This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by hypre configure 2.9.1a, which was generated by GNU Autoconf 2.63. Invocation command line was $ ./configure --prefix=/global/u2/m/madams/petsc_private/arch-xc30-opt --libdir=/global/u2/m/madams/petsc_private/arch-xc30-opt/lib CC=cc CFLAGS= -fast -no-ipo -g CXX=CC -fast -no-ipo -g F77=ftn -fast -no-ipo -g --with-MPI-lib-dirs= --with-MPI-libs= --with-blas-libs= --with-blas-lib-dir= --with-lapack-libs= --with-lapack-lib-dir= --with-blas=yes --with-lapack=yes --with-fmangle-blas=one-underscore --with-fmangle-lapack=one-underscore --without-babel --without-mli --without-fei --without-superlu ## --------- ## ## Platform. ## ## --------- ## hostname = edison02 uname -m = x86_64 uname -r = 3.0.101-0.29-default uname -s = Linux uname -v = #1 SMP Tue May 13 08:40:57 UTC 2014 (9ec28a0) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/common/usg/darshan/2.3.0/bin PATH: /usr/common/usg/bin PATH: /usr/common/mss/bin PATH: /usr/common/nsg/bin PATH: /usr/common/usg/toolworks/memoryscape.3.6.0-21/bin PATH: /usr/common/usg/toolworks/totalview.8.14.0-21/bin PATH: /usr/common/usg/toolworks/totalview-support/1.2.0.2/bin PATH: /global/common/carver/usg/matlab/R2011b/bin PATH: /usr/common/usg/adios/1.6.0/intel/bin PATH: /opt/cray/netcdf/4.3.2/bin PATH: /usr/common/usg/allineatools/4.2.1-37400/bin PATH: /usr/common/usg/cmake/2.8.11.2/bin PATH: /opt/gcc/4.9.0/bin PATH: /usr/common/usg/valgrind/3.9.0/intel/bin PATH: /global/homes/m/madams/git-fat PATH: /opt/moab/7.2.7/bin PATH: /opt/moab/7.2.7/sbin PATH: /opt/torque/4.2.7/sbin PATH: /opt/torque/4.2.7/bin PATH: /opt/cray/atp/1.7.3/bin PATH: /opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/bin PATH: /opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/sbin PATH: /opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/bin PATH: /opt/cray/csa/3.0.0-1_2.0502.51200.1.108.ari/sbin PATH: /opt/cray/csa/3.0.0-1_2.0502.51200.1.108.ari/bin PATH: /opt/cray/job/1.5.5-0.1_2.0502.52111.3.39.ari/bin PATH: /opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/bin PATH: /opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/bin PATH: /opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/bin PATH: /opt/cray/ugni/5.0-1.0502.9037.7.26.ari/bin PATH: /opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/bin PATH: /opt/intel/composer_xe_2013_sp1.2.144/bin/intel64 PATH: /opt/intel/composer_xe_2013_sp1.2.144/mpirt/bin/intel64 PATH: /opt/cray/craype/2.1.2/bin PATH: /opt/cray/switch/1.0-1.0502.51632.2.84.ari/bin PATH: /opt/cray/eslogin/eswrap/1.1.0-1.020200.1130.0/bin PATH: /usr/syscom/nsg/sbin PATH: /usr/syscom/nsg/bin PATH: /opt/modules/3.2.6.7/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/bin/X11 PATH: /usr/X11R6/bin PATH: /usr/games PATH: /usr/lib/mit/bin PATH: /usr/lib/mit/sbin PATH: /usr/lib/qt3/bin PATH: /opt/cray/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2080: checking build system type configure:2098: result: x86_64-unknown-linux-gnu configure:2124: checking host system type configure:2139: result: x86_64-unknown-linux-gnu configure:3431: checking whether make sets $(MAKE) configure:3453: result: yes configure:3505: checking for ranlib configure:3521: found /usr/bin/ranlib configure:3532: result: ranlib configure:3605: checking for gcc configure:3632: result: cc configure:3864: checking for C compiler version configure:3872: cc --version >&5 icc (ICC) 14.0.2 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. configure:3876: $? = 0 configure:3883: cc -v >&5 icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icc version 14.0.2 (gcc version 4.8.0 compatibility) ld /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtbeginT.o --build-id -static -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -o a.out -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -u MPI_Init -u MPI_Wtime -u __wrap_H5Fcreate -u __wrap_ncmpi_create -wrap write -wrap open -wrap creat -wrap creat64 -wrap open64 -wrap close -wrap read -wrap lseek -wrap lseek64 -wrap pread -wrap pwrite -wrap readv -wrap writev -wrap __xstat -wrap __lxstat -wrap __fxstat -wrap __xstat64 -wrap __lxstat64 -wrap __fxstat64 -wrap mmap -wrap mmap64 -wrap fopen -wrap fclose -wrap fread -wrap fwrite -wrap fseek -wrap fopen64 -wrap pread64 -wrap pwrite64 -wrap fsync -wrap fdatasync -wrap ncmpi_create -wrap ncmpi_open -wrap ncmpi_close -wrap H5Fcreate -wrap H5Fopen -wrap H5Fclose -wrap aio_write -wrap aio_write64 -wrap aio_read -wrap aio_read64 -wrap lio_listio -wrap lio_listio64 -wrap aio_return -wrap aio_return64 -lfmpich -lmpichcxx --start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs --end-group -lz -lnetcdf -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lhdf5_hl -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lhdf5 -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -Ttext-segment=0x20000000 -zmax-page-size=0x20000000 --whole-archive -lhugetlbfs --no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData --undefined=_ATP_Data_Globals --undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lxpmem -ludreg -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lsci_intel -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl --as-needed -limf --no-as-needed --as-needed -lm --no-as-needed --as-needed -lifcore --no-as-needed --as-needed -lifport --no-as-needed --as-needed -lpthread --no-as-needed -limf -lsvml -lirng -lm -lipgo -ldecimal -lgcc -lgcc_eh -lirc -lsvml -lc -lgcc -lgcc_eh -lirc_s -ldl -lc /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtend.o /usr/lib/../lib64/crtn.o /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/libifcore.a(for_main.o): In function `main': for_main.c:(.text+0x54): undefined reference to `MAIN__' configure:3887: $? = 1 configure:3894: cc -V >&5 Intel(R) C Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 14.0.2.144 Build 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. configure:3898: $? = 0 configure:3921: checking for C compiler default output file name configure:3943: cc -fast -no-ipo -g conftest.c >&5 configure:3947: $? = 0 configure:3985: result: a.out configure:4004: checking whether the C compiler works configure:4014: ./a.out libhugetlbfs [edison02:3786]: WARNING: Hugepage size 2097152 unavailableconfigure:4018: $? = 0 configure:4037: result: yes configure:4044: checking whether