<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">This problem has 11088 equations and the two processor run has 2 equations partitioned to process 0 and 11086 to process 1. So I think you are hitting a corner case in the code when it reduces the number of active processors. I will need to debug this. <div><br></div><div>I might be able to reason this out with your data. I'm on travel through next week so I'm not sure when I wlll be able to take a look at this. I might ask for a binary matrix file for this two processor run. So if this is easy for you to do, then maybe you could just do this. In the mean time I will try to think about what is going wrong here.</div><div><br></div><div>This code should work now if you give it a more normal partitioning, but there is a bug here and I want to fix it.</div><div><br></div><div>Mark</div><div><br><div><div>On Jan 5, 2012, at 6:41 PM, Jed Brown wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div class="gmail_quote">On Thu, Jan 5, 2012 at 17:13, Ravi Kannan <span dir="ltr"><<a href="mailto:rxk@cfdrc.com">rxk@cfdrc.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Files are attached.</blockquote></div><br><div>Could you try attaching a debugger to get stack traces?</div><div><br></div><div>It is reducing to a smaller communicator for the coarse level. The processes are likely both hung later in gamg.c:createLevel(). Mark, the appearance is that all procs that call MPI_Comm_create() are also doing things on the newly created communicator, even though it will be MPI_COMM_NULL on processes that are not part of the subgroup. Also, I'm skeptical that you can get correct results with MatPartitioningSetAdjacency(mpart,adj) when mpart and adj are on different communicators. Those other rows of adj are not moved by MatPartitioningApply_Parmetis().</div>
<div><br></div><div>I must be confused about what is actually happening.</div>
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