake stdout: /lib64/ld-linux-x86-64.so.2 mr/I __gmon_start__ libc.so.6 fflush strcpy __rawmemchr __printf_chk fnmatch readdir _IO_putc setlocale strsignal strncmp optind strrchr wait pipe __strdup dcgettext closedir sigprocmask __stack_chk_fail __lxstat unlink realloc abort stdin _exit getpid kill __assert_fail mkstemp strtod strtol feof getloadavg fgets getpwnam calloc strlen sigemptyset memset glob strstr __errno_location chdir dup2 __fprintf_chk sigaddset ctime putenv stdout fputs lseek memcpy fclose malloc strcat remove __strncpy_chk opendir getenv __ctype_b_loc sscanf optarg stderr alarm getlogin readlink setrlimit getopt_long execvp __fxstat __realpath_chk getcwd fwrite fread gettimeofday sigaction waitpid localtime strchr vfork __vfprintf_chk fdopen qsort __strcpy_chk __ctype_tolower_loc setvbuf fcntl __sprintf_chk bsd_signal __xstat getrlimit memmove bindtextdomain opterr strcmp strerror __libc_start_main ferror globfree __environ __cxa_atexit GLIBC_2.4 GLIBC_2.3 GLIBC_2.3.4 GLIBC_2.2.5 5rd" %td" %rd" %jd" %bd" %Zd" %Rd" %Jd" %Bd" %:d" %2d" %*d" %"d" %zc" %rc" %jc" %bc" %Zc" %Rc" %Jc" %Bc" %:c" %2c" %*c" %"c" %zb" %rb" %jb" %bb" %Zb" %Rb" %Jb" %Bb" %:b" %2b" %*b" %"b" %za" %ra" %ja" %ba" %Za" %Ra" %Ja" %Ba" %:a" %2a" =8n" fff. =X[" AVAUATI A<*tUJ" 5v@" l$ H AWAVAUATSH [A\A]A^A_ =TB" []A\A] []A\A] []A\A] ffffff. StZH -{A" -^A" 5d1" =Z?" C(@t+ C(E1 %`5" C(u[H % 5" \$(H l$0L d$8L l$@L t$HL |$PH =|6" =<6" ATSH AVAUATUSH H;-*2" L;t$ []A\A]A^A_ 5|1" |$(H ATUSH 5I0" D$81 5D/" 59." =V-" =B-" D$8dH3 @[]A\ ffff. D$81 T$8dH3 \$@H l$HL d$PH ffff. -U)" H;-}'" 5z2" =5'" l$ L d$(L l$0L t$8L |$@H =v1" 5i&" =X&" l$ L d$(L l$0L t$8L |$@H AWAVAUATI S@H;U@v []A\A]A^A_ fffff. L;%a!" L;%#!" 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Current time *name != '\0' .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # A default, MAKEFILES, or -include/sinclude makefile. # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: `%s' # File is an intermediate prerequisite. # Modification time never checked. # Commands currently running (THIS IS A BUG). # Dependencies commands running (THIS IS A BUG). # Needs to be updated (-q is set). # Invalid value in `update_status' member! %s: Timestamp out of range; substituting %s *** Deleting intermediate file `%s' Removing intermediate files... Commands were specified for file `%s' at %s:%lu, Commands for file `%s' were found by implicit rule search, but `%s' is now considered the same file as `%s'. Commands for `%s' will be ignored in favor of those for `%s'. can't rename single-colon `%s' to double-colon `%s' can't rename double-colon `%s' to single-colon `%s' print_file enter_file lookup_file undefined recursive simple %s: '%s' default environment environment override command line automatic basename addprefix %s:%lu: filter abspath addsuffix notdir filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard wordlist words origin foreach call warning value eval Internal error: func_error: '%s' insufficient number of arguments (%d) to function `%s' unimplemented on this platform: function `%s' non-numeric first argument to `wordlist' function non-numeric second argument to `wordlist' function invalid first argument to `wordlist' function: `%d' non-numeric first argument to `word' function first argument to `word' function must be greater than 0 Cleaning up temporary batch file %s unterminated call to function `%s': missing `%c' Avoiding implicit rule recursion. Trying pattern rule with stem `%.*s'. Rejecting impossible implicit prerequisite `%s'. Rejecting impossible rule prerequisite `%s'. Trying implicit prerequisite `%s'. Trying rule prerequisite `%s'. Found prerequisite `%s' as VPATH `%s' Looking for a rule with intermediate file `%s'. Looking for an implicit rule for `%s'. Looking for archive-member implicit rule for `%s'. job.c ap <= end $(SHELL) $(IFS) %s: Command not found SHELL %s: Shell program not found execvp: write jobserver /bin/sh vfork cannot enforce load limit: getloadavg (remote) [%s] Error %d (ignored) *** [%s] Error %d (core dumped) *** [%s] %s%s remote_status wait .DELETE_ON_ERROR don't Duplicate the job FD read jobs pipe EOF read jobs pipe Read returned EBADF. break case continue exec exit login logout read readonly shift switch test trap umask while %s (line %d) Bad shell context (!unixy && !batch_mode_shell) INTERNAL: Freeing child 0x%08lx (%s) but no tokens left! Released token for child 0x%08lx (%s). cannot enforce load limits on this operating system Estimated system load = %f (actual = %f) (max requested = %f) Putting child 0x%08lx (%s) PID %ld%s on the chain. f->command_state == cs_finished *** Waiting for unfinished jobs.... Live child 0x%08lx (%s) PID %ld %s Reaping losing child 0x%08lx PID %ld %s Reaping winning child 0x%08lx PID %ld %s Cleaning up temp batch file %s Removing child 0x%08lx PID %ld%s from chain. Need a job token; we %shave children INTERNAL: no children as we go to sleep on read Obtained token for child 0x%08lx (%s). construct_command_argv_internal start_waiting_job ?%s: Entering directory `%s' %s: Leaving directory `%s' %sThis program built for %s write MAKECMDGOALS This program built for %s MFLAGS MAKEFLAGS /usr/share/locale getcwd .VARIABLES .FEATURES archives check-symlink MAKE_RESTARTS MAKE_COMMAND $(MAKE_COMMAND) MAKE -*-command-variables-*- ${-*-command-variables-*-} MAKEOVERRIDES MAKELEVEL CURDIR TMPDIR /tmp fopen (temporary file) fwrite (temporary file) .DEFAULT .DEFAULT_GOAL %d,%d dup jobserver creating jobs pipe init jobserver pipe Updating makefiles.... Makefile `%s' was not found chdir Re-executing[%u]: %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%u main.c unlink (temporary file): No targets Updating goal targets.... always-make basic debug environment-overrides help ignore-errors include-dir jobs jobserver-fds load-average check-symlink-times just-print old-file print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version no-print-directory what-if warn-undefined-variables quiet stop new-file assume-new assume-old max-load dry-run recon Options: %s: Entering an unknown directory %s: Leaving an unknown directory %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory `%s' %s[%u]: Leaving directory `%s' %sGNU Make %s %sCopyright (C) 2006 Free Software Foundation, Inc. %sThis is free software; see the source for copying conditions. %sThere is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A %sPARTICULAR PURPOSE. %sThis program built for %s (%s) # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name the `-%c' option requires a non-empty string argument the `-%c' option requires a positive integral argument Usage: %s [options] [target] ... This program built for %s (%s) Report bugs to target-specific order-only second-expansion else-if unknown debug level specification `%s' Makefile from standard input specified twice. internal error: multiple --jobserver-fds options internal error: invalid --jobserver-fds string `%s' warning: -jN forced in submake: disabling jobserver mode. warning: jobserver unavailable: using -j1. Add `+' to parent make rule. More parallel jobs (-jN) than this platform can handle requested. Resetting to single job (-j1) mode. Makefile `%s' might loop; not remaking it. Failed to remake makefile `%s'. Included makefile `%s' was not found. .DEFAULT_GOAL contains more than one target No targets specified and no makefile found warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from commands. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any commands; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -p, --print-data-base Print make's internal database. -q, --question Run no commands; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo commands. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. main misc.c d == h %s:%lu: *** %s: *** %s[%u]: *** . Stop. virtual memory exhausted h->count != 0 %s: %s[%u]: write error: %s write error %s%s: %s hash_strfree hash_savestring hash_strdup $(HOME) HOME /usr/include .INCLUDE_DIRS define endef ifdef ifndef ifeq ifneq else endif extraneous `%s' .POSIX .SECONDEXPANSION invalid syntax in conditional extraneous `endef' empty variable name empty `override' directive invalid `override' directive unexport vpath -include sinclude missing rule before commands missing separator%s read.c *p2 != '\0' v != 0 missing target pattern multiple target patterns missing `endif' Reading makefile `%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) /usr/gnu/include /usr/local/include GNUmakefile Makefile warning: NUL character seen; rest of line ignored Extraneous text after `endef' directive missing `endef', unterminated `define' Extraneous text after `%s' directive only one `else' per conditional prerequisites cannot be defined in command scripts mixed implicit and static pattern rules mixed implicit and normal rules target `%s' doesn't match the target pattern target file `%s' has both : and :: entries target `%s' given more than once in the same rule. warning: overriding commands for target `%s' warning: ignoring old commands for target `%s' commands commence before first target (did you mean TAB instead of 8 spaces?) Malformed target-specific variable definition target pattern contains no `%%' eval record_target_var lstat: readlink: $(strip $(.LIBPATTERNS)) %s/%s touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: Pruning file `%s'. Still updating file `%s'. Finished updating file `%s'. File `%s' does not exist. No need to remake target `%s' ; using VPATH name `%s' Must remake target `%s'. Ignoring VPATH name `%s'. remake.c Nothing to be done for `%s'. `%s' is up to date. /usr/lib /usr/lib64 .LIBPATTERNS element `%s' is not a pattern Warning: File `%s' has modification time %.2g s in the future %sNo rule to make target `%s'%s %sNo rule to make target `%s', needed by `%s'%s Considering target file `%s'. Recently tried and failed to update file `%s'. File `%s' was considered already. *** Warning: .LOW_RESOLUTION_TIME file `%s' has a high resolution time stamp Found an implicit rule for `%s'. No implicit rule found for `%s'. Using default commands for `%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file `%s'. The prerequisites of `%s' are being made. Giving up on target file `%s'. Target `%s' not remade because of errors. Prerequisite `%s' is order-only for target `%s'. Prerequisite `%s' of target `%s' does not exist. Prerequisite `%s' is newer than target `%s'. Prerequisite `%s' is older than target `%s'. Target `%s' is double-colon and has no prerequisites. No commands for `%s' and no prerequisites actually changed. Making `%s' due to always-make flag. Commands of `%s' are being run. Failed to remake target file `%s'. Successfully remade target file `%s'. Target file `%s' needs remade under -q. file->update_status >= 0 && file->update_status <= 2 update_file_1 # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. (%.o) BUG: num_pattern_rules wrong! %u != %u %s # of strings in strcache: %d %s strcache size: total = %d / max = %d / min = %d / avg = %d %s strcache free: total = %d / max = %d / min = %d / avg = %d %s # of strcache buffers: %d strcache.c best->bytesfree > len add_string environment under -e (from `%s', line %lu) define %s endef %s %s= $(subst ,,%s) # Variables %s : variable.c %s%s%s MAKE_VERSION MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) pop_variable_scope # variable set hash-table stats: # Pattern-specific Variable Values # %u pattern-specific variable values # No pattern-specific variable values. current_variable_set_list->next != ((void *)0) 3.81 x86_64-redhat-linux-gnu # VPATH Search Paths vpath %s %s%c # No `vpath' search paths. # %u `vpath' search paths. $(strip $(VPATH)) $(strip $(GPATH)) # No general (`VPATH' variable) search path. # General (`VPATH' variable) search path: Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% can't allocate %ld bytes for hash table: memory exhausted .out .a .ln .o .c .cc .C .cpp .p .f .F .r .y .l .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el /bin/sh -c #;"*?[]&|<>(){}$`^~! Defined make macro "MAKE_IS_GNUMAKE" to "1" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} ================================================================================ TEST configureMakeNP from config.packages.make(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/make.py:122) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:122) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 32 cores: using make_np = 24 Defined make macro "MAKE_NP" to "24" Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:747) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:747) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Package specific search directory MPI: [] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Checking for headers Package specific search directory MPI: ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 82 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 2 # 88 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Datatype; # 118 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 137 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 146 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 161 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 174 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 184 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Comm; typedef int MPI_Group; typedef int MPI_Win; typedef struct ADIOI_FileD *MPI_File; typedef int MPI_Op; # 238 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 259 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 273 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern int MPICH_ATTR_FAILED_PROCESSES; typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; typedef int MPI_Errhandler; # 353 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Request; typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPI_COMBINER_STRUCT_INTEGER = 11, MPI_COMBINER_STRUCT = 12, MPI_COMBINER_SUBARRAY = 13, MPI_COMBINER_DARRAY = 14, MPI_COMBINER_F90_REAL = 15, MPI_COMBINER_F90_COMPLEX = 16, MPI_COMBINER_F90_INTEGER = 17, MPI_COMBINER_RESIZED = 18 }; typedef int MPI_Info; # 440 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef long MPI_Aint; typedef int MPI_Fint; typedef long long MPI_Offset; typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; # 495 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 513 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern MPI_Fint * MPI_F_STATUS_IGNORE; extern MPI_Fint * MPI_F_STATUSES_IGNORE; typedef int (MPI_Grequest_cancel_function)(void *, int); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); # 554 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 591 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 608 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 617 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype datatype, MPI_Aint *, void *); int MPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Get_count(MPI_Status *, MPI_Datatype, int *); int MPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Buffer_attach( void*, int); int MPI_Buffer_detach( void*, int *); int MPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Wait(MPI_Request *, MPI_Status *); int MPI_Test(MPI_Request *, int *, MPI_Status *); int MPI_Request_free(MPI_Request *); int MPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int MPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Waitall(int, MPI_Request *, MPI_Status *); int MPI_Testall(int, MPI_Request *, int *, MPI_Status *); int MPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int MPI_Probe(int, int, MPI_Comm, MPI_Status *); int MPI_Cancel(MPI_Request *); int MPI_Test_cancelled(MPI_Status *, int *); int MPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Bsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Ssend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Rsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Recv_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Start(MPI_Request *); int MPI_Startall(int, MPI_Request *); int MPI_Sendrecv(void *, int, MPI_Datatype,int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int MPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int MPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int MPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int MPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int MPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int MPI_Address(void*, MPI_Aint *); int MPI_Type_extent(MPI_Datatype, MPI_Aint *); int MPI_Type_size(MPI_Datatype, int *); int MPI_Type_lb(MPI_Datatype, MPI_Aint *); int MPI_Type_ub(MPI_Datatype, MPI_Aint *); int MPI_Type_commit(MPI_Datatype *); int MPI_Type_free(MPI_Datatype *); int MPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int MPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int MPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int MPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int MPI_Barrier(MPI_Comm ); int MPI_Bcast(void*, int, MPI_Datatype, int, MPI_Comm ); int MPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int MPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Scatterv(void* , int *, int *, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int MPI_Op_create(MPI_User_function *, int, MPI_Op *); int MPI_Op_free( MPI_Op *); int MPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int MPI_Group_size(MPI_Group, int *); int MPI_Group_rank(MPI_Group, int *); int MPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int MPI_Group_compare(MPI_Group, MPI_Group, int *); int MPI_Comm_group(MPI_Comm, MPI_Group *); int MPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_free(MPI_Group *); int MPI_Comm_size(MPI_Comm, int *); int MPI_Comm_rank(MPI_Comm, int *); int MPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int MPI_Comm_dup(MPI_Comm, MPI_Comm *); int MPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int MPI_Comm_free(MPI_Comm *); int MPI_Comm_test_inter(MPI_Comm, int *); int MPI_Comm_remote_size(MPI_Comm, int *); int MPI_Comm_remote_group(MPI_Comm, MPI_Group *); int MPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm * ); int MPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int MPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int MPI_Keyval_free(int *); int MPI_Attr_put(MPI_Comm, int, void*); int MPI_Attr_get(MPI_Comm, int, void *, int *); int MPI_Attr_delete(MPI_Comm, int); int MPI_Topo_test(MPI_Comm, int *); int MPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Dims_create(int, int, int *); int MPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Graphdims_get(MPI_Comm, int *, int *); int MPI_Graph_get(MPI_Comm, int, int, int *, int *); int MPI_Cartdim_get(MPI_Comm, int *); int MPI_Cart_get(MPI_Comm, int, int *, int *, int *); int MPI_Cart_rank(MPI_Comm, int *, int *); int MPI_Cart_coords(MPI_Comm, int, int, int *); int MPI_Graph_neighbors_count(MPI_Comm, int, int *); int MPI_Graph_neighbors(MPI_Comm, int, int, int *); int MPI_Cart_shift(MPI_Comm, int, int, int *, int *); int MPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int MPI_Cart_map(MPI_Comm, int, int *, int *, int *); int MPI_Graph_map(MPI_Comm, int, int *, int *, int *); int MPI_Get_processor_name(char *, int *); int MPI_Get_version(int *, int *); int MPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int MPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int MPI_Errhandler_free(MPI_Errhandler *); int MPI_Error_string(int, char *, int *); int MPI_Error_class(int, int *); double MPI_Wtime(void); double MPI_Wtick(void); double PMPI_Wtime(void); double PMPI_Wtick(void); int MPI_Init(int *, char ***); int MPI_Finalize(void); int MPI_Initialized(int *); int MPI_Abort(MPI_Comm, int); int MPI_Pcontrol(const int, ...); int MPIR_Dup_fn ( MPI_Comm, int, void *, void *, void *, int * ); int MPI_Close_port(char *); int MPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_disconnect(MPI_Comm *); int MPI_Comm_get_parent(MPI_Comm *); int MPI_Comm_join(int, MPI_Comm *); int MPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int MPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int MPI_Lookup_name(char *, MPI_Info, char *); int MPI_Open_port(MPI_Info, char *); int MPI_Publish_name(char *, MPI_Info, char *); int MPI_Unpublish_name(char *, MPI_Info, char *); int MPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int MPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Win_complete(MPI_Win); int MPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int MPI_Win_fence(int, MPI_Win); int MPI_Win_free(MPI_Win *); int MPI_Win_get_group(MPI_Win, MPI_Group *); int MPI_Win_lock(int, int, int, MPI_Win); int MPI_Win_post(MPI_Group, int, MPI_Win); int MPI_Win_start(MPI_Group, int, MPI_Win); int MPI_Win_test(MPI_Win, int *); int MPI_Win_unlock(int, MPI_Win); int MPI_Win_wait(MPI_Win); int MPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int MPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Add_error_class(int *); int MPI_Add_error_code(int, int *); int MPI_Add_error_string(int, char *); int MPI_Comm_call_errhandler(MPI_Comm, int); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int MPI_Comm_delete_attr(MPI_Comm, int); int MPI_Comm_free_keyval(int *); int MPI_Comm_get_attr(MPI_Comm, int, void *, int *); int MPI_Comm_get_name(MPI_Comm, char *, int *); int MPI_Comm_set_attr(MPI_Comm, int, void *); int MPI_Comm_set_name(MPI_Comm, char *); int MPI_File_call_errhandler(MPI_File, int); int MPI_Grequest_complete(MPI_Request); int MPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int MPI_Init_thread(int *, char ***, int, int *); int MPI_Is_thread_main(int *); int MPI_Query_thread(int *); int MPI_Status_set_cancelled(MPI_Status *, int); int MPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int MPI_Type_delete_attr(MPI_Datatype, int); int MPI_Type_dup(MPI_Datatype, MPI_Datatype *); int MPI_Type_free_keyval(int *); int MPI_Type_get_attr(MPI_Datatype, int, void *, int *); int MPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int MPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int MPI_Type_get_name(MPI_Datatype, char *, int *); int MPI_Type_set_attr(MPI_Datatype, int, void *); int MPI_Type_set_name(MPI_Datatype, char *); int MPI_Type_match_size( int, int, MPI_Datatype *); int MPI_Win_call_errhandler(MPI_Win, int); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int MPI_Win_delete_attr(MPI_Win, int); int MPI_Win_free_keyval(int *); int MPI_Win_get_attr(MPI_Win, int, void *, int *); int MPI_Win_get_name(MPI_Win, char *, int *); int MPI_Win_set_attr(MPI_Win, int, void *); int MPI_Win_set_name(MPI_Win, char *); # 901 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" int MPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int MPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int MPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int MPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int MPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int MPI_File_set_errhandler(MPI_File, MPI_Errhandler); int MPI_Finalized(int *); int MPI_Free_mem(void *); int MPI_Get_address(void *, MPI_Aint *); int MPI_Info_create(MPI_Info *); int MPI_Info_delete(MPI_Info, char *); int MPI_Info_dup(MPI_Info, MPI_Info *); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info, char *, int, char *, int *); int MPI_Info_get_nkeys(MPI_Info, int *); int MPI_Info_get_nthkey(MPI_Info, int, char *); int MPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int MPI_Info_set(MPI_Info, char *, char *); int MPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int MPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int MPI_Request_get_status(MPI_Request, int *, MPI_Status *); int MPI_Status_c2f(MPI_Status *, MPI_Fint *); int MPI_Status_f2c(MPI_Fint *, MPI_Status *); int MPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int MPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int MPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int MPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int MPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int MPI_Type_create_f90_integer( int, MPI_Datatype * ); int MPI_Type_create_f90_real( int, int, MPI_Datatype * ); int MPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); int PMPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Get_count(MPI_Status *, MPI_Datatype, int *); int PMPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Buffer_attach( void* buffer, int); int PMPI_Buffer_detach( void* buffer, int *); int PMPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Wait(MPI_Request *, MPI_Status *); int PMPI_Test(MPI_Request *, int *, MPI_Status *); int PMPI_Request_free(MPI_Request *); int PMPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int PMPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Waitall(int, MPI_Request *, MPI_Status *); int PMPI_Testall(int, MPI_Request *, int *, MPI_Status *); int PMPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int PMPI_Probe(int, int, MPI_Comm, MPI_Status *); int PMPI_Cancel(MPI_Request *); int PMPI_Test_cancelled(MPI_Status *, int *); int PMPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Bsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ssend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Rsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Recv_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Start(MPI_Request *); int PMPI_Startall(int, MPI_Request *); int PMPI_Sendrecv(void *, int, MPI_Datatype, int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int PMPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int PMPI_Address(void*, MPI_Aint *); int PMPI_Type_extent(MPI_Datatype, MPI_Aint *); int PMPI_Type_size(MPI_Datatype, int *); int PMPI_Type_lb(MPI_Datatype, MPI_Aint *); int PMPI_Type_ub(MPI_Datatype, MPI_Aint *); int PMPI_Type_commit(MPI_Datatype *); int PMPI_Type_free(MPI_Datatype *); int PMPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int PMPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int PMPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int PMPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int PMPI_Barrier(MPI_Comm ); int PMPI_Bcast(void* buffer, int, MPI_Datatype, int, MPI_Comm ); int PMPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int PMPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Scatterv(void* , int *, int *displs, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int PMPI_Op_create(MPI_User_function *, int, MPI_Op *); int PMPI_Op_free( MPI_Op *); int PMPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int PMPI_Group_size(MPI_Group, int *); int PMPI_Group_rank(MPI_Group, int *); int PMPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int PMPI_Group_compare(MPI_Group, MPI_Group, int *); int PMPI_Comm_group(MPI_Comm, MPI_Group *); int PMPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_free(MPI_Group *); int PMPI_Comm_size(MPI_Comm, int *); int PMPI_Comm_rank(MPI_Comm, int *); int PMPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int PMPI_Comm_dup(MPI_Comm, MPI_Comm *); int PMPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int PMPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int PMPI_Comm_free(MPI_Comm *); int PMPI_Comm_test_inter(MPI_Comm, int *); int PMPI_Comm_remote_size(MPI_Comm, int *); int PMPI_Comm_remote_group(MPI_Comm, MPI_Group *); int PMPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm *); int PMPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int PMPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int PMPI_Keyval_free(int *); int PMPI_Attr_put(MPI_Comm, int, void*); int PMPI_Attr_get(MPI_Comm, int, void *, int *); int PMPI_Attr_delete(MPI_Comm, int); int PMPI_Topo_test(MPI_Comm, int *); int PMPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Dims_create(int, int, int *); int PMPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Graphdims_get(MPI_Comm, int *, int *); int PMPI_Graph_get(MPI_Comm, int, int, int *, int *); int PMPI_Cartdim_get(MPI_Comm, int *); int PMPI_Cart_get(MPI_Comm, int, int *, int *, int *); int PMPI_Cart_rank(MPI_Comm, int *, int *); int PMPI_Cart_coords(MPI_Comm, int, int, int *); int PMPI_Graph_neighbors_count(MPI_Comm, int, int *); int PMPI_Graph_neighbors(MPI_Comm, int, int, int *); int PMPI_Cart_shift(MPI_Comm, int, int, int *, int *); int PMPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int PMPI_Cart_map(MPI_Comm, int, int *, int *, int *); int PMPI_Graph_map(MPI_Comm, int, int *, int *, int *); int PMPI_Get_processor_name(char *, int *); int PMPI_Get_version(int *, int *); int PMPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int PMPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int PMPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int PMPI_Errhandler_free(MPI_Errhandler *); int PMPI_Error_string(int, char *, int *); int PMPI_Error_class(int, int *); int PMPI_Init(int *, char ***); int PMPI_Finalize(void); int PMPI_Initialized(int *); int PMPI_Abort(MPI_Comm, int); int PMPI_Pcontrol(const int, ...); int PMPI_Close_port(char *); int PMPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_disconnect(MPI_Comm *); int PMPI_Comm_get_parent(MPI_Comm *); int PMPI_Comm_join(int, MPI_Comm *); int PMPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int PMPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int PMPI_Lookup_name(char *, MPI_Info, char *); int PMPI_Open_port(MPI_Info, char *); int PMPI_Publish_name(char *, MPI_Info, char *); int PMPI_Unpublish_name(char *, MPI_Info, char *); int PMPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int PMPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Win_complete(MPI_Win); int PMPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int PMPI_Win_fence(int, MPI_Win); int PMPI_Win_free(MPI_Win *); int PMPI_Win_get_group(MPI_Win, MPI_Group *); int PMPI_Win_lock(int, int, int, MPI_Win); int PMPI_Win_post(MPI_Group, int, MPI_Win); int PMPI_Win_start(MPI_Group, int, MPI_Win); int PMPI_Win_test(MPI_Win, int *); int PMPI_Win_unlock(int, MPI_Win); int PMPI_Win_wait(MPI_Win); int PMPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int PMPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Add_error_class(int *); int PMPI_Add_error_code(int, int *); int PMPI_Add_error_string(int, char *); int PMPI_Comm_call_errhandler(MPI_Comm, int); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int PMPI_Comm_delete_attr(MPI_Comm, int); int PMPI_Comm_free_keyval(int *); int PMPI_Comm_get_attr(MPI_Comm, int, void *, int *); int PMPI_Comm_get_name(MPI_Comm, char *, int *); int PMPI_Comm_set_attr(MPI_Comm, int, void *); int PMPI_Comm_set_name(MPI_Comm, char *); int PMPI_File_call_errhandler(MPI_File, int); int PMPI_Grequest_complete(MPI_Request); int PMPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int PMPI_Init_thread(int *, char ***, int, int *); int PMPI_Is_thread_main(int *); int PMPI_Query_thread(int *); int PMPI_Status_set_cancelled(MPI_Status *, int); int PMPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int PMPI_Type_delete_attr(MPI_Datatype, int); int PMPI_Type_dup(MPI_Datatype, MPI_Datatype *); int PMPI_Type_free_keyval(int *); int PMPI_Type_get_attr(MPI_Datatype, int, void *, int *); int PMPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int PMPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int PMPI_Type_get_name(MPI_Datatype, char *, int *); int PMPI_Type_set_attr(MPI_Datatype, int, void *); int PMPI_Type_set_name(MPI_Datatype, char *); int PMPI_Type_match_size( int, int, MPI_Datatype *); int PMPI_Win_call_errhandler(MPI_Win, int); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int PMPI_Win_delete_attr(MPI_Win, int); int PMPI_Win_free_keyval(int *); int PMPI_Win_get_attr(MPI_Win, int, void *, int *); int PMPI_Win_get_name(MPI_Win, char *, int *); int PMPI_Win_set_attr(MPI_Win, int, void *); int PMPI_Win_set_name(MPI_Win, char *); int PMPI_Type_create_f90_integer( int, MPI_Datatype * ); int PMPI_Type_create_f90_real( int, int, MPI_Datatype * ); int PMPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int PMPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int PMPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int PMPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int PMPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int PMPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int PMPI_File_set_errhandler(MPI_File, MPI_Errhandler); int PMPI_Finalized(int *); int PMPI_Free_mem(void *); int PMPI_Get_address(void *, MPI_Aint *); int PMPI_Info_create(MPI_Info *); int PMPI_Info_delete(MPI_Info, char *); int PMPI_Info_dup(MPI_Info, MPI_Info *); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info, char *, int, char *, int *); int PMPI_Info_get_nkeys(MPI_Info, int *); int PMPI_Info_get_nthkey(MPI_Info, int, char *); int PMPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int PMPI_Info_set(MPI_Info, char *, char *); int PMPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int PMPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int PMPI_Request_get_status(MPI_Request, int *, MPI_Status *); int PMPI_Status_c2f(MPI_Status *, MPI_Fint *); int PMPI_Status_f2c(MPI_Fint *, MPI_Status *); int PMPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int PMPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int PMPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int PMPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int PMPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); # 1262 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 1 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 83 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 2 # 102 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 109 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 122 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 139 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 149 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 159 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 177 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" int MPI_File_open(MPI_Comm, char *, int, MPI_Info, MPI_File *); int MPI_File_close(MPI_File *); int MPI_File_delete(char *, MPI_Info); int MPI_File_set_size(MPI_File, MPI_Offset); int MPI_File_preallocate(MPI_File, MPI_Offset); int MPI_File_get_size(MPI_File, MPI_Offset *); int MPI_File_get_group(MPI_File, MPI_Group *); int MPI_File_get_amode(MPI_File, int *); int MPI_File_set_info(MPI_File, MPI_Info); int MPI_File_get_info(MPI_File, MPI_Info *); int MPI_File_set_view(MPI_File, MPI_Offset, MPI_Datatype, MPI_Datatype, char *, MPI_Info); int MPI_File_get_view(MPI_File, MPI_Offset *, MPI_Datatype *, MPI_Datatype *, char *); int MPI_File_read_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_seek(MPI_File, MPI_Offset, int); int MPI_File_get_position(MPI_File, MPI_Offset *); int MPI_File_get_byte_offset(MPI_File, MPI_Offset, MPI_Offset *); int MPI_File_read_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_seek_shared(MPI_File, MPI_Offset, int); int MPI_File_get_position_shared(MPI_File, MPI_Offset *); int MPI_File_read_at_all_begin(MPI_File, MPI_Offset, void *, int, MPI_Datatype); int MPI_File_read_at_all_end(MPI_File, void *, MPI_Status *); int MPI_File_write_at_all_begin(MPI_File, MPI_Offset, void *, int, MPI_Datatype); int MPI_File_write_at_all_end(MPI_File, void *, MPI_Status *); int MPI_File_read_all_begin(MPI_File, void *, int, MPI_Datatype); int MPI_File_read_all_end(MPI_File, void *, MPI_Status *); int MPI_File_write_all_begin(MPI_File, void *, int, MPI_Datatype); int MPI_File_write_all_end(MPI_File, void *, MPI_Status *); Found header files ['mpi.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:214) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:214) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPI_COMM_F2C" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPI_COMM_C2F" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:182) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:182) Check for functions added to the interface in MPI-2 Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPI_FINALIZED" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPI_IN_PLACE" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) ================================================================================ TEST configureTypes from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:234) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:234) Checking for MPI types Checking for size of type: MPI_Comm Defined "SIZEOF_MPI_COMM" to "4" Checking for size of type: MPI_Fint Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:246) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:246) Checking for MPI Datatype handles Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Defined "HAVE_MPI_LONG_DOUBLE" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Defined "HAVE_MPI_INT64_T" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Defined "HAVE_MPI_C_DOUBLE_COMPLEX" to "1" ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:320) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:320) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:633) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:633) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPI_SGI_barrier' Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:643) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:643) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:661) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:661) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.F Successful compile: Source: program main include 'mpif.h' end Checking for fortran mpi_init() Checking for functions [] in library [] [] Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.F Successful compile: Source: program main include 'mpif.h' integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC Checking for mpi.mod Checking for functions [] in library [] [] Pushing language FC Executing: mpiifort -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.F Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC Executing: mpiifort -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:686) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:686) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:723) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:723) Find MPI include paths from "mpicc -show" Executing: mpiicc -show stdout: icc -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpigf -lmpi -lmpigi -ldl -lrt -lpthread compilers: Checking arg icc compilers: Checking arg -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include compilers: Found include directory: /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include compilers: Checking arg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/lib compilers: Checking arg -Xlinker compilers: Checking arg --enable-new-dtags compilers: Checking arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg -Xlinker compilers: Checking arg /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/lib compilers: Checking arg -Xlinker compilers: Checking arg -rpath compilers: Checking arg -Xlinker compilers: Checking arg /opt/intel/mpi-rt/4.1 compilers: Checking arg -lmpigf compilers: Checking arg -lmpi compilers: Checking arg -lmpigi compilers: Checking arg -ldl compilers: Checking arg -lrt compilers: Checking arg -lpthread Checking for functions [MPI_Alltoallw] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); static void _check_MPI_Alltoallw() { MPI_Alltoallw(); } int main() { _check_MPI_Alltoallw();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [MPI_Type_create_indexed_block] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); static void _check_MPI_Type_create_indexed_block() { MPI_Type_create_indexed_block(); } int main() { _check_MPI_Type_create_indexed_block();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for functions [MPI_Win_create] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); static void _check_MPI_Win_create() { MPI_Win_create(); } int main() { _check_MPI_Win_create();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x37): undefined reference to `MPI_Iallreduce' /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x3e): undefined reference to `MPI_Ibarrier' Popping language C Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x1b): undefined reference to `MPI_Iallreduce' /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x22): undefined reference to `MPI_Ibarrier' Popping language C Checking for functions [MPI_Init_thread MPI_Iallreduce] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } int main() { _check_MPI_Init_thread(); _check_MPI_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x1b): undefined reference to `MPI_Iallreduce' Popping language C Checking for functions [MPI_Init_thread] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } int main() { _check_MPI_Init_thread();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [MPI_Iallreduce] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } int main() { _check_MPI_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPI_Iallreduce' Popping language C Checking for functions [MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPI_Ibarrier' Popping language C Checking for functions [MPI_Ibarrier] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } int main() { _check_MPI_Ibarrier();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPI_Ibarrier' Popping language C Checking for functions [MPI_Finalized] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } int main() { _check_MPI_Finalized();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [MPI_Exscan] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPIX_Iallreduce' Popping language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Checking for functions [MPIDI_CH3I_sock_set] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); static void _check_MPIDI_CH3I_sock_set() { MPIDI_CH3I_sock_set(); } int main() { _check_MPIDI_CH3I_sock_set();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPIDI_CH3I_sock_set' Popping language C Checking for functions [MPIDI_CH3I_sock_fixed_nbc_progress] in library [] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); static void _check_MPIDI_CH3I_sock_fixed_nbc_progress() { MPIDI_CH3I_sock_fixed_nbc_progress(); } int main() { _check_MPIDI_CH3I_sock_fixed_nbc_progress();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `MPIDI_CH3I_sock_fixed_nbc_progress' Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:132) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:132) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/MPI.py:145) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:145) Checking for mpiexec Defined make macro "MPIEXEC" to "Not_appropriate_for_batch_systems_You_must_use_your_batch_system_to_submit_MPI_jobs_speak_with_your_local_sys_admin" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/libconftest.a /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o ; /usr/bin/ranlib /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/libconftest.a Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/libconftest.a /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/conftest.o ; /usr/bin/ranlib /global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI/libconftest.a Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Library was shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.thrust(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.utilities.scalarTypes(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/scalarTypes.py:38) TESTING: configureScalarType from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:38) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_ISNORMAL" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_ISNAN" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_ISINF" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c:(.text+0x25): undefined reference to `_isnan' Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes/conftest.c:(.text+0x25): undefined reference to `_finite' Popping language C ================================================================================ TEST configurePrecision from PETSc.utilities.scalarTypes(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/scalarTypes.py:78) TESTING: configurePrecision from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:78) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Precision is double ================================================================================ TEST configureLibraryOptions from PETSc.utilities.libraryOptions(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/libraryOptions.py:48) TESTING: configureLibraryOptions from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:48) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Executing: mpiicc -qversion Defined "USE_MALLOC_COALESCED" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `bgl_perfctr_void' Popping language C Checking for functions [ADIOI_BGL_Open] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `ADIOI_BGL_Open' Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.utilities.libraryOptions(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/libraryOptions.py:97) TESTING: configureISColorValueType from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:97) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_SIZE" to "PETSC_SIZEOF_SHORT" ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.yaml(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.yaml(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.tetgen(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.tetgen(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.ssl(/chos/global/u2/m/madams/petsc/config/PETSc/packages/ssl.py:30) TESTING: configureLibrary from PETSc.packages.ssl(config/PETSc/packages/ssl.py:30) ================================================================================== Checking for a functional ssl Checking for library in Package specific search directory SSL: ['libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lssl -lcrypto -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lssl x86_64-k1om-linux-ld: cannot find -lcrypto Popping language C Checking for library in Package specific search directory SSL: ['lib64/libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['lib64/libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lssl -lcrypto -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lssl x86_64-k1om-linux-ld: cannot find -lcrypto Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.ssl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.ssl(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C PETSc clone, checking for Sowing or if it is needed Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/bfort...not found Checking for program /global/homes/m/madams/git-fat/bfort...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/bfort...not found Checking for program /usr/common/usg/bin/bfort...not found Checking for program /usr/common/mss/bin/bfort...not found Checking for program /usr/common/nsg/bin/bfort...not found Checking for program /usr/lib64/qt-3.3/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/bfort...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/bfort...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/bfort...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/bfort...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/bfort...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/bfort...not found Checking for program /usr/syscom/nsg/sbin/bfort...not found Checking for program /usr/syscom/nsg/bin/bfort...not found Checking for program /usr/share/Modules/bin/bfort...not found Checking for program /usr/local/bin/bfort...not found Checking for program /bin/bfort...not found Checking for program /usr/bin/bfort...not found Checking for program /usr/local/sbin/bfort...not found Checking for program /usr/sbin/bfort...not found Checking for program /sbin/bfort...not found Checking for program /global/homes/m/madams/bfort...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/bfort...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/doctext...not found Checking for program /global/homes/m/madams/git-fat/doctext...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/doctext...not found Checking for program /usr/common/usg/bin/doctext...not found Checking for program /usr/common/mss/bin/doctext...not found Checking for program /usr/common/nsg/bin/doctext...not found Checking for program /usr/lib64/qt-3.3/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/doctext...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/doctext...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/doctext...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/doctext...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/doctext...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/doctext...not found Checking for program /usr/syscom/nsg/sbin/doctext...not found Checking for program /usr/syscom/nsg/bin/doctext...not found Checking for program /usr/share/Modules/bin/doctext...not found Checking for program /usr/local/bin/doctext...not found Checking for program /bin/doctext...not found Checking for program /usr/bin/doctext...not found Checking for program /usr/local/sbin/doctext...not found Checking for program /usr/sbin/doctext...not found Checking for program /sbin/doctext...not found Checking for program /global/homes/m/madams/doctext...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/doctext...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/mapnames...not found Checking for program /global/homes/m/madams/git-fat/mapnames...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/mapnames...not found Checking for program /usr/common/usg/bin/mapnames...not found Checking for program /usr/common/mss/bin/mapnames...not found Checking for program /usr/common/nsg/bin/mapnames...not found Checking for program /usr/lib64/qt-3.3/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/mapnames...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/mapnames...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/mapnames...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/mapnames...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/mapnames...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/mapnames...not found Checking for program /usr/syscom/nsg/sbin/mapnames...not found Checking for program /usr/syscom/nsg/bin/mapnames...not found Checking for program /usr/share/Modules/bin/mapnames...not found Checking for program /usr/local/bin/mapnames...not found Checking for program /bin/mapnames...not found Checking for program /usr/bin/mapnames...not found Checking for program /usr/local/sbin/mapnames...not found Checking for program /usr/sbin/mapnames...not found Checking for program /sbin/mapnames...not found Checking for program /global/homes/m/madams/mapnames...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/mapnames...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/bib2html...not found Checking for program /global/homes/m/madams/git-fat/bib2html...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/bib2html...not found Checking for program /usr/common/usg/bin/bib2html...not found Checking for program /usr/common/mss/bin/bib2html...not found Checking for program /usr/common/nsg/bin/bib2html...not found Checking for program /usr/lib64/qt-3.3/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/bib2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/bib2html...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/bib2html...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/bib2html...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/bib2html...