we are cross compiling configure:4046: result: no configure:4049: checking for suffix of executables configure:4056: cc -o conftest -fast -no-ipo -g conftest.c >&5 configure:4060: $? = 0 configure:4086: result: configure:4092: checking for suffix of object files configure:4118: cc -c -fast -no-ipo -g conftest.c >&5 configure:4122: $? = 0 configure:4147: result: o configure:4151: checking whether we are using the GNU C compiler configure:4180: cc -c -fast -no-ipo -g conftest.c >&5 configure:4187: $? = 0 configure:4204: result: yes configure:4213: checking whether cc accepts -g configure:4243: cc -c -g conftest.c >&5 configure:4250: $? = 0 configure:4351: result: yes configure:4368: checking for cc option to accept ISO C89 configure:4442: cc -c -fast -no-ipo -g conftest.c >&5 configure:4449: $? = 0 configure:4472: result: none needed configure:4606: checking for C++ compiler version configure:4614: CC -fast -no-ipo -g --version >&5 icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc (ICC) 14.0.2 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. configure:4618: $? = 0 configure:4625: CC -fast -no-ipo -g -v >&5 icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc version 14.0.2 (gcc version 4.8.0 compatibility) ld /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtbeginT.o --build-id -static -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -o a.out -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -u MPI_Init -u MPI_Wtime -u __wrap_H5Fcreate -u __wrap_ncmpi_create -wrap write -wrap open -wrap creat -wrap creat64 -wrap open64 -wrap close -wrap read -wrap lseek -wrap lseek64 -wrap pread -wrap pwrite -wrap readv -wrap writev -wrap __xstat -wrap __lxstat -wrap __fxstat -wrap __xstat64 -wrap __lxstat64 -wrap __fxstat64 -wrap mmap -wrap mmap64 -wrap fopen -wrap fclose -wrap fread -wrap fwrite -wrap fseek -wrap fopen64 -wrap pread64 -wrap pwrite64 -wrap fsync -wrap fdatasync -wrap ncmpi_create -wrap ncmpi_open -wrap ncmpi_close -wrap H5Fcreate -wrap H5Fopen -wrap H5Fclose -wrap aio_write -wrap aio_write64 -wrap aio_read -wrap aio_read64 -wrap lio_listio -wrap lio_listio64 -wrap aio_return -wrap aio_return64 -lfmpich -lmpichcxx --start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs --end-group -lz -Ttext-segment=0x20000000 -zmax-page-size=0x20000000 --whole-archive -lhugetlbfs --no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData --undefined=_ATP_Data_Globals --undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lsci_intel -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lnetcdf_c++4 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lnetcdf -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lhdf5_hl -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lhdf5 -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lmpichcxx_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg --as-needed -limf --no-as-needed --as-needed -lm --no-as-needed --as-needed -lifcore --no-as-needed --as-needed -lifport --no-as-needed --as-needed -lpthread --no-as-needed -limf -lsvml -lirng -lm -lipgo -ldecimal -lstdc++ -lgcc -lgcc_eh -lirc -lsvml -lc -lgcc -lgcc_eh -lirc_s -ldl -lc /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtend.o /usr/lib/../lib64/crtn.o /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/libifcore.a(for_main.o): In function `main': for_main.c:(.text+0x54): undefined reference to `MAIN__' configure:4629: $? = 1 configure:4636: CC -fast -no-ipo -g -V >&5 Intel(R) C++ Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 14.0.2.144 Build 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance icpc: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance GNU ld (GNU Binutils; SUSE Linux Enterprise 11) 2.23.1 /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/libifcore.a(for_main.o): In function `main': for_main.c:(.text+0x54): undefined reference to `MAIN__' configure:4640: $? = 1 configure:4643: checking whether we are using the GNU C++ compiler configure:4672: CC -fast -no-ipo -g -c conftest.cpp >&5 configure:4679: $? = 0 configure:4696: result: yes configure:4705: checking whether CC -fast -no-ipo -g accepts -g configure:4735: CC -fast -no-ipo -g -c -g conftest.cpp >&5 configure:4742: $? = 0 configure:4843: result: yes configure:4976: checking for Fortran 77 compiler version configure:4984: ftn -fast -no-ipo -g --version >&5 ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort (IFORT) 14.0.2 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. configure:4988: $? = 0 configure:4995: ftn -fast -no-ipo -g -v >&5 ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort version 14.0.2 ld /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtbeginT.o --build-id -static -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -o a.out /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/for_main.o -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -u MPI_Init -u MPI_Wtime -u __wrap_H5Fcreate -u __wrap_ncmpi_create -wrap write -wrap open -wrap creat -wrap creat64 -wrap open64 -wrap close -wrap read -wrap lseek -wrap lseek64 -wrap pread -wrap pwrite -wrap readv -wrap writev -wrap __xstat -wrap __lxstat -wrap __fxstat -wrap __xstat64 -wrap __lxstat64 -wrap __fxstat64 -wrap mmap -wrap mmap64 -wrap fopen -wrap fclose -wrap fread -wrap fwrite -wrap fseek -wrap fopen64 -wrap pread64 -wrap pwrite64 -wrap fsync -wrap fdatasync -wrap ncmpi_create -wrap ncmpi_open -wrap ncmpi_close -wrap H5Fcreate -wrap H5Fopen -wrap H5Fclose -wrap aio_write -wrap aio_write64 -wrap aio_read -wrap aio_read64 -wrap lio_listio -wrap lio_listio64 -wrap aio_return -wrap aio_return64 -lfmpich -lmpichcxx --start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs --end-group -lz -Ttext-segment=0x20000000 -zmax-page-size=0x20000000 --whole-archive -lhugetlbfs --no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData --undefined=_ATP_Data_Globals --undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lsci_intel -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lnetcdff -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lnetcdf -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lhdf5_hl -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lhdf5 -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lmpichf90_intel -lrt -lugni -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg --as-needed -limf --no-as-needed --as-needed -lm --no-as-needed --as-needed -lpthread --no-as-needed -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lsvml -lc -lgcc -lgcc_eh -lirc_s -ldl -lc /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtend.o /usr/lib/../lib64/crtn.o /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/for_main.o: In function `main': /export/users/nbtester/efi2linux_nightly/branch-14_0/20140121_010000/libdev/frtl/src/libfor/for_main.c:(.text+0x42): undefined reference to `MAIN__' configure:4999: $? = 1 configure:5006: ftn -fast -no-ipo -g -V >&5 Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 14.0.2.144 Build 20140120 Copyright (C) 1985-2014 Intel Corporation. All rights reserved. ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance ifort: warning #10315: specifying -lm before files may supersede the Intel(R) math library and affect performance GNU ld (GNU Binutils; SUSE Linux Enterprise 11) 2.23.1 /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/for_main.o: In function `main': /export/users/nbtester/efi2linux_nightly/branch-14_0/20140121_010000/libdev/frtl/src/libfor/for_main.c:(.text+0x42): undefined reference to `MAIN__' configure:5010: $? = 1 configure:5018: checking whether we are using the GNU Fortran 77 compiler configure:5037: ftn -fast -no-ipo -g -c conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = => choke me ---------------^ conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors. choke me ---------------^ compilation aborted for conftest.F (code 1) configure:5044: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:5061: result: no configure:5067: checking whether ftn -fast -no-ipo -g accepts -g configure:5084: ftn -fast -no-ipo -g -c -g conftest.f >&5 configure:5091: $? = 0 configure:5107: result: yes configure:5141: checking how to get verbose linking output from ftn -fast -no-ipo -g configure:5157: ftn -fast -no-ipo -g -c -g conftest.f >&5 configure:5164: $? = 0 configure:5186: ftn -fast -no-ipo -g -o conftest -g -v conftest.f ifort version 14.0.2 /opt/intel/composer_xe_2013_sp1.2.144/bin/intel64/fortcom -D__INTEL_COMPILER=1400 -D__INTEL_COMPILER_UPDATE=2 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 -D__x86_64__ -D_MT -D__INTEL_COMPILER_BUILD_DATE=20140120 -D__INTEL_OFFLOAD -D__pentium4 -D__pentium4__ -D__tune_pentium4__ -D__SSE2__ -D__SSE3__ -D__SSSE3__ -D__SSE4_1__ -D__SSE4_2__ -D__SSE__ -D__MMX__ -D__AVX__ -mGLOB_pack_sort_init_list -I. -I/opt/cray/netcdf/4.3.2/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/include -I/opt/cray/hdf5/1.8.13/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/sma/include -I/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/include -I/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/include -I/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/include -I/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/include -I/opt/cray/gni-headers/3.0-1.0502.9038.7.4.ari/include -I/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/include -I/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/include -I/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/include -I/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/include -I/usr/local/include -I/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/include -I/opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include -I/opt/cray-hss-devel/7.2.0/include -I/opt/intel/composer_xe_2013_sp1.2.144/compiler/include/intel64 -I/opt/intel/composer_xe_2013_sp1.2.144/compiler/include -I/usr/local/include -I/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include -I/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include-fixed -I/usr/include -D__CRAYXC -D__CRAYXT_COMPUTE_LINUX_TARGET "-fp_modbits no_prec_div" -O3 -g2 -simd -offload_host -mP1OPT_version=14.0-intel64 -mGLOB_diag_file=/scratch1/scratchdirs/madams/ifortEIsxdP.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=480 "-mGLOB_options_string=-I/opt/cray/netcdf/4.3.2/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/include -I/opt/cray/hdf5/1.8.13/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/sma/include -I/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/include -I/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/include -I/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/include -I/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/include -I/opt/cray/gni-headers/3.0-1.0502.9038.7.4.ari/include -I/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/include -I/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/include -I/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/include -I/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/include -I/usr/local/include -I/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/include -I/opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include -I/opt/cray-hss-devel/7.2.0/include -mavx -static -D__CRAYXC -D__CRAYXT_COMPUTE_LINUX_TARGET -fast -no-ipo -g -o conftest -g -v -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -Wl,-u,MPI_Init,-u,MPI_Wtime,-u,__wrap_H5Fcreate,-u,__wrap_ncmpi_create,-wrap,write,-wrap,open,-wrap,creat,-wrap,creat64,-wrap,open64,-wrap,close,-wrap,read,-wrap,lseek,-wrap,lseek64,-wrap,pread,-wrap,pwrite,-wrap,readv,-wrap,writev,-wrap,__xstat,-wrap,__lxstat,-wrap,__fxstat,-wrap,__xstat64,-wrap,__lxstat64,-wrap,__fxstat64,-wrap,mmap,-wrap,mmap64,-wrap,fopen,-wrap,fclose,-wrap,fread,-wrap,fwrite,-wrap,fseek,-wrap,fopen64,-wrap,pread64,-wrap,pwrite64,-wrap,fsync,-wrap,fdatasync,-wrap,ncmpi_create,-wrap,ncmpi_open,-wrap,ncmpi_close,-wrap,H5Fcreate,-wrap,H5Fopen,-wrap,H5Fclose,-wrap,aio_write,-wrap,aio_write64,-wrap,aio_read,-wrap,aio_read64,-wrap,lio_listio,-wrap,lio_listio64,-wrap,aio_return,-wrap,aio_return64 -lfmpich -lmpichcxx -Wl,--start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -Wl,--end-group -lz -Wl,-Ttext-segment=0x20000000,-zmax-page-size=0x20000000 -Wl,--whole-archive,-lhugetlbfs,--no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -Wl,--undefined=_ATP_Data_Globals -Wl,--undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -lm -ldl -lsci_intel -lm -ldl -lnetcdff -lm -lpthread -ldl -lnetcdf -lm -ldl -lhdf5_hl -lz -lrt -ldl -lm -lhdf5 -lz -lrt -ldl -lm -lmpichf90_intel -lrt -lugni -lpmi -lm -lpthread -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg -Wl,--as-needed,-limf,--no-as-needed -Wl,--as-needed,-lm,--no-as-needed -Wl,--as-needed,-lpthread,--no-as-needed" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/opt/intel/composer_xe_2013_sp1.2.144/bin/intel64 -mP3OPT_emit_line_numbers -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL -mDEBUG_use_indirect_strings=TRUE -mIPOPT_ninl_debug_info=TRUE -mDEBUG_emit_dwarf_inline_info=TRUE -mDEBUG_debug_ranges=TRUE -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF20 -mGLOB_as_output_backup_file_name=/scratch1/scratchdirs/madams/ifortM0Bu16as_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_em64t -mGLOB_instruction_tuning=0x0 -mGLOB_product_id_code=0x22006d8f -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x800 -mGLOB_advanced_optim=TRUE -mP3OPT_use_mspp_call_convention -mP2OPT_fdiv_opt=1 -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=1 -mP2OPT_offload_unique_var_string=ifort1307587452mNyKx -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/opt/intel/composer_xe_2013_sp1.2.144/bin/intel64/libiml_attr.so -mIPOPT_obj_output_file_name=/scratch1/scratchdirs/madams/ifortEIsxdP.o -mIPOPT_whole_archive_fixup_file_name=/scratch1/scratchdirs/madams/ifortwarch1f2SwG -mGLOB_linker_version=2.23.1 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/scratch1/scratchdirs/madams/iforttempfilerKbpzP -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/scratch1/scratchdirs/madams/ifortEIsxdP.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f #include "..." search starts here: #include <...> search starts here: . /opt/cray/netcdf/4.3.2/INTEL/140/include /opt/cray/mpt/7.0.0/gni/mpich2-intel/140/include /opt/cray/hdf5/1.8.13/INTEL/140/include /opt/cray/mpt/7.0.0/gni/sma/include /opt/cray/libsci/13.0.0/INTEL/140/sandybridge/include /opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/include /opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/include /opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/include /opt/cray/gni-headers/3.0-1.0502.9038.7.4.ari/include /opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/include /opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/include /opt/cray/ugni/5.0-1.0502.9037.7.26.ari/include /opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/include /usr/local/include /opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/include /opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include /opt/cray-hss-devel/7.2.0/include /opt/intel/composer_xe_2013_sp1.2.144/compiler/include/intel64 /opt/intel/composer_xe_2013_sp1.2.144/compiler/include /usr/local/include /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include-fixed /usr/include End of search list. ld /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtbeginT.o --build-id -static -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -o conftest /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/for_main.o -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib /scratch1/scratchdirs/madams/ifortEIsxdP.o -u MPI_Init -u MPI_Wtime -u __wrap_H5Fcreate -u __wrap_ncmpi_create -wrap write -wrap open -wrap creat -wrap creat64 -wrap open64 -wrap close -wrap read -wrap lseek -wrap lseek64 -wrap pread -wrap pwrite -wrap readv -wrap writev -wrap __xstat -wrap __lxstat -wrap __fxstat -wrap __xstat64 -wrap __lxstat64 -wrap __fxstat64 -wrap mmap -wrap mmap64 -wrap fopen -wrap fclose -wrap fread -wrap fwrite -wrap fseek -wrap fopen64 -wrap pread64 -wrap pwrite64 -wrap fsync -wrap fdatasync -wrap ncmpi_create -wrap ncmpi_open -wrap ncmpi_close -wrap H5Fcreate -wrap H5Fopen -wrap H5Fclose -wrap aio_write -wrap aio_write64 -wrap aio_read -wrap aio_read64 -wrap lio_listio -wrap lio_listio64 -wrap aio_return -wrap aio_return64 -lfmpich -lmpichcxx --start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs --end-group -lz -Ttext-segment=0x20000000 -zmax-page-size=0x20000000 --whole-archive -lhugetlbfs --no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData --undefined=_ATP_Data_Globals --undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lsci_intel -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lnetcdff -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lnetcdf -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lhdf5_hl -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lhdf5 -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lmpichf90_intel -lrt -lugni -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg --as-needed -limf --no-as-needed --as-needed -lm --no-as-needed --as-needed -lpthread --no-as-needed -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lsvml -lc -lgcc -lgcc_eh -lirc_s -ldl -lc /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtend.o /usr/lib/../lib64/crtn.o configure:5255: result: -v configure:5257: checking for Fortran 77 libraries of ftn -fast -no-ipo -g configure:5280: ftn -fast -no-ipo -g -o conftest -g -v conftest.f ifort version 14.0.2 /opt/intel/composer_xe_2013_sp1.2.144/bin/intel64/fortcom -D__INTEL_COMPILER=1400 -D__INTEL_COMPILER_UPDATE=2 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 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-I/opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include -I/opt/cray-hss-devel/7.2.0/include -I/opt/intel/composer_xe_2013_sp1.2.144/compiler/include/intel64 -I/opt/intel/composer_xe_2013_sp1.2.144/compiler/include -I/usr/local/include -I/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include -I/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include-fixed -I/usr/include -D__CRAYXC -D__CRAYXT_COMPUTE_LINUX_TARGET "-fp_modbits no_prec_div" -O3 -g2 -simd -offload_host -mP1OPT_version=14.0-intel64 -mGLOB_diag_file=/scratch1/scratchdirs/madams/ifortl18fAY.