This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by PnetCDF configure 1.11.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./../pnetcdf-1.11.2/configure --prefix=/Users/LauraLaptop/InstalledSoftwares/pnetcdf-1.11.2.gfortran-8.3 --enable-shared --enable-large-file-test ## --------- ## ## Platform. ## ## --------- ## hostname = Lauras-MacBook-Pro.local uname -m = x86_64 uname -r = 18.7.0 uname -s = Darwin uname -v = Darwin Kernel Version 18.7.0: Tue Aug 20 16:57:14 PDT 2019; root:xnu-4903.271.2~2/RELEASE_X86_64 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 18.7.0: Tue Aug 20 16:57:14 PDT 2019; root:xnu-4903.271.2~2/RELEASE_X86_64 Kernel configured for up to 4 processors. 2 processors are physically available. 4 processors are logically available. Processor type: x86_64h (Intel x86-64h Haswell) Processors active: 0 1 2 3 Primary memory available: 16.00 gigabytes Default processor set: 276 tasks, 943 threads, 4 processors Load average: 0.70, Mach factor: 3.29 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/sbin PATH: /sbin PATH: /opt/X11/bin ## ----------- ## ## Core tests. ## ## ----------- ## ------------------------------- User environment variables: ------------------------------- TERM_PROGRAM=Apple_Terminal HOST=Lauras-MacBook-Pro.local SHELL=/bin/sh TERM=xterm-256color TMPDIR=/var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T/ Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.AmcGWggsbF/Render TERM_PROGRAM_VERSION=421.2 TERM_SESSION_ID=22BC56FB-B2E9-4051-991D-5B6B59B4F473 DUALCASE=1 LC_ALL=C GROUP=staff USER=LauraLaptop HOSTTYPE=unknown SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.nMhj7dKFnT/Listeners PATH=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin PWD=/Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install LANG=en_US.UTF-8 XPC_FLAGS=0x0 F77=mpif77 CXX=mpic++ XPC_SERVICE_NAME=0 SHLVL=2 HOME=/Users/LauraLaptop LANGUAGE=C OSTYPE=darwin FC=mpif90 VENDOR=apple MACHTYPE=x86_64 LOGNAME=LauraLaptop as_nl= CC=mpicc DISPLAY=/private/tmp/com.apple.launchd.WLSNvLtVcl/org.macosforge.xquartz:0 _=/usr/bin/env ------------------------------- configure:3278: checking for a BSD-compatible install configure:3346: result: /usr/bin/install -c configure:3357: checking whether build environment is sane configure:3412: result: yes configure:3563: checking for a thread-safe mkdir -p configure:3602: result: ./../pnetcdf-1.11.2/./scripts/install-sh -c -d configure:3609: checking for gawk configure:3639: result: no configure:3609: checking for mawk configure:3639: result: no configure:3609: checking for nawk configure:3639: result: no configure:3609: checking for awk configure:3625: found /usr/bin/awk configure:3636: result: awk configure:3647: checking whether make sets $(MAKE) configure:3669: result: yes configure:3698: checking whether make supports nested variables configure:3715: result: yes configure:3852: checking whether make supports nested variables configure:3869: result: yes configure:3882: checking whether to enable maintainer-specific portions of Makefiles configure:3891: result: yes configure:4421: checking for mpicc configure:4439: found /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc configure:4451: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc configure:4542: checking for gcc configure:4569: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc configure:4798: checking for C compiler version configure:4807: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc --version >&5 gcc (GCC) 8.3.0 Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4818: $? = 0 configure:4807: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -v >&5 mpicc for MPICH version 3.3.1 Using built-in specs. COLLECT_GCC=/usr/local/bin/gcc COLLECT_LTO_WRAPPER=/usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/lto-wrapper Target: x86_64-apple-darwin18.5.0 Configured with: ../gcc-8.3.0/configure --enable-checking=release --enable-languages=c,c++,fortran Thread model: posix gcc version 8.3.0 (GCC) configure:4818: $? = 0 configure:4807: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -V >&5 gcc: error: unrecognized command line option '-V' configure:4818: $? = 1 configure:4807: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -qversion >&5 gcc: error: unrecognized command line option '-qversion'; did you mean '--version'? configure:4818: $? = 1 configure:4838: checking whether the C compiler works configure:4860: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc conftest.c >&5 configure:4864: $? = 0 configure:4912: result: yes configure:4915: checking for C compiler default output file name configure:4917: result: a.out configure:4923: checking for suffix of executables configure:4930: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest conftest.c >&5 configure:4934: $? = 0 configure:4956: result: configure:4978: checking whether we are cross compiling configure:4986: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest conftest.c >&5 configure:4990: $? = 0 configure:4997: ./conftest configure:5001: $? = 0 configure:5016: result: no configure:5021: checking for suffix of object files configure:5043: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c conftest.c >&5 configure:5047: $? = 0 configure:5068: result: o configure:5072: checking whether we are using the GNU C compiler configure:5091: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c conftest.c >&5 configure:5091: $? = 0 configure:5100: result: yes configure:5109: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc accepts -g configure:5129: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g conftest.c >&5 configure:5129: $? = 0 configure:5170: result: yes configure:5187: checking for /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc option to accept ISO C89 configure:5250: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:5250: $? = 0 configure:5263: result: none needed configure:5288: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc understands -c and -o together configure:5310: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c conftest.c -o conftest2.o configure:5313: $? = 0 configure:5310: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c conftest.c -o conftest2.o configure:5313: $? = 0 configure:5325: result: yes configure:5353: checking for style of include used by make configure:5381: result: GNU configure:5407: checking dependency style of /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc configure:5518: result: gcc3 configure:5539: checking how to run the C preprocessor configure:5570: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E conftest.c configure:5570: $? = 0 configure:5584: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:5584: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | /* end confdefs.h. */ | #include configure:5609: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E configure:5629: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E conftest.c configure:5629: $? = 0 configure:5643: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:5643: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | /* end confdefs.h. */ | #include configure:5681: checking for special C compiler options needed for large files configure:5726: result: no configure:5732: checking for _FILE_OFFSET_BITS value needed for large files configure:5757: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:5757: $? = 0 configure:5789: result: no configure:5877: checking if C compiler is IBM XLC configure:5893: result: no configure:5906: checking if C compiler is pgcc configure:5921: result: no configure:5934: checking if C compiler is Fujitsu fccpx configure:5947: result: no configure:5960: checking for MPI_Comm_rank configure:5960: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:5960: $? = 0 configure:5960: result: yes configure:6032: checking for MPI_File_open configure:6032: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:6032: $? = 0 configure:6032: result: yes configure:6106: checking build system type configure:6120: result: x86_64-apple-darwin18.7.0 configure:6140: checking host system type configure:6153: result: x86_64-apple-darwin18.7.0 configure:6223: checking for ar configure:6239: found /usr/bin/ar configure:6250: result: ar configure:6276: checking the archiver (ar) interface configure:6292: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:6292: $? = 0 configure:6294: ar cru libconftest.a conftest.o >&5 configure:6297: $? = 0 configure:6325: result: ar configure:6393: checking how to print strings configure:6420: result: printf configure:6441: checking for a sed that does not truncate output configure:6505: result: /usr/bin/sed configure:6523: checking for grep that handles long lines and -e configure:6581: result: /usr/bin/grep configure:6586: checking for egrep configure:6648: result: /usr/bin/grep -E configure:6653: checking for fgrep configure:6715: result: /usr/bin/grep -F configure:6829: checking for ld used by /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc configure:6896: result: /usr/bin/ld configure:6903: checking if the linker (/usr/bin/ld) is GNU ld configure:6918: result: no configure:6930: checking for BSD- or MS-compatible name lister (nm) configure:6984: result: /usr/bin/nm -B configure:7114: checking the name lister (/usr/bin/nm -B) interface configure:7121: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:7124: /usr/bin/nm -B "conftest.o" configure:7127: output 00000000000001b0 S _some_variable configure:7134: result: BSD nm configure:7137: checking whether ln -s works configure:7141: result: yes configure:7149: checking the maximum length of command line arguments configure:7280: result: 196608 configure:7328: checking how to convert x86_64-apple-darwin18.7.0 file names to x86_64-apple-darwin18.7.0 format configure:7368: result: func_convert_file_noop configure:7375: checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain format configure:7395: result: func_convert_file_noop configure:7402: checking for /usr/bin/ld option to reload object files configure:7409: result: -r configure:7483: checking for objdump configure:7499: found /usr/bin/objdump configure:7510: result: objdump configure:7542: checking how to recognize dependent libraries configure:7742: result: pass_all configure:7827: checking for