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/bib2html...not found Checking for program /usr/syscom/nsg/sbin/bib2html...not found Checking for program /usr/syscom/nsg/bin/bib2html...not found Checking for program /usr/share/Modules/bin/bib2html...not found Checking for program /usr/local/bin/bib2html...not found Checking for program /bin/bib2html...not found Checking for program /usr/bin/bib2html...not found Checking for program /usr/local/sbin/bib2html...not found Checking for program /usr/sbin/bib2html...not found Checking for program /sbin/bib2html...not found Checking for program /global/homes/m/madams/bib2html...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/bib2html...not found Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/pdflatex...not found Checking for program /global/homes/m/madams/git-fat/pdflatex...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/pdflatex...not found Checking for program /usr/common/usg/bin/pdflatex...not found Checking for program /usr/common/mss/bin/pdflatex...not found Checking for program /usr/common/nsg/bin/pdflatex...not found Checking for program /usr/lib64/qt-3.3/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/pdflatex...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/pdflatex...not found Checking for program /usr/syscom/nsg/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/bin/pdflatex...not found Checking for program /usr/share/Modules/bin/pdflatex...not found Checking for program /usr/local/bin/pdflatex...not found Checking for program /bin/pdflatex...not found Checking for program /usr/bin/pdflatex...not found Checking for program /usr/local/sbin/pdflatex...not found Checking for program /usr/sbin/pdflatex...not found Checking for program /sbin/pdflatex...not found Checking for program /global/homes/m/madams/pdflatex...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/pdflatex...not found Bfort not found. Installing sowing for FortranStubs Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.sowing(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.sowing(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional sowing Looking for SOWING in directory starting with sowing Found a copy of SOWING in sowing-1.1.16g Do not need to rebuild sowing Executing: cp -f /chos/global/u2/m/madams/petsc/arch-knc-opt/externalpackages/sowing-1.1.16g/sowing /chos/global/u2/m/madams/petsc/arch-knc-opt/conf/sowing Executing: cp -f /chos/global/u2/m/madams/petsc/arch-knc-opt/externalpackages/sowing-1.1.16g/sowing /chos/global/u2/m/madams/petsc/arch-knc-opt/conf/sowing Executing: cp -f /chos/global/u2/m/madams/petsc/arch-knc-opt/externalpackages/sowing-1.1.16g/sowing /chos/global/u2/m/madams/petsc/arch-knc-opt/conf/sowing Defined make macro "BFORT " to "/chos/global/u2/m/madams/petsc/arch-knc-opt/bin/bfort" Defined make macro "DOCTEXT " to "/chos/global/u2/m/madams/petsc/arch-knc-opt/bin/doctext" Defined make macro "MAPNAMES " to "/chos/global/u2/m/madams/petsc/arch-knc-opt/bin/mapnames" Defined make macro "BIB2HTML " to "/chos/global/u2/m/madams/petsc/arch-knc-opt/bin/bib2html" Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/pdflatex...not found Checking for program /global/homes/m/madams/git-fat/pdflatex...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/pdflatex...not found Checking for program /usr/common/usg/bin/pdflatex...not found Checking for program /usr/common/mss/bin/pdflatex...not found Checking for program /usr/common/nsg/bin/pdflatex...not found Checking for program /usr/lib64/qt-3.3/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/pdflatex...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/pdflatex...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/pdflatex...not found Checking for program /usr/syscom/nsg/sbin/pdflatex...not found Checking for program /usr/syscom/nsg/bin/pdflatex...not found Checking for program /usr/share/Modules/bin/pdflatex...not found Checking for program /usr/local/bin/pdflatex...not found Checking for program /bin/pdflatex...not found Checking for program /usr/bin/pdflatex...not found Checking for program /usr/local/sbin/pdflatex...not found Checking for program /usr/sbin/pdflatex...not found Checking for program /sbin/pdflatex...not found Checking for program /global/homes/m/madams/pdflatex...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/pdflatex...not found Not checking for library in Download SOWING: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Download SOWING: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] ================================================================================ TEST checkSharedLibrary from PETSc.packages.sowing(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.sowing(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C Running /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/bfort to generate fortran stubs ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pcbddc(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.pcbddc(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.papi(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.papi(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.opengles(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.opengles(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Disabled Lgrind ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.java(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.java(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hwloc(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.hwloc(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.opengl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.opengl(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.glut(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.glut(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.fftw(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.fftw(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PARTY(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.PARTY(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Matlab(/chos/global/u2/m/madams/petsc/config/PETSc/packages/Matlab.py:36) TESTING: alternateConfigureLibrary from PETSc.packages.Matlab(config/PETSc/packages/Matlab.py:36) ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MatlabEngine(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.MatlabEngine(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Chaco(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Chaco(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.valgrind(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.valgrind(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "valgrind/valgrind.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "valgrind/valgrind.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/usr/local/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "valgrind/valgrind.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/usr/local/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: exit code 512 stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c(3): error #2379: cannot open source file "valgrind/valgrind.h" #include ^ Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") Executing: uname -s stdout: Linux Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.threadcomm(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.threadcomm(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sprng(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.sprng(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.saws(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.saws(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pami(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.pami(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.opencl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.opencl(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.viennacl(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.viennacl(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpe(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.mpe(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.expat(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.expat(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.cuda(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.cuda(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.pthread(/chos/global/u2/m/madams/petsc/config/PETSc/packages/pthread.py:26) TESTING: configureLibrary from PETSc.packages.pthread(config/PETSc/packages/pthread.py:26) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Package specific search directory PTHREAD: ['libpthread.a'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library ['libpthread.a'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lpthread -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBPTHREAD" to "1" Popping language C Checking for headers Package specific search directory PTHREAD: ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/usr/include/pthread.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 24 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/endian.h" 1 3 # 1 "/usr/include/bits/endian.h" 1 3 # 38 "/usr/include/endian.h" 2 3 # 51 "/usr/include/endian.h" 3 # 1 "/usr/include/bits/byteswap.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/byteswap.h" 2 3 # 53 "/usr/include/bits/byteswap.h" 3 # 67 "/usr/include/bits/byteswap.h" 3 # 97 "/usr/include/bits/byteswap.h" 3 # 110 "/usr/include/bits/byteswap.h" 3 # 136 "/usr/include/bits/byteswap.h" 3 # 62 "/usr/include/endian.h" 2 3 # 95 "/usr/include/endian.h" 3 # 25 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/sched.h" 1 3 # 1 "/usr/include/bits/types.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/bits/types.h" 2 3 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 68 "/usr/include/bits/types.h" 3 # 126 "/usr/include/bits/types.h" 3 # 1 "/usr/include/bits/typesizes.h" 1 3 # 61 "/usr/include/bits/typesizes.h" 3 # 132 "/usr/include/bits/types.h" 2 3 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/sched.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 31 "/usr/include/sched.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 33 "/usr/include/time.h" 3 # 52 "/usr/include/time.h" 3 # 68 "/usr/include/time.h" 3 typedef __time_t time_t; # 96 "/usr/include/time.h" 3 # 108 "/usr/include/time.h" 3 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 420 "/usr/include/time.h" 3 # 35 "/usr/include/sched.h" 2 3 typedef __pid_t pid_t; # 1 "/usr/include/bits/sched.h" 1 3 # 39 "/usr/include/bits/sched.h" 3 # 72 "/usr/include/bits/sched.h" 3 struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) __attribute__ ((__nothrow__)); extern int unshare (int __flags) __attribute__ ((__nothrow__)); extern int sched_getcpu (void) __attribute__ ((__nothrow__)); struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 163 "/usr/include/bits/sched.h" 3 # 182 "/usr/include/bits/sched.h" 3 # 193 "/usr/include/bits/sched.h" 3 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__)); # 44 "/usr/include/sched.h" 2 3 extern int sched_setparam (__pid_t __pid, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_setscheduler (__pid_t __pid, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__)); extern int sched_yield (void) __attribute__ ((__nothrow__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__)); # 125 "/usr/include/sched.h" 3 # 26 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/time.h" 1 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 # 46 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 65 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 39 "/usr/include/time.h" 2 3 # 1 "/usr/include/bits/time.h" 1 3 # 43 "/usr/include/bits/time.h" 3 # 43 "/usr/include/time.h" 2 3 typedef __clock_t clock_t; # 84 "/usr/include/time.h" 3 typedef __clockid_t clockid_t; typedef __timer_t timer_t; # 128 "/usr/include/time.h" 3 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; # 178 "/usr/include/time.h" 3 extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 211 "/usr/include/time.h" 3 # 1 "/usr/include/xlocale.h" 1 3 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 401 "/usr/include/time.h" 3 # 416 "/usr/include/time.h" 3 # 27 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 # 46 "/usr/include/bits/pthreadtypes.h" 3 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 72 "/usr/include/bits/pthreadtypes.h" 3 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 29 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/setjmp.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 28 "/usr/include/bits/setjmp.h" 2 3 typedef long int __jmp_buf[8]; # 30 "/usr/include/pthread.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 31 "/usr/include/pthread.h" 2 3 enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL }; enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; # 85 "/usr/include/pthread.h" 3 # 111 "/usr/include/pthread.h" 3 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; # 144 "/usr/include/pthread.h" 3 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t *__restrict __newthread, __const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); extern int pthread_join (pthread_t __th, void **__thread_return); # 258 "/usr/include/pthread.h" 3 extern int pthread_detach (pthread_t __th) __attribute__ ((__nothrow__)); extern pthread_t pthread_self (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) __attribute__ ((__nothrow__)); extern int pthread_attr_init (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_destroy (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getdetachstate (__const pthread_attr_t *__attr, int *__detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getguardsize (__const pthread_attr_t *__attr, size_t *__guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getschedparam (__const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, __const struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_getschedpolicy (__const pthread_attr_t *__restrict __attr, int *__restrict __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getinheritsched (__const pthread_attr_t *__restrict __attr, int *__restrict __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getscope (__const pthread_attr_t *__restrict __attr, int *__restrict __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstackaddr (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) __attribute__ ((__deprecated__)); extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)); extern int pthread_attr_getstacksize (__const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstack (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 407 "/usr/include/pthread.h" 3 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))); extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int pthread_setschedprio (pthread_t __target_thread, int __prio) __attribute__ ((__nothrow__)); # 438 "/usr/include/pthread.h" 3 # 447 "/usr/include/pthread.h" 3 # 467 "/usr/include/pthread.h" 3 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; # 641 "/usr/include/pthread.h" 3 # 664 "/usr/include/pthread.h" 3 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; # 676 "/usr/include/pthread.h" 3 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; # 715 "/usr/include/pthread.h" 3 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __attribute__ ((__nothrow__)); extern int pthread_mutex_init (pthread_mutex_t *__mutex, __const pthread_mutexattr_t *__mutexattr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_lock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_getprioceiling (__const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getpshared (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_gettype (__const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprotocol (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprioceiling (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getrobust (__const pthread_mutexattr_t *__attr, int *__robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 865 "/usr/include/pthread.h" 3 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, __const pthread_rwlockattr_t *__restrict __attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getpshared (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getkind_np (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_init (pthread_cond_t *__restrict __cond, __const pthread_condattr_t *__restrict __cond_attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_destroy (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_signal (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_broadcast (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) __attribute__ ((__nonnull__ (1, 2))); Found header files ['pthread.h'] in ['/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c" 2 # 1 "/usr/include/sys/sysctl.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 23 "/usr/include/sys/sysctl.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 1 3 typedef long ptrdiff_t; # 44 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 typedef unsigned long size_t; typedef int wchar_t; # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stddef.h" 3 # 25 "/usr/include/sys/sysctl.h" 2 3 # 43 "/usr/include/sys/sysctl.h" 3 # 1 "/usr/include/linux/sysctl.h" 1 3 # 1 "/usr/include/linux/kernel.h" 1 3 # 29 "/usr/include/linux/sysctl.h" 2 3 # 1 "/usr/include/linux/types.h" 1 3 # 30 "/usr/include/linux/sysctl.h" 2 3 struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, NET_IPV4_CONF_ARP_NOTIFY=22, NET_IPV4_CONF_ACCEPT_LOCAL=23, NET_IPV4_CONF_SRC_VMARK=24, NET_IPV4_CONF_PROXY_ARP_PVLAN=25, NET_IPV4_CONF_ROUTE_LOCALNET=26, __NET_IPV4_CONF_MAX }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; # 45 "/usr/include/sys/sysctl.h" 2 3 # 63 "/usr/include/sys/sysctl.h" 3 extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) __attribute__ ((__nothrow__)); # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread/conftest.c" 2 Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from PETSc.packages.pthread(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.pthread(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pthreadclasses(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.pthreadclasses(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.openmp(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.openmp(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ctetgen(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.ctetgen(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ccafe(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.ccafe(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default PETSc clone, checking for c2html Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/c2html...not found Checking for program /global/homes/m/madams/git-fat/c2html...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/c2html...not found Checking for program /usr/common/usg/bin/c2html...not found Checking for program /usr/common/mss/bin/c2html...not found Checking for program /usr/common/nsg/bin/c2html...not found Checking for program /usr/lib64/qt-3.3/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64_mic/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/gdb/intel64/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/debugger/python/intel64/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/impi/5.0.0.035/intel64/bin/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mpirt/bin/intel64/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64/c2html...not found Checking for program /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/bin/intel64_mic/c2html...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/sbin/c2html...not found Checking for program /usr/syscom/nsg/opt/moab/7.2.6/bin/c2html...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/sbin/c2html...not found Checking for program /usr/syscom/nsg/opt/torque/4.2.6/bin/c2html...not found Checking for program /usr/syscom/nsg/sbin/c2html...not found Checking for program /usr/syscom/nsg/bin/c2html...not found Checking for program /usr/share/Modules/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /usr/local/sbin/c2html...not found Checking for program /usr/sbin/c2html...not found Checking for program /sbin/c2html...not found Checking for program /global/homes/m/madams/c2html...not found Checking for program /global/homes/m/madams/petsc/bin/win32fe/c2html...not found Installing c2html Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.c2html(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.c2html(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional c2html Looking for C2HTML in directory starting with c2html Found a copy of C2HTML in c2html-0.9.4 Do not need to rebuild c2html Defined make macro "C2HTML" to "/chos/global/u2/m/madams/petsc/arch-knc-opt/bin/c2html" Not checking for library in Download C2HTML: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Download C2HTML: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] ================================================================================ TEST checkSharedLibrary from PETSc.packages.c2html(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.c2html(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.babel(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.babel(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PVODE(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.PVODE(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.P3Dlib(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.P3Dlib(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Suggar(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Suggar(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Numpy(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Numpy(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Mathematica(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Mathematica(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PTScotch(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.PTScotch(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Generator(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Generator(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.FFC(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.FFC(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.X(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.X(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.afterimage(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.afterimage(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Triangle(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Triangle(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Checking for program /usr/common/usg/totalview/toolworks/totalview.8T.12.0-1/bin/cmake...not found Checking for program /global/homes/m/madams/git-fat/cmake...not found Checking for program /usr/common/usg/cmake/3.0.1/bin/cmake...found Defined make macro "CMAKE" to "/usr/common/usg/cmake/3.0.1/bin/cmake" Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.metis(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional metis Looking for METIS in directory starting with metis Found a copy of METIS in metis-5.0.2-p3 Pushing language C Popping language C Do not need to rebuild metis Checking for library in Download METIS: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libmetis.a'] Contents: ['conf', 'include', 'lib', 'bin', 'externalpackages', 'share', 'man', 'doc', 'obj'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [METIS_PartGraphKway] in library ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libmetis.a'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char METIS_PartGraphKway(); static void _check_METIS_PartGraphKway() { METIS_PartGraphKway(); } int main() { _check_METIS_PartGraphKway();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBMETIS" to "1" Popping language C Checking for headers Download METIS: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['metis.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" 1 # 76 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" # 1 "/usr/include/inttypes.