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=480 "-mGLOB_options_string=-I/opt/cray/netcdf/4.3.2/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/include -I/opt/cray/hdf5/1.8.13/INTEL/140/include -I/opt/cray/mpt/7.0.0/gni/sma/include -I/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/include -I/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/include -I/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/include -I/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/include -I/opt/cray/gni-headers/3.0-1.0502.9038.7.4.ari/include -I/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/include -I/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/include -I/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/include -I/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/include -I/usr/local/include -I/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/include -I/opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include -I/opt/cray-hss-devel/7.2.0/include -mavx -static -D__CRAYXC -D__CRAYXT_COMPUTE_LINUX_TARGET -fast -no-ipo -g -o conftest -g -v -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -Wl,-u,MPI_Init,-u,MPI_Wtime,-u,__wrap_H5Fcreate,-u,__wrap_ncmpi_create,-wrap,write,-wrap,open,-wrap,creat,-wrap,creat64,-wrap,open64,-wrap,close,-wrap,read,-wrap,lseek,-wrap,lseek64,-wrap,pread,-wrap,pwrite,-wrap,readv,-wrap,writev,-wrap,__xstat,-wrap,__lxstat,-wrap,__fxstat,-wrap,__xstat64,-wrap,__lxstat64,-wrap,__fxstat64,-wrap,mmap,-wrap,mmap64,-wrap,fopen,-wrap,fclose,-wrap,fread,-wrap,fwrite,-wrap,fseek,-wrap,fopen64,-wrap,pread64,-wrap,pwrite64,-wrap,fsync,-wrap,fdatasync,-wrap,ncmpi_create,-wrap,ncmpi_open,-wrap,ncmpi_close,-wrap,H5Fcreate,-wrap,H5Fopen,-wrap,H5Fclose,-wrap,aio_write,-wrap,aio_write64,-wrap,aio_read,-wrap,aio_read64,-wrap,lio_listio,-wrap,lio_listio64,-wrap,aio_return,-wrap,aio_return64 -lfmpich -lmpichcxx -Wl,--start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -Wl,--end-group -lz -Wl,-Ttext-segment=0x20000000,-zmax-page-size=0x20000000 -Wl,--whole-archive,-lhugetlbfs,--no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -Wl,--undefined=_ATP_Data_Globals -Wl,--undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -lm -ldl -lsci_intel -lm -ldl -lnetcdff -lm -lpthread -ldl -lnetcdf -lm -ldl -lhdf5_hl -lz -lrt -ldl -lm -lhdf5 -lz -lrt -ldl -lm -lmpichf90_intel -lrt -lugni -lpmi -lm -lpthread -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg -Wl,--as-needed,-limf,--no-as-needed -Wl,--as-needed,-lm,--no-as-needed -Wl,--as-needed,-lpthread,--no-as-needed" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/opt/intel/composer_xe_2013_sp1.2.144/bin/intel64 -mP3OPT_emit_line_numbers -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL -mDEBUG_use_indirect_strings=TRUE -mIPOPT_ninl_debug_info=TRUE -mDEBUG_emit_dwarf_inline_info=TRUE -mDEBUG_debug_ranges=TRUE -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF20 -mGLOB_as_output_backup_file_name=/scratch1/scratchdirs/madams/ifort5Wh5iwas_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_em64t -mGLOB_instruction_tuning=0x0 -mGLOB_product_id_code=0x22006d8f -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x800 -mGLOB_advanced_optim=TRUE -mP3OPT_use_mspp_call_convention -mP2OPT_fdiv_opt=1 -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=1 -mP2OPT_offload_unique_var_string=ifort1283051824b0mScr -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/opt/intel/composer_xe_2013_sp1.2.144/bin/intel64/libiml_attr.so -mIPOPT_obj_output_file_name=/scratch1/scratchdirs/madams/ifortl18fAY.o -mIPOPT_whole_archive_fixup_file_name=/scratch1/scratchdirs/madams/ifortwarchPNKeN9 -mGLOB_linker_version=2.23.1 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/scratch1/scratchdirs/madams/iforttempfile3W98Mq -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/scratch1/scratchdirs/madams/ifortl18fAY.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f #include "..." search starts here: #include <...> search starts here: . /opt/cray/netcdf/4.3.2/INTEL/140/include /opt/cray/mpt/7.0.0/gni/mpich2-intel/140/include /opt/cray/hdf5/1.8.13/INTEL/140/include /opt/cray/mpt/7.0.0/gni/sma/include /opt/cray/libsci/13.0.0/INTEL/140/sandybridge/include /opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/include /opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/include /opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/include /opt/cray/gni-headers/3.0-1.0502.9038.7.4.ari/include /opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/include /opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/include /opt/cray/ugni/5.0-1.0502.9037.7.26.ari/include /opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/include /usr/local/include /opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/include /opt/cray/krca/1.0.0-2.0502.52773.6.7.ari/include /opt/cray-hss-devel/7.2.0/include /opt/intel/composer_xe_2013_sp1.2.144/compiler/include/intel64 /opt/intel/composer_xe_2013_sp1.2.144/compiler/include /usr/local/include /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/include-fixed /usr/include End of search list. ld /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtbeginT.o --build-id -static -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -o conftest /opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/for_main.o -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib /scratch1/scratchdirs/madams/ifortl18fAY.o -u MPI_Init -u MPI_Wtime -u __wrap_H5Fcreate -u __wrap_ncmpi_create -wrap write -wrap open -wrap creat -wrap creat64 -wrap open64 -wrap close -wrap read -wrap lseek -wrap lseek64 -wrap pread -wrap pwrite -wrap readv -wrap writev -wrap __xstat -wrap __lxstat -wrap __fxstat -wrap __xstat64 -wrap __lxstat64 -wrap __fxstat64 -wrap mmap -wrap mmap64 -wrap fopen -wrap fclose -wrap fread -wrap fwrite -wrap fseek -wrap fopen64 -wrap pread64 -wrap pwrite64 -wrap fsync -wrap fdatasync -wrap ncmpi_create -wrap ncmpi_open -wrap ncmpi_close -wrap H5Fcreate -wrap H5Fopen -wrap H5Fclose -wrap aio_write -wrap aio_write64 -wrap aio_read -wrap aio_read64 -wrap lio_listio -wrap lio_listio64 -wrap aio_return -wrap aio_return64 -lfmpich -lmpichcxx --start-group -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs --end-group -lz -Ttext-segment=0x20000000 -zmax-page-size=0x20000000 --whole-archive -lhugetlbfs --no-whole-archive -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData --undefined=_ATP_Data_Globals --undefined=__atpHandlerInstall -lpthread -lsci_intel_mpi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lsci_intel -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lnetcdff -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lnetcdf -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lhdf5_hl -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lhdf5 -lz -lrt -ldl -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lmpichf90_intel -lrt -lugni -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -lpthread -ldl -lmpich_intel -lrt -lugni -lpthread -lpmi -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -limf -lm -ldl -lmpl -lpmi -lpthread -lalpslli -lpthread -lwlm_detect -lugni -lpthread -lalpsutil -lpthread -lrca -lxpmem -ludreg --as-needed -limf --no-as-needed --as-needed -lm --no-as-needed --as-needed -lpthread --no-as-needed -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lsvml -lc -lgcc -lgcc_eh -lirc_s -ldl -lc /opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/crtend.o /usr/lib/../lib64/crtn.o configure:5457: result: -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s configure:5474: checking for dummy main to link with Fortran 77 libraries configure:5518: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5525: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN MAIN__ | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN MAIN_ | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN __main | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN MAIN | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN _MAIN | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN __MAIN | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN main_ | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN main__ | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5576: cc -o conftest -fast -no-ipo -g conftest.c -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s >&5 /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: multiple definition of `__libhugetlbfs_do_remap_segments' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2013: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__libhugetlbfs_do_remap_segments': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: multiple definition of `__libhugetlbfs_do_remap_segments_end' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2156: first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): multiple definition of `unmapped_strings' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):(.rodata+0x20): first defined here /usr/lib/../lib64/libhugetlbfs.a(elflink.o): In function `__lh_hugetlbfs_setup_elflink': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: multiple definition of `__lh_hugetlbfs_setup_elflink' /usr/lib/../lib64/libhugetlbfs.a(elflink.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/elflink.c:2384: first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall': (.text+0x0): multiple definition of `direct_syscall' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o): In function `direct_syscall_end': (.text+0x1a): multiple definition of `direct_syscall_end' /usr/lib/../lib64/libhugetlbfs.a(sys-elf_x86_64.o):(.text+0x1a): first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__tp_kernel_default_hugepage_size_reset': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: multiple definition of `__tp_kernel_default_hugepage_size_reset' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:79: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_size_to_smaller_unit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: multiple definition of `__lh_size_to_smaller_unit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:93: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hpage_size_to_index': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: multiple definition of `hugetlbfs_find_path_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:536: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_dump_proc_pid_maps': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: multiple definition of `__lh_dump_proc_pid_maps' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1184: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__debug_show_page_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: multiple definition of `__lh__debug_show_page_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:634: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: multiple definition of `gethugepagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:871: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_find_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: multiple definition of `hugetlbfs_find_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1023: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_prefault': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: multiple definition of `__lh_hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1070: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd_for_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: multiple definition of `hugetlbfs_unlinked_fd_for_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1032: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_unlinked_fd': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: multiple definition of `hugetlbfs_unlinked_fd' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1060: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_test_pagesize': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: multiple definition of `__lh_hugetlbfs_test_pagesize' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:994: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `hugetlbfs_test_path': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: multiple definition of `hugetlbfs_test_path' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:978: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_parse_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: multiple definition of `__lh_parse_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:108: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_write_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: multiple definition of `__lh_file_write_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:223: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_setup_mounts': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: multiple definition of `__lh_setup_mounts' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:704: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetblfs_check_map_hugetlb': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: multiple definition of `__lh_hugetblfs_check_map_hugetlb' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:463: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_safe_noreserve': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: multiple definition of `__lh_hugetlbfs_check_safe_noreserve' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:448: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_check_priv_resv': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: multiple definition of `__lh_hugetlbfs_check_priv_resv' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:434: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_file_read_ulong': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: multiple definition of `__lh_file_read_ulong' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:177: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_meminfo': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: multiple definition of `__pu_read_meminfo' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1249: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_default_hugepage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: multiple definition of `__pu_kernel_default_hugepage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:71: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: multiple definition of `__pu_set_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1141: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_overcommit_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: multiple definition of `__pu_set_nr_overcommit_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1156: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_set_nr_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: multiple definition of `__pu_set_nr_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1152: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `gethugepagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: multiple definition of `gethugepagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:886: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `getpagesizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: multiple definition of `getpagesizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:952: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_hugepages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: multiple definition of `__pu_kernel_has_hugepages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:832: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__probe_default_hpage_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: multiple definition of `__lh__probe_default_hpage_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:543: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh__hugetlbfs_setup_kernel_page_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: multiple definition of `__lh__hugetlbfs_setup_kernel_page_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:419: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_get_huge_page_counter': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: multiple definition of `__pu_get_huge_page_counter' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1126: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_get_pool_size': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: multiple definition of `__lh_get_pool_size' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:733: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hpool_sizes': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: multiple definition of `__lh_hpool_sizes' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:791: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_kernel_has_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: multiple definition of `__pu_kernel_has_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:845: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_restore_overcommit_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: multiple definition of `__pu_restore_overcommit_pages' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1170: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__pu_read_nr_overcommit': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: multiple definition of `__pu_read_nr_overcommit' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:1162: first defined here /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o): In function `__lh_hugetlbfs_setup_env': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: multiple definition of `__lh_hugetlbfs_setup_env' /usr/lib/../lib64/libhugetlbfs.a(hugeutils.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/hugeutils.c:305: first defined here /usr/lib/../lib64/libhugetlbfs.a(morecore.o): In function `__lh_hugetlbfs_setup_morecore': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: multiple definition of `__lh_hugetlbfs_setup_morecore' /usr/lib/../lib64/libhugetlbfs.a(morecore.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/morecore.c:273: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh_hugetlbfs_setup_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): multiple definition of `__lh___hugetlbfs_verbose' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x0): first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o): In function `__lh_hugetlbfs_setup_debug': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: multiple definition of `__lh___hugetlbfs_debug' /usr/lib/../lib64/libhugetlbfs.a(debug.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/debug.c:48: first defined here /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): multiple definition of `__lh___hugetlbfs_prefault' /usr/lib/../lib64/libhugetlbfs.a(debug.o):(.data+0x4): first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: multiple definition of `free_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:336: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `free_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: multiple definition of `free_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:245: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `cachecolor': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: multiple definition of `cachecolor' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_huge_pages': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: multiple definition of `get_huge_pages' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:78: first defined here /usr/lib/../lib64/libhugetlbfs.a(alloc.o): In function `get_hugepage_region': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: multiple definition of `get_hugepage_region' /usr/lib/../lib64/libhugetlbfs.a(alloc.