dlltool configure:7857: result: no configure:7887: checking how to associate runtime and link libraries configure:7914: result: printf %s\n configure:8038: checking for archiver @FILE support configure:8055: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:8055: $? = 0 configure:8058: ar cru libconftest.a @conftest.lst >&5 ar: @conftest.lst: No such file or directory configure:8061: $? = 1 configure:8081: result: no configure:8139: checking for strip configure:8155: found /usr/bin/strip configure:8166: result: strip configure:8238: checking for ranlib configure:8254: found /usr/bin/ranlib configure:8265: result: ranlib configure:8367: checking command to parse /usr/bin/nm -B output from /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc object configure:8520: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:8523: $? = 0 configure:8527: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8530: $? = 0 cannot find nm_test_var in conftest.nm configure:8520: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:8523: $? = 0 configure:8527: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8530: $? = 0 configure:8596: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c conftstm.o >&5 warning: (x86_64) could not find object file symbol for symbol _main configure:8599: $? = 0 configure:8637: result: ok configure:8684: checking for sysroot configure:8714: result: no configure:8721: checking for a working dd configure:8759: result: /bin/dd configure:8763: checking how to truncate binary pipes configure:8778: result: /bin/dd bs=4096 count=1 configure:9092: checking for mt configure:9122: result: no configure:9142: checking if : is a manifest tool configure:9148: : '-?' configure:9156: result: no configure:9212: checking for dsymutil configure:9228: found /usr/bin/dsymutil configure:9239: result: dsymutil configure:9304: checking for nmedit configure:9320: found /usr/bin/nmedit configure:9331: result: nmedit configure:9396: checking for lipo configure:9412: found /usr/bin/lipo configure:9423: result: lipo configure:9488: checking for otool configure:9504: found /usr/bin/otool configure:9515: result: otool configure:9580: checking for otool64 configure:9610: result: no configure:9655: checking for -single_module linker flag /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c configure:9688: result: yes configure:9691: checking for -exported_symbols_list linker flag configure:9711: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 -Wl,-exported_symbols_list,conftest.sym conftest.c >&5 configure:9711: $? = 0 configure:9721: result: yes configure:9724: checking for -force_load linker flag /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -g -O2 -c -o conftest.o conftest.c ar cru libconftest.a conftest.o ranlib libconftest.a /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a configure:9756: result: yes configure:9829: checking for ANSI C header files configure:9849: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9849: $? = 0 configure:9922: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:9922: $? = 0 configure:9922: ./conftest configure:9922: $? = 0 configure:9933: result: yes configure:9946: checking for sys/types.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for sys/stat.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for stdlib.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for string.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for memory.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for strings.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for inttypes.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for stdint.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9946: checking for unistd.h configure:9946: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9946: $? = 0 configure:9946: result: yes configure:9960: checking for dlfcn.h configure:9960: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:9960: $? = 0 configure:9960: result: yes configure:10215: checking for objdir configure:10230: result: .libs configure:10494: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc supports -fno-rtti -fno-exceptions configure:10512: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:10516: $? = 0 configure:10529: result: no configure:10903: checking for /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc option to produce PIC configure:10910: result: -fno-common -DPIC configure:10918: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc PIC flag -fno-common -DPIC works configure:10936: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5 configure:10940: $? = 0 configure:10953: result: yes configure:10982: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc static flag -static works configure:11010: result: no configure:11025: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc supports -c -o file.o configure:11046: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:11050: $? = 0 configure:11072: result: yes configure:11080: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc supports -c -o file.o configure:11127: result: yes configure:11160: checking whether the /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc linker (/usr/bin/ld) supports shared libraries configure:12422: result: yes configure:12662: checking dynamic linker characteristics configure:13483: result: darwin18.7.0 dyld configure:13605: checking how to hardcode library paths into programs configure:13630: result: immediate configure:14178: checking whether stripping libraries is possible configure:14192: result: yes configure:14218: checking if libtool supports shared libraries configure:14220: result: yes configure:14223: checking whether to build shared libraries configure:14248: result: yes configure:14251: checking whether to build static libraries configure:14255: result: yes configure:14604: checking for mpic++ configure:14622: found /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ configure:14634: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ configure:14812: checking for C++ compiler version configure:14821: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ --version >&5 g++ (GCC) 8.3.0 Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:14832: $? = 0 configure:14821: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -v >&5 mpicxx for MPICH version 3.3.1 Using built-in specs. COLLECT_GCC=/usr/local/bin/g++ COLLECT_LTO_WRAPPER=/usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/lto-wrapper Target: x86_64-apple-darwin18.5.0 Configured with: ../gcc-8.3.0/configure --enable-checking=release --enable-languages=c,c++,fortran Thread model: posix gcc version 8.3.0 (GCC) configure:14832: $? = 0 configure:14821: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -V >&5 g++: error: unrecognized command line option '-V' configure:14832: $? = 1 configure:14821: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -qversion >&5 g++: error: unrecognized command line option '-qversion'; did you mean '--version'? configure:14832: $? = 1 configure:14836: checking whether we are using the GNU C++ compiler configure:14855: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c conftest.cpp >&5 configure:14855: $? = 0 configure:14864: result: yes configure:14873: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ accepts -g configure:14893: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g conftest.cpp >&5 configure:14893: $? = 0 configure:14934: result: yes configure:14959: checking dependency style of /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ configure:15070: result: gcc3 configure:15103: checking how to run the C++ preprocessor configure:15130: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E conftest.cpp configure:15130: $? = 0 configure:15144: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E conftest.cpp conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:15144: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:15169: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E configure:15189: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E conftest.cpp configure:15189: $? = 0 configure:15203: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E conftest.cpp conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:15203: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:15379: checking for ld used by /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ configure:15446: result: /usr/bin/ld configure:15453: checking if the linker (/usr/bin/ld) is GNU ld configure:15468: result: no configure:15528: checking whether the /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ linker (/usr/bin/ld) supports shared libraries configure:16604: result: yes configure:16640: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 conftest.cpp >&5 configure:16643: $? = 0 configure:17147: checking for /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ option to produce PIC configure:17154: result: -fno-common -DPIC configure:17162: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ PIC flag -fno-common -DPIC works configure:17180: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5 configure:17184: $? = 0 configure:17197: result: yes configure:17220: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ static flag -static works configure:17248: result: no configure:17260: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ supports -c -o file.o configure:17281: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 configure:17285: $? = 0 configure:17307: result: yes configure:17312: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ supports -c -o file.o configure:17359: result: yes configure:17389: checking whether the /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ linker (/usr/bin/ld) supports shared libraries configure:17429: result: yes configure:17570: checking dynamic linker characteristics configure:18315: result: darwin18.7.0 dyld configure:18380: checking how to hardcode library paths into programs configure:18405: result: immediate configure:18454: checking for MPI_File_close configure:18454: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -o conftest -g -O2 conftest.cpp >&5 configure:18454: $? = 0 configure:18454: result: yes configure:18544: checking whether MPI C++ compiler redefines SEEK_SET