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/inttypes.h" 2 3 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 29 "/usr/include/inttypes.h" 2 3 typedef int __gwchar_t; # 43 "/usr/include/inttypes.h" 3 # 56 "/usr/include/inttypes.h" 3 # 163 "/usr/include/inttypes.h" 3 # 172 "/usr/include/inttypes.h" 3 typedef struct { long int quot; long int rem; } imaxdiv_t; # 295 "/usr/include/inttypes.h" 3 extern intmax_t imaxabs (intmax_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern imaxdiv_t imaxdiv (intmax_t __numer, intmax_t __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern intmax_t strtoimax (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)); extern uintmax_t strtoumax (__const char *__restrict __nptr, char ** __restrict __endptr, int __base) __attribute__ ((__nothrow__)); extern intmax_t wcstoimax (__const __gwchar_t *__restrict __nptr, __gwchar_t **__restrict __endptr, int __base) __attribute__ ((__nothrow__)); extern uintmax_t wcstoumax (__const __gwchar_t *__restrict __nptr, __gwchar_t ** __restrict __endptr, int __base) __attribute__ ((__nothrow__)); extern long int __strtol_internal (__const char *__restrict __nptr, char **__restrict __endptr, int __base, int __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern __inline intmax_t __attribute__ ((__nothrow__)) strtoimax (__const char *__restrict nptr, char * *__restrict endptr, int base) { return __strtol_internal (nptr, endptr, base, 0); } extern unsigned long int __strtoul_internal (__const char * __restrict __nptr, char ** __restrict __endptr, int __base, int __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern __inline uintmax_t __attribute__ ((__nothrow__)) strtoumax (__const char *__restrict nptr, char * *__restrict endptr, int base) { return __strtoul_internal (nptr, endptr, base, 0); } extern long int __wcstol_internal (__const __gwchar_t * __restrict __nptr, __gwchar_t **__restrict __endptr, int __base, int __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern __inline intmax_t __attribute__ ((__nothrow__)) wcstoimax (__const __gwchar_t *__restrict nptr, __gwchar_t * *__restrict endptr, int base) { return __wcstol_internal (nptr, endptr, base, 0); } extern unsigned long int __wcstoul_internal (__const __gwchar_t * __restrict __nptr, __gwchar_t ** __restrict __endptr, int __base, int __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern __inline uintmax_t __attribute__ ((__nothrow__)) wcstoumax (__const __gwchar_t *__restrict nptr, __gwchar_t * *__restrict endptr, int base) { return __wcstoul_internal (nptr, endptr, base, 0); } # 441 "/usr/include/inttypes.h" 3 # 95 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" 2 typedef int32_t idx_t; # 131 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" # 151 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" typedef double real_t; # 192 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/metis.h" int METIS_PartGraphRecursive(idx_t *nvtxs, idx_t *ncon, idx_t *xadj, idx_t *adjncy, idx_t *vwgt, idx_t *vsize, idx_t *adjwgt, idx_t *nparts, real_t *tpwgts, real_t *ubvec, idx_t *options, idx_t *edgecut, idx_t *part); int METIS_PartGraphKway(idx_t *nvtxs, idx_t *ncon, idx_t *xadj, idx_t *adjncy, idx_t *vwgt, idx_t *vsize, idx_t *adjwgt, idx_t *nparts, real_t *tpwgts, real_t *ubvec, idx_t *options, idx_t *edgecut, idx_t *part); int METIS_MeshToDual(idx_t *ne, idx_t *nn, idx_t *eptr, idx_t *eind, idx_t *ncommon, idx_t *numflag, idx_t **r_xadj, idx_t **r_adjncy); int METIS_MeshToNodal(idx_t *ne, idx_t *nn, idx_t *eptr, idx_t *eind, idx_t *numflag, idx_t **r_xadj, idx_t **r_adjncy); int METIS_PartMeshNodal(idx_t *ne, idx_t *nn, idx_t *eptr, idx_t *eind, idx_t *vwgt, idx_t *vsize, idx_t *nparts, real_t *tpwgts, idx_t *options, idx_t *objval, idx_t *epart, idx_t *npart); int METIS_PartMeshDual(idx_t *ne, idx_t *nn, idx_t *eptr, idx_t *eind, idx_t *vwgt, idx_t *vsize, idx_t *ncommon, idx_t *nparts, real_t *tpwgts, idx_t *options, idx_t *objval, idx_t *epart, idx_t *npart); int METIS_NodeND(idx_t *nvtxs, idx_t *xadj, idx_t *adjncy, idx_t *vwgt, idx_t *options, idx_t *perm, idx_t *iperm); int METIS_Free(void *ptr); int METIS_SetDefaultOptions(idx_t *options); int METIS_NodeNDP(idx_t nvtxs, idx_t *xadj, idx_t *adjncy, idx_t *vwgt, idx_t npes, idx_t *options, idx_t *perm, idx_t *iperm, idx_t *sizes); int METIS_ComputeVertexSeparator(idx_t *nvtxs, idx_t *xadj, idx_t *adjncy, idx_t *vwgt, idx_t *options, idx_t *sepsize, idx_t *part); int METIS_NodeRefine(idx_t nvtxs, idx_t *xadj, idx_t *vwgt, idx_t *adjncy, idx_t *where, idx_t *hmarker, real_t ubfactor); typedef enum { METIS_OK = 1, METIS_ERROR_INPUT = -2, METIS_ERROR_MEMORY = -3, METIS_ERROR = -4 } rstatus_et; typedef enum { METIS_OP_PMETIS, METIS_OP_KMETIS, METIS_OP_OMETIS } moptype_et; typedef enum { METIS_OPTION_PTYPE, METIS_OPTION_OBJTYPE, METIS_OPTION_CTYPE, METIS_OPTION_IPTYPE, METIS_OPTION_RTYPE, METIS_OPTION_DBGLVL, METIS_OPTION_NITER, METIS_OPTION_NCUTS, METIS_OPTION_SEED, METIS_OPTION_MINCONN, METIS_OPTION_CONTIG, METIS_OPTION_COMPRESS, METIS_OPTION_CCORDER, METIS_OPTION_PFACTOR, METIS_OPTION_NSEPS, METIS_OPTION_UFACTOR, METIS_OPTION_NUMBERING, METIS_OPTION_HELP, METIS_OPTION_TPWGTS, METIS_OPTION_NCOMMON, METIS_OPTION_NOOUTPUT, METIS_OPTION_BALANCE, METIS_OPTION_GTYPE, METIS_OPTION_UBVEC } moptions_et; typedef enum { METIS_PTYPE_RB, METIS_PTYPE_KWAY } mptype_et; typedef enum { METIS_GTYPE_DUAL, METIS_GTYPE_NODAL } mgtype_et; typedef enum { METIS_CTYPE_RM, METIS_CTYPE_SHEM } mctype_et; typedef enum { METIS_IPTYPE_GROW, METIS_IPTYPE_RANDOM, METIS_IPTYPE_EDGE, METIS_IPTYPE_NODE, METIS_IPTYPE_METISRB } miptype_et; typedef enum { METIS_RTYPE_FM, METIS_RTYPE_GREEDY, METIS_RTYPE_SEP2SIDED, METIS_RTYPE_SEP1SIDED } mrtype_et; typedef enum { METIS_DBG_INFO = 1, METIS_DBG_TIME = 2, METIS_DBG_COARSEN = 4, METIS_DBG_REFINE = 8, METIS_DBG_IPART = 16, METIS_DBG_MOVEINFO = 32, METIS_DBG_SEPINFO = 64, METIS_DBG_CONNINFO = 128, METIS_DBG_CONTIGINFO = 256, METIS_DBG_MEMORY = 2048, } mdbglvl_et; typedef enum { METIS_OBJTYPE_CUT, METIS_OBJTYPE_VOL, METIS_OBJTYPE_NODE } mobjtype_et; # 4 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 Found header files ['metis.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.metis(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.parmetis(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional parmetis Looking for PARMETIS in directory starting with parmetis Found a copy of PARMETIS in parmetis-4.0.2-p5 Pushing language C Popping language C Do not need to rebuild parmetis Checking for library in Download PARMETIS: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libparmetis.a'] Contents: ['conf', 'include', 'lib', 'bin', 'externalpackages', 'share', 'man', 'doc', 'obj'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [ParMETIS_V3_PartKway] in library ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libparmetis.a'] ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libmetis.a'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ParMETIS_V3_PartKway(); static void _check_ParMETIS_V3_PartKway() { ParMETIS_V3_PartKway(); } int main() { _check_ParMETIS_V3_PartKway();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lparmetis -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBPARMETIS" to "1" Popping language C Checking for headers Download PARMETIS: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['parmetis.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include', '/chos/global/u2/m/madams/petsc/arch-knc-opt/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/parmetis.h" 1 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 82 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 2 # 88 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Datatype; # 118 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 137 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 146 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 161 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 174 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 184 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Comm; typedef int MPI_Group; typedef int MPI_Win; typedef struct ADIOI_FileD *MPI_File; typedef int MPI_Op; # 238 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 259 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 273 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern int MPICH_ATTR_FAILED_PROCESSES; typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; typedef int MPI_Errhandler; # 353 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Request; typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPI_COMBINER_STRUCT_INTEGER = 11, MPI_COMBINER_STRUCT = 12, MPI_COMBINER_SUBARRAY = 13, MPI_COMBINER_DARRAY = 14, MPI_COMBINER_F90_REAL = 15, MPI_COMBINER_F90_COMPLEX = 16, MPI_COMBINER_F90_INTEGER = 17, MPI_COMBINER_RESIZED = 18 }; typedef int MPI_Info; # 440 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef long MPI_Aint; typedef int MPI_Fint; typedef long long MPI_Offset; typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; # 495 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 513 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern MPI_Fint * MPI_F_STATUS_IGNORE; extern MPI_Fint * MPI_F_STATUSES_IGNORE; typedef int (MPI_Grequest_cancel_function)(void *, int); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); # 554 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 591 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 608 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 617 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype datatype, MPI_Aint *, void *); int MPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Get_count(MPI_Status *, MPI_Datatype, int *); int MPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Buffer_attach( void*, int); int MPI_Buffer_detach( void*, int *); int MPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Wait(MPI_Request *, MPI_Status *); int MPI_Test(MPI_Request *, int *, MPI_Status *); int MPI_Request_free(MPI_Request *); int MPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int MPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Waitall(int, MPI_Request *, MPI_Status *); int MPI_Testall(int, MPI_Request *, int *, MPI_Status *); int MPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int MPI_Probe(int, int, MPI_Comm, MPI_Status *); int MPI_Cancel(MPI_Request *); int MPI_Test_cancelled(MPI_Status *, int *); int MPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Bsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Ssend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Rsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Recv_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Start(MPI_Request *); int MPI_Startall(int, MPI_Request *); int MPI_Sendrecv(void *, int, MPI_Datatype,int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int MPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int MPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int MPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int MPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int MPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int MPI_Address(void*, MPI_Aint *); int MPI_Type_extent(MPI_Datatype, MPI_Aint *); int MPI_Type_size(MPI_Datatype, int *); int MPI_Type_lb(MPI_Datatype, MPI_Aint *); int MPI_Type_ub(MPI_Datatype, MPI_Aint *); int MPI_Type_commit(MPI_Datatype *); int MPI_Type_free(MPI_Datatype *); int MPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int MPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int MPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int MPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int MPI_Barrier(MPI_Comm ); int MPI_Bcast(void*, int, MPI_Datatype, int, MPI_Comm ); int MPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int MPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Scatterv(void* , int *, int *, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int MPI_Op_create(MPI_User_function *, int, MPI_Op *); int MPI_Op_free( MPI_Op *); int MPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int MPI_Group_size(MPI_Group, int *); int MPI_Group_rank(MPI_Group, int *); int MPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int MPI_Group_compare(MPI_Group, MPI_Group, int *); int MPI_Comm_group(MPI_Comm, MPI_Group *); int MPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_free(MPI_Group *); int MPI_Comm_size(MPI_Comm, int *); int MPI_Comm_rank(MPI_Comm, int *); int MPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int MPI_Comm_dup(MPI_Comm, MPI_Comm *); int MPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int MPI_Comm_free(MPI_Comm *); int MPI_Comm_test_inter(MPI_Comm, int *); int MPI_Comm_remote_size(MPI_Comm, int *); int MPI_Comm_remote_group(MPI_Comm, MPI_Group *); int MPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm * ); int MPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int MPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int MPI_Keyval_free(int *); int MPI_Attr_put(MPI_Comm, int, void*); int MPI_Attr_get(MPI_Comm, int, void *, int *); int MPI_Attr_delete(MPI_Comm, int); int MPI_Topo_test(MPI_Comm, int *); int MPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Dims_create(int, int, int *); int MPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Graphdims_get(MPI_Comm, int *, int *); int MPI_Graph_get(MPI_Comm, int, int, int *, int *); int MPI_Cartdim_get(MPI_Comm, int *); int MPI_Cart_get(MPI_Comm, int, int *, int *, int *); int MPI_Cart_rank(MPI_Comm, int *, int *); int MPI_Cart_coords(MPI_Comm, int, int, int *); int MPI_Graph_neighbors_count(MPI_Comm, int, int *); int MPI_Graph_neighbors(MPI_Comm, int, int, int *); int MPI_Cart_shift(MPI_Comm, int, int, int *, int *); int MPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int MPI_Cart_map(MPI_Comm, int, int *, int *, int *); int MPI_Graph_map(MPI_Comm, int, int *, int *, int *); int MPI_Get_processor_name(char *, int *); int MPI_Get_version(int *, int *); int MPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int MPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int MPI_Errhandler_free(MPI_Errhandler *); int MPI_Error_string(int, char *, int *); int MPI_Error_class(int, int *); double MPI_Wtime(void); double MPI_Wtick(void); double PMPI_Wtime(void); double PMPI_Wtick(void); int MPI_Init(int *, char ***); int MPI_Finalize(void); int MPI_Initialized(int *); int MPI_Abort(MPI_Comm, int); int MPI_Pcontrol(const int, ...); int MPIR_Dup_fn ( MPI_Comm, int, void *, void *, void *, int * ); int MPI_Close_port(char *); int MPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_disconnect(MPI_Comm *); int MPI_Comm_get_parent(MPI_Comm *); int MPI_Comm_join(int, MPI_Comm *); int MPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int MPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int MPI_Lookup_name(char *, MPI_Info, char *); int MPI_Open_port(MPI_Info, char *); int MPI_Publish_name(char *, MPI_Info, char *); int MPI_Unpublish_name(char *, MPI_Info, char *); int MPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int MPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Win_complete(MPI_Win); int MPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int MPI_Win_fence(int, MPI_Win); int MPI_Win_free(MPI_Win *); int MPI_Win_get_group(MPI_Win, MPI_Group *); int MPI_Win_lock(int, int, int, MPI_Win); int MPI_Win_post(MPI_Group, int, MPI_Win); int MPI_Win_start(MPI_Group, int, MPI_Win); int MPI_Win_test(MPI_Win, int *); int MPI_Win_unlock(int, MPI_Win); int MPI_Win_wait(MPI_Win); int MPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int MPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Add_error_class(int *); int MPI_Add_error_code(int, int *); int MPI_Add_error_string(int, char *); int MPI_Comm_call_errhandler(MPI_Comm, int); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int MPI_Comm_delete_attr(MPI_Comm, int); int MPI_Comm_free_keyval(int *); int MPI_Comm_get_attr(MPI_Comm, int, void *, int *); int MPI_Comm_get_name(MPI_Comm, char *, int *); int MPI_Comm_set_attr(MPI_Comm, int, void *); int MPI_Comm_set_name(MPI_Comm, char *); int MPI_File_call_errhandler(MPI_File, int); int MPI_Grequest_complete(MPI_Request); int MPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int MPI_Init_thread(int *, char ***, int, int *); int MPI_Is_thread_main(int *); int MPI_Query_thread(int *); int MPI_Status_set_cancelled(MPI_Status *, int); int MPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int MPI_Type_delete_attr(MPI_Datatype, int); int MPI_Type_dup(MPI_Datatype, MPI_Datatype *); int MPI_Type_free_keyval(int *); int MPI_Type_get_attr(MPI_Datatype, int, void *, int *); int MPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int MPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int MPI_Type_get_name(MPI_Datatype, char *, int *); int MPI_Type_set_attr(MPI_Datatype, int, void *); int MPI_Type_set_name(MPI_Datatype, char *); int MPI_Type_match_size( int, int, MPI_Datatype *); int MPI_Win_call_errhandler(MPI_Win, int); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int MPI_Win_delete_attr(MPI_Win, int); int MPI_Win_free_keyval(int *); int MPI_Win_get_attr(MPI_Win, int, void *, int *); int MPI_Win_get_name(MPI_Win, char *, int *); int MPI_Win_set_attr(MPI_Win, int, void *); int MPI_Win_set_name(MPI_Win, char *); # 901 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" int MPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int MPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int MPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int MPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int MPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int MPI_File_set_errhandler(MPI_File, MPI_Errhandler); int MPI_Finalized(int *); int MPI_Free_mem(void *); int MPI_Get_address(void *, MPI_Aint *); int MPI_Info_create(MPI_Info *); int MPI_Info_delete(MPI_Info, char *); int MPI_Info_dup(MPI_Info, MPI_Info *); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info, char *, int, char *, int *); int MPI_Info_get_nkeys(MPI_Info, int *); int MPI_Info_get_nthkey(MPI_Info, int, char *); int MPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int MPI_Info_set(MPI_Info, char *, char *); int MPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int MPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int MPI_Request_get_status(MPI_Request, int *, MPI_Status *); int MPI_Status_c2f(MPI_Status *, MPI_Fint *); int MPI_Status_f2c(MPI_Fint *, MPI_Status *); int MPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int MPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int MPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int MPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int MPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int MPI_Type_create_f90_integer( int, MPI_Datatype * ); int MPI_Type_create_f90_real( int, int, MPI_Datatype * ); int MPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); int PMPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Get_count(MPI_Status *, MPI_Datatype, int *); int PMPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Buffer_attach( void* buffer, int); int PMPI_Buffer_detach( void* buffer, int *); int PMPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Wait(MPI_Request *, MPI_Status *); int PMPI_Test(MPI_Request *, int *, MPI_Status *); int PMPI_Request_free(MPI_Request *); int PMPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int PMPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Waitall(int, MPI_Request *, MPI_Status *); int PMPI_Testall(int, MPI_Request *, int *, MPI_Status *); int PMPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int PMPI_Probe(int, int, MPI_Comm, MPI_Status *); int PMPI_Cancel(MPI_Request *); int PMPI_Test_cancelled(MPI_Status *, int *); int PMPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Bsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ssend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Rsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Recv_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Start(MPI_Request *); int PMPI_Startall(int, MPI_Request *); int PMPI_Sendrecv(void *, int, MPI_Datatype, int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int PMPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int PMPI_Address(void*, MPI_Aint *); int PMPI_Type_extent(MPI_Datatype, MPI_Aint *); int PMPI_Type_size(MPI_Datatype, int *); int PMPI_Type_lb(MPI_Datatype, MPI_Aint *); int PMPI_Type_ub(MPI_Datatype, MPI_Aint *); int PMPI_Type_commit(MPI_Datatype *); int PMPI_Type_free(MPI_Datatype *); int PMPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int PMPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int PMPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int PMPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int PMPI_Barrier(MPI_Comm ); int PMPI_Bcast(void* buffer, int, MPI_Datatype, int, MPI_Comm ); int PMPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int PMPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Scatterv(void* , int *, int *displs, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int PMPI_Op_create(MPI_User_function *, int, MPI_Op *); int PMPI_Op_free( MPI_Op *); int PMPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int PMPI_Group_size(MPI_Group, int *); int PMPI_Group_rank(MPI_Group, int *); int PMPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int PMPI_Group_compare(MPI_Group, MPI_Group, int *); int PMPI_Comm_group(MPI_Comm, MPI_Group *); int PMPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_free(MPI_Group *); int PMPI_Comm_size(MPI_Comm, int *); int PMPI_Comm_rank(MPI_Comm, int *); int PMPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int PMPI_Comm_dup(MPI_Comm, MPI_Comm *); int PMPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int PMPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int PMPI_Comm_free(MPI_Comm *); int PMPI_Comm_test_inter(MPI_Comm, int *); int PMPI_Comm_remote_size(MPI_Comm, int *); int PMPI_Comm_remote_group(MPI_Comm, MPI_Group *); int PMPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm *); int PMPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int PMPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int PMPI_Keyval_free(int *); int PMPI_Attr_put(MPI_Comm, int, void*); int PMPI_Attr_get(MPI_Comm, int, void *, int *); int PMPI_Attr_delete(MPI_Comm, int); int PMPI_Topo_test(MPI_Comm, int *); int PMPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Dims_create(int, int, int *); int PMPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Graphdims_get(MPI_Comm, int *, int *); int PMPI_Graph_get(MPI_Comm, int, int, int *, int *); int PMPI_Cartdim_get(MPI_Comm, int *); int PMPI_Cart_get(MPI_Comm, int, int *, int *, int *); int PMPI_Cart_rank(MPI_Comm, int *, int *); int PMPI_Cart_coords(MPI_Comm, int, int, int *); int PMPI_Graph_neighbors_count(MPI_Comm, int, int *); int PMPI_Graph_neighbors(MPI_Comm, int, int, int *); int PMPI_Cart_shift(MPI_Comm, int, int, int *, int *); int PMPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int PMPI_Cart_map(MPI_Comm, int, int *, int *, int *); int PMPI_Graph_map(MPI_Comm, int, int *, int *, int *); int PMPI_Get_processor_name(char *, int *); int PMPI_Get_version(int *, int *); int PMPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int PMPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int PMPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int PMPI_Errhandler_free(MPI_Errhandler *); int PMPI_Error_string(int, char *, int *); int PMPI_Error_class(int, int *); int PMPI_Init(int *, char ***); int PMPI_Finalize(void); int PMPI_Initialized(int *); int PMPI_Abort(MPI_Comm, int); int PMPI_Pcontrol(const int, ...); int PMPI_Close_port(char *); int PMPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_disconnect(MPI_Comm *); int PMPI_Comm_get_parent(MPI_Comm *); int PMPI_Comm_join(int, MPI_Comm *); int PMPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int PMPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int PMPI_Lookup_name(char *, MPI_Info, char *); int PMPI_Open_port(MPI_Info, char *); int PMPI_Publish_name(char *, MPI_Info, char *); int PMPI_Unpublish_name(char *, MPI_Info, char *); int PMPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int PMPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Win_complete(MPI_Win); int PMPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int PMPI_Win_fence(int, MPI_Win); int PMPI_Win_free(MPI_Win *); int PMPI_Win_get_group(MPI_Win, MPI_Group *); int PMPI_Win_lock(int, int, int, MPI_Win); int PMPI_Win_post(MPI_Group, int, MPI_Win); int PMPI_Win_start(MPI_Group, int, MPI_Win); int PMPI_Win_test(MPI_Win, int *); int PMPI_Win_unlock(int, MPI_Win); int PMPI_Win_wait(MPI_Win); int PMPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int PMPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Add_error_class(int *); int PMPI_Add_error_code(int, int *); int PMPI_Add_error_string(int, char *); int PMPI_Comm_call_errhandler(MPI_Comm, int); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int PMPI_Comm_delete_attr(MPI_Comm, int); int PMPI_Comm_free_keyval(int *); int PMPI_Comm_get_attr(MPI_Comm, int, void *, int *); int PMPI_Comm_get_name(MPI_Comm, char *, int *); int PMPI_Comm_set_attr(MPI_Comm, int, void *); int PMPI_Comm_set_name(MPI_Comm, char *); int PMPI_File_call_errhandler(MPI_File, int); int PMPI_Grequest_complete(MPI_Request); int PMPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int PMPI_Init_thread(int *, char ***, int, int *); int PMPI_Is_thread_main(int *); int PMPI_Query_thread(int *); int PMPI_Status_set_cancelled(MPI_Status *, int); int PMPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int PMPI_Type_delete_attr(MPI_Datatype, int); int PMPI_Type_dup(MPI_Datatype, MPI_Datatype *); int PMPI_Type_free_keyval(int *); int PMPI_Type_get_attr(MPI_Datatype, int, void *, int *); int PMPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int PMPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int PMPI_Type_get_name(MPI_Datatype, char *, int *); int PMPI_Type_set_attr(MPI_Datatype, int, void *); int PMPI_Type_set_name(MPI_Datatype, char *); int PMPI_Type_match_size( int, int, MPI_Datatype *); int PMPI_Win_call_errhandler(MPI_Win, int); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int PMPI_Win_delete_attr(MPI_Win, int); int PMPI_Win_free_keyval(int *); int PMPI_Win_get_attr(MPI_Win, int, void *, int *); int PMPI_Win_get_name(MPI_Win, char *, int *); int PMPI_Win_set_attr(MPI_Win, int, void *); int PMPI_Win_set_name(MPI_Win, char *); int PMPI_Type_create_f90_integer( int, MPI_Datatype * ); int PMPI_Type_create_f90_real( int, int, MPI_Datatype * ); int PMPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int PMPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int PMPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int PMPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int PMPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int PMPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int PMPI_File_set_errhandler(MPI_File, MPI_Errhandler); int PMPI_Finalized(int *); int PMPI_Free_mem(void *); int PMPI_Get_address(void *, MPI_Aint *); int PMPI_Info_create(MPI_Info *); int PMPI_Info_delete(MPI_Info, char *); int PMPI_Info_dup(MPI_Info, MPI_Info *); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info, char *, int, char *, int *); int PMPI_Info_get_nkeys(MPI_Info, int *); int PMPI_Info_get_nthkey(MPI_Info, int, char *); int PMPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int PMPI_Info_set(MPI_Info, char *, char *); int PMPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int PMPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int PMPI_Request_get_status(MPI_Request, int *, MPI_Status *); int PMPI_Status_c2f(MPI_Status *, MPI_Fint *); int PMPI_Status_f2c(MPI_Fint *, MPI_Status *); int PMPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int PMPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int PMPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int PMPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int PMPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); # 1262 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 1 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 83 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 2 # 102 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 109 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 122 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 139 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 149 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 159 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 177 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" int MPI_File_open(MPI_Comm, char *, int, MPI_Info, MPI_File *); int MPI_File_close(MPI_File *); int MPI_File_delete(char *, MPI_Info); int MPI_File_set_size(MPI_File, MPI_Offset); int MPI_File_preallocate(MPI_File, MPI_Offset); int MPI_File_get_size(MPI_File, MPI_Offset *); int MPI_File_get_group(MPI_File, MPI_Group *); int MPI_File_get_amode(MPI_File, int *); int MPI_File_set_info(MPI_File, MPI_Info); int MPI_File_get_info(MPI_File, MPI_Info *); int MPI_File_set_view(MPI_File, MPI_Offset, MPI_Datatype, MPI_Datatype, char *, MPI_Info); int MPI_File_get_view(MPI_File, MPI_Offset *, MPI_Datatype *, MPI_Datatype *, char *); int MPI_File_read_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_seek(MPI_File, MPI_Offset, int); int MPI_File_get_position(MPI_File, MPI_Offset *); int MPI_File_get_byte_offset(MPI_File, MPI_Offset, MPI_Offset *); int MPI_File_read_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_seek_shared(MPI_File, MPI_Offset, int); int MPI_File_get_position_shared(MPI_File, MPI_Offset *); int MPI_File_read_at_all_begin(MPI_File, MPI_Offset, void *, int, MPI_Datatype); int MPI_File_read_at_all_end(MPI_File, void *, MPI_Status *); int MPI_File_write_at_all_begin(MPI_File, MPI_Offset, void *, int, MPI_Datatype); int MPI_File_write_at_all_end(MPI_File, void *, MPI_Status *); int MPI_File_read_all_begin(MPI_File, void *, int, MPI_Datatype); int MPI_File_read_all_end(MPI_File, void *, MPI_Status *); Found header files ['parmetis.