Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Mon Jul 8 14:43:11 2013 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --with-cc=icc --CFLAGS=-mmic --with-mpi=0 --with-c2html=0 --download-f-blas-lapack=1 Working directory: /home/VNC/petsc-hg Machine platform: ('Linux', 'localhost.localdomain', '2.6.32-358.2.1.el6.x86_64', '#1 SMP Wed Mar 13 00:26:49 UTC 2013', 'x86_64', 'x86_64') Python version: 2.6.6 (r266:84292, Feb 22 2013, 00:00:18) [GCC 4.4.7 20120313 (Red Hat 4.4.7-3)] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/home/VNC/petsc-hg/config/BuildSystem/config/framework.py:821) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:821) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/home/VNC/petsc-hg/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/gdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/gdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/gdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/gdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/gdb...not found Checking for program /sbin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/sbin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/dbx...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/dbx...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/dbx...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/dbx...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/dbx...not found Checking for program /sbin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/sbin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /root/dbx...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/xdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/xdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/xdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/xdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/xdb...not found Checking for program /sbin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/sbin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /root/xdb...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/dsymutil...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/dsymutil...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/dsymutil...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/dsymutil...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/dsymutil...not found Checking for program /sbin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/sbin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /root/dsymutil...not found Defined make macro "DSYMUTIL" to "true" Defined "USE_GDB_DEBUGGER" to "1" ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/home/VNC/petsc-hg/config/PETSc/utilities/languages.py:28) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:28) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureFortranLanguage from PETSc.utilities.languages(/home/VNC/petsc-hg/config/PETSc/utilities/languages.py:37) TESTING: configureFortranLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:37) Turn on Fortran bindings Using Fortran ================================================================================ TEST configureMake from config.programs(/home/VNC/petsc-hg/config/BuildSystem/config/programs.py:24) TESTING: configureMake from config.programs(config/BuildSystem/config/programs.py:24) Check various things about make Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/make...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/make...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/make...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/make...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/make...not found Checking for program /sbin/make...not found Checking for program /bin/make...not found Checking for program /usr/sbin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/strings...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/strings...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/strings...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/strings...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/strings...not found Checking for program /sbin/strings...not found Checking for program /bin/strings...not found Checking for program /usr/sbin/strings...not found Checking for program /usr/bin/strings...found Defined make macro "STRINGS" to "/usr/bin/strings" sh: /usr/bin/strings /usr/bin/make Executing: /usr/bin/strings /usr/bin/make sh: /lib64/ld-linux-x86-64.so.2 P;He< -He< NHe< @qHe< 5rd" %td" %rd" %jd" %bd" %Zd" %Rd" %Jd" %Bd" %:d" %2d" %*d" %"d" %zc" %rc" %jc" %bc" %Zc" %Rc" %Jc" %Bc" %:c" %2c" %*c" %"c" %zb" %rb" %jb" %bb" %Zb" %Rb" %Jb" %Bb" %:b" %2b" %*b" %"b" %za" %ra" %ja" %ba" %Za" %Ra" %Ja" %Ba" %:a" %2a" =8n" fff. =X[" AVAUATI A<*tUJ" 5v@" l$ H AWAVAUATSH [A\A]A^A_ =TB" []A\A] []A\A] []A\A] ffffff. StZH -{A" -^A" 5d1" =Z?" C(@t+ C(E1 %`5" C(u[H % 5" \$(H l$0L d$8L l$@L t$HL |$PH =|6" =<6" ATSH AVAUATUSH H;-*2" L;t$ []A\A]A^A_ 5|1" |$(H ATUSH 5I0" D$81 5D/" 59." =V-" =B-" D$8dH3 @[]A\ ffff. D$81 T$8dH3 \$@H l$HL d$PH ffff. -U)" H;-}'" 5z2" =5'" l$ L d$(L l$0L t$8L |$@H =v1" 5i&" =X&" l$ L d$(L l$0L t$8L |$@H AWAVAUATI S@H;U@v []A\A]A^A_ fffff. L;%a!" L;%#!" D$XL \$XI <.u) t" ARFILENAMES/ # commands to execute (built-in): (from `%s', line %lu): %.*s *** [%s] Deleting file `%s' *** Deleting file `%s' unlink: kill $(MAKE) ${MAKE} .SUFFIXES *** [%s] Archive member `%s' may be bogus; not deleted *** Archive member `%s' may be bogus; not deleted ARFLAGS CHECKOUT,v COFLAGS $(CC) -E $(FC) F77FLAGS $(FFLAGS) LINT lint YACC yacc MAKEINFO makeinfo TEXI2DVI texi2dvi CWEAVE cweave CTANGLE ctangle rm -f LINK.o COMPILE.c LINK.c COMPILE.cc COMPILE.C $(COMPILE.cc) COMPILE.cpp LINK.cc LINK.C $(LINK.cc) LINK.cpp YACC.y $(YACC) $(YFLAGS) LEX.l $(LEX) $(LFLAGS) -t COMPILE.f LINK.f COMPILE.F LINK.F COMPILE.r LINK.r COMPILE.def COMPILE.mod COMPILE.p LINK.p LINK.s COMPILE.s LINK.S COMPILE.S PREPROCESS.S $(CC) -E $(CPPFLAGS) PREPROCESS.F PREPROCESS.r LINT.c OUTPUT_OPTION -o $@ .LIBPATTERNS lib%.so lib%.a $(AR) $(ARFLAGS) $@ $< %.out @rm -f $@ cp $< $@ %.w %.ch $(CTANGLE) $^ $@ %.tex $(CWEAVE) $^ $@ $(CHECKOUT,v) RCS/%,v RCS/% SCCS/s.% $(COMPILE.mod) -o $@ -e $@ $^ .def.sym $(COMPILE.def) -o $@ $< cat $< >$@ chmod a+x $@ .s.o $(COMPILE.s) -o $@ $< .S.o $(COMPILE.S) -o $@ $< .c.o .cc.o .C.o .cpp.o .f.o .p.o .F.o .r.o .mod.o $(COMPILE.mod) -o $@ $< .c.ln $(LINT.c) -C$* $< .y.ln .l.ln .y.c .l.c @$(RM) $@ $(LEX.l) $< > $@ .F.f .r.f .l.r .S.s $(PREPROCESS.S) $< > $@ .texinfo.info .texi.info .txinfo.info .tex.dvi $(TEX) $< .texinfo.dvi .texi.dvi .txinfo.dvi .w.c $(CTANGLE) $< - $@ .web.p $(TANGLE) $< .w.tex $(CWEAVE) $< - $@ .web.tex $(WEAVE) $< +$(if $(wildcard $@),,$(CO) $(COFLAGS) $< $@) $(CC) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(CFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(RFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(DEFFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(MODFLAGS) $(TARGET_ARCH) $(PC) $(PFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(PC) $(PFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(ASFLAGS) $(LDFLAGS) $(TARGET_MACH) $(AS) $(ASFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(TARGET_MACH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -F $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -F $(LINT) $(LINTFLAGS) $(CPPFLAGS) $(TARGET_ARCH) $(GET) $(GFLAGS) $(SCCS_OUTPUT_OPTION) $< $(LINK.o) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.s) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.S) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.c) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.C) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cpp) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.f) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.p) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.F) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.r) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(COMPILE.c) $(OUTPUT_OPTION) $< $(COMPILE.cc) $(OUTPUT_OPTION) $< $(COMPILE.C) $(OUTPUT_OPTION) $< $(COMPILE.cpp) $(OUTPUT_OPTION) $< $(COMPILE.f) $(OUTPUT_OPTION) $< $(COMPILE.p) $(OUTPUT_OPTION) $< $(COMPILE.F) $(OUTPUT_OPTION) $< $(COMPILE.r) $(OUTPUT_OPTION) $< $(YACC.y) $< $(LINT.c) -C$* y.tab.c $(RM) y.tab.c @$(RM) $*.c $(LEX.l) $< > $*.c $(LINT.c) -i $*.c -o $@ $(RM) $*.c $(YACC.y) $< mv -f y.tab.c $@ $(PREPROCESS.F) $(OUTPUT_OPTION) $< $(PREPROCESS.r) $(OUTPUT_OPTION) $< $(LEX.l) $< > $@ mv -f lex.yy.r $@ $(MAKEINFO) $(MAKEINFO_FLAGS) $< -o $@ $(TEXI2DVI) $(TEXI2DVI_FLAGS) $< # Directories # %s: could not be stat'd. files, impossibilities so far. # %s (device %ld, inode %ld): could not be opened. # %s (device %ld, inode %ld): impossibilities in %lu directories. unterminated variable reference warning: undefined variable `%.*s' Recursive variable `%s' references itself (eventually) # Files # files hash-table stats: %04d-%02d-%02d %02d:%02d:%02d .%09d # Not a target: %s:%s | %s # Command-line target. # Also makes: # File does not exist. # File is very old. # Last modified %s # File has been updated. # File has not been updated. # Successfully updated. file.c question_flag # Failed to be updated. Current time *name != '\0' .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # A default, MAKEFILES, or -include/sinclude makefile. # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: `%s' # File is an intermediate prerequisite. # Modification time never checked. # Commands currently running (THIS IS A BUG). # Dependencies commands running (THIS IS A BUG). # Needs to be updated (-q is set). # Invalid value in `update_status' member! %s: Timestamp out of range; substituting %s *** Deleting intermediate file `%s' Removing intermediate files... Commands were specified for file `%s' at %s:%lu, Commands for file `%s' were found by implicit rule search, but `%s' is now considered the same file as `%s'. Commands for `%s' will be ignored in favor of those for `%s'. can't rename single-colon `%s' to double-colon `%s' can't rename double-colon `%s' to single-colon `%s' print_file enter_file lookup_file undefined recursive simple %s: '%s' default environment environment override command line automatic basename addprefix %s:%lu: filter abspath addsuffix notdir filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard wordlist words origin foreach call warning value eval Internal error: func_error: '%s' insufficient number of arguments (%d) to function `%s' unimplemented on this platform: function `%s' non-numeric first argument to `wordlist' function non-numeric second argument to `wordlist' function invalid first argument to `wordlist' function: `%d' non-numeric first argument to `word' function first argument to `word' function must be greater than 0 Cleaning up temporary batch file %s unterminated call to function `%s': missing `%c' Avoiding implicit rule recursion. Trying pattern rule with stem `%.