configure:18561: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 conftest.cpp >&5 configure:18561: $? = 0 configure:18568: result: no configure:18938: checking for mpif90 configure:18956: found /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:18968: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:19318: checking for mpif90 configure:19336: found /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:19348: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:19528: checking for Fortran 77 compiler version configure:19537: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 --version >&5 GNU Fortran (GCC) 8.3.0 Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:19548: $? = 0 configure:19537: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -v >&5 mpifort for MPICH version 3.3.1 Using built-in specs. COLLECT_GCC=/usr/local/bin/gfortran COLLECT_LTO_WRAPPER=/usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/lto-wrapper Target: x86_64-apple-darwin18.5.0 Configured with: ../gcc-8.3.0/configure --enable-checking=release --enable-languages=c,c++,fortran Thread model: posix gcc version 8.3.0 (GCC) configure:19548: $? = 0 configure:19537: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' configure:19548: $? = 1 configure:19537: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? configure:19548: $? = 1 configure:19557: checking whether we are using the GNU Fortran 77 compiler configure:19570: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c conftest.F >&5 configure:19570: $? = 0 configure:19579: result: yes configure:19585: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 accepts -g configure:19596: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g conftest.f >&5 configure:19596: $? = 0 configure:19604: result: yes configure:19733: checking if libtool supports shared libraries configure:19735: result: yes configure:19738: checking whether to build shared libraries configure:19762: result: yes configure:19765: checking whether to build static libraries configure:19769: result: yes configure:20137: checking for /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 option to produce PIC configure:20144: result: -fno-common configure:20152: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 PIC flag -fno-common works configure:20170: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -fno-common conftest.f >&5 configure:20174: $? = 0 configure:20187: result: yes configure:20210: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 static flag -static works configure:20238: result: no configure:20250: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 supports -c -o file.o configure:20271: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:20275: $? = 0 configure:20297: result: yes configure:20302: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 supports -c -o file.o configure:20349: result: yes configure:20379: checking whether the /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 linker (/usr/bin/ld) supports shared libraries configure:21591: result: yes configure:21732: checking dynamic linker characteristics configure:22471: result: darwin18.7.0 dyld configure:22536: checking how to hardcode library paths into programs configure:22561: result: immediate configure:22598: checking how to get verbose linking output from /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:22608: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:22608: $? = 0 configure:22626: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 -v conftest.f mpifort for MPICH version 3.3.1 Using built-in specs. Target: x86_64-apple-darwin18.5.0 Thread model: posix gcc version 8.3.0 (GCC) /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/f951 conftest.f -ffixed-form -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.14.0 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/finclude -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccemfFla.s GNU Fortran (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -v -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -force_cpusubtype_ALL -mmacosx-version-min=10.14 -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccNsdkJf.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccemfFla.s Apple clang version 11.0.0 (clang-1100.0.33.8) Target: x86_64-apple-darwin18.7.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1as -triple x86_64-apple-macosx10.14.0 -filetype obj -main-file-name ccemfFla.s -target-cpu penryn -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fdebug-compilation-dir /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install -dwarf-debug-producer Apple clang version 11.0.0 (clang-1100.0.33.8) -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -dwarf-version=4 -mrelocation-model pic -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccNsdkJf.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccemfFla.s Reading specs from /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccNsdkJf.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 8.3.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccNsdkJf.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-512.4 BUILD 05:06:53 Aug 16 2019 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 /usr/local/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ /usr/bin/nm -n /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccNsdkJf.o dsymutil conftest configure:22709: result: -v configure:22711: checking for Fortran 77 libraries of /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:22734: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 -v conftest.f mpifort for MPICH version 3.3.1 Using built-in specs. Target: x86_64-apple-darwin18.5.0 Thread model: posix gcc version 8.3.0 (GCC) /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/f951 conftest.f -ffixed-form -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.14.0 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/finclude -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cckJNq9W.s GNU Fortran (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -v -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -force_cpusubtype_ALL -mmacosx-version-min=10.14 -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cc3DXdo4.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cckJNq9W.s Apple clang version 11.0.0 (clang-1100.0.33.8) Target: x86_64-apple-darwin18.7.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1as -triple x86_64-apple-macosx10.14.0 -filetype obj -main-file-name cckJNq9W.s -target-cpu penryn -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fdebug-compilation-dir /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install -dwarf-debug-producer Apple clang version 11.0.0 (clang-1100.0.33.8) -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -dwarf-version=4 -mrelocation-model pic -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cc3DXdo4.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cckJNq9W.s Reading specs from /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cc3DXdo4.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 8.3.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cc3DXdo4.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-512.4 BUILD 05:06:53 Aug 16 2019 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 /usr/local/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ /usr/bin/nm -n /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//cc3DXdo4.o dsymutil conftest configure:22930: result: -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm configure:22942: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 is a valid MPI compiler configure:22957: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:22957: $? = 0 configure:22969: result: yes configure:23106: checking for Fortran compiler version configure:23115: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 --version >&5 GNU Fortran (GCC) 8.3.0 Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:23126: $? = 0 configure:23115: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -v >&5 mpifort for MPICH version 3.3.1 Using built-in specs. COLLECT_GCC=/usr/local/bin/gfortran COLLECT_LTO_WRAPPER=/usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/lto-wrapper Target: x86_64-apple-darwin18.5.0 Configured with: ../gcc-8.3.0/configure --enable-checking=release --enable-languages=c,c++,fortran Thread model: posix gcc version 8.3.0 (GCC) configure:23126: $? = 0 configure:23115: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' configure:23126: $? = 1 configure:23115: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? configure:23126: $? = 1 configure:23135: checking whether we are using the GNU Fortran compiler configure:23148: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c conftest.F >&5 configure:23148: $? = 0 configure:23157: result: yes configure:23163: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 accepts -g configure:23174: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g conftest.f >&5 configure:23174: $? = 0 configure:23182: result: yes configure:23314: checking if libtool supports shared libraries configure:23316: result: yes configure:23319: checking whether to build shared libraries configure:23343: result: yes configure:23346: checking whether to build static libraries configure:23350: result: yes configure:23384: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:23387: $? = 0 configure:23872: checking for /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 option to produce PIC configure:23879: result: -fno-common configure:23887: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 PIC flag -fno-common works configure:23905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -fno-common conftest.f >&5 configure:23909: $? = 0 configure:23922: result: yes configure:23945: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 static flag -static works configure:23973: result: no configure:23985: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 supports -c -o file.o configure:24006: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:24010: $? = 0 configure:24032: result: yes configure:24037: checking if /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 supports -c -o file.o configure:24084: result: yes configure:24114: checking whether the /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 linker (/usr/bin/ld) supports shared libraries configure:25326: result: yes configure:25467: checking dynamic linker characteristics configure:26206: result: darwin18.7.0 dyld configure:26271: checking how to hardcode library paths into programs configure:26296: result: immediate configure:26334: checking how to get verbose linking output from /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:26344: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:26344: $? = 0 configure:26362: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 -v conftest.f mpifort for MPICH version 3.3.1 Using built-in specs. Target: x86_64-apple-darwin18.5.0 Thread model: posix gcc version 8.3.0 (GCC) /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/f951 conftest.f -ffixed-form -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.14.0 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/finclude -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccHLxoGk.s GNU Fortran (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -v -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -force_cpusubtype_ALL -mmacosx-version-min=10.14 -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccVwYGVI.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccHLxoGk.s Apple clang version 11.0.0 (clang-1100.0.33.8) Target: x86_64-apple-darwin18.7.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1as -triple x86_64-apple-macosx10.14.0 -filetype obj -main-file-name ccHLxoGk.s -target-cpu penryn -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fdebug-compilation-dir /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install -dwarf-debug-producer Apple clang version 11.0.0 (clang-1100.0.33.8) -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -dwarf-version=4 -mrelocation-model pic -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccVwYGVI.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccHLxoGk.s Reading specs from /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccVwYGVI.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 8.3.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccVwYGVI.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-512.4 BUILD 05:06:53 Aug 16 2019 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 /usr/local/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ /usr/bin/nm -n /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccVwYGVI.o dsymutil conftest configure:26445: result: -v configure:26447: checking for Fortran libraries of /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 configure:26470: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 -v conftest.f mpifort for MPICH version 3.3.1 Using built-in specs. Target: x86_64-apple-darwin18.5.0 Thread model: posix gcc version 8.3.0 (GCC) /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/f951 conftest.f -ffixed-form -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.14.0 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/finclude -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccAgmtcR.s GNU Fortran (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.3.0 (x86_64-apple-darwin18.5.0) compiled by GNU C version 8.3.0, GMP version 6.0.0, MPFR version 3.1.2-p10, MPC version 1.0.2, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -v -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -force_cpusubtype_ALL -mmacosx-version-min=10.14 -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccdFqrn6.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccAgmtcR.s Apple clang version 11.0.0 (clang-1100.0.33.8) Target: x86_64-apple-darwin18.7.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1as -triple x86_64-apple-macosx10.14.0 -filetype obj -main-file-name ccAgmtcR.s -target-cpu penryn -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -fdebug-compilation-dir /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install -dwarf-debug-producer Apple clang version 11.0.0 (clang-1100.0.33.8) -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -I /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/include -dwarf-version=4 -mrelocation-model pic -o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccdFqrn6.o /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccAgmtcR.s Reading specs from /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/libexec/gcc/x86_64-apple-darwin18.5.0/8.3.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccdFqrn6.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 8.3.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.14.0 -weak_reference_mismatches non-weak -o conftest -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -flat_namespace -commons use_dylibs /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccdFqrn6.o -lmpifort -lmpi -lpmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-512.4 BUILD 05:06:53 Aug 16 2019 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib /usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 /usr/local/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ /usr/bin/nm -n /var/folders/07/kq4nvl813vx7ddq2lf0j8smh0000gn/T//ccdFqrn6.o dsymutil conftest configure:26666: result: -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm configure:26679: checking whether mpi.mod is available configure:26691: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:26691: $? = 0 configure:26698: result: yes configure:26700: checking whether /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 is a valid MPI compiler configure:26711: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:26711: $? = 0 configure:26743: result: yes configure:26808: checking for Fortran flag needed to accept free-form source configure:26827: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 conftest.f:2:3: program freeform 1 Error: Non-numeric character in statement label at (1) conftest.f:2:3: program freeform 1 Error: Unclassifiable statement at (1) conftest.f:4:26: print *, 'Hello ', & 1 Error: Expected expression in PRINT statement at (1) conftest.f:5:11: 'world.' 1 Error: Invalid character in name at (1) configure:26827: $? = 1 configure: failed program was: | | program freeform | ! FIXME: how to best confuse non-freeform compilers? | print *, 'Hello ', & | 'world.' | end configure:26827: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -ffree-form conftest.f >&5 configure:26827: $? = 0 configure:26836: result: -ffree-form configure:26880: checking for Fortran flag to compile preprocessed .F files configure:26905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F >&5 configure:26905: $? = 0 configure:26915: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F >&5 conftest.F:5:2: choke me 1 ~~~~~~~~ Fatal Error: ac_nonexistent.h: No such file or directory compilation terminated. configure:26915: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:26928: result: none configure:26953: checking for Fortran flag to compile preprocessed .F90 files configure:26978: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:26978: $? = 0 configure:26988: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 conftest.F90:5:2: choke me 1 ~~~~~~~~ Fatal Error: ac_nonexistent.h: No such file or directory compilation terminated. configure:26988: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:27001: result: none configure:27032: checking for Fortran flag to compile preprocessed .F files configure:27080: result: none configure:27101: checking how to define symbols for preprocessed Fortran configure:27123: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -DFOOBAR -DZORK=42 conftest.F >&5 configure:27123: $? = 0 configure:27132: result: -D configure:27153: checking for Fortran flag to compile .f files configure:27173: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:27173: $? = 0 configure:27182: result: none configure:27208: checking for Fortran flag to compile .F files configure:27228: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F >&5 configure:27228: $? = 0 configure:27237: result: none configure:27263: checking for Fortran flag to compile .f90 files configure:27283: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f90 >&5 configure:27283: $? = 0 configure:27292: result: none configure:27318: checking for Fortran flag to compile .F90 files configure:27338: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:27338: $? = 0 configure:27347: result: none configure:27374: checking for Fortran flag needed to accept fixed-form source configure:27391: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 conftest.F90:2:0: C This comment should confuse free-form compilers. Error: Unclassifiable statement at (1) configure:27391: $? = 1 configure: failed program was: | | C This comment should confuse free-form compilers. | program main | end configure:27391: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -ffixed-form conftest.F90 >&5 configure:27391: $? = 0 configure:27400: result: -ffixed-form configure:27432: checking for dummy main to link with Fortran libraries configure:27466: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm >&5 configure:27466: $? = 0 configure:27511: result: none configure:27544: checking for Fortran name-mangling scheme configure:27557: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:27557: $? = 0 configure:27598: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm >&5 Undefined symbols for architecture x86_64: "_foobar", referenced from: _main in ccBxj1Ud.o (maybe you meant: _foobar_) ld: symbol(s) not found for architecture x86_64 collect2: error: ld returned 1 exit status configure:27598: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:27598: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm >&5 configure:27598: $? = 0 configure:27656: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm >&5 configure:27656: $? = 0 configure:27698: result: lower case, underscore, no extra underscore configure:27734: checking for C-equivalent to Fortran routine "SUB_A" configure:27756: result: sub_a_ configure:27788: checking if Fortran compiler is NAG configure:27801: result: no configure:27816: checking Fortran compiler treating constant modifier configure:27835: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:27835: $? = 0 configure:27874: result: 8 configure:27922: checking Fortran 90 module extension configure:27944: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:27944: $? = 0 configure:27961: result: mod configure:27979: checking Fortran 90 module inclusion flag configure:28001: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:28001: $? = 0 configure:28015: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 -Iconftest.dir -Iconftest.dir conftest.F90 >&5 configure:28015: $? = 0 configure:28036: result: -I configure:28058: checking Fortran 90 module extension configure:28097: result: mod configure:28111: checking whether Fortran 90 compiler capitalizes .mod filenames configure:28120: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:28120: $? = 0 configure:28130: result: no configure:28152: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:784: creating libtool configure:30245: checking whether MPI library is built with shared library support configure:30273: ./libtool --mode=compile /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c -o conftest.lo >&5 libtool: compile: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c -fno-common -DPIC -o .libs/conftest.o libtool: compile: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c -o conftest.o >/dev/null 2>&1 configure:30276: $? = 0 configure:30278: ./libtool --mode=link /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -rpath /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install -g -O2 -o libconftest.la conftest.lo >&5 libtool: link: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libconftest.0.dylib .libs/conftest.o -g -O2 -install_name /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2.install/libconftest.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "libconftest.dylib" && ln -s "libconftest.0.dylib" "libconftest.dylib") libtool: link: ar cru .libs/libconftest.a conftest.o libtool: link: ranlib .libs/libconftest.a libtool: link: ( cd ".libs" && rm -f "libconftest.la" && ln -s "../libconftest.la" "libconftest.la" ) configure:30281: $? = 0 configure:30284: test -s libconftest.la configure:30287: $? = 0 configure:30296: result: yes configure:30314: checking for gawk configure:30341: result: awk configure:30352: checking for egrep configure:30414: result: /usr/bin/grep -E configure:30420: checking for a sed that does not truncate output configure:30484: result: /usr/bin/sed configure:30491: checking for sed handling option -i configure:30513: result: /usr/bin/sed -i '' configure:30519: checking for grep that handles long lines and -e configure:30577: result: /usr/bin/grep configure:30590: checking for m4 configure:30606: found /usr/bin/m4 configure:30617: result: m4 configure:30674: checking m4 additional flags configure:30686: result: none needed configure:30699: checking for stdbool.h that conforms to C99 configure:30774: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:30774: $? = 0 configure:30781: result: yes configure:30783: checking for _Bool configure:30783: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:30783: $? = 0 configure:30783: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:68:20: error: expected expression before ')' token if (sizeof ((_Bool))) ^ configure:30783: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:30783: result: yes configure:30801: checking for inline configure:30817: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:30817: $? = 0 configure:30825: result: inline configure:30846: checking for IEEE floating point format configure:30884: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30884: $? = 0 configure:30884: ./conftest configure:30884: $? = 0 configure:30893: result: yes configure:30905: checking for strdup configure:30905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 conftest.c:49:6: warning: conflicting types for built-in function 'strdup' [-Wbuiltin-declaration-mismatch] char strdup (); ^~~~~~ configure:30905: $? = 0 configure:30905: result: yes configure:30905: checking for strerror configure:30905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30905: $? = 0 configure:30905: result: yes configure:30905: checking for access configure:30905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30905: $? = 0 configure:30905: result: yes configure:30905: checking for unlink configure:30905: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30905: $? = 0 configure:30905: result: yes configure:30926: checking search.h usability configure:30926: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:30926: $? = 0 configure:30926: result: yes configure:30926: checking search.h presence configure:30926: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E conftest.c configure:30926: $? = 0 configure:30926: result: yes configure:30926: checking for search.h configure:30926: result: yes configure:30939: checking for tsearch configure:30939: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30939: $? = 0 configure:30939: result: yes configure:30939: checking for tdelete configure:30939: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30939: $? = 0 configure:30939: result: yes configure:30967: checking for MPI_Offset configure:30967: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:30967: $? = 0 configure:30967: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:46:25: error: expected expression before ')' token if (sizeof ((MPI_Offset))) ^ configure:30967: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | /* end confdefs.h. */ | #include | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((MPI_Offset))) | return 0; | ; | return 0; | } configure:30967: result: yes configure:30978: checking size of MPI_Offset configure:30983: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:30983: $? = 0 configure:30983: ./conftest configure:30983: $? = 0 configure:30998: result: 8 configure:31024: checking size of MPI_Aint configure:31029: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31029: $? = 0 configure:31029: ./conftest configure:31029: $? = 0 configure:31044: result: 8 configure:31093: checking for MPI_Get_address configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_create_subarray configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_create_hvector configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_create_hindexed configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_create_struct configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_create_resized configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31093: checking for MPI_Type_get_extent configure:31093: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:31093: $? = 0 configure:31093: result: yes configure:31103: checking whether MPI_COMBINER_DUP is declared configure:31103: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31103: $? = 0 configure:31103: result: yes configure:31114: checking whether MPI_COMBINER_HVECTOR_INTEGER is declared configure:31114: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31114: $? = 0 configure:31114: result: yes configure:31125: checking whether MPI_COMBINER_HINDEXED_INTEGER is declared configure:31125: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31125: $? = 0 configure:31125: result: yes configure:31136: checking whether MPI_COMBINER_SUBARRAY is declared configure:31136: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31136: $? = 0 configure:31136: result: yes configure:31147: checking whether MPI_COMBINER_DARRAY is declared configure:31147: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31147: $? = 0 configure:31147: result: yes configure:31158: checking whether MPI_COMBINER_RESIZED is declared configure:31158: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31158: $? = 0 configure:31158: result: yes configure:31169: checking whether MPI_COMBINER_STRUCT_INTEGER is declared configure:31169: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31169: $? = 0 configure:31169: result: yes configure:31180: checking whether MPI_COMBINER_INDEXED_BLOCK is declared configure:31180: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31180: $? = 0 configure:31180: result: yes configure:31191: checking whether MPI_COMBINER_F90_REAL is declared configure:31191: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31191: $? = 0 configure:31191: result: yes configure:31202: checking whether MPI_COMBINER_F90_INTEGER is declared configure:31202: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31202: $? = 0 configure:31202: result: yes configure:31213: checking whether MPI_COMBINER_F90_COMPLEX is declared configure:31213: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31213: $? = 0 configure:31213: result: yes configure:31226: checking whether MPI_ERR_FILE_EXISTS is declared configure:31226: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31226: $? = 0 configure:31226: result: yes configure:31237: checking whether MPI_ERR_NO_SUCH_FILE is declared configure:31237: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31237: $? = 0 configure:31237: result: yes configure:31248: checking whether MPI_ERR_AMODE is declared configure:31248: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31248: $? = 0 configure:31248: result: yes configure:31259: checking whether MPI_ERR_NOT_SAME is declared configure:31259: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31259: $? = 0 configure:31259: result: yes configure:31270: checking whether MPI_ERR_BAD_FILE is declared configure:31270: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31270: $? = 0 configure:31270: result: yes configure:31281: checking whether MPI_ERR_READ_ONLY is declared configure:31281: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31281: $? = 0 configure:31281: result: yes configure:31292: checking whether MPI_ERR_ACCESS is declared configure:31292: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31292: $? = 0 configure:31292: result: yes configure:31303: checking whether MPI_ERR_NO_SPACE is declared configure:31303: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31303: $? = 0 configure:31303: result: yes configure:31314: checking whether MPI_ERR_QUOTA is declared configure:31314: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31314: $? = 0 configure:31314: result: yes configure:31329: checking whether MPI datatype MPI_OFFSET is defined