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.parmetis(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Zoltan(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.Zoltan(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:318) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:318) ================================================================================ Checking for a functional BLAS and LAPACK in IRIX Mathematics library ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['libcomplib.sgimath.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcomplib.sgimath -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcomplib.sgimath Popping language C Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libcomplib.sgimath.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcomplib.sgimath -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcomplib.sgimath Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for functions [ddot_] in library ['libcomplib.sgimath.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcomplib.sgimath -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcomplib.sgimath Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in Another IRIX Mathematics library ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['libscs.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lscs -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lscs Popping language C Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libscs.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lscs -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lscs Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for functions [ddot_] in library ['libscs.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lscs -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lscs Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in Compaq/Alpha Mathematics library ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['libcxml.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcxml -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcxml Popping language C Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libcxml.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcxml -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcxml Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for functions [ddot_] in library ['libcxml.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lcxml -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lcxml Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in IBM ESSL Mathematics library ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['libessl.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lessl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lessl Popping language C Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libessl.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lessl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lessl Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for functions [ddot_] in library ['libessl.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lessl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lessl Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in IBM ESSL Mathematics library for Blue Gene ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['libesslbg.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lesslbg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lesslbg Popping language C Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libesslbg.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lesslbg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lesslbg Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for functions [ddot_] in library ['libesslbg.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -lesslbg -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: cannot find -lesslbg Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in Default compiler libraries ================================================================================ TEST checkLib from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:99) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:99) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library [''] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [dgetrs_] in library [''] ['', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C Checking for functions [dgeev_] in library [''] ['', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:437) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:437) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:377) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:377) Check for the IBM ESSL library Checking for functions [iessl] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `iessl' Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:389) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:389) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: exit code 256 stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o: In function `main': /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c:(.text+0x14): undefined reference to `ipessl' Popping language C ================================================================================ TEST checkMKL from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:383) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:383) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library [''] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:402) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:402) Check for missing LAPACK routines Checking for functions [dtrsen_ dgerfs_ dgges_ dtgsen_ dgesvd_ dgetrf_ dgetrs_ dgeev_ dgelss_ dsyev_ dsyevx_ dsygv_ dsygvx_ dpotrf_ dpotrs_ dstebz_ dpttrf_ dpttrs_ dstein_ dorgqr_ dgeqrf_ dgesv_ dhseqr_ dsteqr_] in library [''] ['', '-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } char dgeev_(); static void _check_dgeev_() { dgeev_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygv_(); static void _check_dsygv_() { dsygv_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } int main() { _check_dtrsen_(); _check_dgerfs_(); _check_dgges_(); _check_dtgsen_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetrs_(); _check_dgeev_(); _check_dgelss_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygv_(); _check_dsygvx_(); _check_dpotrf_(); _check_dpotrs_(); _check_dstebz_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstein_(); _check_dorgqr_(); _check_dgeqrf_(); _check_dgesv_(); _check_dhseqr_(); _check_dsteqr_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/packages/BlasLapack.py:415) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:415) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for functions [lsame_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sundials(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.sundials(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.oski(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.oski(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ml(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.ml(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mkl_pardiso(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.mkl_pardiso(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Checking for functions [slamch_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char slamch_(); static void _check_slamch_() { slamch_(); } int main() { _check_slamch_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found slamch() in BLAS library as needed by SuperLU_DIST Checking for functions [dlamch_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlamch_(); static void _check_dlamch_() { dlamch_(); } int main() { _check_dlamch_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found dlamch() in BLAS library as needed by SuperLU_DIST Checking for functions [xerbla_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char xerbla_(); static void _check_xerbla_() { xerbla_(); } int main() { _check_xerbla_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found xerbla() in BLAS library as needed by SuperLU_DIST Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.SuperLU_DIST(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.SuperLU_DIST(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional SuperLU_DIST Looking for SUPERLU_DIST in directory starting with SuperLU_DIST Found a copy of SUPERLU_DIST in SuperLU_DIST Pushing language C Popping language C Do not need to rebuild SuperLU_DIST Checking for library in Download SUPERLU_DIST: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libsuperlu_dist_3.3.a'] Contents: ['conf', 'include', 'lib', 'bin', 'externalpackages', 'share', 'man', 'doc', 'obj'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [set_default_options_dist] in library ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libsuperlu_dist_3.3.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or', '/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libparmetis.a', '/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libmetis.a'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char set_default_options_dist(); static void _check_set_default_options_dist() { set_default_options_dist(); } int main() { _check_set_default_options_dist();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_dist_3.3 -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lparmetis -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBSUPERLU_DIST_3" to "1" Popping language C Checking for headers Download SUPERLU_DIST: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['superlu_ddefs.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include', '/chos/global/u2/m/madams/petsc/arch-knc-opt/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/superlu_ddefs.h" 1 # 1 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/superlu_defs.h" 1 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 1 3 # 74 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 1 "/usr/include/stdint.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 27 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wchar.h" 1 3 # 28 "/usr/include/stdint.h" 2 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 29 "/usr/include/stdint.h" 2 3 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 102 "/usr/include/stdint.h" 3 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 115 "/usr/include/stdint.h" 3 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 131 "/usr/include/stdint.h" 3 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 143 "/usr/include/stdint.h" 3 # 156 "/usr/include/stdint.h" 3 # 205 "/usr/include/stdint.h" 3 # 215 "/usr/include/stdint.h" 3 # 226 "/usr/include/stdint.h" 3 # 238 "/usr/include/stdint.h" 3 # 259 "/usr/include/stdint.h" 3 # 298 "/usr/include/stdint.h" 3 # 308 "/usr/include/stdint.h" 3 # 317 "/usr/include/stdint.h" 3 # 76 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 2 3 # 85 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/stdint.h" 3 # 82 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 2 # 88 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Datatype; # 118 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 137 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 146 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 161 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 174 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 184 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Comm; typedef int MPI_Group; typedef int MPI_Win; typedef struct ADIOI_FileD *MPI_File; typedef int MPI_Op; # 238 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 259 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 273 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern int MPICH_ATTR_FAILED_PROCESSES; typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; typedef int MPI_Errhandler; # 353 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int MPI_Request; typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPI_COMBINER_STRUCT_INTEGER = 11, MPI_COMBINER_STRUCT = 12, MPI_COMBINER_SUBARRAY = 13, MPI_COMBINER_DARRAY = 14, MPI_COMBINER_F90_REAL = 15, MPI_COMBINER_F90_COMPLEX = 16, MPI_COMBINER_F90_INTEGER = 17, MPI_COMBINER_RESIZED = 18 }; typedef int MPI_Info; # 440 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef long MPI_Aint; typedef int MPI_Fint; typedef long long MPI_Offset; typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; # 495 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 513 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" extern MPI_Fint * MPI_F_STATUS_IGNORE; extern MPI_Fint * MPI_F_STATUSES_IGNORE; typedef int (MPI_Grequest_cancel_function)(void *, int); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); # 554 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 591 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 608 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 617 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype datatype, MPI_Aint *, void *); int MPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Get_count(MPI_Status *, MPI_Datatype, int *); int MPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int MPI_Buffer_attach( void*, int); int MPI_Buffer_detach( void*, int *); int MPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Wait(MPI_Request *, MPI_Status *); int MPI_Test(MPI_Request *, int *, MPI_Status *); int MPI_Request_free(MPI_Request *); int MPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int MPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Waitall(int, MPI_Request *, MPI_Status *); int MPI_Testall(int, MPI_Request *, int *, MPI_Status *); int MPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int MPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int MPI_Probe(int, int, MPI_Comm, MPI_Status *); int MPI_Cancel(MPI_Request *); int MPI_Test_cancelled(MPI_Status *, int *); int MPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int MPI_Bsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Ssend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Rsend_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Recv_init(void*, int, MPI_Datatype, int,int, MPI_Comm, MPI_Request *); int MPI_Start(MPI_Request *); int MPI_Startall(int, MPI_Request *); int MPI_Sendrecv(void *, int, MPI_Datatype,int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int MPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int MPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int MPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int MPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int MPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int MPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int MPI_Address(void*, MPI_Aint *); int MPI_Type_extent(MPI_Datatype, MPI_Aint *); int MPI_Type_size(MPI_Datatype, int *); int MPI_Type_lb(MPI_Datatype, MPI_Aint *); int MPI_Type_ub(MPI_Datatype, MPI_Aint *); int MPI_Type_commit(MPI_Datatype *); int MPI_Type_free(MPI_Datatype *); int MPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int MPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int MPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int MPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int MPI_Barrier(MPI_Comm ); int MPI_Bcast(void*, int, MPI_Datatype, int, MPI_Comm ); int MPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int MPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Scatterv(void* , int *, int *, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int MPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int MPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int MPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int MPI_Op_create(MPI_User_function *, int, MPI_Op *); int MPI_Op_free( MPI_Op *); int MPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int MPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int MPI_Group_size(MPI_Group, int *); int MPI_Group_rank(MPI_Group, int *); int MPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int MPI_Group_compare(MPI_Group, MPI_Group, int *); int MPI_Comm_group(MPI_Comm, MPI_Group *); int MPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int MPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int MPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int MPI_Group_free(MPI_Group *); int MPI_Comm_size(MPI_Comm, int *); int MPI_Comm_rank(MPI_Comm, int *); int MPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int MPI_Comm_dup(MPI_Comm, MPI_Comm *); int MPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int MPI_Comm_free(MPI_Comm *); int MPI_Comm_test_inter(MPI_Comm, int *); int MPI_Comm_remote_size(MPI_Comm, int *); int MPI_Comm_remote_group(MPI_Comm, MPI_Group *); int MPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm * ); int MPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int MPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int MPI_Keyval_free(int *); int MPI_Attr_put(MPI_Comm, int, void*); int MPI_Attr_get(MPI_Comm, int, void *, int *); int MPI_Attr_delete(MPI_Comm, int); int MPI_Topo_test(MPI_Comm, int *); int MPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Dims_create(int, int, int *); int MPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int MPI_Graphdims_get(MPI_Comm, int *, int *); int MPI_Graph_get(MPI_Comm, int, int, int *, int *); int MPI_Cartdim_get(MPI_Comm, int *); int MPI_Cart_get(MPI_Comm, int, int *, int *, int *); int MPI_Cart_rank(MPI_Comm, int *, int *); int MPI_Cart_coords(MPI_Comm, int, int, int *); int MPI_Graph_neighbors_count(MPI_Comm, int, int *); int MPI_Graph_neighbors(MPI_Comm, int, int, int *); int MPI_Cart_shift(MPI_Comm, int, int, int *, int *); int MPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int MPI_Cart_map(MPI_Comm, int, int *, int *, int *); int MPI_Graph_map(MPI_Comm, int, int *, int *, int *); int MPI_Get_processor_name(char *, int *); int MPI_Get_version(int *, int *); int MPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int MPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int MPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int MPI_Errhandler_free(MPI_Errhandler *); int MPI_Error_string(int, char *, int *); int MPI_Error_class(int, int *); double MPI_Wtime(void); double MPI_Wtick(void); double PMPI_Wtime(void); double PMPI_Wtick(void); int MPI_Init(int *, char ***); int MPI_Finalize(void); int MPI_Initialized(int *); int MPI_Abort(MPI_Comm, int); int MPI_Pcontrol(const int, ...); int MPIR_Dup_fn ( MPI_Comm, int, void *, void *, void *, int * ); int MPI_Close_port(char *); int MPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int MPI_Comm_disconnect(MPI_Comm *); int MPI_Comm_get_parent(MPI_Comm *); int MPI_Comm_join(int, MPI_Comm *); int MPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int MPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int MPI_Lookup_name(char *, MPI_Info, char *); int MPI_Open_port(MPI_Info, char *); int MPI_Publish_name(char *, MPI_Info, char *); int MPI_Unpublish_name(char *, MPI_Info, char *); int MPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int MPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int MPI_Win_complete(MPI_Win); int MPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int MPI_Win_fence(int, MPI_Win); int MPI_Win_free(MPI_Win *); int MPI_Win_get_group(MPI_Win, MPI_Group *); int MPI_Win_lock(int, int, int, MPI_Win); int MPI_Win_post(MPI_Group, int, MPI_Win); int MPI_Win_start(MPI_Group, int, MPI_Win); int MPI_Win_test(MPI_Win, int *); int MPI_Win_unlock(int, MPI_Win); int MPI_Win_wait(MPI_Win); int MPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int MPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int MPI_Add_error_class(int *); int MPI_Add_error_code(int, int *); int MPI_Add_error_string(int, char *); int MPI_Comm_call_errhandler(MPI_Comm, int); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int MPI_Comm_delete_attr(MPI_Comm, int); int MPI_Comm_free_keyval(int *); int MPI_Comm_get_attr(MPI_Comm, int, void *, int *); int MPI_Comm_get_name(MPI_Comm, char *, int *); int MPI_Comm_set_attr(MPI_Comm, int, void *); int MPI_Comm_set_name(MPI_Comm, char *); int MPI_File_call_errhandler(MPI_File, int); int MPI_Grequest_complete(MPI_Request); int MPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int MPI_Init_thread(int *, char ***, int, int *); int MPI_Is_thread_main(int *); int MPI_Query_thread(int *); int MPI_Status_set_cancelled(MPI_Status *, int); int MPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int MPI_Type_delete_attr(MPI_Datatype, int); int MPI_Type_dup(MPI_Datatype, MPI_Datatype *); int MPI_Type_free_keyval(int *); int MPI_Type_get_attr(MPI_Datatype, int, void *, int *); int MPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int MPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int MPI_Type_get_name(MPI_Datatype, char *, int *); int MPI_Type_set_attr(MPI_Datatype, int, void *); int MPI_Type_set_name(MPI_Datatype, char *); int MPI_Type_match_size( int, int, MPI_Datatype *); int MPI_Win_call_errhandler(MPI_Win, int); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int MPI_Win_delete_attr(MPI_Win, int); int MPI_Win_free_keyval(int *); int MPI_Win_get_attr(MPI_Win, int, void *, int *); int MPI_Win_get_name(MPI_Win, char *, int *); int MPI_Win_set_attr(MPI_Win, int, void *); int MPI_Win_set_name(MPI_Win, char *); # 901 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" int MPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int MPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int MPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int MPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int MPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int MPI_File_set_errhandler(MPI_File, MPI_Errhandler); int MPI_Finalized(int *); int MPI_Free_mem(void *); int MPI_Get_address(void *, MPI_Aint *); int MPI_Info_create(MPI_Info *); int MPI_Info_delete(MPI_Info, char *); int MPI_Info_dup(MPI_Info, MPI_Info *); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info, char *, int, char *, int *); int MPI_Info_get_nkeys(MPI_Info, int *); int MPI_Info_get_nthkey(MPI_Info, int, char *); int MPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int MPI_Info_set(MPI_Info, char *, char *); int MPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int MPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int MPI_Request_get_status(MPI_Request, int *, MPI_Status *); int MPI_Status_c2f(MPI_Status *, MPI_Fint *); int MPI_Status_f2c(MPI_Fint *, MPI_Status *); int MPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int MPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int MPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int MPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int MPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int MPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int MPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int MPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int MPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int MPI_Type_create_f90_integer( int, MPI_Datatype * ); int MPI_Type_create_f90_real( int, int, MPI_Datatype * ); int MPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); int PMPI_Send(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Recv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Get_count(MPI_Status *, MPI_Datatype, int *); int PMPI_Bsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Ssend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Rsend(void*, int, MPI_Datatype, int, int, MPI_Comm); int PMPI_Buffer_attach( void* buffer, int); int PMPI_Buffer_detach( void* buffer, int *); int