*s'. Rejecting impossible implicit prerequisite `%s'. Rejecting impossible rule prerequisite `%s'. Trying implicit prerequisite `%s'. Trying rule prerequisite `%s'. Found prerequisite `%s' as VPATH `%s' Looking for a rule with intermediate file `%s'. Looking for an implicit rule for `%s'. Looking for archive-member implicit rule for `%s'. job.c ap <= end $(SHELL) $(IFS) %s: Command not found SHELL %s: Shell program not found execvp: write jobserver /bin/sh vfork cannot enforce load limit: getloadavg (remote) [%s] Error %d (ignored) *** [%s] Error %d (core dumped) *** [%s] %s%s remote_status wait .DELETE_ON_ERROR don't Duplicate the job FD read jobs pipe EOF read jobs pipe Read returned EBADF. break case continue exec exit login logout read readonly shift switch test trap umask while %s (line %d) Bad shell context (!unixy && !batch_mode_shell) INTERNAL: Freeing child 0x%08lx (%s) but no tokens left! Released token for child 0x%08lx (%s). cannot enforce load limits on this operating system Estimated system load = %f (actual = %f) (max requested = %f) Putting child 0x%08lx (%s) PID %ld%s on the chain. f->command_state == cs_finished *** Waiting for unfinished jobs.... Live child 0x%08lx (%s) PID %ld %s Reaping losing child 0x%08lx PID %ld %s Reaping winning child 0x%08lx PID %ld %s Cleaning up temp batch file %s Removing child 0x%08lx PID %ld%s from chain. Need a job token; we %shave children INTERNAL: no children as we go to sleep on read Obtained token for child 0x%08lx (%s). construct_command_argv_internal start_waiting_job ?%s: Entering directory `%s' %s: Leaving directory `%s' %sThis program built for %s write MAKECMDGOALS This program built for %s MFLAGS MAKEFLAGS /usr/share/locale getcwd .VARIABLES .FEATURES archives check-symlink MAKE_RESTARTS MAKE_COMMAND $(MAKE_COMMAND) MAKE -*-command-variables-*- ${-*-command-variables-*-} MAKEOVERRIDES MAKELEVEL CURDIR TMPDIR /tmp fopen (temporary file) fwrite (temporary file) .DEFAULT .DEFAULT_GOAL %d,%d dup jobserver creating jobs pipe init jobserver pipe Updating makefiles.... Makefile `%s' was not found chdir Re-executing[%u]: %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%u main.c unlink (temporary file): No targets Updating goal targets.... always-make basic debug environment-overrides help ignore-errors include-dir jobs jobserver-fds load-average check-symlink-times just-print old-file print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version no-print-directory what-if warn-undefined-variables quiet stop new-file assume-new assume-old max-load dry-run recon Options: %s: Entering an unknown directory %s: Leaving an unknown directory %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory `%s' %s[%u]: Leaving directory `%s' %sGNU Make %s %sCopyright (C) 2006 Free Software Foundation, Inc. %sThis is free software; see the source for copying conditions. %sThere is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A %sPARTICULAR PURPOSE. %sThis program built for %s (%s) # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name the `-%c' option requires a non-empty string argument the `-%c' option requires a positive integral argument Usage: %s [options] [target] ... This program built for %s (%s) Report bugs to target-specific order-only second-expansion else-if unknown debug level specification `%s' Makefile from standard input specified twice. internal error: multiple --jobserver-fds options internal error: invalid --jobserver-fds string `%s' warning: -jN forced in submake: disabling jobserver mode. warning: jobserver unavailable: using -j1. Add `+' to parent make rule. More parallel jobs (-jN) than this platform can handle requested. Resetting to single job (-j1) mode. Makefile `%s' might loop; not remaking it. Failed to remake makefile `%s'. Included makefile `%s' was not found. .DEFAULT_GOAL contains more than one target No targets specified and no makefile found warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from commands. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any commands; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -p, --print-data-base Print make's internal database. -q, --question Run no commands; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo commands. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. main misc.c d == h %s:%lu: *** %s: *** %s[%u]: *** . Stop. virtual memory exhausted h->count != 0 %s: %s[%u]: write error: %s write error %s%s: %s hash_strfree hash_savestring hash_strdup $(HOME) HOME /usr/include .INCLUDE_DIRS define endef ifdef ifndef ifeq ifneq else endif extraneous `%s' .POSIX .SECONDEXPANSION invalid syntax in conditional extraneous `endef' empty variable name empty `override' directive invalid `override' directive unexport vpath -include sinclude missing rule before commands missing separator%s read.c *p2 != '\0' v != 0 missing target pattern multiple target patterns missing `endif' Reading makefile `%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) /usr/gnu/include /usr/local/include GNUmakefile Makefile warning: NUL character seen; rest of line ignored Extraneous text after `endef' directive missing `endef', unterminated `define' Extraneous text after `%s' directive only one `else' per conditional prerequisites cannot be defined in command scripts mixed implicit and static pattern rules mixed implicit and normal rules target `%s' doesn't match the target pattern target file `%s' has both : and :: entries target `%s' given more than once in the same rule. warning: overriding commands for target `%s' warning: ignoring old commands for target `%s' commands commence before first target (did you mean TAB instead of 8 spaces?) Malformed target-specific variable definition target pattern contains no `%%' eval record_target_var lstat: readlink: $(strip $(.LIBPATTERNS)) %s/%s touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: Pruning file `%s'. Still updating file `%s'. Finished updating file `%s'. File `%s' does not exist. No need to remake target `%s' ; using VPATH name `%s' Must remake target `%s'. Ignoring VPATH name `%s'. remake.c Nothing to be done for `%s'. `%s' is up to date. /usr/lib /usr/lib64 .LIBPATTERNS element `%s' is not a pattern Warning: File `%s' has modification time %.2g s in the future %sNo rule to make target `%s'%s %sNo rule to make target `%s', needed by `%s'%s Considering target file `%s'. Recently tried and failed to update file `%s'. File `%s' was considered already. *** Warning: .LOW_RESOLUTION_TIME file `%s' has a high resolution time stamp Found an implicit rule for `%s'. No implicit rule found for `%s'. Using default commands for `%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file `%s'. The prerequisites of `%s' are being made. Giving up on target file `%s'. Target `%s' not remade because of errors. Prerequisite `%s' is order-only for target `%s'. Prerequisite `%s' of target `%s' does not exist. Prerequisite `%s' is newer than target `%s'. Prerequisite `%s' is older than target `%s'. Target `%s' is double-colon and has no prerequisites. No commands for `%s' and no prerequisites actually changed. Making `%s' due to always-make flag. Commands of `%s' are being run. Failed to remake target file `%s'. Successfully remade target file `%s'. Target file `%s' needs remade under -q. file->update_status >= 0 && file->update_status <= 2 update_file_1 # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. (%.o) BUG: num_pattern_rules wrong! %u != %u %s # of strings in strcache: %d %s strcache size: total = %d / max = %d / min = %d / avg = %d %s strcache free: total = %d / max = %d / min = %d / avg = %d %s # of strcache buffers: %d strcache.c best->bytesfree > len add_string environment under -e (from `%s', line %lu) define %s endef %s %s= $(subst ,,%s) # Variables %s : variable.c %s%s%s MAKE_VERSION MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) pop_variable_scope # variable set hash-table stats: # Pattern-specific Variable Values # %u pattern-specific variable values # No pattern-specific variable values. current_variable_set_list->next != ((void *)0) 3.81 x86_64-redhat-linux-gnu # VPATH Search Paths vpath %s %s%c # No `vpath' search paths. # %u `vpath' search paths. $(strip $(VPATH)) $(strip $(GPATH)) # No general (`VPATH' variable) search path. # General (`VPATH' variable) search path: Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% can't allocate %ld bytes for hash table: memory exhausted __gmon_start__ libc.so.6 fflush strcpy __rawmemchr __printf_chk fnmatch readdir _IO_putc setlocale strsignal strncmp optind strrchr wait pipe __strdup dcgettext closedir sigprocmask __stack_chk_fail __lxstat unlink realloc abort stdin _exit getpid kill __assert_fail mkstemp strtod strtol feof getloadavg fgets getpwnam calloc strlen sigemptyset memset glob strstr __errno_location chdir dup2 __fprintf_chk sigaddset ctime putenv stdout fputs lseek memcpy fclose malloc strcat remove __strncpy_chk opendir getenv __ctype_b_loc sscanf optarg stderr alarm getlogin readlink setrlimit getopt_long execvp __fxstat __realpath_chk getcwd fwrite fread gettimeofday sigaction waitpid localtime strchr vfork __vfprintf_chk fdopen qsort __strcpy_chk __ctype_tolower_loc setvbuf fcntl __sprintf_chk bsd_signal __xstat getrlimit memmove bindtextdomain opterr strcmp strerror __libc_start_main ferror globfree __environ __cxa_atexit GLIBC_2.4 GLIBC_2.3 GLIBC_2.3.4 GLIBC_2.2.5 /lib64/ld-linux-x86-64.so.2 ?Ce< \Ce< 0He< 'Ce< _Ce< oFe< phKe< hFe< 9Fe< +Ce< P+Ce< 0+Ce< tFe< pCe< `SCe< 'Ce< 9He< PvFe< @RCe< 0RCe< 4Ce< $Pe< fFe< DFe< 03Ce< {Fe< kFe< .out .a .ln .o .c .cc .C .cpp .p .f .F .r .y .l .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el /bin/sh -c #;"*?[]&|<>(){}$`^~! Defined make macro "OMAKE " to "/usr/bin/make --no-print-directory" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} module multiprocessing found 32 cores: using make_np = 10 Defined make macro "MAKE_NP" to "10" ================================================================================ TEST configureMkdir from config.programs(/home/VNC/petsc-hg/config/BuildSystem/config/programs.py:111) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:111) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/mkdir...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/mkdir...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/mkdir...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/mkdir...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/mkdir...not found Checking for program /sbin/mkdir...not found Checking for program /bin/mkdir...found sh: /bin/mkdir -p .conftest/tmp Executing: /bin/mkdir -p .conftest/tmp sh: Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configurePrograms from config.programs(/home/VNC/petsc-hg/config/BuildSystem/config/programs.py:133) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:133) Check for the programs needed to build and run PETSc Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/sh...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/sh...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/sh...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/sh...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/sh...not found Checking for program /sbin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/sed...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/sed...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/sed...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/sed...