[petsc-dev] PETSc-Cuda with gfortran 4.7

Satish Balay balay at mcs.anl.gov
Wed Mar 13 11:36:20 CDT 2013


Can you post your current nvcc.profile? [to see how its modified to specify a different
compiler]

thanks,
Satish

On Wed, 13 Mar 2013, Nystrom, William D wrote:

> Asmund,
> 
> Do the failures you report below occur in cuda code that is ultimately compiled with nvcc?
> I have not had problems compiling petsc-dev with cuda support on a Fedora 17 system
> which uses gcc-4.7.2 and gfortran-4.7.2.  However, I have gcc 4.6.3 installed also and
> have nvcc pointed at it by using the /usr/local/cuda/bin/nvcc.profile with a couple of lines
> added.  So, when I build petsc-dev on my Fedora 17 system, it uses gcc-4.7.2 and
> gfortran-4.7.2 for everything except cuda code located in .cu files.  I would worry about
> removing some functionality in 4.7.2 with your suggested modification.
> 
> Thanks,
> 
> Dave
> 
> --
> Dave Nystrom
> LANL HPC-5
> Phone: 505-667-7913
> Email: wdn at lanl.gov
> Smail: Mail Stop B272
>        Group HPC-5
>        Los Alamos National Laboratory
>        Los Alamos, NM 87545
> 
> 
> ________________________________________
> From: petsc-dev-bounces at mcs.anl.gov [petsc-dev-bounces at mcs.anl.gov] on behalf of Åsmund Ervik [Asmund.Ervik at sintef.no]
> Sent: Wednesday, March 13, 2013 6:32 AM
> To: Karl Rupp
> Cc: petsc-dev at mcs.anl.gov
> Subject: Re: [petsc-dev] PETSc-Cuda with gfortran 4.7
> 
> Hi Karli,
> 
> I don't think this interferes with anything else, since all it does is
> undef some C++ stuff which conflicts with CUDA, and was introduced in
> gcc 4.7. That is, the things it undefines are also undefined when one
> uses gcc 4.6 or lower. It is general for gcc >= 4.7.
> 
> Best regards,
> \AA smund
> 
> On 12. mars 2013 15:13, Karl Rupp wrote:
> > Hi Ervik,
> >
> > thanks for the hint. Do you happen to have any information on whether
> > the suggested fix interferes with other versions of GCC or CUDA? Is this
> > specific to version 4.7.2 or a 'general fix' for GCC?
> >
> > Best regards,
> > Karli
> >
> >
> > On 03/12/2013 02:35 AM, Åsmund Ervik wrote:
> >> Hi all,
> >>
> >> (This suggestion is two lines of code, so I hope it will survive the git/hg apocalypse/transition today. If not, I'll resend it tomorrow.)
> >>
> >> Trying to compile PETSc with Cuda enabled, following the example in config/examples/arch-cuda-double.py, I get an error with gfortran 4.7.2 when making (configure works fine).
> >> This error is apparently well-known with Cuda and gcc 4.7.2. To fix it, I added two lines to include/petsc-private/petscimpl.h:
> >> #undef _GLIBCXX_ATOMIC_BUILTINS
> >> #undef _GLIBCXX_USE_INT128
> >> and everything works fine. I guess you should add this to petsc-dev, possibly with some if-statement around these lines.
> >>
> >> Best regards,
> >> Åsmund Ervik
> >>
> >
> >
> 
> --
> Sendt fra Thunderbird
> 


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