[petsc-dev] Error while building MAGMA from PETSc

Matthew Knepley knepley at gmail.com
Thu Aug 15 15:01:37 CDT 2013


On Thu, Aug 15, 2013 at 2:43 PM, Harshad Sahasrabudhe
<hsahasra at purdue.edu>wrote:

> Attached is the diff and configure.log


The compile checking for the header is failing;

Possible ERROR while running preprocessor: In file included from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
                 from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
                 from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
                 from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6:
error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be
defined. This typically happens in Makefile.internal."
ret = 256
error message = {In file included from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
                 from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
                 from
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
                 from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6:
error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be
defined. This typically happens in Makefile.internal."
}
Source:
#include "confdefs.h"
#include "conffix.h"
#include <magma.h>

   Matt


> ----- Original Message -----
> From: "Jed Brown" <jedbrown at mcs.anl.gov>
> To: "Matthew Knepley" <knepley at gmail.com>
> Cc: "Harshad Sahasrabudhe" <hsahasra at purdue.edu>, "For users of the
> development version of PETSc" <petsc-dev at mcs.anl.gov>
> Sent: Thursday, August 15, 2013 3:33:33 PM
> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
>
>
>
> ... and send the changes you have made. One way to do that is to 'git add
> config/PETSc/packages/magma.py' and send the output if 'git diff master'.
> On Aug 15, 2013 2:28 PM, "Matthew Knepley" < knepley at gmail.com > wrote:
>
>
>
> On Thu, Aug 15, 2013 at 1:56 PM, Harshad Sahasrabudhe <
> hsahasra at purdue.edu > wrote:
>
>
>
>
> Hi,
>
> Now MAGMA compiles correctly and libmagma.a is generated, however PETSc
> says
>
> Downloaded magma could not be used. Please check install in
> /home/harshad/workspace/petsc-hg/arch-linux2-c-debug
>
> I am copying the generated library and include files to the install
> directory using
>
> includeDir = os.path.join(self.installDir, self.includedir)
> output,err,ret = PETSc.package.NewPackage.executeShellCommand('cd
> '+self.packageDir+' && mv -f lib/*.* '+libDir+'/. && cp -f include/*.*
> '+includeDir+'/.', timeout=2500, log = self.framework.log)
>
> I need help in resolving this error.
>
>
>
> Always send configure.log.
>
>
> Matt
>
>
> Thanks,
> Harshad
>
> ----- Original Message -----
> From: "Matthew Knepley" < knepley at gmail.com >
> To: "Harshad Sahasrabudhe" < hsahasra at purdue.edu >
> Cc: "For users of the development version of PETSc" <
> petsc-dev at mcs.anl.gov >
> Sent: Wednesday, August 14, 2013 6:27:04 PM
> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
>
>
> On Wed, Aug 14, 2013 at 5:23 PM, Harshad Sahasrabudhe <
> hsahasra at purdue.edu > wrote:
>
>
>
>
>
>
> Hi,
>
> I'm trying the write the package compiler for MAGMA using PETSc build
> system. I'm getting the following error while building MAGMA. With the
> error, I'm also getting a couple hundred warnings:
>
> sormqr_gpu_2stage.cpp: In function ‘magma_int_t
> magma_sormqr_gpu_2stages(char, char, magma_int_t, magma_int_t, magma_int_t,
> float*, magma_int_t, float*, magma_int_t, float*, magma_int_t,
> magma_int_t*)’:
> sormqr_gpu_2stage.cpp:98: warning: unused variable ‘c_one’
> sormqr_gpu_2stage.cpp:107: warning: unused variable ‘lwkopt’
> strsm_m.cpp: In function ‘magma_int_t magma_strsm_m(magma_int_t, char,
> char, char, char, magma_int_t, magma_int_t, float, float*, magma_int_t,
> float*, magma_int_t)’:
> strsm_m.cpp:181: warning: unused variable ‘jj’
> strsm_m.cpp:181: warning: unused variable ‘jjb’
> sgeev.cpp: In function ‘magma_int_t magma_sgeev(char, char, magma_int_t,
> float*, magma_int_t, float*, float*, float*, magma_int_t, float*,
> magma_int_t, float*, magma_int_t, magma_int_t*)’:
> sgeev.cpp:126: warning: unused variable ‘c_n1’
> nvcc fatal : redefinition of argument 'gpu-architecture'
>
>
> What is the easiest way to debug this kind of an error?
>
>
>
> 1) Make the MAGMA build system print out the full compile line
>
>
> 2) Make the MAGMA people clean up their sloppy code, which would eliminate
> the warnings
>
>
> Matt
>
>
>
>
> Thanks,
> Harshad
>
>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>



-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
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