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/sed...not found Checking for program /sbin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" All intermediate test results are stored in /tmp/petsc-DMYjax All intermediate test results are stored in /tmp/petsc-DMYjax/config.programs sh: /bin/sed -i s/sed/sd/g "/tmp/petsc-DMYjax/config.programs/sed1" Executing: /bin/sed -i s/sed/sd/g "/tmp/petsc-DMYjax/config.programs/sed1" sh: Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/mv...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/mv...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/mv...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/mv...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/mv...not found Checking for program /sbin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/cp...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/cp...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/cp...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/cp...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/cp...not found Checking for program /sbin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/grep...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/grep...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/grep...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/grep...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/grep...not found Checking for program /sbin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/rm...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/rm...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/rm...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/rm...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/rm...not found Checking for program /sbin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/diff...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/diff...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/diff...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/diff...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/diff...not found Checking for program /sbin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/sbin/diff...not found Checking for program /usr/bin/diff...found sh: "/usr/bin/diff" -w "/tmp/petsc-DMYjax/config.programs/diff1" "/tmp/petsc-DMYjax/config.programs/diff2" Executing: "/usr/bin/diff" -w "/tmp/petsc-DMYjax/config.programs/diff1" "/tmp/petsc-DMYjax/config.programs/diff2" sh: Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /root/ps...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/gzip...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/gzip...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/gzip...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/gzip...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/gzip...not found Checking for program /sbin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureGit from config.sourceControl(/home/VNC/petsc-hg/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/git...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/git...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/git...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/git...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/git...not found Checking for program /sbin/git...not found Checking for program /bin/git...not found Checking for program /usr/sbin/git...not found Checking for program /usr/bin/git...not found Checking for program /root/git...not found ================================================================================ TEST configureMercurial from config.sourceControl(/home/VNC/petsc-hg/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/hg...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/hg...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/hg...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/hg...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/hg...not found Checking for program /sbin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /root/hg...not found ================================================================================ TEST configureCVS from config.sourceControl(/home/VNC/petsc-hg/config/BuildSystem/config/sourceControl.py:46) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:46) Find the CVS executable Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/cvs...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/cvs...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/cvs...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/cvs...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/cvs...not found Checking for program /sbin/cvs...not found Checking for program /bin/cvs...not found Checking for program /usr/sbin/cvs...not found Checking for program /usr/bin/cvs...found Defined make macro "CVS" to "cvs" sh: cvs --version Executing: cvs --version sh: Concurrent Versions System (CVS) 1.11.23 (client/server) Copyright (C) 2006 Free Software Foundation, Inc. Senior active maintainers include Larry Jones, Derek R. Price, and Mark D. Baushke. Please see the AUTHORS and README files from the CVS distribution kit for a complete list of contributors and copyrights. CVS may be copied only under the terms of the GNU General Public License, a copy of which can be found with the CVS distribution kit. Specify the --help option for further information about CVS ================================================================================ TEST configureSubversion from config.sourceControl(/home/VNC/petsc-hg/config/BuildSystem/config/sourceControl.py:55) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:55) Find the Subversion executable Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/svn...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/svn...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/svn...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/svn...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/svn...not found Checking for program /sbin/svn...not found Checking for program /bin/svn...not found Checking for program /usr/sbin/svn...not found Checking for program /usr/bin/svn...found Defined make macro "SVN" to "svn" sh: svn --version -q Executing: svn --version -q sh: 1.6.11 ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/home/VNC/petsc-hg/config/PETSc/utilities/petscdir.py:28) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:28) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 0 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 4 #define PETSC_VERSION_SUBMINOR 0 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/home/VNC/petsc-hg" Defined "DIR" to ""/home/VNC/petsc-hg"" ================================================================================ TEST configureExternalPackagesDir from PETSc.utilities.petscdir(/home/VNC/petsc-hg/config/PETSc/utilities/petscdir.py:77) TESTING: configureExternalPackagesDir from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:77) ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscdir(/home/VNC/petsc-hg/config/PETSc/utilities/petscdir.py:84) TESTING: configureInstallationMethod from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:84) bin/maint exists. This appears to be a repository clone =============================================================================== *****WARNING: PETSC_DIR appears to be a mercurial clone - but hg is not found in PATH******** =============================================================================== ================================================================================ TEST configureETags from PETSc.utilities.Etags(/home/VNC/petsc-hg/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise WARNING: ETags files have not been created Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/etags...not found Checking for program /opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64/etags...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/etags...not found Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64_mic/etags...not found Checking for program /opt/intel/composer_xe_2013.5.192/debugger/gui/intel64/etags...not found Checking for program /sbin/etags...not found Checking for program /bin/etags...not found Checking for program /usr/sbin/etags...not found Checking for program /usr/bin/etags...not found Checking for program /root/etags...not found Checking for program /home/VNC/petsc-hg/bin/win32fe/etags...not found The etags command is not in your path, cannot build etags files ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/home/VNC/petsc-hg/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be Defined make macro "DATAFILESPATH" to "None" ================================================================================ TEST printEnvVariables from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:1504) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1504) **** printenv **** SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass LOADEDMODULES= INTEL_LICENSE_FILE=/opt/intel/composer_xe_2013.5.192/licenses:/opt/intel/licenses:/root/intel/licenses module=() { eval `/usr/bin/modulecmd bash $*` } LESSOPEN=|/usr/bin/lesspipe.sh %s IPPROOT=/opt/intel/composer_xe_2013.5.192/ipp CPATH=/opt/intel/composer_xe_2013.5.192/mkl/include:/opt/intel/composer_xe_2013.5.192/tbb/include LOGNAME=root USER=root QTDIR=/usr/lib64/qt-3.3 PATH=/opt/intel/composer_xe_2013.5.192/bin/intel64:/opt/intel/composer_xe_2013.5.192/mpirt/bin/intel64:/opt/intel/composer_xe_2013.5.192/bin/intel64:/opt/intel/composer_xe_2013.5.192/bin/intel64_mic:/opt/intel/composer_xe_2013.5.192/debugger/gui/intel64:/sbin:/bin:/usr/sbin:/usr/bin LD_LIBRARY_PATH=/opt/intel/composer_xe_2013.5.192/compiler/lib/intel64:/opt/intel/mic/coi/host-linux-release/lib:/opt/intel/mic/myo/lib:/opt/intel/composer_xe_2013.5.192/mpirt/lib/intel64:/opt/intel/composer_xe_2013.5.192/ipp/../compiler/lib/intel64:/opt/intel/composer_xe_2013.5.192/ipp/lib/intel64:/opt/intel/mic/coi/host-linux-release/lib:/opt/intel/mic/myo/lib:/opt/intel/composer_xe_2013.5.192/compiler/lib/intel64:/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64:/opt/intel/composer_xe_2013.5.192/tbb/lib/intel64/gcc4.4 LANG=en_US.UTF-8 TERM=xterm SHELL=/bin/bash MIC_LD_LIBRARY_PATH=/opt/intel/composer_xe_2013.5.192/compiler/lib/mic:/opt/intel/mic/coi/device-linux-release/lib:/opt/intel/mic/myo/lib:/opt/intel/mic/coi/device-linux-release/lib:/opt/intel/mic/myo/lib:/opt/intel/composer_xe_2013.5.192/compiler/lib/mic:/opt/intel/composer_xe_2013.5.192/mkl/lib/mic:/opt/intel/composer_xe_2013.5.192/tbb/lib/mic LIBRARY_PATH=/opt/intel/composer_xe_2013.5.192/compiler/lib/intel64:/opt/intel/composer_xe_2013.5.192/ipp/../compiler/lib/intel64:/opt/intel/composer_xe_2013.5.192/ipp/lib/intel64:/opt/intel/composer_xe_2013.5.192/compiler/lib/intel64:/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64:/opt/intel/composer_xe_2013.5.192/tbb/lib/intel64/gcc4.4 INCLUDE=/opt/intel/composer_xe_2013.5.192/mkl/include SHLVL=1 IDB_HOME=/opt/intel/composer_xe_2013.5.192/bin/intel64 G_BROKEN_FILENAMES=1 HISTSIZE=1000 MANPATH=/opt/intel/composer_xe_2013.5.192/man/en_US:/opt/intel/composer_xe_2013.5.192/man/en_US:/usr/share/man/overrides:/usr/share/man/en:/usr/share/man:/usr/local/man:/usr/local/share/man:/opt/intel/mic/share/man: SUDO_USER=VNC HOME=/root MODULESHOME=/usr/share/Modules USERNAME=root SUDO_UID=502 TBBROOT=/opt/intel/composer_xe_2013.5.192/tbb