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/alloc.c:296: first defined here /usr/lib/../lib64/libhugetlbfs.a(shm.o): In function `shmget': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: multiple definition of `shmget' /usr/lib/../lib64/libhugetlbfs.a(shm.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/shm.c:89: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_test_compare_kver': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: multiple definition of `__pu_test_compare_kver' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:193: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__lh_setup_features': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: multiple definition of `__lh_setup_features' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:255: first defined here /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o): In function `__pu_hugetlbfs_test_feature': /usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: multiple definition of `__pu_hugetlbfs_test_feature' /usr/lib/../lib64/libhugetlbfs.a(kernel-features.o):/usr/src/packages/BUILD/cray-libhugetlbfs-2.16/kernel-features.c:205: first defined here configure:5583: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hypre" | #define PACKAGE_TARNAME "hypre" | #define PACKAGE_VERSION "2.9.1a" | #define PACKAGE_STRING "hypre 2.9.1a" | #define PACKAGE_BUGREPORT "" | #define HYPRE_RELEASE_NAME "hypre" | #define HYPRE_RELEASE_VERSION "2.9.1a" | #define HYPRE_RELEASE_DATE "2013/1/16" | #define HYPRE_RELEASE_TIME "00:00:00" | #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" | #define HYPRE_FMANGLE 0 | #define HYPRE_FMANGLE_BLAS 2 | #define HYPRE_FMANGLE_LAPACK 2 | /* end confdefs.h. */ | #define F77_DUMMY_MAIN _main | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | | ; | return 0; | } configure:5613: result: unknown configure:5632: error: in `/global/u2/m/madams/petsc_private/arch-xc30-opt/externalpackages/hypre-2.9.1a/src': configure:5635: error: linking to Fortran libraries from C fails See `config.log' for more details. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=cc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=' -fast -no-ipo -g ' ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value='CC -fast -no-ipo -g ' ac_cv_env_F77_set=set ac_cv_env_F77_value='ftn -fast -no-ipo -g ' ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=no ac_cv_f77_dummy_main=unknown ac_cv_f77_libs=' -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s' ac_cv_fortran_dummy_main=unknown ac_cv_host=x86_64-unknown-linux-gnu ac_cv_objext=o ac_cv_prog_ac_ct_CC=cc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_make_make_set=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## AR='ar -rcu' BABELDIR='' BLASLIBDIRS='' BLASLIBS='' BUILD_CC_SHARED='' BUILD_CXX_SHARED='' BUILD_F77_SHARED='' BUILD_JAVA='' BUILD_PYTHON='' CC='cc' CFLAGS=' -fast -no-ipo -g ' CPPFLAGS='' CXX='CC -fast -no-ipo -g ' CXXFLAGS='-g -O2' DEFS='' ECHO_C='' ECHO_N='-n' ECHO_T='' EXAMPLEDIR='' EXEEXT='' F77='ftn -fast -no-ipo -g ' F77FLAGS='' FFLAGS='-g' FLIBS=' -L/opt/cray/netcdf/4.3.2/INTEL/140/lib -L/opt/cray/dmapp/default/lib64 -L/opt/cray/mpt/7.0.0/gni/mpich2-intel/140/lib -L/opt/cray/hdf5/1.8.13/INTEL/140/lib -L/opt/cray/mpt/7.0.0/gni/sma/lib64 -L/opt/cray/libsci/13.0.0/INTEL/140/sandybridge/lib -L/usr/common/usg/darshan/2.3.0/lib -L/opt/cray/rca/1.0.0-2.0502.51491.3.92.ari/lib64 -L/opt/cray/alps/5.2.1-2.0502.8712.10.32.ari/lib64 -L/opt/cray/xpmem/0.1-2.0502.51169.1.11.ari/lib64 -L/opt/cray/dmapp/7.0.1-1.0502.9080.9.32.ari/lib64 -L/opt/cray/pmi/5.0.4-1.0000.10161.132.4.ari/lib64 -L/opt/cray/ugni/5.0-1.0502.9037.7.26.ari/lib64 -L/opt/cray/udreg/2.3.2-1.0502.8763.1.11.ari/lib64 -L/opt/cray/atp/1.7.3/lib -L/usr/local/lib -L/opt/cray/wlm_detect/1.0-1.0502.51217.1.1.ari/lib64 -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64 -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64/ -L/opt/gcc/4.9.0/snos/lib/gcc/x86_64-suse-linux/4.9.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lfmpich -lmpichcxx -ldarshan-mpi-io -ldarshan-posix -ldarshan-stubs -lz -lhugetlbfs -lsma -lpmi -ldmapp -lpthread -lAtpSigHandler -lAtpSigHCommData -lsci_intel_mpi -limf -lm -ldl -lsci_intel -lnetcdff -lnetcdf -lhdf5_hl -lrt -lhdf5 -lmpichf90_intel -lugni -lmpich_intel -lmpl -lalpslli -lwlm_detect -lalpsutil -lrca -lxpmem -ludreg -lifport -lifcore -lsvml -lipgo -lirc -lirc_s' HOSTNAME='edison02' HYPRE_ARCH='' HYPRE_BLAS_FILES='' HYPRE_BLAS_SRC_DIR='' HYPRE_BUGS='hypre-support@llnl.gov' HYPRE_DATE='2013/1/16' HYPRE_FEI_BASE_DIR='' HYPRE_FEI_FEMLI_FILES='' HYPRE_FEI_HYPRE_FILES='' HYPRE_FEI_SRC_DIR='' HYPRE_FEI_SUBDIRS='' HYPRE_FEI_SUPERLU_FILES='' HYPRE_INCINSTALL='' HYPRE_INSTALLDIR='' HYPRE_LAPACK_FILES='' HYPRE_LAPACK_SRC_DIR='' HYPRE_LIBINSTALL='' HYPRE_LIBSUFFIX='' HYPRE_NAME='hypre' HYPRE_SRCDIR='/global/u2/m/madams/petsc_private/arch-xc30-opt/externalpackages/hypre-2.9.1a/src' HYPRE_TIME='00:00:00' HYPRE_VERSION='2.9.1a' LAPACKLIBDIRS='' LAPACKLIBS='' LDFLAGS='' LIBOBJS='' LIBS='' LINK_CC='' LINK_CXX='' LINK_F77='' LTLIBOBJS='' MPIFLAGS='' MPIINCLUDE='' MPILIBDIRS='' MPILIBS='' OBJEXT='o' PACKAGE_BUGREPORT='' PACKAGE_NAME='' PACKAGE_STRING='' PACKAGE_TARNAME='' PACKAGE_VERSION='' PATH_SEPARATOR=':' PYTHON='' RANLIB='ranlib' SET_MAKE='' SHARED_BUILD_FLAG='' SHARED_COMPILE_FLAG='' SHARED_OPTIONS='' SHARED_SET_SONAME='' SHELL='/bin/sh' ac_ct_CC='cc' ac_ct_CXX='' ac_ct_F77='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='/global/u2/m/madams/petsc_private/arch-xc30-opt/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/global/u2/m/madams/petsc_private/arch-xc30-opt' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_NAME "hypre" #define PACKAGE_TARNAME "hypre" #define PACKAGE_VERSION "2.9.1a" #define PACKAGE_STRING "hypre 2.9.1a" #define PACKAGE_BUGREPORT "" #define HYPRE_RELEASE_NAME "hypre" #define HYPRE_RELEASE_VERSION "2.9.1a" #define HYPRE_RELEASE_DATE "2013/1/16" #define HYPRE_RELEASE_TIME "00:00:00" #define HYPRE_RELEASE_BUGS "hypre-support@llnl.gov" #define HYPRE_FMANGLE 0 #define HYPRE_FMANGLE_BLAS 2 #define HYPRE_FMANGLE_LAPACK 2 configure: exit 1