configure:31338: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31338: $? = 0 configure:31345: result: yes configure:31364: checking whether MPI datatype MPI_INTEGER8 is defined configure:31373: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31373: $? = 0 configure:31380: result: yes configure:31388: checking whether MPI datatype MPI_CHARACTER is defined configure:31397: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31397: $? = 0 configure:31404: result: yes configure:31412: checking whether MPI datatype MPI_REAL is defined configure:31421: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31421: $? = 0 configure:31428: result: yes configure:31436: checking whether MPI datatype MPI_INTEGER is defined configure:31445: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31445: $? = 0 configure:31452: result: yes configure:31460: checking whether MPI datatype MPI_DOUBLE_PRECISION is defined configure:31469: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31469: $? = 0 configure:31476: result: yes configure:31484: checking whether MPI datatype MPI_INTEGER1 is defined configure:31493: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31493: $? = 0 configure:31500: result: yes configure:31508: checking whether MPI datatype MPI_INTEGER2 is defined configure:31517: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31517: $? = 0 configure:31524: result: yes configure:31532: checking whether MPI datatype MPI_INTEGER4 is defined configure:31541: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31541: $? = 0 configure:31548: result: yes configure:31556: checking whether MPI datatype MPI_REAL2 is defined configure:31565: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c:74:32: error: 'MPI_REAL2' undeclared here (not in a function); did you mean 'MPI_REAL8'? MPI_Datatype dummy = MPI_REAL2; ^~~~~~~~~ MPI_REAL8 configure:31565: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | /* end confdefs.h. */ | | #include | MPI_Datatype dummy = MPI_REAL2; | configure:31572: result: no configure:31580: checking whether MPI datatype MPI_REAL4 is defined configure:31589: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31589: $? = 0 configure:31596: result: yes configure:31604: checking whether MPI datatype MPI_REAL8 is defined configure:31613: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31613: $? = 0 configure:31620: result: yes configure:31629: checking whether char is unsigned configure:31656: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31656: $? = 0 configure:31663: result: no configure:31670: checking whether byte ordering is bigendian configure:31685: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31685: $? = 0 configure:31738: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31738: $? = 0 configure:31764: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:89:4: error: unknown type name 'not'; did you mean 'ino_t'? not big endian ^~~ ino_t conftest.c:89:12: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian' not big endian ^~~~~~ configure:31764: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | /* end confdefs.h. */ | #include | #include | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:31924: result: no configure:31986: checking for size_t configure:31986: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31986: $? = 0 configure:31986: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:118:21: error: expected expression before ')' token if (sizeof ((size_t))) ^ configure:31986: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:31986: result: yes configure:31997: checking for off_t configure:31997: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:31997: $? = 0 configure:31997: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:118:20: error: expected expression before ')' token if (sizeof ((off_t))) ^ configure:31997: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:31997: result: yes configure:32008: checking for ssize_t configure:32008: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:32008: $? = 0 configure:32008: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:118:22: error: expected expression before ')' token if (sizeof ((ssize_t))) ^ configure:32008: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:32008: result: yes configure:32020: checking for ptrdiff_t configure:32020: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:32020: $? = 0 configure:32020: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:118:24: error: expected expression before ')' token if (sizeof ((ptrdiff_t))) ^ configure:32020: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:32020: result: yes configure:32029: checking for schar configure:32029: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:119:13: error: 'schar' undeclared (first use in this function); did you mean 'char'? if (sizeof (schar)) ^~~~~ char conftest.c:119:13: note: each undeclared identifier is reported only once for each function it appears in configure:32029: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (schar)) | return 0; | ; | return 0; | } configure:32029: result: no configure:32038: checking for uchar configure:32038: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:119:13: error: 'uchar' undeclared (first use in this function); did you mean 'u_char'? if (sizeof (uchar)) ^~~~~ u_char conftest.c:119:13: note: each undeclared identifier is reported only once for each function it appears in configure:32038: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (uchar)) | return 0; | ; | return 0; | } configure:32038: result: no configure:32047: checking for ushort configure:32047: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:32047: $? = 0 configure:32047: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:119:21: error: expected expression before ')' token if (sizeof ((ushort))) ^ configure:32047: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ushort))) | return 0; | ; | return 0; | } configure:32047: result: yes configure:32056: checking for uint configure:32056: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 configure:32056: $? = 0 configure:32056: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:120:19: error: expected expression before ')' token if (sizeof ((uint))) ^ configure:32056: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((uint))) | return 0; | ; | return 0; | } configure:32056: result: yes configure:32065: checking for longlong configure:32065: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:121:13: error: 'longlong' undeclared (first use in this function); did you mean 'long int'? if (sizeof (longlong)) ^~~~~~~~ long int conftest.c:121:13: note: each undeclared identifier is reported only once for each function it appears in configure:32065: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (longlong)) | return 0; | ; | return 0; | } configure:32065: result: no configure:32074: checking for ulonglong configure:32074: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:121:13: error: 'ulonglong' undeclared (first use in this function); did you mean 'u_long'? if (sizeof (ulonglong)) ^~~~~~~~~ u_long conftest.c:121:13: note: each undeclared identifier is reported only once for each function it appears in configure:32074: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (ulonglong)) | return 0; | ; | return 0; | } configure:32074: result: no configure:32083: checking for int64 configure:32083: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:121:13: error: 'int64' undeclared (first use in this function); did you mean 'int64_t'? if (sizeof (int64)) ^~~~~ int64_t conftest.c:121:13: note: each undeclared identifier is reported only once for each function it appears in configure:32083: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (int64)) | return 0; | ; | return 0; | } configure:32083: result: no configure:32092: checking for uint64 configure:32092: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:121:13: error: 'uint64' undeclared (first use in this function); did you mean 'uint64_t'? if (sizeof (uint64)) ^~~~~~ uint64_t conftest.c:121:13: note: each undeclared identifier is reported only once for each function it appears in configure:32092: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "PnetCDF" | #define PACKAGE_TARNAME "pnetcdf" | #define PACKAGE_VERSION "1.11.2" | #define PACKAGE_STRING "PnetCDF 1.11.2" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "https://parallel-netcdf.github.io" | #define PACKAGE "pnetcdf" | #define VERSION "1.11.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRDUP 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_REQ_AGGREGATION 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_DECL_MPI_COMBINER_DUP 1 | #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 | #define HAVE_DECL_MPI_COMBINER_DARRAY 1 | #define HAVE_DECL_MPI_COMBINER_RESIZED 1 | #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 | #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 | #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_DECL_MPI_ERR_AMODE 1 | #define HAVE_DECL_MPI_ERR_NOT_SAME 1 | #define HAVE_DECL_MPI_ERR_BAD_FILE 1 | #define HAVE_DECL_MPI_ERR_READ_ONLY 1 | #define HAVE_DECL_MPI_ERR_ACCESS 1 | #define HAVE_DECL_MPI_ERR_NO_SPACE 1 | #define HAVE_DECL_MPI_ERR_QUOTA 1 | #define HAVE_DECL_MPI_OFFSET 1 | #define HAVE_DECL_MPI_INTEGER8 1 | #define HAVE_DECL_MPI_CHARACTER 1 | #define HAVE_DECL_MPI_REAL 1 | #define HAVE_DECL_MPI_INTEGER 1 | #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 | #define HAVE_DECL_MPI_INTEGER1 1 | #define HAVE_DECL_MPI_INTEGER2 1 | #define HAVE_DECL_MPI_INTEGER4 1 | #define HAVE_DECL_MPI_REAL4 1 | #define HAVE_DECL_MPI_REAL8 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (uint64)) | return 0; | ; | return 0; | } configure:32092: result: no configure:32107: checking size of size_t configure:32112: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32112: $? = 0 configure:32112: ./conftest configure:32112: $? = 0 configure:32126: result: 8 configure:32140: checking size of off_t configure:32145: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32145: $? = 0 configure:32145: ./conftest configure:32145: $? = 0 configure:32159: result: 8 configure:32173: checking size of char configure:32178: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32178: $? = 0 configure:32178: ./conftest configure:32178: $? = 0 configure:32192: result: 1 configure:32206: checking size of signed char configure:32211: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32211: $? = 0 configure:32211: ./conftest configure:32211: $? = 0 configure:32225: result: 1 configure:32239: checking size of unsigned char configure:32244: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32244: $? = 0 configure:32244: ./conftest configure:32244: $? = 0 configure:32258: result: 1 configure:32272: checking size of short configure:32277: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32277: $? = 0 configure:32277: ./conftest configure:32277: $? = 0 configure:32291: result: 2 configure:32305: checking size of unsigned short int configure:32310: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32310: $? = 0 configure:32310: ./conftest configure:32310: $? = 0 configure:32324: result: 2 configure:32338: checking size of unsigned short configure:32343: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32343: $? = 0 configure:32343: ./conftest configure:32343: $? = 0 configure:32357: result: 2 configure:32371: checking size of int configure:32376: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32376: $? = 0 configure:32376: ./conftest configure:32376: $? = 0 configure:32390: result: 4 configure:32404: checking size of unsigned int configure:32409: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32409: $? = 0 configure:32409: ./conftest configure:32409: $? = 0 configure:32423: result: 4 configure:32437: checking size of long configure:32442: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32442: $? = 0 configure:32442: ./conftest configure:32442: $? = 0 configure:32456: result: 8 configure:32470: checking size of float configure:32475: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32475: $? = 0 configure:32475: ./conftest configure:32475: $? = 0 configure:32489: result: 4 configure:32503: checking size of double configure:32508: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32508: $? = 0 configure:32508: ./conftest configure:32508: $? = 0 configure:32522: result: 8 configure:32536: checking size of long long configure:32541: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32541: $? = 0 configure:32541: ./conftest configure:32541: $? = 0 configure:32555: result: 8 configure:32569: checking size of unsigned long long configure:32574: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32574: $? = 0 configure:32574: ./conftest configure:32574: $? = 0 configure:32588: result: 8 configure:32602: checking size of ptrdiff_t configure:32607: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32607: $? = 0 configure:32607: ./conftest configure:32607: $? = 0 configure:32621: result: 8 configure:32707: checking size of ushort configure:32712: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32712: $? = 0 configure:32712: ./conftest configure:32712: $? = 0 configure:32726: result: 2 configure:32742: checking size of uint configure:32747: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32747: $? = 0 configure:32747: ./conftest configure:32747: $? = 0 configure:32761: result: 4 configure:32848: checking size of MPI_Fint configure:32853: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:32853: $? = 0 configure:32853: ./conftest configure:32853: $? = 0 configure:32868: result: 4 configure:33056: checking for /usr/bin/nm configure:33083: result: /usr/bin/nm -B configure:33096: checking nm flags configure:33101: result: configure:33112: checking for C-equivalent to Fortran routine "SUB" configure:33133: result: sub_ configure:33151: checking for Fortran "integer*1" configure:33160: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:33160: $? = 0 configure:33161: result: yes configure:33190: checking for Fortran "integer*2" configure:33199: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:33199: $? = 0 configure:33200: result: yes configure:33229: checking for Fortran "integer*8" configure:33238: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:33238: $? = 0 configure:33239: result: yes configure:33273: checking if Fortran "integer*1" is configure:33283: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33286: $? = 0 configure:33289: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33292: $? = 0 configure:33295: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33298: $? = 0 configure:33301: ./conftest configure:33304: $? = 0 configure:33306: result: "signed char" in C configure:33348: checking if Fortran "integer*2" is configure:33358: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33361: $? = 0 configure:33364: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33367: $? = 0 configure:33370: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33373: $? = 0 configure:33376: ./conftest configure:33379: $? = 0 configure:33381: result: "short" in C configure:33423: checking if Fortran "integer*8" is configure:33433: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33436: $? = 0 configure:33439: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33442: $? = 0 configure:33445: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33448: $? = 0 configure:33451: ./conftest configure:33454: $? = 0 configure:33456: result: "int" in C configure:33496: checking if Fortran "integer" is configure:33506: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33509: $? = 0 configure:33512: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33515: $? = 0 configure:33518: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33521: $? = 0 configure:33524: ./conftest configure:33527: $? = 0 configure:33529: result: "int" in C configure:33567: checking if Fortran "real" is configure:33577: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33580: $? = 0 configure:33583: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33586: $? = 0 configure:33589: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33592: $? = 0 configure:33595: ./conftest configure:33598: $? = 0 configure:33600: result: "float" in C configure:33638: checking if Fortran "doubleprecision" is configure:33648: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -c -g -O2 conftest.c configure:33651: $? = 0 configure:33654: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -g -O2 -c conftestf.f configure:33657: $? = 0 configure:33660: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -o conftest -g -O2 conftestf.o conftest.o configure:33663: $? = 0 configure:33666: ./conftest configure:33669: $? = 0 configure:33671: result: "double" in C configure:33702: checking for Fortran-equivalent to netCDF "byte" configure:33717: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:33717: $? = 0 configure:33733: result: byte configure:33739: checking for Fortran-equivalent to netCDF "short" configure:33754: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.F90 >&5 configure:33754: $? = 0 configure:33770: result: integer*2 configure:33796: checking for Fortran 77 GNU intrinsic INT configure:33820: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:33820: $? = 0 configure:33833: result: yes configure:33846: checking for Fortran 77 intrinsic INT1 configure:33864: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 conftest.f:7:16: i1 = INT1(r) 1 Error: Function 'int1' at (1) has no IMPLICIT type configure:33864: $? = 1 configure: failed program was: | | program main | implicit none | real r | integer*1 i1 | r = 12.34 | i1 = INT1(r) | end | configure:33877: result: no configure:33889: checking for Fortran 77 intrinsic INT2 configure:33907: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:33907: $? = 0 configure:33920: result: yes configure:33932: checking for Fortran 77 intrinsic INT8 configure:33950: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 -c -g -O2 conftest.f >&5 configure:33950: $? = 0 configure:33963: result: yes configure:34020: checking for gcov configure:34036: found /usr/local/bin/gcov configure:34047: result: gcov configure:34170: checking if C++ macro __func__ or __FUNCTION__ is defined configure:34202: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 conftest.cpp >&5 configure:34202: $? = 0 configure:34225: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -c -g -O2 conftest.cpp >&5 configure:34225: $? = 0 configure:34237: result: yes configure:35311: checking for latex configure:35344: result: no configure:35351: checking for dvipdf configure:35384: result: no configure:35685: checking for mpiexec configure:35703: found /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpiexec configure:35715: result: /Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpiexec configure:35796: checking for gcc configure:35814: found /usr/local/bin/gcc configure:35827: result: /usr/local/bin/gcc configure:36020: checking that generated files are newer than configure configure:36026: result: done configure:36197: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by PnetCDF config.status 1.11.2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on Lauras-MacBook-Pro.local config.status:1566: creating Makefile config.status:1566: creating src/Makefile config.status:1566: creating src/dispatchers/Makefile config.status:1566: creating src/libs/Makefile config.status:1566: creating src/include/Makefile config.status:1566: creating src/include/pnetcdf.h config.status:1566: creating src/drivers/Makefile config.status:1566: creating src/drivers/common/Makefile config.status:1566: creating src/drivers/include/Makefile config.status:1566: creating src/drivers/ncmpio/Makefile config.status:1566: creating src/drivers/nc4io/Makefile config.status:1566: creating src/drivers/ncbbio/Makefile config.status:1566: creating src/drivers/ncfoo/Makefile config.status:1566: creating src/binding/Makefile config.status:1566: creating src/binding/cxx/Makefile config.status:1566: creating src/binding/f77/Makefile config.status:1566: creating src/binding/f77/pnetcdf.inc config.status:1566: creating src/binding/f90/Makefile config.status:1566: creating src/binding/f90/pnetcdf.f90 config.status:1566: creating src/binding/f90/api.fh config.status:1566: creating src/binding/f90/nfmpi_constants.fh config.status:1566: creating src/utils/Makefile config.status:1566: creating src/utils/ncoffsets/Makefile config.status:1566: creating src/utils/pnetcdf_version/Makefile