NLSPATH=/opt/intel/composer_xe_2013.5.192/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/composer_xe_2013.5.192/ipp/lib/intel64/locale/%l_%t/%N:/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64/locale/%l_%t/%N:/opt/intel/composer_xe_2013.5.192/debugger/intel64/locale/%l_%t/%N _=./configure MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles SUDO_COMMAND=/bin/su SUDO_GID=502 DISPLAY=:2.0 MKLROOT=/opt/intel/composer_xe_2013.5.192/mkl OLDPWD=/home/VNC HOSTNAME=localhost.localdomain PWD=/home/VNC/petsc-hg CVS_RSH=ssh COLORTERM=gnome-terminal MAIL=/var/spool/mail/VNC 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================================================================================ TEST resetEnvCompilers from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:1511) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1511) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:1476) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1476) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:1495) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1495) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:399) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:399) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:409) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:409) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -mmic Initialized CFLAGS to -mmic Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py:525) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525) Locate a functional C compiler Checking for program /opt/intel/composer_xe_2013.5.192/bin/intel64/icc...found Defined make macro "CC" to "icc" Pushing language C All intermediate test results are stored in /tmp/petsc-DMYjax/config.setCompilers sh: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c Executing: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c Executing: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: icc -o /tmp/petsc-DMYjax/config.setCompilers/conftest -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.o Executing: icc -o /tmp/petsc-DMYjax/config.setCompilers/conftest -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.o sh: sh: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c Executing: icc -c -o /tmp/petsc-DMYjax/config.setCompilers/conftest.o -I/tmp/petsc-DMYjax/config.setCompilers -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: icc -o /tmp/petsc-DMYjax/config.setCompilers/conftest -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.o Executing: icc -o /tmp/petsc-DMYjax/config.setCompilers/conftest -mmic /tmp/petsc-DMYjax/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-DMYjax/config.setCompilers/conftest sh: /tmp/petsc-DMYjax/config.setCompilers/conftest Executing: /tmp/petsc-DMYjax/config.setCompilers/conftest sh: ERROR while running executable: Could not execute "/tmp/petsc-DMYjax/config.setCompilers/conftest": /bin/sh: /tmp/petsc-DMYjax/config.setCompilers/conftest: cannot execute binary file sh: icc --help Executing: icc --help sh: Intel(R) C++ Compiler Help ========================== Intel(R) Compiler includes compiler options that optimize for instruction sets that are available in both Intel(R) and non-Intel microprocessors, but may perform additional optimizations for Intel microprocessors than for non-Intel microprocessors. In addition, certain compiler options for Intel(R) Compiler are reserved for Intel microprocessors. For a detailed description of these compiler options, including the instructions they implicate, please refer to "Intel(R) Compiler User and Reference Guides > Compiler Options." usage: icc [options] file1 [file2 ...] icpc [options] file1 [file2 ...] where options represents zero or more compiler options fileN is a C/C++ source (.C .c .cc .cpp .cxx .c++ .i .ii), assembly (.s .S), object (.o), static library (.a), or other linkable file The icpc command uses the same compiler options as the icc command. Invoking the compiler using icpc compiles .c and .i files as C++. Invoking the compiler using icc compiles .c and .i files as C. Using icpc always links in C++ libraries. Using icc only links in C++ libraries if C++ source is provided on the command line. Commonly used options may be placed in the icc .cfg file. Some options listed are only available on a specific system i32 indicates the feature is available on systems based on IA-32 architecture i64em indicates the feature is available on systems using Intel(R) 64 architecture Compiler Option List -------------------- Optimization ------------ -O1 optimize for maximum speed, but disable some optimizations which increase code size for a small speed benefit -O2 optimize for maximum speed (DEFAULT) -O3 optimize for maximum speed and enable more aggressive optimizations that may not improve performance on some programs -O same as -O2 -Os enable speed optimizations, but disable some optimizations which increase code size for small speed benefit -O0 disable optimizations -fast enable -xHOST -O3 -ipo -no-prec-div -static options set by -fast cannot be overridden with the exception of -xHOST, list options separately to change behavior -Ofast enable -O3 -no-prec-div optimizations -fno-alias assume no aliasing in program -fno-fnalias assume no aliasing within functions, but assume aliasing across calls -f[no-]builtin disable inline expansion of intrinsic functions -fno-builtin- disable the intrinsic -ffunction-sections separate functions for the linker (COMDAT) -fdata-sections place each data item into its own section -f[no-]defer-pop disable optimizations which may result in deferred clearance of the stack arguments -nolib-inline disable inline expansion of intrinsic functions -f[no-]optimize-sibling-calls Optimize sibling and tail recursive calls. Enabled at levels -O2, -O3, -Os. Code Generation --------------- -x generate specialized code to run exclusively on processors indicated by as described below SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. Optimizes for the Intel NetBurst(R) microarchitecture. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the enhanced Pentium(R) M processor microarchitecture and Intel NetBurst(R) microarchitecture. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Core(TM) microarchitecture. SSE4.1 May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator instructions for Intel processors. May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for Intel(R) 45nm Hi-k next generation Intel Core(TM) microarchitecture. SSE4.2 May generate Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions supported by Intel(R) Core(TM) i7 processors. May generate Intel(R) SSE4 Vectorizing Compiler and Media Accelerator, Intel(R) SSSE3, SSE3, SSE2, and SSE instructions and it may optimize for the Intel(R) Core(TM) processor family. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. Optimizes for a future Intel processor. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. Optimizes for a future Intel processor. SSSE3_ATOM May generate MOVBE instructions for Intel processors, depending on the setting of option -minstruction. May also generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. Optimizes for the Intel(R) Atom(TM) processor and Intel(R) Centrino(R) Atom(TM) Processor Technology. -xHost generate instructions for the highest instruction set and processor available on the compilation host machine -ax[,,...] generate code specialized for processors specified by while also generating generic IA-32 instructions. includes one or more of the following: SSE2 May generate Intel(R) SSE2 and SSE instructions for Intel processors. SSE3 May generate Intel(R) SSE3, SSE2, and SSE instructions for Intel processors. SSSE3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. SSE4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel processors. AVX May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX2 May generate Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2), Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. CORE-AVX-I May generate Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm, Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions for Intel(R) processors. -mcpu= same as -mtune= -mtune= optimize for a specific pentium3 - optimize for Pentium(R) III processors pentium4 - optimize for Pentium(R) 4 processor (DEFAULT) -march= generate code exclusively for a given core-avx2 - processors that support Intel(R) Advanced Vector Extensions 2 (Intel(R) AVX2) core-avx-i - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX), including instructions in Intel(R) Core 2(TM) processors in process technology smaller than 32nm corei7-avx - processors that support Intel(R) Advanced Vector Extensions (Intel(R) AVX) corei7 - processors that support Intel(R) SSE4 Efficient Accelerated String and Text Processing instructions atom - processors that support MOVBE instructions core2 - Intel(R) Core 2(TM) processor family pentium-m - Intel(R) Pentium(R) M processors pentium4 - Intel(R) Pentium(R) 4 processors pentium3 - Intel(R) Pentium(R) III processors (Linux only) -msse3 May generate Intel(R) SSE3, SSE2, and SSE instructions -mssse3 May generate Intel(R) SSSE3, SSE3, SSE2, and SSE instructions -msse4 Enable -msse4.2 -msse4.1 May generate Intel(R) SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -msse4.2 May generate Intel(R) SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -mavx May generate Intel(R) AVX, SSE4.2, SSE4.1, SSSE3, SSE3, SSE2, and SSE instructions -masm= generate asm instructions specified by , which may be att (DEFAULT) or intel -mmic build an application that runs natively on Intel(R) MIC Architecture -minstruction= Refine instruction set output for the selected target processor [no]movbe - Do/do not generate MOVBE instructions with SSSE3_ATOM (requires -xSSSE3_ATOM) -f[no-]omit-frame-pointer enable(DEFAULT)/disable use of EBP as general purpose register. -fno-omit-frame-pointer replaces -fp -f[no-]exceptions enable/disable(DEFAULT) C++ exception handling table generation -fnon-call-exceptions enable/disable(DEFAULT) code that allows exceptions from trapping instructions to be caught -regcall make __regcall the default calling convention -hotpatch[=n] generate padding bytes for function entries to enable image hotpatching. If specified, use 'n' as the padding. -fasynchronous-unwind-tables determines whether unwind information is precise at an instruction boundary or at a call boundary. -fno-asynchronous-unwind-tables is the default for IA-32 architecture. -fextend-arguments=[32|64] By default, unprototyped scalar integer arguments are passed in 32-bits (sign-extended if necessary). On Intel(R) 64, unprototyped scalar integer arguments may be extended to 64-bits. Interprocedural Optimization (IPO) ---------------------------------- -[no-]ip enable(DEFAULT)/disable single-file IP optimization within files -ipo[n] enable multi-file IP optimization between files -ipo-c generate a multi-file object file (ipo_out.o) -ipo-S generate a multi-file assembly file (ipo_out.S) -ip-no-inlining disable full and partial inlining -ip-no-pinlining disable partial inlining -ipo-separate create one object file for every source file (overrides -ipo[n]) -ipo-jobs specify the number of jobs to be executed simultaneously during the IPO link phase Advanced Optimizations ---------------------- -unroll[n] set maximum number of times to unroll loops. Omit n to use default heuristics. Use n=0 to disable the loop unroller -[no-]unroll-aggressive enables more aggressive unrolling heuristics -funroll-loops unroll loops based on default heuristics -[no-]scalar-rep enable(DEFAULT)/disable scalar replacement (requires -O3) -[no-]ansi-alias enable/disable(DEFAULT) use of ANSI aliasing rules optimizations; user asserts that the program adheres to these rules -[no-]ansi-alias-check enable(DEFAULT)/disable ANSI alias checking when using -ansi-alias -[no-]complex-limited-range enable/disable(DEFAULT) the use of the basic algebraic expansions of some complex arithmetic operations. This can allow for some performance improvement in programs which use a lot of complex arithmetic at the loss of some exponent range. -[no-]alias-const enable/disable(DEFAULT) a heuristic stating that if two arguments to a function have pointer type, a pointer to const does not alias a pointer to non-const. Also known as the input/output buffer rule, it assumes that input and output buffer arguments do not overlap. -fargument-alias arguments may alias each other and may alias global storage -fargument-noalias arguments do not alias each other but may alias global storage -fargument-noalias-global arguments do not alias each other and do not alias global storage -ftls-model= change thread-local storage model, where can be the following: global-dynamic, local-dynamic, initial-exec or local-exec -[no-]opt-multi-version-aggressive enables more aggressive multi-versioning to check for pointer aliasing and scalar replacement -opt-ra-region-strategy[=] select the method that the register allocator uses to partition each routine into regions routine - one region per routine block - one region per block trace - one region per trace loop - one region per loop default - compiler selects best option -[no-]vec enables(DEFAULT)/disables vectorization -[no-]vec-guard-write enables cache/bandwidth optimization for stores under conditionals within vector loops -vec-threshold[n] sets a threshold for the vectorization of loops based on the probability of profitable execution of the vectorized loop in parallel -opt-malloc-options={0|1|2|3|4} specify malloc configuration parameters. Specifying a non-zero value will cause alternate configuration parameters to be set for how malloc allocates and frees memory -opt-calloc enable/disable(DEFAULT) calls to fast calloc function -opt-jump-tables= control the generation of jump tables default - let the compiler decide when a jump table, a series of if-then-else constructs or a combination is generated large - generate jump tables up to a certain pre-defined size (64K entries) - generate jump tables up to in size use -no-opt-jump-tables to lower switch statements as chains of if-then-else constructs -fno-jump-tables do not generate jump tables for switches and if-then-else statements -opt-block-factor= specify blocking factor for loop blocking -ffreestanding compile in a freestanding environment where the standard library may not be present -opt-streaming-stores specifies whether streaming stores are generated always - enables generation of streaming stores under the assumption that the application is memory bound auto - compiler decides when streaming stores are used (DEFAULT) never - disables generation of streaming stores -ipp[=] link some or all of the Intel(R) Integrated Performance Primitives (Intel(R) IPP) libraries and bring in the associated headers common - link using the main libraries set. This is the default value when -ipp is specified crypto - link using the main libraries set and the crypto library gen - link using the main libraries set and the fixed size generated functions library -ipp-link= choose whether to link with static or dynamic libraries to support Intel(R) Integrated Performance Primitives (Intel(R) IPP) dynamic - link using the dynamic libraries set. This is the default value when -ipp is specified on Windows static - link using the static libraries set. This is the default value when -ipp is specified on Linux static_thread - link using the optional threaded libraries set Note: these are provided in a separate install kit nonpic - link using the version of the libraries that do not have position independent code nonpic_crypto - link using the crypto library and the version of the libraries that do not have position independent code -mkl[=] link to the Intel(R) Math Kernel Library (Intel(R) MKL) and bring in the associated headers parallel - link using the threaded Intel(R) MKL libraries. This is the default when -mkl is specified sequential - link using the non-threaded Intel(R) MKL libraries cluster - link using the Intel(R) MKL Cluster libraries plus the sequential Intel(R) MKL libraries -tbb link to the Intel(R) Threading Building Blocks (Intel(R) TBB) libraries and bring in the associated headers -[no-]opt-subscript-in-range assumes no overflows in the intermediate computation of the subscripts -[no-]use-intel-optimized-headers take advantage of the optimized header files -cilk-serialize run a Cilk program as a C/C++ serialized program -[no-]intel-extensions enable(DEFAULT)/disable C/C++ language extensions such as array notation, Intel(R) Cilk(TM) Plus language extensions, and support for decimal floating-point types. -[no-]opt-matmul replace matrix multiplication with calls to intrinsics and threading libraries for improved performance (DEFAULT at -O3 -parallel) -[no-]simd enables(DEFAULT)/disables vectorization using simd pragma -guide-opts= tells the compiler to analyze certain code and generate recommendations that may improve optimizations -guide-file[=] causes the results of guide to be output to a file -guide-file-append[=] causes the results of guide to be appended to a file -guide[=] lets you set a level (1 - 4) of guidance for auto-vectorization, auto-parallelization, and data transformation (DEFAULT is 4 when the option is specified) -guide-data-trans[=] lets you set a level (1 - 4) of guidance for data transformation (DEFAULT is 4 when the option is specified) -guide-par[=] lets you set a level (1 - 4) of guidance for auto-parallelization (DEFAULT is 4 when the option is specified) -guide-vec[=] lets you set a level (1 - 4) of guidance for auto-vectorization (DEFAULT is 4 when the option is specified) -guide-profile=<[file|dir]>[,[file|dir],...] specify a loop profiler data file (or set of files in a directory) when using the -guide option -opt-mem-layout-trans[=] controls the level of memory layout transformations performed by the compiler 0 - disable memory layout transformations (same as -no-opt-mem-layout-trans) 1 - enable basic memory layout transformations 2 - enable more memory layout transformations (DEFAULT when the option is specified) 3 - enable aggressive memory layout transformations -opt-prefetch[=n] enable levels of prefetch insertion, where 0 disables. n may be 0 through 4 inclusive. Default is 2. -no-opt-prefetch disable(DEFAULT) prefetch insertion. Equivalent to -opt-prefetch=0 -opt-prefetch-distance=n1[,n2] specify the prefetch distance (how many iterations ahead, use n1 and n2 values such that n1>=n2) to be used for compiler generated prefetches inside loops. n1 indicates distance from memory to L2 cache and n2 indicates distance from L2 to L1. (Intel(R) MIC Architecture specific) -opt-threads-per-core=n specifies the number of threads (1 - 4) per core to be used for an application (Intel(R) MIC Architecture specific) -opt-streaming-cache-evict=n specifies the cache line eviction level (0 - 3) when streaming loads/stores are used. (Intel(R) MIC Architecture specific) -opt-assume-safe-padding assume that variables and dynamically allocated memory are padded (Intel(R) MIC Architecture specific) Profile Guided Optimization (PGO) --------------------------------- -prof-dir specify directory for profiling output files (*.dyn and *.dpi) -prof-src-root specify project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -prof-src-root-cwd specify the current directory as the project root directory for application source files to enable relative path resolution during profile feedback on sources below that directory -[no-]prof-src-dir specify whether directory names of sources should be considered when looking up profile records within the .dpi file -prof-file specify file name for profiling summary file -[no-]prof-data-order enable/disable(DEFAULT) static data ordering with profiling -[no-]prof-func-order enable/disable(DEFAULT) function ordering with profiling -[no-]prof-func-groups enable(DEFAULT with PGO)/disable function grouping -prof-gen[=keyword] instrument program for profiling. Optional keyword may be srcpos or globdata -no-prof-gen disable profiling instrumentation -prof-use[=] enable use of profiling information during optimization weighted - invokes profmerge with -weighted option to scale data based on run durations [no]merge - enable(default)/disable the invocation of the profmerge tool -no-prof-use disable use of profiling information during optimization -p compile and link for function profiling with UNIX gprof tool On IA32 and Intel(r)64, -pg is also valid -f[no-]instrument-functions determine whether function entry and exit points are instrumented -prof-hotness-threshold= set the hotness threshold for function grouping and function ordering val indicates percentage of functions to be placed in hot region. This option requires -prof-use and -prof-func-groups or -prof-func-order -prof-value-profiling=[,,...] limit value profiling none - inhibit all types of value profiling nodivide - inhibit value profiling of non-compile time constants used in division or remainder operations noindcall - inhibit value profiling of function addresses at indirect call sites -profile-functions enable instrumentation in generated code for collecting function execution time profiles -profile-loops: enable instrumentation in generated code for collecting loop execution time profiles inner - instrument inner loops outer - instrument outer loops all - instrument all loops -profile-loops-report: Control the level of instrumentation inserted for reporting loop execution profiles 1 - report loop times 2 - report loop times and iteration counts Optimization Reports -------------------- -vec-report[n] control amount of vectorizer diagnostic information n=0 no diagnostic information n=1 indicate vectorized loops (DEFAULT when enabled) n=2 indicate vectorized/non-vectorized loops n=3 indicate vectorized/non-vectorized loops and prohibiting data dependence information n=4 indicate non-vectorized loops n=5 indicate non-vectorized loops and prohibiting data dependence information n=6 indicate vectorized/non-vectorized loops with greater details and prohibiting data dependence information n=7 indicate vector code quality message ids and data values for vectorized loops -opt-report [n] generate an optimization report to stderr 0 disable optimization report output 1 minimum report output 2 medium output (DEFAULT when enabled) 3 maximum report output -opt-report-file= specify the filename for the generated report -opt-report-phase= specify the phase that reports are generated against -opt-report-routine= reports on routines