PMPI_Isend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ibsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Issend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irsend(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Irecv(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Wait(MPI_Request *, MPI_Status *); int PMPI_Test(MPI_Request *, int *, MPI_Status *); int PMPI_Request_free(MPI_Request *); int PMPI_Waitany(int, MPI_Request *, int *, MPI_Status *); int PMPI_Testany(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Waitall(int, MPI_Request *, MPI_Status *); int PMPI_Testall(int, MPI_Request *, int *, MPI_Status *); int PMPI_Waitsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Testsome(int, MPI_Request *, int *, int *, MPI_Status *); int PMPI_Iprobe(int, int, MPI_Comm, int *, MPI_Status *); int PMPI_Probe(int, int, MPI_Comm, MPI_Status *); int PMPI_Cancel(MPI_Request *); int PMPI_Test_cancelled(MPI_Status *, int *); int PMPI_Send_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Bsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Ssend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Rsend_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Recv_init(void*, int, MPI_Datatype, int, int, MPI_Comm, MPI_Request *); int PMPI_Start(MPI_Request *); int PMPI_Startall(int, MPI_Request *); int PMPI_Sendrecv(void *, int, MPI_Datatype, int, int, void *, int, MPI_Datatype, int, int, MPI_Comm, MPI_Status *); int PMPI_Sendrecv_replace(void*, int, MPI_Datatype, int, int, int, int, MPI_Comm, MPI_Status *); int PMPI_Type_contiguous(int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_vector(int, int, int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_indexed(int, int *, int *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_hindexed(int, int *, MPI_Aint *, MPI_Datatype, MPI_Datatype *); int PMPI_Type_struct(int, int *, MPI_Aint *, MPI_Datatype *, MPI_Datatype *); int PMPI_Address(void*, MPI_Aint *); int PMPI_Type_extent(MPI_Datatype, MPI_Aint *); int PMPI_Type_size(MPI_Datatype, int *); int PMPI_Type_lb(MPI_Datatype, MPI_Aint *); int PMPI_Type_ub(MPI_Datatype, MPI_Aint *); int PMPI_Type_commit(MPI_Datatype *); int PMPI_Type_free(MPI_Datatype *); int PMPI_Get_elements(MPI_Status *, MPI_Datatype, int *); int PMPI_Pack(void*, int, MPI_Datatype, void *, int, int *, MPI_Comm); int PMPI_Unpack(void*, int, int *, void *, int, MPI_Datatype, MPI_Comm); int PMPI_Pack_size(int, MPI_Datatype, MPI_Comm, int *); int PMPI_Barrier(MPI_Comm ); int PMPI_Bcast(void* buffer, int, MPI_Datatype, int, MPI_Comm ); int PMPI_Gather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Gatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, int, MPI_Comm); int PMPI_Scatter(void* , int, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Scatterv(void* , int *, int *displs, MPI_Datatype, void*, int, MPI_Datatype, int, MPI_Comm); int PMPI_Allgather(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Allgatherv(void* , int, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Alltoall(void* , int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm); int PMPI_Alltoallv(void* , int *, int *, MPI_Datatype, void*, int *, int *, MPI_Datatype, MPI_Comm); int PMPI_Reduce(void* , void*, int, MPI_Datatype, MPI_Op, int, MPI_Comm); int PMPI_Op_create(MPI_User_function *, int, MPI_Op *); int PMPI_Op_free( MPI_Op *); int PMPI_Allreduce(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Reduce_scatter(void* , void*, int *, MPI_Datatype, MPI_Op, MPI_Comm); int PMPI_Scan(void* , void*, int, MPI_Datatype, MPI_Op, MPI_Comm ); int PMPI_Group_size(MPI_Group, int *); int PMPI_Group_rank(MPI_Group, int *); int PMPI_Group_translate_ranks (MPI_Group, int, int *, MPI_Group, int *); int PMPI_Group_compare(MPI_Group, MPI_Group, int *); int PMPI_Comm_group(MPI_Comm, MPI_Group *); int PMPI_Group_union(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_intersection(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_difference(MPI_Group, MPI_Group, MPI_Group *); int PMPI_Group_incl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_excl(MPI_Group, int, int *, MPI_Group *); int PMPI_Group_range_incl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_range_excl(MPI_Group, int, int [][3], MPI_Group *); int PMPI_Group_free(MPI_Group *); int PMPI_Comm_size(MPI_Comm, int *); int PMPI_Comm_rank(MPI_Comm, int *); int PMPI_Comm_compare(MPI_Comm, MPI_Comm, int *); int PMPI_Comm_dup(MPI_Comm, MPI_Comm *); int PMPI_Comm_create(MPI_Comm, MPI_Group, MPI_Comm *); int PMPI_Comm_split(MPI_Comm, int, int, MPI_Comm *); int PMPI_Comm_free(MPI_Comm *); int PMPI_Comm_test_inter(MPI_Comm, int *); int PMPI_Comm_remote_size(MPI_Comm, int *); int PMPI_Comm_remote_group(MPI_Comm, MPI_Group *); int PMPI_Intercomm_create(MPI_Comm, int, MPI_Comm, int, int, MPI_Comm *); int PMPI_Intercomm_merge(MPI_Comm, int, MPI_Comm *); int PMPI_Keyval_create(MPI_Copy_function *, MPI_Delete_function *, int *, void*); int PMPI_Keyval_free(int *); int PMPI_Attr_put(MPI_Comm, int, void*); int PMPI_Attr_get(MPI_Comm, int, void *, int *); int PMPI_Attr_delete(MPI_Comm, int); int PMPI_Topo_test(MPI_Comm, int *); int PMPI_Cart_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Dims_create(int, int, int *); int PMPI_Graph_create(MPI_Comm, int, int *, int *, int, MPI_Comm *); int PMPI_Graphdims_get(MPI_Comm, int *, int *); int PMPI_Graph_get(MPI_Comm, int, int, int *, int *); int PMPI_Cartdim_get(MPI_Comm, int *); int PMPI_Cart_get(MPI_Comm, int, int *, int *, int *); int PMPI_Cart_rank(MPI_Comm, int *, int *); int PMPI_Cart_coords(MPI_Comm, int, int, int *); int PMPI_Graph_neighbors_count(MPI_Comm, int, int *); int PMPI_Graph_neighbors(MPI_Comm, int, int, int *); int PMPI_Cart_shift(MPI_Comm, int, int, int *, int *); int PMPI_Cart_sub(MPI_Comm, int *, MPI_Comm *); int PMPI_Cart_map(MPI_Comm, int, int *, int *, int *); int PMPI_Graph_map(MPI_Comm, int, int *, int *, int *); int PMPI_Get_processor_name(char *, int *); int PMPI_Get_version(int *, int *); int PMPI_Errhandler_create(MPI_Handler_function *, MPI_Errhandler *); int PMPI_Errhandler_set(MPI_Comm, MPI_Errhandler); int PMPI_Errhandler_get(MPI_Comm, MPI_Errhandler *); int PMPI_Errhandler_free(MPI_Errhandler *); int PMPI_Error_string(int, char *, int *); int PMPI_Error_class(int, int *); int PMPI_Init(int *, char ***); int PMPI_Finalize(void); int PMPI_Initialized(int *); int PMPI_Abort(MPI_Comm, int); int PMPI_Pcontrol(const int, ...); int PMPI_Close_port(char *); int PMPI_Comm_accept(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_connect(char *, MPI_Info, int, MPI_Comm, MPI_Comm *); int PMPI_Comm_disconnect(MPI_Comm *); int PMPI_Comm_get_parent(MPI_Comm *); int PMPI_Comm_join(int, MPI_Comm *); int PMPI_Comm_spawn(char *, char *[], int, MPI_Info, int, MPI_Comm, MPI_Comm *, int []); int PMPI_Comm_spawn_multiple(int, char *[], char **[], int [], MPI_Info [], int, MPI_Comm, MPI_Comm *, int []); int PMPI_Lookup_name(char *, MPI_Info, char *); int PMPI_Open_port(MPI_Info, char *); int PMPI_Publish_name(char *, MPI_Info, char *); int PMPI_Unpublish_name(char *, MPI_Info, char *); int PMPI_Accumulate(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Op, MPI_Win); int PMPI_Get(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Put(void *, int, MPI_Datatype, int, MPI_Aint, int, MPI_Datatype, MPI_Win); int PMPI_Win_complete(MPI_Win); int PMPI_Win_create(void *, MPI_Aint, int, MPI_Info, MPI_Comm, MPI_Win *); int PMPI_Win_fence(int, MPI_Win); int PMPI_Win_free(MPI_Win *); int PMPI_Win_get_group(MPI_Win, MPI_Group *); int PMPI_Win_lock(int, int, int, MPI_Win); int PMPI_Win_post(MPI_Group, int, MPI_Win); int PMPI_Win_start(MPI_Group, int, MPI_Win); int PMPI_Win_test(MPI_Win, int *); int PMPI_Win_unlock(int, MPI_Win); int PMPI_Win_wait(MPI_Win); int PMPI_Alltoallw(void *, int [], int [], MPI_Datatype [], void *, int [], int [], MPI_Datatype [], MPI_Comm); int PMPI_Exscan(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm) ; int PMPI_Add_error_class(int *); int PMPI_Add_error_code(int, int *); int PMPI_Add_error_string(int, char *); int PMPI_Comm_call_errhandler(MPI_Comm, int); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *, MPI_Comm_delete_attr_function *, int *, void *); int PMPI_Comm_delete_attr(MPI_Comm, int); int PMPI_Comm_free_keyval(int *); int PMPI_Comm_get_attr(MPI_Comm, int, void *, int *); int PMPI_Comm_get_name(MPI_Comm, char *, int *); int PMPI_Comm_set_attr(MPI_Comm, int, void *); int PMPI_Comm_set_name(MPI_Comm, char *); int PMPI_File_call_errhandler(MPI_File, int); int PMPI_Grequest_complete(MPI_Request); int PMPI_Grequest_start(MPI_Grequest_query_function *, MPI_Grequest_free_function *, MPI_Grequest_cancel_function *, void *, MPI_Request *); int PMPI_Init_thread(int *, char ***, int, int *); int PMPI_Is_thread_main(int *); int PMPI_Query_thread(int *); int PMPI_Status_set_cancelled(MPI_Status *, int); int PMPI_Status_set_elements(MPI_Status *, MPI_Datatype, int); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *, MPI_Type_delete_attr_function *, int *, void *); int PMPI_Type_delete_attr(MPI_Datatype, int); int PMPI_Type_dup(MPI_Datatype, MPI_Datatype *); int PMPI_Type_free_keyval(int *); int PMPI_Type_get_attr(MPI_Datatype, int, void *, int *); int PMPI_Type_get_contents(MPI_Datatype, int, int, int, int [], MPI_Aint [], MPI_Datatype []); int PMPI_Type_get_envelope(MPI_Datatype, int *, int *, int *, int *); int PMPI_Type_get_name(MPI_Datatype, char *, int *); int PMPI_Type_set_attr(MPI_Datatype, int, void *); int PMPI_Type_set_name(MPI_Datatype, char *); int PMPI_Type_match_size( int, int, MPI_Datatype *); int PMPI_Win_call_errhandler(MPI_Win, int); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *, MPI_Win_delete_attr_function *, int *, void *); int PMPI_Win_delete_attr(MPI_Win, int); int PMPI_Win_free_keyval(int *); int PMPI_Win_get_attr(MPI_Win, int, void *, int *); int PMPI_Win_get_name(MPI_Win, char *, int *); int PMPI_Win_set_attr(MPI_Win, int, void *); int PMPI_Win_set_name(MPI_Win, char *); int PMPI_Type_create_f90_integer( int, MPI_Datatype * ); int PMPI_Type_create_f90_real( int, int, MPI_Datatype * ); int PMPI_Type_create_f90_complex( int, int, MPI_Datatype * ); int PMPI_Alloc_mem(MPI_Aint, MPI_Info info, void *baseptr); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *, MPI_Errhandler *); int PMPI_Comm_get_errhandler(MPI_Comm, MPI_Errhandler *); int PMPI_Comm_set_errhandler(MPI_Comm, MPI_Errhandler); int PMPI_File_create_errhandler(MPI_File_errhandler_function *, MPI_Errhandler *); int PMPI_File_get_errhandler(MPI_File, MPI_Errhandler *); int PMPI_File_set_errhandler(MPI_File, MPI_Errhandler); int PMPI_Finalized(int *); int PMPI_Free_mem(void *); int PMPI_Get_address(void *, MPI_Aint *); int PMPI_Info_create(MPI_Info *); int PMPI_Info_delete(MPI_Info, char *); int PMPI_Info_dup(MPI_Info, MPI_Info *); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info, char *, int, char *, int *); int PMPI_Info_get_nkeys(MPI_Info, int *); int PMPI_Info_get_nthkey(MPI_Info, int, char *); int PMPI_Info_get_valuelen(MPI_Info, char *, int *, int *); int PMPI_Info_set(MPI_Info, char *, char *); int PMPI_Pack_external(char *, void *, int, MPI_Datatype, void *, MPI_Aint, MPI_Aint *); int PMPI_Pack_external_size(char *, int, MPI_Datatype, MPI_Aint *); int PMPI_Request_get_status(MPI_Request, int *, MPI_Status *); int PMPI_Status_c2f(MPI_Status *, MPI_Fint *); int PMPI_Status_f2c(MPI_Fint *, MPI_Status *); int PMPI_Type_create_darray(int, int, int, int [], int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hindexed(int, int [], MPI_Aint [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_hvector(int, int, MPI_Aint, MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_indexed_block(int, int, int [], MPI_Datatype, MPI_Datatype *); int PMPI_Type_create_resized(MPI_Datatype, MPI_Aint, MPI_Aint, MPI_Datatype *); int PMPI_Type_create_struct(int, int [], MPI_Aint [], MPI_Datatype [], MPI_Datatype *); int PMPI_Type_create_subarray(int, int [], int [], int [], int, MPI_Datatype, MPI_Datatype *); int PMPI_Type_get_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Type_get_true_extent(MPI_Datatype, MPI_Aint *, MPI_Aint *); int PMPI_Unpack_external(char *, void *, MPI_Aint, MPI_Aint *, void *, int, MPI_Datatype); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *, MPI_Errhandler *); int PMPI_Win_get_errhandler(MPI_Win, MPI_Errhandler *); int PMPI_Win_set_errhandler(MPI_Win, MPI_Errhandler); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int [], int [], int outdegree, int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int [], int [], int [], int [], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *indegree, int *outdegree, int *weighted); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int [], int [], int maxoutdegree, int [], int []); # 1262 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 1 # 1 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpi.h" 1 # 83 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" 2 # 102 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 109 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 122 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 139 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 149 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 159 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" # 177 "/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include/mpio.h" int MPI_File_open(MPI_Comm, char *, int, MPI_Info, MPI_File *); int MPI_File_close(MPI_File *); int MPI_File_delete(char *, MPI_Info); int MPI_File_set_size(MPI_File, MPI_Offset); int MPI_File_preallocate(MPI_File, MPI_Offset); int MPI_File_get_size(MPI_File, MPI_Offset *); int MPI_File_get_group(MPI_File, MPI_Group *); int MPI_File_get_amode(MPI_File, int *); int MPI_File_set_info(MPI_File, MPI_Info); int MPI_File_get_info(MPI_File, MPI_Info *); int MPI_File_set_view(MPI_File, MPI_Offset, MPI_Datatype, MPI_Datatype, char *, MPI_Info); int MPI_File_get_view(MPI_File, MPI_Offset *, MPI_Datatype *, MPI_Datatype *, char *); int MPI_File_read_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_at_all(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_at(MPI_File, MPI_Offset, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_read_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_all(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_seek(MPI_File, MPI_Offset, int); int MPI_File_get_position(MPI_File, MPI_Offset *); int MPI_File_get_byte_offset(MPI_File, MPI_Offset, MPI_Offset *); int MPI_File_read_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_shared(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_iread_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_iwrite_shared(MPI_File, void *, int, MPI_Datatype, MPI_Request *); int MPI_File_read_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_write_ordered(MPI_File, void *, int, MPI_Datatype, MPI_Status *); int MPI_File_seek_shared(MPI_File, MPI_Offset, int); int MPI_File_get_position_shared(MPI_File, MPI_Offset *); int MPI_File_read_at_all_begin(MPI_File, MPI_Offset, void *, int, MPI_Datatype); int MPI_File_read_at_all_end(MPI_File, void *, MPI_Status *); int MPI_File_write_at_all_begin(MPI_File, MPI_Offset, void *, Found header files ['superlu_ddefs.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.SuperLU_DIST(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.SuperLU_DIST(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SuiteSparse(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.SuiteSparse(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.spai(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.spai(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pARMS(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.pARMS(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hypre(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.hypre(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default Checking for functions [slamch_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char slamch_(); static void _check_slamch_() { slamch_(); } int main() { _check_slamch_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found slamch() in Lapack library as needed by SuperLU Checking for functions [dlamch_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlamch_(); static void _check_dlamch_() { dlamch_(); } int main() { _check_dlamch_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found dlamch() in Lapack library as needed by SuperLU Checking for functions [xerbla_] in library ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char xerbla_(); static void _check_xerbla_() { xerbla_(); } int main() { _check_xerbla_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBIFPORT" to "1" Defined "HAVE_LIBIFCORE" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBM" to "1" Popping language C Found xerbla() in BLAS library as needed by SuperLU Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.SuperLU(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:512) TESTING: configureLibrary from PETSc.packages.SuperLU(config/BuildSystem/config/package.py:512) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional SuperLU Looking for SUPERLU in directory starting with SuperLU Found a copy of SUPERLU in SuperLU_4.3 Pushing language C Popping language C Do not need to rebuild SuperLU Checking for library in Download SUPERLU: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libsuperlu_4.3.a'] Contents: ['conf', 'include', 'lib', 'bin', 'externalpackages', 'share', 'man', 'doc', 'obj'] ================================================================================ TEST check from config.libraries(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [set_default_options] in library ['/chos/global/u2/m/madams/petsc/arch-knc-opt/lib/libsuperlu_4.3.a'] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char set_default_options(); static void _check_set_default_options() { set_default_options(); } int main() { _check_set_default_options();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Defined "HAVE_LIBSUPERLU_4" to "1" Popping language C Checking for headers Download SUPERLU: ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['slu_ddefs.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Checking include with compiler flags var CPPFLAGS ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Executing: mpiicc -E -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include /global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c stdout: # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/confdefs.h" 1 # 2 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conffix.h" 1 # 3 "/global/scratch2/sd/madams/petsc-T9Q01S/config.headers/conftest.c" 2 # 1 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/slu_ddefs.h" 1 typedef int int_t; # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 1 3 # 1 "/usr/include/math.h" 1 3 # 1 "/usr/include/features.h" 1 3 # 121 "/usr/include/features.h" 3 # 144 "/usr/include/features.h" 3 # 176 "/usr/include/features.h" 3 # 185 "/usr/include/features.h" 3 # 217 "/usr/include/features.h" 3 # 241 "/usr/include/features.h" 3 # 273 "/usr/include/features.h" 3 # 325 "/usr/include/features.h" 3 # 357 "/usr/include/features.h" 3 # 1 "/usr/include/sys/cdefs.h" 1 3 # 58 "/usr/include/sys/cdefs.h" 3 # 71 "/usr/include/sys/cdefs.h" 3 # 96 "/usr/include/sys/cdefs.h" 3 # 111 "/usr/include/sys/cdefs.h" 3 # 121 "/usr/include/sys/cdefs.h" 3 # 149 "/usr/include/sys/cdefs.h" 3 # 166 "/usr/include/sys/cdefs.h" 3 # 190 "/usr/include/sys/cdefs.h" 3 # 234 "/usr/include/sys/cdefs.h" 3 # 264 "/usr/include/sys/cdefs.h" 3 # 287 "/usr/include/sys/cdefs.h" 3 # 323 "/usr/include/sys/cdefs.h" 3 # 333 "/usr/include/sys/cdefs.h" 3 # 364 "/usr/include/sys/cdefs.h" 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 366 "/usr/include/sys/cdefs.h" 2 3 # 398 "/usr/include/sys/cdefs.h" 3 # 362 "/usr/include/features.h" 2 3 # 1 "/usr/include/gnu/stubs.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 5 "/usr/include/gnu/stubs.h" 2 3 # 1 "/usr/include/gnu/stubs-64.h" 1 3 # 10 "/usr/include/gnu/stubs.h" 2 3 # 386 "/usr/include/features.h" 2 3 # 29 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_val.h" 1 3 # 35 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_valf.h" 1 3 # 37 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/huge_vall.h" 1 3 # 38 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/inf.h" 1 3 # 41 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/nan.h" 1 3 # 44 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathdef.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 27 "/usr/include/bits/mathdef.h" 2 3 typedef float float_t; typedef double double_t; # 43 "/usr/include/bits/mathdef.h" 3 # 48 "/usr/include/math.h" 2 3 # 66 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern double acos (double __x) __attribute__ ((__nothrow__)); extern double __acos (double __x) __attribute__ ((__nothrow__)); extern double asin (double __x) __attribute__ ((__nothrow__)); extern double __asin (double __x) __attribute__ ((__nothrow__)); extern double atan (double __x) __attribute__ ((__nothrow__)); extern double __atan (double __x) __attribute__ ((__nothrow__)); extern double atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double __atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double cos (double __x) __attribute__ ((__nothrow__)); extern double __cos (double __x) __attribute__ ((__nothrow__)); extern double sin (double __x) __attribute__ ((__nothrow__)); extern double __sin (double __x) __attribute__ ((__nothrow__)); extern double tan (double __x) __attribute__ ((__nothrow__)); extern double __tan (double __x) __attribute__ ((__nothrow__)); extern double cosh (double __x) __attribute__ ((__nothrow__)); extern double __cosh (double __x) __attribute__ ((__nothrow__)); extern double sinh (double __x) __attribute__ ((__nothrow__)); extern double __sinh (double __x) __attribute__ ((__nothrow__)); extern double tanh (double __x) __attribute__ ((__nothrow__)); extern double __tanh (double __x) __attribute__ ((__nothrow__)); extern double acosh (double __x) __attribute__ ((__nothrow__)); extern double __acosh (double __x) __attribute__ ((__nothrow__)); extern double asinh (double __x) __attribute__ ((__nothrow__)); extern double __asinh (double __x) __attribute__ ((__nothrow__)); extern double atanh (double __x) __attribute__ ((__nothrow__)); extern double __atanh (double __x) __attribute__ ((__nothrow__)); extern double exp (double __x) __attribute__ ((__nothrow__)); extern double __exp (double __x) __attribute__ ((__nothrow__)); extern double frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double __frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double __ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double log (double __x) __attribute__ ((__nothrow__)); extern double __log (double __x) __attribute__ ((__nothrow__)); extern double log10 (double __x) __attribute__ ((__nothrow__)); extern double __log10 (double __x) __attribute__ ((__nothrow__)); extern double modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); extern double __modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern double expm1 (double __x) __attribute__ ((__nothrow__)); extern double __expm1 (double __x) __attribute__ ((__nothrow__)); extern double log1p (double __x) __attribute__ ((__nothrow__)); extern double __log1p (double __x) __attribute__ ((__nothrow__)); extern double logb (double __x) __attribute__ ((__nothrow__)); extern double __logb (double __x) __attribute__ ((__nothrow__)); extern double exp2 (double __x) __attribute__ ((__nothrow__)); extern double __exp2 (double __x) __attribute__ ((__nothrow__)); extern double log2 (double __x) __attribute__ ((__nothrow__)); extern double __log2 (double __x) __attribute__ ((__nothrow__)); extern double pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double __pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double sqrt (double __x) __attribute__ ((__nothrow__)); extern double __sqrt (double __x) __attribute__ ((__nothrow__)); extern double hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double __hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double cbrt (double __x) __attribute__ ((__nothrow__)); extern double __cbrt (double __x) __attribute__ ((__nothrow__)); extern double ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern int __isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double __drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double significand (double __x) __attribute__ ((__nothrow__)); extern double __significand (double __x) __attribute__ ((__nothrow__)); extern double copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double j0 (double) __attribute__ ((__nothrow__)); extern double __j0 (double) __attribute__ ((__nothrow__)); extern double j1 (double) __attribute__ ((__nothrow__)); extern double __j1 (double) __attribute__ ((__nothrow__)); extern double jn (int, double) __attribute__ ((__nothrow__)); extern double __jn (int, double) __attribute__ ((__nothrow__)); extern double y0 (double) __attribute__ ((__nothrow__)); extern double __y0 (double) __attribute__ ((__nothrow__)); extern double y1 (double) __attribute__ ((__nothrow__)); extern double __y1 (double) __attribute__ ((__nothrow__)); extern double yn (int, double) __attribute__ ((__nothrow__)); extern double __yn (int, double) __attribute__ ((__nothrow__)); extern double erf (double) __attribute__ ((__nothrow__)); extern double __erf (double) __attribute__ ((__nothrow__)); extern double erfc (double) __attribute__ ((__nothrow__)); extern double __erfc (double) __attribute__ ((__nothrow__)); extern double lgamma (double) __attribute__ ((__nothrow__)); extern double __lgamma (double) __attribute__ ((__nothrow__)); extern double tgamma (double) __attribute__ ((__nothrow__)); extern double __tgamma (double) __attribute__ ((__nothrow__)); extern double gamma (double) __attribute__ ((__nothrow__)); extern double __gamma (double) __attribute__ ((__nothrow__)); extern double lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double __lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double rint (double __x) __attribute__ ((__nothrow__)); extern double __rint (double __x) __attribute__ ((__nothrow__)); extern double nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double __remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern double __scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogb (double __x) __attribute__ ((__nothrow__)); extern int __ilogb (double __x) __attribute__ ((__nothrow__)); extern double scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double __scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double nearbyint (double __x) __attribute__ ((__nothrow__)); extern double __nearbyint (double __x) __attribute__ ((__nothrow__)); extern double round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern double __remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrint (double __x) __attribute__ ((__nothrow__)); extern long int __lrint (double __x) __attribute__ ((__nothrow__)); extern long long int llrint (double __x) __attribute__ ((__nothrow__)); extern long long int __llrint (double __x) __attribute__ ((__nothrow__)); extern long int lround (double __x) __attribute__ ((__nothrow__)); extern long int __lround (double __x) __attribute__ ((__nothrow__)); extern long long int llround (double __x) __attribute__ ((__nothrow__)); extern long long int __llround (double __x) __attribute__ ((__nothrow__)); extern double fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern int __fpclassify (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbit (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double __fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double scalb (double __x, double __n) __attribute__ ((__nothrow__)); extern double __scalb (double __x, double __n) __attribute__ ((__nothrow__)); # 72 "/usr/include/math.h" 2 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern float acosf (float __x) __attribute__ ((__nothrow__)); extern float __acosf (float __x) __attribute__ ((__nothrow__)); extern float asinf (float __x) __attribute__ ((__nothrow__)); extern float __asinf (float __x) __attribute__ ((__nothrow__)); extern float atanf (float __x) __attribute__ ((__nothrow__)); extern float __atanf (float __x) __attribute__ ((__nothrow__)); extern float atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float __atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float cosf (float __x) __attribute__ ((__nothrow__)); extern float __cosf (float __x) __attribute__ ((__nothrow__)); extern float sinf (float __x) __attribute__ ((__nothrow__)); extern float __sinf (float __x) __attribute__ ((__nothrow__)); extern float tanf (float __x) __attribute__ ((__nothrow__)); extern float __tanf (float __x) __attribute__ ((__nothrow__)); extern float coshf (float __x) __attribute__ ((__nothrow__)); extern float __coshf (float __x) __attribute__ ((__nothrow__)); extern float sinhf (float __x) __attribute__ ((__nothrow__)); extern float __sinhf (float __x) __attribute__ ((__nothrow__)); extern float tanhf (float __x) __attribute__ ((__nothrow__)); extern float __tanhf (float __x) __attribute__ ((__nothrow__)); extern float acoshf (float __x) __attribute__ ((__nothrow__)); extern float __acoshf (float __x) __attribute__ ((__nothrow__)); extern float asinhf (float __x) __attribute__ ((__nothrow__)); extern float __asinhf (float __x) __attribute__ ((__nothrow__)); extern float atanhf (float __x) __attribute__ ((__nothrow__)); extern float __atanhf (float __x) __attribute__ ((__nothrow__)); extern float expf (float __x) __attribute__ ((__nothrow__)); extern float __expf (float __x) __attribute__ ((__nothrow__)); extern float frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float __frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float __ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float logf (float __x) __attribute__ ((__nothrow__)); extern float __logf (float __x) __attribute__ ((__nothrow__)); extern float log10f (float __x) __attribute__ ((__nothrow__)); extern float __log10f (float __x) __attribute__ ((__nothrow__)); extern float modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); extern float __modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern float expm1f (float __x) __attribute__ ((__nothrow__)); extern float __expm1f (float __x) __attribute__ ((__nothrow__)); extern float log1pf (float __x) __attribute__ ((__nothrow__)); extern float __log1pf (float __x) __attribute__ ((__nothrow__)); extern float logbf (float __x) __attribute__ ((__nothrow__)); extern float __logbf (float __x) __attribute__ ((__nothrow__)); extern float exp2f (float __x) __attribute__ ((__nothrow__)); extern float __exp2f (float __x) __attribute__ ((__nothrow__)); extern float log2f (float __x) __attribute__ ((__nothrow__)); extern float __log2f (float __x) __attribute__ ((__nothrow__)); extern float powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float sqrtf (float __x) __attribute__ ((__nothrow__)); extern float __sqrtf (float __x) __attribute__ ((__nothrow__)); extern float hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float cbrtf (float __x) __attribute__ ((__nothrow__)); extern float __cbrtf (float __x) __attribute__ ((__nothrow__)); extern float ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float significandf (float __x) __attribute__ ((__nothrow__)); extern float __significandf (float __x) __attribute__ ((__nothrow__)); extern float copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float j0f (float) __attribute__ ((__nothrow__)); extern float __j0f (float) __attribute__ ((__nothrow__)); extern float j1f (float) __attribute__ ((__nothrow__)); extern float __j1f (float) __attribute__ ((__nothrow__)); extern float jnf (int, float) __attribute__ ((__nothrow__)); extern float __jnf (int, float) __attribute__ ((__nothrow__)); extern float y0f (float) __attribute__ ((__nothrow__)); extern float __y0f (float) __attribute__ ((__nothrow__)); extern float y1f (float) __attribute__ ((__nothrow__)); extern float __y1f (float) __attribute__ ((__nothrow__)); extern float ynf (int, float) __attribute__ ((__nothrow__)); extern float __ynf (int, float) __attribute__ ((__nothrow__)); extern float erff (float) __attribute__ ((__nothrow__)); extern float __erff (float) __attribute__ ((__nothrow__)); extern float erfcf (float) __attribute__ ((__nothrow__)); extern float __erfcf (float) __attribute__ ((__nothrow__)); extern float lgammaf (float) __attribute__ ((__nothrow__)); extern float __lgammaf (float) __attribute__ ((__nothrow__)); extern float tgammaf (float) __attribute__ ((__nothrow__)); extern float __tgammaf (float) __attribute__ ((__nothrow__)); extern float gammaf (float) __attribute__ ((__nothrow__)); extern float __gammaf (float) __attribute__ ((__nothrow__)); extern float lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float __lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float rintf (float __x) __attribute__ ((__nothrow__)); extern float __rintf (float __x) __attribute__ ((__nothrow__)); extern float nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern float __scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbf (float __x) __attribute__ ((__nothrow__)); extern int __ilogbf (float __x) __attribute__ ((__nothrow__)); extern float scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float __scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float __nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern float __remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintf (float __x) __attribute__ ((__nothrow__)); extern long int __lrintf (float __x) __attribute__ ((__nothrow__)); extern long long int llrintf (float __x) __attribute__ ((__nothrow__)); extern long long int __llrintf (float __x) __attribute__ ((__nothrow__)); extern long int lroundf (float __x) __attribute__ ((__nothrow__)); extern long int __lroundf (float __x) __attribute__ ((__nothrow__)); extern long long int llroundf (float __x) __attribute__ ((__nothrow__)); extern long long int __llroundf (float __x) __attribute__ ((__nothrow__)); extern float fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __fpclassifyf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float __fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float scalbf (float __x, float __n) __attribute__ ((__nothrow__)); extern float __scalbf (float __x, float __n) __attribute__ ((__nothrow__)); # 95 "/usr/include/math.h" 2 3 # 129 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathcalls.h" 1 3 extern long double acosl (long double __x) __attribute__ ((__nothrow__)); extern long double __acosl (long double __x) __attribute__ ((__nothrow__)); extern long double asinl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinl (long double __x) __attribute__ ((__nothrow__)); extern long double atanl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanl (long double __x) __attribute__ ((__nothrow__)); extern long double atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double __atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double cosl (long double __x) __attribute__ ((__nothrow__)); extern long double __cosl (long double __x) __attribute__ ((__nothrow__)); extern long double sinl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinl (long double __x) __attribute__ ((__nothrow__)); extern long double tanl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanl (long double __x) __attribute__ ((__nothrow__)); extern long double coshl (long double __x) __attribute__ ((__nothrow__)); extern long double __coshl (long double __x) __attribute__ ((__nothrow__)); extern long double sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double __acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double expl (long double __x) __attribute__ ((__nothrow__)); extern long double __expl (long double __x) __attribute__ ((__nothrow__)); extern long double frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double __frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double __ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double logl (long double __x) __attribute__ ((__nothrow__)); extern long double __logl (long double __x) __attribute__ ((__nothrow__)); extern long double log10l (long double __x) __attribute__ ((__nothrow__)); extern long double __log10l (long double __x) __attribute__ ((__nothrow__)); extern long double modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); extern long double __modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); # 125 "/usr/include/bits/mathcalls.h" 3 extern long double expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double __expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double __log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double logbl (long double __x) __attribute__ ((__nothrow__)); extern long double __logbl (long double __x) __attribute__ ((__nothrow__)); extern long double exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double __exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double log2l (long double __x) __attribute__ ((__nothrow__)); extern long double __log2l (long double __x) __attribute__ ((__nothrow__)); extern long double powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double significandl (long double __x) __attribute__ ((__nothrow__)); extern long double __significandl (long double __x) __attribute__ ((__nothrow__)); extern long double copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double j0l (long double) __attribute__ ((__nothrow__)); extern long double __j0l (long double) __attribute__ ((__nothrow__)); extern long double j1l (long double) __attribute__ ((__nothrow__)); extern long double __j1l (long double) __attribute__ ((__nothrow__)); extern long double jnl (int, long double) __attribute__ ((__nothrow__)); extern long double __jnl (int, long double) __attribute__ ((__nothrow__)); extern long double y0l (long double) __attribute__ ((__nothrow__)); extern long double __y0l (long double) __attribute__ ((__nothrow__)); extern long double y1l (long double) __attribute__ ((__nothrow__)); extern long double __y1l (long double) __attribute__ ((__nothrow__)); extern long double ynl (int, long double) __attribute__ ((__nothrow__)); extern long double __ynl (int, long double) __attribute__ ((__nothrow__)); extern long double erfl (long double) __attribute__ ((__nothrow__)); extern long double __erfl (long double) __attribute__ ((__nothrow__)); extern long double erfcl (long double) __attribute__ ((__nothrow__)); extern long double __erfcl (long double) __attribute__ ((__nothrow__)); extern long double lgammal (long double) __attribute__ ((__nothrow__)); extern long double __lgammal (long double) __attribute__ ((__nothrow__)); extern long double tgammal (long double) __attribute__ ((__nothrow__)); extern long double __tgammal (long double) __attribute__ ((__nothrow__)); extern long double gammal (long double) __attribute__ ((__nothrow__)); extern long double __gammal (long double) __attribute__ ((__nothrow__)); extern long double lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double __lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double rintl (long double __x) __attribute__ ((__nothrow__)); extern long double __rintl (long double __x) __attribute__ ((__nothrow__)); extern long double nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern long double __scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbl (long double __x) __attribute__ ((__nothrow__)); extern int __ilogbl (long double __x) __attribute__ ((__nothrow__)); extern long double scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double __scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double __nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long double __remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintl (long double __x) __attribute__ ((__nothrow__)); extern long int __lrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int llrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llrintl (long double __x) __attribute__ ((__nothrow__)); extern long int lroundl (long double __x) __attribute__ ((__nothrow__)); extern long int __lroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int llroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llroundl (long double __x) __attribute__ ((__nothrow__)); extern long double fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __fpclassifyl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double __fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); extern long double __scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); # 142 "/usr/include/math.h" 2 3 extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; # 223 "/usr/include/math.h" 3 # 235 "/usr/include/math.h" 3 # 247 "/usr/include/math.h" 3 # 263 "/usr/include/math.h" 3 # 275 "/usr/include/math.h" 3 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); # 341 "/usr/include/math.h" 3 # 353 "/usr/include/math.h" 3 # 371 "/usr/include/math.h" 3 # 390 "/usr/include/math.h" 3 # 413 "/usr/include/math.h" 3 # 1 "/usr/include/bits/mathinline.h" 1 3 # 1 "/usr/include/bits/wordsize.h" 1 3 # 26 "/usr/include/bits/mathinline.h" 2 3 extern __inline int __attribute__ ((__nothrow__)) __signbitf (float __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x8; } extern __inline int __attribute__ ((__nothrow__)) __signbit (double __x) { int __m; __asm ("pmovmskb %1, %0" : "=r" (__m) : "x" (__x)); return __m & 0x80; } extern __inline int __attribute__ ((__nothrow__)) __signbitl (long double __x) { __extension__ union { long double __l; int __i[3]; } __u = { __l: __x }; return (__u.__i[2] & 0x8000) != 0; } # 417 "/usr/include/math.h" 2 3 # 429 "/usr/include/math.h" 3 # 437 "/usr/include/math.h" 3 # 445 "/usr/include/math.h" 3 # 453 "/usr/include/math.h" 3 # 461 "/usr/include/math.h" 3 # 469 "/usr/include/math.h" 3 # 20 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 2 3 # 38 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 62 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 83 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 99 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 110 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 118 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 129 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 158 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 172 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 197 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 213 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern int fpclassifyf ( float __x ) ; extern int fpclassify ( double __x ) ; extern int fpclassifyd ( double __x ) ; extern int fpclassifyl ( long double __x ) ; extern int __fpclassifyf ( float __x ) ; extern int __fpclassify ( double __x ) ; extern int __fpclassifyd ( double __x ) ; extern int __fpclassifyl ( long double __x ) ; extern int isinff ( float __x ) ; extern int isinf ( double __x ) ; extern int isinfd ( double __x ) ; extern int isinfl ( long double __x ) ; extern int __isinff ( float __x ) ; extern int __isinf ( double __x ) ; extern int __isinfd ( double __x ) ; extern int __isinfl ( long double __x ) ; extern int isnanf ( float __x ) ; extern int isnan ( double __x ) ; extern int isnand ( double __x ) ; extern int isnanl ( long double __x ) ; extern int __isnanf ( float __x ) ; extern int __isnan ( double __x ) ; extern int __isnand ( double __x ) ; extern int __isnanl ( long double __x ) ; extern int isnormalf ( float __x ) ; extern int isnormal ( double __x ) ; extern int isnormald ( double __x ) ; extern int isnormall ( long double __x ) ; extern int __isnormalf ( float __x ) ; extern int __isnormal ( double __x ) ; extern int __isnormald ( double __x ) ; extern int __isnormall ( long double __x ) ; extern int isfinitef ( float __x ) ; extern int isfinite ( double __x ) ; extern int isfinited ( double __x ) ; extern int isfinitel ( long double __x ) ; extern int __isfinitef ( float __x ) ; extern int __isfinite ( double __x ) ; extern int __isfinited ( double __x ) ; extern int __isfinitel ( long double __x ) ; extern int finitef ( float __x ) ; extern int finite ( double __x ) ; extern int finited ( double __x ) ; extern int finitel ( long double __x ) ; extern int __finitef ( float __x ) ; extern int __finite ( double __x ) ; extern int __finited ( double __x ) ; extern int __finitel ( long double __x ) ; extern int signbitf ( float __x ) ; extern int signbit ( double __x ) ; extern int signbitd ( double __x ) ; extern int signbitl ( long double __x ) ; extern int __signbitf ( float __x ) ; extern int __signbit ( double __x ) ; extern int __signbitd ( double __x ) ; extern int __signbitl ( long double __x ) ; # 322 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 343 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 350 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern int isgreaterf( float __xf, float __yf ); extern int isgreater( double __xd, double __yd ); extern int isgreaterl( long double __xl, long double __yl ); extern int __isgreaterf( float __xf, float __yf ); extern int __isgreater( double __xd, double __yd ); extern int __isgreaterl( long double __xl, long double __yl ); extern int isgreaterequalf( float __xf, float __yf ); extern int isgreaterequal( double __xd, double __yd ); extern int isgreaterequall( long double __xl, long double __yl ); extern int __isgreaterequalf( float __xf, float __yf ); extern int __isgreaterequal( double __xd, double __yd ); extern int __isgreaterequall( long double __xl, long double __yl ); extern int islessf( float __xf, float __yf ); extern int isless( double __xd, double __yd ); extern int islessl( long double __xl, long double __yl ); extern int __islessf( float __xf, float __yf ); extern int __isless( double __xd, double __yd ); extern int __islessl( long double __xl, long double __yl ); extern int islessequalf( float __xf, float __yf ); extern int islessequal( double __xd, double __yd ); extern int islessequall( long double __xl, long double __yl ); extern int __islessequalf( float __xf, float __yf ); extern int __islessequal( double __xd, double __yd ); extern int __islessequall( long double __xl, long double __yl ); extern int islessgreaterf( float __xf, float __yf ); extern int islessgreater( double __xd, double __yd ); extern int islessgreaterl( long double __xl, long double __yl ); extern int __islessgreaterf( float __xf, float __yf ); extern int __islessgreater( double __xd, double __yd ); extern int __islessgreaterl( long double __xl, long double __yl ); extern int isunorderedf( float __xf, float __yf ); extern int isunordered( double __xd, double __yd ); extern int isunorderedl( long double __xl, long double __yl ); extern int __isunorderedf( float __xf, float __yf ); extern int __isunordered( double __xd, double __yd ); extern int __isunorderedl( long double __xl, long double __yl ); # 404 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 411 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 427 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 437 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double cot( double __x ); extern float cotf( float __x ); extern long double cotl( long double __x ); extern double cosd( double __x ); extern float cosdf( float __x ); extern long double cosdl( long double __x ); extern double sind( double __x ); extern float sindf( float __x ); extern long double sindl( long double __x ); extern double tand( double __x ); extern float tandf( float __x ); extern long double tandl( long double __x ); extern double cotd( double __x ); extern float cotdf( float __x ); extern long double cotdl( long double __x ); extern double acosd( double __x ); extern float acosdf( float __x ); extern long double acosdl( long double __x ); extern double asind( double __x ); extern float asindf( float __x ); extern long double asindl( long double __x ); extern double atand( double __x ); extern float atandf( float __x ); extern long double atandl( long double __x ); extern double atand2( double __y, double __x ); extern float atand2f( float __y, float __x ); extern long double atand2l( long double __y, long double __x ); extern double atan2d( double __y, double __x ); extern float atan2df( float __y, float __x ); extern long double atan2dl( long double __y, long double __x ); extern void sincosd( double __x, double *__psin, double *__pcos ); extern void sincosdf( float __x, float *__psin, float *__pcos ); extern void sincosdl( long double __x, long double *__psin, long double *__pcos ); # 503 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern void sinhcosh( double __x, double *__psinh, double *__pcosh ); extern void sinhcoshf( float __x, float *__psinh, float *__pcosh ); extern void sinhcoshl( long double __x, long double *__psinh, long double *__pcosh ); # 517 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 544 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 558 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 599 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 622 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 641 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 652 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 661 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double invsqrt( double __x ); extern float invsqrtf( float __x ); extern long double invsqrtl( long double __x ); # 680 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double cdfnorm( double __x ); extern float cdfnormf( float __x ); extern double cdfnorminv( double __x ); extern float cdfnorminvf( float __x ); extern double erfinv( double __x ); extern float erfinvf( float __x ); extern long double erfinvl( long double __x ); extern double erfcinv( double __x ); extern float erfcinvf( float __x ); extern double gamma_r( double __x, int *__signgam ); extern float gammaf_r( float __x, int *__signgam ); extern long double gammal_r( long double __x, int *__signgam ); # 706 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 722 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 740 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 760 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 779 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 794 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 803 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 826 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern double annuity( double __x, double __y ); extern double compound( double __x, double __y ); extern float annuityf( float __x, float __y ); extern long double annuityl( long double __x, long double __y ); extern float compoundf( float __x, float __y ); extern long double compoundl( long double __x, long double __y ); # 846 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 864 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 875 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 916 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 937 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1107 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1121 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef struct ____exception { int type; const char *name; double arg1; double arg2; double retval; } ___exception; # 1142 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef struct ____exceptionf { int type; const char *name; float arg1; float arg2; float retval; } ___exceptionf; typedef struct ____exceptionl { int type; const char *name; long double arg1; long double arg2; long double retval; } ___exceptionl; extern int matherrf( struct ____exceptionf *__e ); extern int matherrl( struct ____exceptionl *__e ); # 1174 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 typedef int ( *___pmatherr )( struct ____exception *__e ); typedef int ( *___pmatherrf )( struct ____exceptionf *__e ); typedef int ( *___pmatherrl )( struct ____exceptionl *__e ); extern ___pmatherr __libm_setusermatherr( ___pmatherr __user_matherr ); extern ___pmatherrf __libm_setusermatherrf( ___pmatherrf __user_matherrf ); extern ___pmatherrl __libm_setusermatherrl( ___pmatherrl __user_matherrl ); # 1212 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 extern _LIB_VERSION_TYPE _LIB_VERSIONIMF; # 1226 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 1439 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/math.h" 3 # 81 "/chos/global/u2/m/madams/petsc/arch-knc-opt/include/slu_ddefs.h" 2 # 1 "/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/include/limits.h" 1 3 # 1 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 1 3 # 120 "/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include/limits.h" 3 # 1 "/usr/include/limits.h" 1 3 # 115 "/usr/include/limits.h" 3 # 142 "/usr/include/limits.h" 3 # 1 "/usr/include/bits/posix1_lim.h" 1 3 Found header files ['slu_ddefs.h'] in ['/chos/global/u2/m/madams/petsc/arch-knc-opt/include', '/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.SuperLU(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:566) TESTING: checkSharedLibrary from PETSc.packages.SuperLU(config/BuildSystem/config/package.py:566) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PaStiX(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.PaStiX(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.scalapack(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.scalapack(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MUMPS(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.MUMPS(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.elemental(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.elemental(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.clique(/chos/global/u2/m/madams/petsc/config/BuildSystem/config/package.py:570) TESTING: alternateConfigureLibrary from PETSc.packages.clique(config/BuildSystem/config/package.py:570) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.utilities.Regression(/chos/global/u2/m/madams/petsc/config/PETSc/utilities/Regression.py:33) TESTING: configureRegression from PETSc.utilities.Regression(config/PETSc/utilities/Regression.py:33) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran METIS PARMETIS SUPERLU_DIST SUPERLU Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:756) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:756) All intermediate test results are stored in /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c(4): error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c (code 2) Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:606) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:606) Sees if there are any prefetch functions supported Executing: uname -s stdout: Linux Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_XMMINTRIN_H" to "1" Defined "Prefetch(a,b,c)" to "_mm_prefetch((const char*)(a),(c))" Defined "PREFETCH_HINT_NTA" to "_MM_HINT_NTA" Defined "PREFETCH_HINT_T0" to "_MM_HINT_T0" Defined "PREFETCH_HINT_T1" to "_MM_HINT_T1" Defined "PREFETCH_HINT_T2" to "_MM_HINT_T2" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:667) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:667) Sees if __attribute((unused)) is supported Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:685) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:685) Check if __attribute((deprecated)) is supported Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated))" Popping language C ================================================================================ TEST configureIsatty from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:679) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:679) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems ================================================================================ TEST configureExpect from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:705) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:705) Sees if the __builtin_expect directive is supported Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:712) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:712) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx Executing: mpiicpc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX Executing: mpiicpc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:734) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:734) Determine what to use for uintptr_t Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:761) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:761) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:774) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:774) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:780) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:780) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetComputerName] in library ['kernel32'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['advapi32'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['User32.lib'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['user32'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c(4): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for type: int32_t Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c(3): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c(3): catastrophic error: cannot open source file "Windows.h" #include ^ compilation aborted for /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c (code 4) Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/global/homes/m/madams/petsc"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:850) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:850) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:866) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:866) ================================================================================ TEST configureScript from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:883) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:883) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:920) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:920) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['-@echo "Now to check if the libraries are working do:"', '-@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} test"', '-@echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:934) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:934) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:939) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:939) Checking for functions [flush_] in library [''] ['-L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic', '-L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic', '-L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic', '-L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0', '-L/usr/linux-k1om-4.7/lib/gcc', '-L/usr/linux-k1om-4.7/linux-k1om/lib64', '-L/usr/linux-k1om-4.7/linux-k1om/usr/lib64', '-Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib', '-Wl,-rpath,/opt/intel/mpi-rt/4.1', '-lifport', '-lifcore', '-lm', '-lm', '-Wl,-rpath,/chos/global/u2/m/madams/petsc/or'] Pushing language C Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); static void _check_flush_() { flush_(); } int main() { _check_flush_();; return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/config.libraries/conftest.o -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libifport.so.5, not found (try using -rpath or -rpath-link) Popping language C Defined "HAVE_FLUSH" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/chos/global/u2/m/madams/petsc/config/PETSc/Configure.py:662) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:662) Checks if atoll exists Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C Executing: mpiicc -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -ldl -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -lmpigf -lmpi -lmpigi -lrt -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -ldl Possible ERROR while running linker: stderr: x86_64-k1om-linux-ld: warning: libintlc.so.5, needed by /global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic/libsvml.so, not found (try using -rpath or -rpath-link) Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to "-mmic -mkl -fp-model precise -O3 " Popping language C Pushing language Cxx Defined make macro "CXX_FLAGS" to "-mmic -mkl -fp-model precise -O3 " Popping language Cxx Defined make macro "CPP_FLAGS" to " " Pushing language C Defined make macro "PCC" to "mpiicc" Defined make macro "PCC_FLAGS" to "-mmic -mkl -fp-model precise -O3 " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpiicc" Defined make macro "PCC_LINKER_FLAGS" to " -mmic -mkl -fp-model precise -O3" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to "-mmic -mkl -fp-model precise -O3 " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC Executing: mpiifort -V Defined make macro "FC_LINKER" to "mpiifort" Defined make macro "FC_LINKER_FLAGS" to " -mmic -mkl -fp-model precise -O3 " Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-module " Pushing language C Defined make macro "SL_LINKER" to "mpiicc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Defined make macro "PETSC_WITH_BATCH" to "1" Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Executing: mpiicc -c -o /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.o -I/global/scratch2/sd/madams/petsc-T9Q01S/config.compilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.setCompilers -I/global/scratch2/sd/madams/petsc-T9Q01S/config.headers -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.cacheDetails -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.featureTestMacros -I/global/scratch2/sd/madams/petsc-T9Q01S/config.functions -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.missing -I/global/scratch2/sd/madams/petsc-T9Q01S/config.atomics -I/global/scratch2/sd/madams/petsc-T9Q01S/config.packages.MPI -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.utilities.scalarTypes -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.packages.pthread -I/global/scratch2/sd/madams/petsc-T9Q01S/config.libraries -I/global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure -I/global/scratch2/sd/madams/petsc-T9Q01S/config.types -mmic -mkl -fp-model precise -O3 /global/scratch2/sd/madams/petsc-T9Q01S/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_SUPERLU" to "1" Defined make macro "SUPERLU_LIB" to "-Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3" Defined make macro "SUPERLU_INCLUDE" to "-I/chos/global/u2/m/madams/petsc/arch-knc-opt/include" Defined "HAVE_SUPERLU_DIST" to "1" Defined make macro "SUPERLU_DIST_LIB" to "-Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_dist_3.3" Defined make macro "SUPERLU_DIST_INCLUDE" to "-I/chos/global/u2/m/madams/petsc/arch-knc-opt/include" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PARMETIS" to "1" Defined make macro "PARMETIS_LIB" to "-Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lparmetis" Defined make macro "PARMETIS_INCLUDE" to "-I/chos/global/u2/m/madams/petsc/arch-knc-opt/include" Defined "HAVE_METIS" to "1" Defined make macro "METIS_LIB" to "-Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis" Defined make macro "METIS_INCLUDE" to "-I/chos/global/u2/m/madams/petsc/arch-knc-opt/include" Defined "HAVE_C2HTML" to "1" Defined make macro "C2HTML_LIB" to "" Defined make macro "C2HTML_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "-lpthread" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_SOWING" to "1" Defined make macro "SOWING_LIB" to "" Defined make macro "SOWING_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/global/homes/m/madams/petsc/arch-knc-opt/lib -lpetsc -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 -lsuperlu_dist_3.3 -lparmetis -lmetis -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -lmpigc4 -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 -lsuperlu_dist_3.3 -lparmetis -lmetis -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -lmpigc4 -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/global/homes/m/madams/petsc/include -I/global/homes/m/madams/petsc/arch-knc-opt/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/global/homes/m/madams/petsc/include -I/global/homes/m/madams/petsc/arch-knc-opt/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include" Defined make macro "DESTDIR" to "/global/homes/m/madams/petsc/arch-knc-opt" Defined "LIB_DIR" to ""/global/homes/m/madams/petsc/arch-knc-opt/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=4 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --known-mpi-int64_t=1 --known-mpi-c-double-complex=1 --download-parmetis --download-metis --download-superlu_dist --download-superlu --with-batch=1 --CFLAGS=\"-mmic -mkl -fp-model precise\" --CXXFLAGS=\"-mmic -mkl -fp-model precise\" --FFLAGS=\"-mmic -mkl -fp-model precise\" --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --known-mpi-shared-libraries=1 --with-shared-libraries=0 --with-x=0 --with-debugging=0 PETSC_ARCH=arch-knc-opt PETSC_DIR=/global/homes/m/madams/petsc" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Executing: ['/usr/common/usg/cmake/3.0.1/bin/cmake', '--version'] stdout: cmake version 3.0.1 CMake suite maintained and supported by Kitware (kitware.com/cmake). Could not parse CMake version: cmake version 3.0.1 CMake suite maintained and supported by Kitware (kitware.com/cmake)., disabling cmake build option CMake configuration was unsuccessful Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpi4py(/chos/global/u2/m/madams/petsc/config/PETSc/packages/mpi4py.py:49) TESTING: alternateConfigureLibrary from PETSc.packages.mpi4py(config/PETSc/packages/mpi4py.py:49) Defined make rule "mpi4py" with dependencies "" and code [] Defined make rule "mpi4py_noinstall" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.petsc4py(/chos/global/u2/m/madams/petsc/config/PETSc/packages/petsc4py.py:65) TESTING: alternateConfigureLibrary from PETSc.packages.petsc4py(config/PETSc/packages/petsc4py.py:65) Defined make rule "petsc4py" with dependencies "" and code [] **** arch-knc-opt/conf/petscvariables **** C_DEPFLAGS = -MMD -MP FC_DEFINE_FLAG = -D FAST_AR_FLAGS = Scq CXX_DEPFLAGS = -MMD -MP AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -module PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -mmic -mkl -fp-model precise -O3 LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpiicc CC_FLAGS = -mmic -mkl -fp-model precise -O3 SUPERLU_LIB = -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 PETSC_WITH_BATCH = 1 SUPERLU_INCLUDE = -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include PETSC_PRECISION = double PETSC_LIB_BASIC = -lpetsc SUPERLU_DIST_LIB = -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_dist_3.3 FC_FLAGS = -mmic -mkl -fp-model precise -O3 BLASLAPACK_LIB = PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC = mpiicc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} SHLIBS = libpetsc MPI_LIB = C2HTML_LIB = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} PARMETIS_LIB = -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lparmetis SUPERLU_DIST_INCLUDE = -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include CC_SUFFIX = o PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CONFIGURE_OPTIONS = --known-level1-dcache-size=32768 --known-level1-dcache-linesize=32 --known-level1-dcache-assoc=0 --known-memcmp-ok=1 --known-sizeof-char=1 --known-sizeof-void-p=8 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=8 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-sizeof-size_t=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=4 --known-sizeof-MPI_Fint=4 --known-mpi-long-double=1 --known-mpi-int64_t=1 --known-mpi-c-double-complex=1 --download-parmetis --download-metis --download-superlu_dist --download-superlu --with-batch=1 --CFLAGS=\"-mmic -mkl -fp-model precise\" --CXXFLAGS=\"-mmic -mkl -fp-model precise\" --FFLAGS=\"-mmic -mkl -fp-model precise\" --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --known-mpi-shared-libraries=1 --with-shared-libraries=0 --with-x=0 --with-debugging=0 PETSC_ARCH=arch-knc-opt PETSC_DIR=/global/homes/m/madams/petsc C2HTML_INCLUDE = METIS_INCLUDE = -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = -lpthread PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/global/homes/m/madams/petsc/include -I/global/homes/m/madams/petsc/arch-knc-opt/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = SOWING_LIB = FC_LINKER = mpiifort PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 -lsuperlu_dist_3.3 -lparmetis -lmetis -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -lmpigc4 -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl CXX_FLAGS = -mmic -mkl -fp-model precise -O3 PCC_LINKER_FLAGS = -mmic -mkl -fp-model precise -O3 PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/global/homes/m/madams/petsc/include -I/global/homes/m/madams/petsc/arch-knc-opt/include -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include PCC_LINKER = mpiicc PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -mmic -mkl -fp-model precise -O3 PTHREAD_INCLUDE = METIS_LIB = -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PARMETIS_INCLUDE = -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /global/homes/m/madams/petsc/arch-knc-opt FC_MODULE_FLAG = -I PETSC_WITH_EXTERNAL_LIB = -L/global/homes/m/madams/petsc/arch-knc-opt/lib -lpetsc -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 -lsuperlu_dist_3.3 -lparmetis -lmetis -lpthread -L/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/mkl/lib/mic -L/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/tbb/lib/mic -L/chos/global/babbage/nsg/opt/intel/composerxe/composer_xe_2015.0.090/compiler/lib/mic -L/usr/linux-k1om-4.7/lib/gcc/x86_64-k1om-linux/4.7.0 -L/usr/linux-k1om-4.7/lib/gcc -L/usr/linux-k1om-4.7/linux-k1om/lib64 -L/usr/linux-k1om-4.7/linux-k1om/usr/lib64 -Wl,-rpath,/global/babbage/nsg/opt/intel/impi/4.1.3.048/mic/lib -Wl,-rpath,/opt/intel/mpi-rt/4.1 -lifport -lifcore -lm -Wl,-rpath,/chos/global/u2/m/madams/petsc/or -lmpigc4 -ldl -lmpigf -lmpi -lmpigi -lrt -lpthread -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc_s -lirc -lirc_s -ldl SOWING_INCLUDE = PETSC_TAO_LIB = ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHELL = /bin/sh GREP = /bin/grep MV = /bin/mv PYTHON = /usr/bin/python MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i SED = /bin/sed DIFF = /usr/bin/diff -w GZIP = /bin/gzip RM = /bin/rm -f CP = /bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpiicc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpiicc CXX = mpiicpc FC = mpiifort CXXCPP = mpiicpc -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpiicc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /global/homes/m/madams/petsc OMAKE = /usr/bin/gmake --no-print-directory MAKE_IS_GNUMAKE = 1 MAKE = /usr/bin/gmake MAKE_NP = 24 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory SVN = svn GIT = git CVS = cvs MPIEXEC = Not_appropriate_for_batch_systems_You_must_use_your_batch_system_to_submit_MPI_jobs_speak_with_your_local_sys_admin TEST_RUNS = C Fortran METIS PARMETIS SUPERLU_DIST SUPERLU Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex CMAKE = /usr/common/usg/cmake/3.0.1/bin/cmake GDB = /usr/bin/gdb DSYMUTIL = true BUILDSHAREDLIB = no C2HTML = /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/c2html BIB2HTML = /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/bib2html MAPNAMES = /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/mapnames BFORT = /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/bfort DOCTEXT = /chos/global/u2/m/madams/petsc/arch-knc-opt/bin/doctext **** arch-knc-opt/conf/petscrules **** shared_install: -@echo "Now to check if the libraries are working do:" -@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} test" -@echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $< shared_arch: petsc4py: mpi4py_noinstall: mpi4py: **** arch-knc-opt/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated)) #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 _MM_HINT_T2 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 _MM_HINT_T0 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 _MM_HINT_T1 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_DIR #define PETSC_DIR "/global/homes/m/madams/petsc" #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/global/homes/m/madams/petsc/arch-knc-opt/lib" #endif #ifndef PETSC_HAVE_SUPERLU_DIST #define PETSC_HAVE_SUPERLU_DIST 1 #endif #ifndef PETSC_HAVE_PARMETIS #define PETSC_HAVE_PARMETIS 1 #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_HAVE_SOWING #define PETSC_HAVE_SOWING 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_HAVE_SUPERLU #define PETSC_HAVE_SUPERLU 1 #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH #define PETSC_HAVE_FLUSH 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_HAVE_C2HTML #define PETSC_HAVE_C2HTML 1 #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_HAVE_METIS #define PETSC_HAVE_METIS 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC_HAVE_XMMINTRIN_H #define PETSC_HAVE_XMMINTRIN_H 1 #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA _MM_HINT_NTA #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) _mm_prefetch((const char*)(a),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_GZIP #define PETSC_HAVE_GZIP 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_HAVE_MATHIMF_H #define PETSC_HAVE_MATHIMF_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBM #define PETSC_HAVE_LIBM 1 #endif #ifndef PETSC_HAVE_LIBSUPERLU_DIST_3 #define PETSC_HAVE_LIBSUPERLU_DIST_3 1 #endif #ifndef PETSC_HAVE_LIBMETIS #define PETSC_HAVE_LIBMETIS 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBPARMETIS #define PETSC_HAVE_LIBPARMETIS 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBIFCORE #define PETSC_HAVE_LIBIFCORE 1 #endif #ifndef PETSC_HAVE_LIBIFPORT #define PETSC_HAVE_LIBIFPORT 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_LIBSUPERLU_4 #define PETSC_HAVE_LIBSUPERLU_4 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "arch-knc-opt" #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 4 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE___INT64 #define PETSC_HAVE___INT64 1 #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_IPXFARGC_ #define PETSC_HAVE_IPXFARGC_ 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() asm volatile("rep; nop" ::: "memory") #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_CONTIGUOUS #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_LONG_DOUBLE #define PETSC_HAVE_MPI_LONG_DOUBLE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_C_DOUBLE_COMPLEX #define PETSC_HAVE_MPI_C_DOUBLE_COMPLEX 1 #endif #ifndef PETSC_HAVE_MPI_INT64_T #define PETSC_HAVE_MPI_INT64_T 1 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_HAVE_ISNORMAL #define PETSC_HAVE_ISNORMAL 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE_SIZE #define PETSC_IS_COLOR_VALUE_TYPE_SIZE PETSC_SIZEOF_SHORT #endif #ifndef PETSC_USE_MALLOC_COALESCED #define PETSC_USE_MALLOC_COALESCED 1 #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_VERSION_DATE_GIT #define PETSC_VERSION_DATE_GIT "2014-07-07 14:50:15 +0200" #endif #ifndef PETSC_VERSION_GIT #define PETSC_VERSION_GIT "v3.5-25-g0ace994" #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_USE_GDB_DEBUGGER #define PETSC_USE_GDB_DEBUGGER 1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC_HAVE_PXFGETARG_NEW #define PETSC_HAVE_PXFGETARG_NEW 1 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_HAVE_GETARG #define PETSC_HAVE_GETARG 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** arch-knc-opt/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: File creation : Generated Fortran stubs Build : Set default architecture to arch-knc-opt in conf/petscvariables File creation : Created arch-knc-opt/conf/reconfigure-arch-knc-opt.py for automatic reconfiguration Framework: File creation : Created makefile configure header arch-knc-opt/conf/petscvariables File creation : Created makefile configure header arch-knc-opt/conf/petscvariables File creation : Created configure header arch-knc-opt/include/petscconf.h File creation : Created C specific configure header arch-knc-opt/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpiicc -mmic -mkl -fp-model precise -O3 C++ Compiler: mpiicpc -mmic -mkl -fp-model precise -O3 Fortran Compiler: mpiifort -mmic -mkl -fp-model precise -O3 Linkers: Static linker: /usr/bin/ar cr make: MPI: Includes: -I/global/babbage/nsg/opt/intel/impi/4.1.3.048/intel64/include BLAS/LAPACK: cmake: parmetis: Includes: -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include Library: -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lparmetis metis: Includes: -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include Library: -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lmetis SuperLU: Includes: -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include Library: -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_4.3 c2html: pthread: Library: -lpthread Arch: SuperLU_DIST: Includes: -I/chos/global/u2/m/madams/petsc/arch-knc-opt/include Library: -Wl,-rpath,/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -L/chos/global/u2/m/madams/petsc/arch-knc-opt/lib -lsuperlu_dist_3.3 sowing: PETSc: PETSC_ARCH: arch-knc-opt PETSC_DIR: /global/homes/m/madams/petsc Clanguage: C Scalar type: real Precision: double Memory alignment: 16 shared libraries: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (gnumake build): make PETSC_DIR=/global/homes/m/madams/petsc PETSC_ARCH=arch-knc-opt all xxx=========================================================================xxx ================================================================================ Finishing Configure Run at Wed Nov 5 10:33:32 2014 ================================================================================