containing the given name -opt-report-help display the optimization phases available for reporting -tcheck [mode] enable analysis of threaded applications (requires Intel(R) Thread Checker; cannot be used with compiler alone) tci - instruments a program to perform a thread-count-independent analysis tcd - instruments a program to perform a thread-count-dependent analysis (DEFAULT when mode is not used) api - instruments a program at the api-imports level -tcollect[=] inserts instrumentation probes calling the Intel(R) Trace Collector API. The library -l is linked in the default being -lVT (requires Intel(R) Trace Collector) -tcollect-filter file Enable or disable the instrumentation of specified functions. (requires Intel(R) Trace Collector) OpenMP* and Parallel Processing ------------------------------ -openmp enable the compiler to generate multi-threaded code based on the OpenMP* directives (same as -fopenmp) -openmp-stubs enables the user to compile OpenMP programs in sequential mode. The OpenMP directives are ignored and a stub OpenMP library is linked (sequential) -openmp-report{0|1|2} control the OpenMP parallelizer diagnostic level -openmp-lib choose which OpenMP library version to link with compat - use the GNU compatible OpenMP run-time libraries (DEFAULT) -openmp-link choose whether to link with the static or dynamic OpenMP libraries. Default is dynamic. -openmp-task choose which OpenMP tasking model to support omp - support OpenMP 3.0 tasking (DEFAULT) intel - support Intel taskqueuing -openmp-threadprivate= choose which threadprivate implementation to use compat - use the GNU compatible thread local storage legacy - use the Intel compatible implementation (DEFAULT) -parallel enable the auto-parallelizer to generate multi-threaded code for loops that can be safely executed in parallel -par-report{0|1|2|3} control the auto-parallelizer diagnostic level -par-threshold[n] set threshold for the auto-parallelization of loops where n is an integer from 0 to 100 -par-runtime-control[n] Control parallelizer to generate runtime check code for effective automatic parallelization. n=0 no runtime check based auto-parallelization n=1 generate runtime check code under conservative mode (DEFAULT when enabled) n=2 generate runtime check code under heuristic mode n=3 generate runtime check code under aggressive mode -par-schedule-static[=n] Specifies a scheduling algorithm for DO loop iteration. Divides iterations into contiguous pieces. Size n if specified, equal sized pieces if not. -par-schedule-static_balanced[=n] Divides iterations into even-sized chunks. Size n if specified, equal sized pieces if not. -par-schedule-static-steal[=n] Divides iterations into even-sized chunks, but allows threads to steal parts of chunks from neighboring threads -par-schedule-dynamic[=n] Specifies a scheduling algorithm for DO loop iteration. Assigns iterations to threads in chunks dynamically. Chunk size is n iterations if specified, otherwise 1. -par-schedule-guided[=n] Specifies a scheduling algorithm for DO loop iteration. Indicates a minimum number of iterations. If specified, n is the minimum number, otherwise 1. -par-schedule-guided-analytical[=n] Divides iterations by using exponential distribution or dynamic distributions. -par-schedule-runtime Specifies a scheduling algorithm for DO loop iteration. Defers the scheduling decision until runtime. -par-schedule-auto Lets the compiler or run-time system determine the scheduling algorithm. -par-affinity=[,...][,][,] tune application performance by setting different thread affinity -par-num-threads= tune application performance by setting different number of threads -parallel-source-info[=n] enable(DEFAULT)/disable the emission of source location information for parallel code generation with OpenMP and auto-parallelization 0 - disable (same as -no-parallel-source-info) 1 - emit routine name and line information (DEFAULT) 2 - emit path, file, routine name and line information Floating Point -------------- -fp-model enable floating point model variation [no-]except - enable/disable floating point semantics fast[=1|2] - enables more aggressive floating point optimizations precise - allows value-safe optimizations source - enables intermediates in source precision strict - enables -fp-model precise -fp-model except, disables contractions and enables pragma stdc fenv_access double - rounds intermediates in 53-bit (double) precision extended - rounds intermediates in 64-bit (extended) precision -fp-speculation= enable floating point speculations with the following conditions: fast - speculate floating point operations (DEFAULT) safe - speculate only when safe strict - same as off off - disables speculation of floating-point operations -pc32 set internal FPU precision to 24 bit significand -pc64 set internal FPU precision to 53 bit significand -pc80 set internal FPU precision to 64 bit significand (DEFAULT) -mp1 improve floating-point precision (speed impact less than -mp) -mieee-fp same as -mp, can be disabled with -mno-ieee-fp -[no-]prec-sqrt determine if certain square root optimizations are enabled -[no-]prec-div improve precision of FP divides (some speed impact) -[no-]fast-transcendentals generate a faster version of the transcendental functions -[no-]fp-port round fp results at assignments and casts (some speed impact) -fp-stack-check enable fp stack checking after every function/procedure call -rcd rounding mode to enable fast float-to-int conversions -[no-]ftz enable/disable flush denormal results to zero -[no-]fma enable/disable the combining of floating point multiplies and add/subtract operations -fp-trap=[,,...] control floating point traps at program start. can be of the following values [no]divzero - [Do not] trap on division by zero [no]inexact - [Do not] trap on inexact result [no]invalid - [Do not] trap on invalid operation [no]overflow - [Do not] trap on overflow [no]underflow - [Do not] trap on underflow [no]denormal - [Do not] trap on denormal all - enable trap on all of the above none - trap on none of the above common - trap on most commonly used IEEE traps (invalid, division by zero, overflow) -fp-trap-all=[,,...] control floating point traps in every routine. can be of the values specified in -fp-trap Inlining -------- -inline-level= control inline expansion: n=0 disable inlining n=1 inline functions declared with __inline, and perform C++ inlining n=2 inline any function, at the compiler's discretion -f[no-]inline inline functions declared with __inline, and perform C++ inlining -f[no-]inline-functions inline any function at the compiler's discretion -finline-limit= set maximum number of statements a function can have and still be considered for inlining -fgnu89-inline use C89 semantics for "inline" functions when in C99 mode -inline-min-size= set size limit for inlining small routines -no-inline-min-size no size limit for inlining small routines -inline-max-size= set size limit for inlining large routines -no-inline-max-size no size limit for inlining large routines -inline-max-total-size= maximum increase in size for inline function expansion -no-inline-max-total-size no size limit for inline function expansion -inline-max-per-routine= maximum number of inline instances in any function -no-inline-max-per-routine no maximum number of inline instances in any function -inline-max-per-compile= maximum number of inline instances in the current compilation -no-inline-max-per-compile no maximum number of inline instances in the current compilation -inline-factor= set inlining upper limits by n percentage -no-inline-factor do not set set inlining upper limits -inline-forceinline treat inline routines as forceinline -inline-calloc directs the compiler to inline calloc() calls as malloc()/memset() Output, Debug, PCH ------------------ -c compile to object (.o) only, do not link -S compile to assembly (.s) only, do not link -fsource-asm produce assembly file with optional source annotations (requires -S) -f[no-]verbose-asm produce assembly file with compiler comments (DEFAULT) (requires -S) -fcode-asm produce assembly file with optional code annotations (requires -S) -use-msasm support Microsoft* style assembly language insertion using MASM style syntax -fasm-blocks enables the use of blocks and entire functions of assembly code within a C or C++ file -Fa[file] name assembly file (or directory for multiple files; i.e. /FaMYDIR) -Fo[file] name object file (or directory for multiple files; i.e. /FoMYDIR) -o name output file -g produce symbolic debug information in object file (implies -O0 when another optimization option is not explicitly set) -debug [keyword] enable debug information and control output of enhanced debug information keywords: all, full, minimal, none, [no]inline-debug-info [no]variable-locations, [no]semantic-stepping, extended, [no]pubnames parallel [no]expr-source-pos -fvar-tracking same as -debug variable_locations -fvar-tracking-assignments same as -debug semantic_stepping -g0 disable generation of symbolic debug information -gdwarf-2 enable generation of debug information using the DWARF2 format -gdwarf-3 enable generation of debug information using the DWARF3 format -grecord-gcc-switches record command line options in the DW_AT_producer attribute in the DWARF debugging information -fno-merge-debug-strings do not merge identical debug strings in different object files -fno-merge-constants do not merge identical string constants in different object files -ftrapuv trap uninitialized variables -map-opts enable option mapping tool -print-multi-lib print information about libraries being used -pch-create create precompiled header file -pch-use use precompiled header file -pch enable automatic precompiled header file creation/usage -pch-dir name precompiled header directory -check-pointers= Specifies what type of bounds checking occurs. Possible values are: none - Disables bounds checking. This is the default. rw - Checks bounds for reads and writes through pointers. write - Checks bounds for writes through pointers only. This switch is only valid with Intel(R) Parallel Studio XE -check-pointers-dangling= Specifies what type of dangling pointer checking occurs. Possible values are: none - Disables dangling pointer checking. This is the default. heap - Check dangling references on heap. stack - Check dangling references on stack. all - Check dangling references on both heap and stack. This switch is only valid with Intel(R) Parallel Studio XE -[no-]check-pointers-undimensioned Bounds checking occurs for memory access through arrays that are declared without dimensions. This checking occurs for both dimensioned and undimensioned arrays. This switch is only valid with Intel(R) Parallel Studio XE Preprocessor ------------ -A[] create an assertion having value -C do not strip comments -D[=] define macro -U remove predefined macro -E preprocess to stdout -EP preprocess to stdout, omitting #line directives -P preprocess to file, omitting #line directives -I add directory to include file search path -idirafter add directory to the second include file search path (after -I) -isystem add directory to the start of the system include path -X, -nostdinc remove standard directories from include file search path -nostdinc++ remove standard C++ directories from include file search path -iprefix use with -iwithprefix as a prefix -iwithprefix append to the prefix passed in by -iprefix and put it on the include search path at the end of the include directories -iwithprefixbefore similar to -iwithprefix except the include directory is placed in the same place as -I command line include directories -iquote add directory to the front of the include file search path for files included with quotes, but not brackets -imacros treat as an #include file, but throw away all preprocessing while macros defined remain defined -H print include file order -B find libraries, headers and executables in -M generate makefile dependency information -MM similar to -M, but do not include system header files -MG similar to -M, but treat missing header files as generated files -MD preprocess and compile, generating output file containing dependency information ending with extension .d -MMD similar to -MD, but do not include system header files -MF generate makefile dependency information in file (must specify -M or -MM) -MP add a phony target for each dependency -MT change the default target rule for dependency generation -MQ same as -MT, but quotes special Make characters -dM output macro definitions in effect after preprocessing (use with -E) -dD same as -dM, but output #define directives in preprocessed source -dN same as -dD, but #define directives contain only macro names -gcc Predefine the "__GNUC__", "__GNUC_MINOR__", and "__GNUC_PATCHLEVEL__" macros (DEFAULT) -no-gcc Do not predefine GNUC macros listed in -gcc mode. Warning: can prevent correct system header compilation, see -gcc-sys -gcc-sys same as -no-gcc, except that the GNU macros are defined only while preprocessing the system include headers -no-icc do not predefine the "__ICC" and "__INTEL_COMPILER" macros. Warning: can prevent correct Intel header compilation -pragma-optimization-level=[Intel|GCC] process #pragma optimize using Intel (DEFAULT) or GCC syntax Component Control ----------------- -Qoption,, pass options to tool specified by -Qlocation,, set as the location of tool specified by -Qinstall set as root of compiler installation Language -------- -std= enable language support for , as described below c99 enable C99 support for C programs c++11 enable C++11 experimental support for C++ programs c++0x same as c++11 -x all source files found subsequent to -x will be recognized as one of the following types: c - C source file c++ - C++ source file c-header - C header file cpp-output - C pre-processed file c++-cpp-output - C++ pre-processed file assembler - assembly file assembler-with-cpp - assembly file that needs to be preprocessed none - revert to original file extension -ansi equivalent to GNU -ansi -strict-ansi strict ANSI conformance dialect -Zp[n] specify alignment constraint for structures where n=1,2,4,8,16. 16 is the default -fsyntax-only perform syntax and semantic checking only (no object file produced) -trigraphs support ISO C trigraphs (enabled in -ansi mode) -fpermissive allows extensions for some non-conformant code -funsigned-char change default char type to unsigned -fshort-enums allocate as many bytes as needed for enumerated types -f[no-]unsigned-bitfields change default bitfield type to unsigned -fno-rtti disable RTTI support -fno-implicit-templates never emit code for non-inline templates which are instantiated implicitly; only emit code for explicit instantiations -fno-implicit-inline-templates do not emit code for implicit instantiations of inline templates -ftemplate-depth-[n] control the depth in which recursive templates are expanded -[no]align analyze and reorder memory layout for variables and arrays -[no-]restrict enable/disable the 'restrict' keyword for disambiguating pointers -[no-]early-template-check enable/disable (DEFAULT) semantic checking of function template prototypes (before instantiation). -help-pragma output supported pragmas and their usage syntax -ffriend-injection inject friend functions into the enclosing namespace. Use -fno-friend-injection to disable -check=[,,...] check run-time conditions. keywords: [no]conversions, [no]stack, [no]uninit Compiler Diagnostics -------------------- -w disable all warnings -w control diagnostics n = 0 enable errors only (same as -w) n = 1 enable warnings and errors (DEFAULT) n = 2 enable verbose warnings, warnings and errors n = 3 enable remarks, verbose warnings, warnings and errors -Wbrief print brief one-line diagnostics -Werror force warnings to be reported as errors -Werror-all force warnings and currently enabled remarks to be reported as errors -Wall enable all warnings -Wremarks enable all remarks and comments -Wcheck enable more strict diagnostics -Weffc++ enable effective C++ diagnostic warnings -wo[,,...] issue diagnostics L1 through LN only once -W[no-]fatal-errors ends compilation after the first error encountered -W[no-]format enable argument checking for calls to printf, scanf, etc -W[no-]format-security warn for uses of format strings and specifiers in printf, scanf, etc that may introduce security problems -W[no-]missing-declarations warn for global functions and variables without prior declaration -W[no-]missing-prototypes warn for missing prototypes -W[no-]strict-aliasing warn for code that might violate the optimizer's strict aliasing rules. Warnings are issued only when using -fstrict-aliasing or -ansi-alias. -W[no-]strict-prototypes warn for functions declared or defined without specified argument types -W[no-]pointer-arith warn for questionable pointer arithmetic -W[no-]uninitialized warn if a variable is used before being initialized -Winline enable inline diagnostics -W[no-]deprecated print warnings related to deprecated features -W[no-]abi warn if generated code is not C++ ABI compliant -Wcontext-limit= set maximum number of template instantiation contexts shown in diagnostic -Wcast-qual warn if cast is used to override pointer type qualifier -W[no-]unused-function warn if declared function is not used -W[no-]unused-parameter warn if declared function parameter is not used -W[no-]unknown-pragmas warn if an unknown #pragma directive is used (DEFAULT) -W[no-]main warn if return type of main is not expected -W[no-]comment[s] warn when comment -W[no-]conversion warn for implicit conversions that may alter a value -W[no-]return-type warn when a function uses the default int return type and warn when a return statement is used in a void function -W[no-]extra-tokens warn about extra tokens after preprocessor directives -W[no-]pragma-once warn about the use of #pragma once -W[no-]invalid-pch warn about problems with existing precompiled headers -W[no-]shadow warn when a variable declaration hides a previous declaration -Woverloaded-virtual warn when a function declaration hides virtual functions from a base class -W[no-]trigraphs warn about the recognition and conversion of trigraphs -W[no-]multichar warn if a multicharacter constant ('ABC') is used -W[no-]overflow warn for operations that could result in integer overflow -Wwrite-strings Issues a diagnostic message if const char * is converted to (non-const) char *. -W[no-]sign-compare warn for comparisons between signed and unsigned values that could produce unintended results after sign conversion -Wp64 print diagnostics for 64-bit porting -W[no-]shorten-64-to-32 warn for values implicitly converted from a 64-bit to a 32-bit type. Similar to -Wp64 -[no]traceback specify whether the compiler generates data to allow for source file traceback information at runtime (only to be used when linking with Fortran programs) -diag-enable [,,...] enable the specified diagnostics or diagnostic groups -diag-disable [,,...] disable the specified diagnostics or diagnostic groups where may be individual diagnostic numbers or group names. where group names include: sc[n] - perform source code analysis: n=1 for critical errors, n=2 for all errors and n=3 for all errors and warnings sc- {full|concise|precise} - perform static analysis and determine the analysis mode. Full mode - attempts to find all program weaknesses, even at the expense of more false positives. Concise mode - attempts to reduce false positives somewhat more than reducing false negatives. Precise mode - attempts to avoid all false positives Default: full if -diag-enable sc{[1|2|3]} is present; otherwise None (static analysis diagnostics are disabled). sc-include - perform source code analysis on include files sc-single-file - This option tells static analysis to process each file individually. Default: OFF sc-enums - This option tells static analysis to treat enumeration variables as known values equal to any one of the associated enumeration literals. Default: OFF sc-parallel[n] - perform analysis of parallelization in source code: n=1 for critical errors, n=2 for errors, n=3 for all errors and warnings thread - enable diagnostics to aid in thread-enabling source port-win - enable diagnostics for GNU extensions that may cause errors when porting to Windows warn - diagnostic messages that have "warning" severity level. error - diagnostic messages that have "error" severity level. remark - diagnostic messages that are remarks or comments. vec - diagnostic messages issued by the vectorizer. par - diagnostic messages issued by the auto-parallelizer openmp - diagnostic messages issued by the OpenMP* parallelizer. cpu-dispatch Specifies the CPU dispatch remarks. -diag-error [,,...] output the specified diagnostics or diagnostic groups as errors -diag-warning [,,...] output the specified diagnostics or diagnostic groups as warnings -diag-remark [,,...] output the the specified diagnostics or diagnostic groups as remarks -diag-dump display the currently enabled diagnostic messages to stdout or to a specified diagnostic output file. -diag-sc-dir= directory where diagnostics from static analysis are created, rather than current working directory. -diag-file[=] where diagnostics are emitted to. Not specifying this causes messages to be output to stderr -diag-file-append[=] where diagnostics are emitted to. When already exists, output is appended to the file -[no-]diag-id-numbers enable(DEFAULT)/disable the diagnostic specifiers to be output in numeric form -diag-error-limit specify the maximum number of errors emitted -diag-once [,,...] issue diagnostics v1 through vN only once -W[no-]pch-messages enable(DEFAULT)/disable PCH information messages Miscellaneous ------------- -V display compiler version information -dumpversion display the compiler version number only -dumpmachine display the target machine only --version display GCC style version information -sox[=[,keyword]] enable saving of compiler options, version and additional information in the executable. Use -no-sox to disable(DEFAULT) profile - include profiling data inline - include inlining information -save-temps store the intermediate files in current directory and name them based on the source file. Only saves files that are generated by default -dryrun show driver tool commands but do not execute tools -v show driver tool commands and execute tools -watch= tells the driver to output processing information keywords: all, none (same as -nowatch), [no]source, [no]cmd (same as -v) [no]mic-cmd -nowatch suppress processing information output (DEFAULT) -[no-]multibyte-chars provide support for multi-byte characters -multiple-processes[=] create multiple processes that can be used to compile large numbers of source files at the same time Offload ------- -offload-attribute-target= flags every global routine and global data object in the source file with the offload attribute target(mic) -offload-option,,,"option list" appends additional options for offload compilations given the target and tool. The option list is a space separated quoted list of options target - mic tool - compiler, ld, as -no-offload disable any offload usage Data ---- -Zp[n] specify alignment constraint for structures (n=1,2,4,8,16 -Zp16 DEFAULT) -fminshared Compilation is for the main executable. Absolute addressing can be used and non-position independent code generated for symbols that are at least protected -fcommon Enables the compiler to treat common variables as if they were defined. That in turn allows the use of gprel addressing of common data variables. -fno-common disables -freg-struct-return return struct and union values in registers when possible -fstack-security-check enable overflow security checks. -f[no-]stack-security-check disables (DEFAULT) -fstack-protector enable stack overflow security checks. -f[no-]stack-protector disables (DEFAULT) -fstack-protector-all enable stack overflow security checks including functions. -f[no-]stack-protector-all disables (DEFAULT) -fpic, -fPIC generate position independent code (-fno-pic/-fno-PIC is DEFAULT) -fpie, -fPIE generate position independent code that will be linked into an executable (-fno-pie/-fno-PIE is DEFAULT) -auto-ilp32 specify that the application cannot exceed a 32-bit address space (-ipo[n] required) -auto-p32 instructs the compiler to analyze the program to determine if there are 64-bit pointers that can be safely shrunk to 32-bit pointers. (-ipo required) -[no-]global-hoist enable(DEFAULT)/disable external globals are load safe -f[no-]keep-static-consts enable/disable(DEFAULT) emission of static const variables even when not referenced -fpack-struct pack structure members together -f[no-]math-errno set ERRNO after calling standard math library functions -no-bss-init disable placement of zero-initialized variables in BSS (use DATA) -f[no-]zero-initialized-in-bss put explicitly zero initialized variables into the DATA section instead of the BSS section -mcmodel= use a specific memory model to generate code and store data small - Restricts code and data to the first 2GB of address space (DEFAULT) medium - Restricts code to the first 2GB; it places no memory restriction on data large - Places no memory restriction on code or data -falign-functions=[2|16] align the start of functions on a 2 (DEFAULT) or 16 byte boundary -falign-functions align the start of functions to an optimal machine-dependent value. -fno-align-functions (DEFAULT) aligns on a 2-byte boundary -fvisibility=[extern|default|protected|hidden|internal] Global symbols (data and functions) will get the visibility attribute given by default. Symbol visibility attributes explicitly set in the source code or using the symbol visibility attribute file options will override the -fvisibility setting -fvisibility-extern= Space separated symbols listed in the argument will get visibility set to extern -fvisibility-default= Space separated symbols listed in the argument will get visibility set to default -fvisibility-protected= Space separated symbols listed in the argument will get visibility set to protected -fvisibility-hidden= Space separated symbols listed in the argument will get visibility set to hidden -fvisibility-internal= Space separated symbols listed in the argument will get visibility set to internal -fvisibility-inlines-hidden mark inline member functions as hidden -fimf-absolute-error=value[:funclist] define the maximum allowable absolute error for math library function results value - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-accuracy-bits=bits[:funclist] define the relative error, measured by the number of correct bits, for math library function results bits - a positive, floating-point number funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-arch-consistency=value[:funclist] ensures that the math library functions produce consistent results across different implementations of the same architecture value - true or false funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-max-error=ulps[:funclist] defines the maximum allowable relative error, measured in ulps, for math library function results ulps - a positive, floating-point number conforming to the format [digits][.digits][{e|E}[sign]digits] funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-precision=value[:funclist] defines the accuracy (precision) for math library functions value - defined as one of the following values high - equivalent to max-error = 0.6 medium - equivalent to max-error = 4 (DEFAULT) low - equivalent to accuracy-bits = 11 (single precision); accuracy-bits = 26 (double precision) funclist - optional comma separated list of one or more math library functions to which the attribute should be applied -fimf-domain-exclusion=classlist[:funclist] indicates the domain on which a function is evaluated Compatibility ------------- -gcc-name= name and location of gcc if not where expected -gxx-name= name and location of g++ if not where expected -fabi-version= directs the compiler to select a specific ABI implementation 0 - most recent ABI implementation 1 - g++ 3.2 compatible ABI implementation 2 - most conformant ABI implementation -fms-dialect[=] enable compatibility with a specific Microsoft* Visual Studio version 9 - Microsoft* Visual Studio 2008 compatibility 10 - Microsoft* Visual Studio 2010 compatibility 11 - Microsoft* Visual Studio 2012 compatibility Linking/Linker -------------- -L instruct linker to search for libraries -l instruct the linker to link in the -l library -shared-intel link Intel provided libraries dynamically -static-intel link Intel provided libraries statically -shared-libgcc link libgcc dynamically -static-libgcc link libgcc statically -static-libstdc++ link libstdc++ statically -dynamic-linker select dynamic linker other than the default -no-cxxlib do not link in C++ runtime libraries -cxxlib[=dir] link using C++ run-time libraries provided with gcc dir is an optional top-level location for the gcc binaries and libraries -nodefaultlibs do not use standard libraries when linking -nostartfiles do not use standard startup files when linking -nostdlib do not use standard libraries and startup files when linking -static prevents linking with shared libraries -shared produce a shared object -Bstatic specify following libraries are linked statically -Bdynamic specify following libraries are linked dynamically -pthread use POSIX* thread library for multithreading support -cxxlib- tell the compiler which C++ run-time libraries to use nostd - do not link in standard C++ library -u pretend the is undefined -T direct linker to read link commands from -Xlinker pass directly to the linker for processing -Wa,[,,...] pass options o1, o2, etc. to the assembler -Wl,[,,...] pass options o1, o2, etc. to the linker for processing -Wp,[,,...] pass options o1, o2, etc. to the preprocessor -pie,-no_pie generate position independent code that will be linked into an executable (-pie is DEFAULT for Mac OS X 10.7 and later) -no-pie/-no_pie disables position independent code Linker Specific Options ----------------------- These options are specific to the linker. Details can be found in the linker documentation and man page -L -T -h -u -z -i -r -s -N -Bsymbolic -Bdynamic -Bstatic Deprecated Options ------------------ -export No replacement -export-dir No replacement -Ob use -inline-level= -i-dynamic use -shared-intel -i-static use -static-intel -inline-debug-info use -debug inline-debug-info -mp use -fp-model -use-asm No replacement -prof-genx use -prof-gen=srcpos -gcc-version use -gcc-name= -tprofile No replacement -xK use -mia32 -axK use -mia32 -xW use -msse2 -axW use -msse2 -xN use -xSSE2 -axN use -axSSE2 -xP use -xSSE3 -axP use -axSSE3 -xT use -xSSSE3 -axT use -axSSSE3 -xS use -xSSE4.1 -axS use -axSSE4.1 -xO use -msse3 -xSSE3_ATOM use -xSSSE3_ATOM -diag-enable sv use -diag-enable sc -diag-enable sv-include use -diag-enable sc-include -diag-disable sv use -diag-disable sc -diag-sv use -diag-enable sc -diag-sv-error use -diag-disable warning -diag-sv-include use -diag-enable sc-include -diag-sv-level No replacement -diag-sv-sup use -diag-disable [,,...] -A- use -U -c99 use -std=c99 -[no-]check-uninit use -check=[no]uninit -fwritable-strings no replacement -Kc++ use -x c++ -wn use -diag-error-limit -wd use -diag-disable -we use -diag-error -ww use -diag-warning -wr use -diag-remark -wo use -diag-once -help [category] print full or category help message Valid categories include advanced - Advanced Optimizations codegen - Code Generation compatibility - Compatibility component - Component Control data - Data deprecated - Deprecated Options diagnostics - Compiler Diagnostics float - Floating Point help - Help inline - Inlining ipo - Interprocedural Optimization (IPO) language - Language link - Linking/Linker misc - Miscellaneous opt - Optimization output - Output pgo - Profile Guided Optimization (PGO) preproc - Preprocessor reports - Optimization Reports openmp - OpenMP and Parallel Processing Copyright (C) 1985-2013, Intel Corporation. All rights reserved. * Other names and brands may be claimed as the property of others. Popping language C **** Configure header conftest.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef PETSC_DIR #define PETSC_DIR "/home/VNC/petsc-hg" #endif #ifndef HAVE_GZIP #define HAVE_GZIP 1 #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_GDB_DEBUGGER #define PETSC_USE_GDB_DEBUGGER 1 #endif #endif **** C specific Configure header conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif ******************************************************************************* UNABLE to EXECUTE BINARIES for ./configure ------------------------------------------------------------------------------- Cannot run executables created with C. If this machine uses a batch system to submit jobs you will need to configure using ./configure with the additional option --with-batch. Otherwise there is problem with the compilers. Can you compile and run code with your C/C++ (and maybe Fortran) compilers? See http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf ******************************************************************************* File "./config/configure.py", line 293, in petsc_configure framework.configure(out = sys.stdout) File "/home/VNC/petsc-hg/config/BuildSystem/config/framework.py", line 933, in configure child.configure() File "/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py", line 1528, in configure self.executeTest(self.checkCCompiler) File "/home/VNC/petsc-hg/config/BuildSystem/config/base.py", line 115, in executeTest ret = apply(test, args,kargs) File "/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py", line 532, in checkCCompiler self.checkCompiler('C') File "/home/VNC/petsc-hg/config/BuildSystem/config/setCompilers.py", line 448, in checkCompiler raise OSError(msg)