config.status:1566: creating src/utils/ncvalidator/Makefile config.status:1566: creating src/utils/ncmpidiff/Makefile config.status:1566: creating src/utils/ncmpidump/Makefile config.status:1566: creating src/utils/ncmpigen/Makefile config.status:1566: creating src/utils/ncmpilogdump/Makefile config.status:1566: creating src/utils/pnetcdf-config config.status:1566: creating src/packaging/Makefile config.status:1566: creating src/packaging/pnetcdf.pc config.status:1566: creating examples/Makefile config.status:1566: creating examples/C/Makefile config.status:1566: creating examples/tutorial/Makefile config.status:1566: creating examples/CXX/Makefile config.status:1566: creating examples/F77/Makefile config.status:1566: creating examples/F90/Makefile config.status:1566: creating examples/burst_buffer/Makefile config.status:1566: creating benchmarks/Makefile config.status:1566: creating benchmarks/C/Makefile config.status:1566: creating benchmarks/FLASH-IO/Makefile config.status:1566: creating doc/Makefile config.status:1566: creating doc/pnetcdf-api/Makefile config.status:1566: creating man/Makefile config.status:1566: creating test/Makefile config.status:1566: creating test/common/Makefile config.status:1566: creating test/C/Makefile config.status:1566: creating test/fandc/Makefile config.status:1566: creating test/nc_test/Makefile config.status:1566: creating test/cdf_format/Makefile config.status:1566: creating test/nc4/Makefile config.status:1566: creating test/header/Makefile config.status:1566: creating test/testcases/Makefile config.status:1566: creating test/nonblocking/Makefile config.status:1566: creating test/largefile/Makefile config.status:1566: creating test/CXX/Makefile config.status:1566: creating test/subfile/Makefile config.status:1566: creating test/nf_test/Makefile config.status:1566: creating test/nf_test/tests.inc config.status:1566: creating test/nf90_test/Makefile config.status:1566: creating test/nf90_test/tests.inc config.status:1566: creating test/F90/Makefile config.status:1566: creating test/burst_buffer/Makefile config.status:1566: creating src/include/config.h config.status:1780: executing depfiles commands config.status:1780: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_CHECK_MPI_CPP_SEEK_SET=no ac_cv_CHECK_MPI_DATATYPE_MPI_CHARACTER=yes ac_cv_CHECK_MPI_DATATYPE_MPI_DOUBLE_PRECISION=yes ac_cv_CHECK_MPI_DATATYPE_MPI_INTEGER1=yes ac_cv_CHECK_MPI_DATATYPE_MPI_INTEGER2=yes ac_cv_CHECK_MPI_DATATYPE_MPI_INTEGER4=yes ac_cv_CHECK_MPI_DATATYPE_MPI_INTEGER8=yes ac_cv_CHECK_MPI_DATATYPE_MPI_INTEGER=yes ac_cv_CHECK_MPI_DATATYPE_MPI_OFFSET=yes ac_cv_CHECK_MPI_DATATYPE_MPI_REAL2=no ac_cv_CHECK_MPI_DATATYPE_MPI_REAL4=yes ac_cv_CHECK_MPI_DATATYPE_MPI_REAL8=yes ac_cv_CHECK_MPI_DATATYPE_MPI_REAL=yes ac_cv_SED_I='/usr/bin/sed -i '\'''\''' ac_cv_build=x86_64-apple-darwin18.7.0 ac_cv_c_bigendian=no ac_cv_c_char_unsigned=no ac_cv_c_compiler_gnu=yes ac_cv_c_ieeefloat=yes ac_cv_c_inline=inline ac_cv_cc_compiler_fccpx=no ac_cv_cc_compiler_pgcc=no ac_cv_cc_compiler_xlc=no ac_cv_cxx_compiler_gnu=yes ac_cv_cxx_macro_func=yes ac_cv_cxx_macro_function=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=mpic++ ac_cv_env_F77_set=set ac_cv_env_F77_value=mpif77 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=mpif90 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_GCOV_set= ac_cv_env_GCOV_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPICXX_set= ac_cv_env_MPICXX_value= ac_cv_env_MPIF77_set= ac_cv_env_MPIF77_value= ac_cv_env_MPIF90_set= ac_cv_env_MPIF90_value= ac_cv_env_RM_set= ac_cv_env_RM_value= ac_cv_env_TESTMPIRUN_set= ac_cv_env_TESTMPIRUN_value= ac_cv_env_TESTOUTDIR_set= ac_cv_env_TESTOUTDIR_value= ac_cv_env_TESTSEQRUN_set= ac_cv_env_TESTSEQRUN_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_gnu_int=yes ac_cv_f77_int1=no ac_cv_f77_int2=yes ac_cv_f77_int8=yes ac_cv_f77_libs=' -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm' ac_cv_fc_compiler_gnu=yes ac_cv_fc_compiler_nag=no ac_cv_fc_constant_modifier=8 ac_cv_fc_dummy_main=none ac_cv_fc_fixedform=-ffixed-form ac_cv_fc_freeform=-ffree-form ac_cv_fc_libs=' -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_module_ext=mod ac_cv_fc_module_flag=-I ac_cv_fc_pp_define=-D ac_cv_fc_pp_srcext_F90=none ac_cv_fc_pp_srcext_F=none ac_cv_fc_srcext_F90=none ac_cv_fc_srcext_F=none ac_cv_fc_srcext_f90=none ac_cv_fc_srcext_f=none ac_cv_fortran_dummy_main=none ac_cv_func_MPI_Comm_rank=yes ac_cv_func_MPI_File_close=yes ac_cv_func_MPI_File_open=yes ac_cv_func_MPI_Get_address=yes ac_cv_func_MPI_Type_create_hindexed=yes ac_cv_func_MPI_Type_create_hvector=yes ac_cv_func_MPI_Type_create_resized=yes ac_cv_func_MPI_Type_create_struct=yes ac_cv_func_MPI_Type_create_subarray=yes ac_cv_func_MPI_Type_get_extent=yes ac_cv_func_access=yes ac_cv_func_strdup=yes ac_cv_func_strerror=yes ac_cv_func_tdelete=yes ac_cv_func_tsearch=yes ac_cv_func_unlink=yes ac_cv_have_decl_MPI_COMBINER_DARRAY=yes ac_cv_have_decl_MPI_COMBINER_DUP=yes ac_cv_have_decl_MPI_COMBINER_F90_COMPLEX=yes ac_cv_have_decl_MPI_COMBINER_F90_INTEGER=yes ac_cv_have_decl_MPI_COMBINER_F90_REAL=yes ac_cv_have_decl_MPI_COMBINER_HINDEXED_INTEGER=yes ac_cv_have_decl_MPI_COMBINER_HVECTOR_INTEGER=yes ac_cv_have_decl_MPI_COMBINER_INDEXED_BLOCK=yes ac_cv_have_decl_MPI_COMBINER_RESIZED=yes ac_cv_have_decl_MPI_COMBINER_STRUCT_INTEGER=yes ac_cv_have_decl_MPI_COMBINER_SUBARRAY=yes ac_cv_have_decl_MPI_ERR_ACCESS=yes ac_cv_have_decl_MPI_ERR_AMODE=yes ac_cv_have_decl_MPI_ERR_BAD_FILE=yes ac_cv_have_decl_MPI_ERR_FILE_EXISTS=yes ac_cv_have_decl_MPI_ERR_NOT_SAME=yes ac_cv_have_decl_MPI_ERR_NO_SPACE=yes ac_cv_have_decl_MPI_ERR_NO_SUCH_FILE=yes ac_cv_have_decl_MPI_ERR_QUOTA=yes ac_cv_have_decl_MPI_ERR_READ_ONLY=yes ac_cv_header_dlfcn_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_search_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-apple-darwin18.7.0 ac_cv_lt_mpi_check_shlib=yes ac_cv_m4_stdout= ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_SED=/usr/bin/sed ac_cv_path_SEQ_CC=/usr/local/bin/gcc ac_cv_path_ac_mpi_prog_MPICC=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc ac_cv_path_ac_mpi_prog_MPICXX=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ ac_cv_path_ac_mpi_prog_MPIF77=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ac_cv_path_ac_mpi_prog_MPIF90=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ac_cv_path_ac_mpi_prog_TESTMPIRUN=/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpiexec ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/bin/dd ac_cv_prog_AWK=awk ac_cv_prog_CPP='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E' ac_cv_prog_CXXCPP='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E' ac_cv_prog_GCOV=gcov ac_cv_prog_M4=m4 ac_cv_prog_NM='/usr/bin/nm -B' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc ' ac_cv_prog_ac_ct_DSYMUTIL=dsymutil ac_cv_prog_ac_ct_LIPO=lipo ac_cv_prog_ac_ct_NMEDIT=nmedit ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_OTOOL=otool ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_f90_uppercase_mod=no ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_MPI_Aint=8 ac_cv_sizeof_MPI_Fint=4 ac_cv_sizeof_MPI_Offset=8 ac_cv_sizeof_char=1 ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_long=8 ac_cv_sizeof_off_t=8 ac_cv_sizeof_ptrdiff_t=8 ac_cv_sizeof_short=2 ac_cv_sizeof_signed_char=1 ac_cv_sizeof_size_t=8 ac_cv_sizeof_uint=4 ac_cv_sizeof_unsigned_char=1 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long_long=8 ac_cv_sizeof_unsigned_short=2 ac_cv_sizeof_unsigned_short_int=2 ac_cv_sizeof_ushort=2 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_type_MPI_Offset=yes ac_cv_type__Bool=yes ac_cv_type_int64=no ac_cv_type_longlong=no ac_cv_type_off_t=yes ac_cv_type_ptrdiff_t=yes ac_cv_type_schar=no ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uchar=no ac_cv_type_uint64=no ac_cv_type_uint=yes ac_cv_type_ulonglong=no ac_cv_type_ushort=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_ar_interface=ar am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_apple_cc_single_mod=yes lt_cv_ar_at_file=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_exported_symbols_list=yes lt_cv_ld_force_load=yes lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fno-common -DPIC' lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC' lt_cv_prog_compiler_pic_F77=-fno-common lt_cv_prog_compiler_pic_FC=-fno-common lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_F77=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=no lt_cv_prog_gnu_ldcxx=no lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=196608 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ABIVERSION='3:2:0' ABIVERSIONFLAGS='-version-info $(ABIVERSION)' ACLOCAL='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/missing autoconf' AUTOHEADER='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/missing autoheader' AUTOMAKE='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/missing automake-1.15' AWK='awk' BUILD_BENCHMARKS_IN_PNETCDF_FALSE='#' BUILD_BENCHMARKS_IN_PNETCDF_TRUE='' BUILD_COVERAGE_FALSE='' BUILD_COVERAGE_TRUE='#' BUILD_DOCS_FALSE='' BUILD_DOCS_TRUE='#' BUILD_DRIVER_FOO_FALSE='' BUILD_DRIVER_FOO_TRUE='#' BUILD_SHARED_LIB_FALSE='#' BUILD_SHARED_LIB_TRUE='' BUILD_TESTSETS_FALSE='#' BUILD_TESTSETS_TRUE='' CC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc ' CCDEPMODE='depmode=gcc3' CFLAGS='-g -O2' CONFIGURE_ARGS_CLEAN='--prefix=/Users/LauraLaptop/InstalledSoftwares/pnetcdf-1.11.2.gfortran-8.3 --enable-shared --enable-large-file-test' CONFIG_DATE='Thu Oct 3 15:44:40 MDT 2019' CPP='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc -E' CPPFLAGS='' CXX='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ ' CXXCPP='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-g -O2' CYGPATH_W='echo' DECL_MPI_OFFSET_FALSE='#' DECL_MPI_OFFSET_TRUE='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='dsymutil' DUMPBIN='' DVIPDF='' ECHO_C='\c' ECHO_N='' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLE_BURST_BUFFER='0' ENABLE_BURST_BUFFER_FALSE='' ENABLE_BURST_BUFFER_TRUE='#' ENABLE_ERANGE_FILL='1' ENABLE_ERANGE_FILL_FALSE='#' ENABLE_ERANGE_FILL_TRUE='' ENABLE_LARGE_SINGLE_REQ='0' ENABLE_LARGE_SINGLE_REQ_FALSE='' ENABLE_LARGE_SINGLE_REQ_TRUE='#' ENABLE_NETCDF4='0' ENABLE_NETCDF4_FALSE='' ENABLE_NETCDF4_TRUE='#' ENABLE_NULL_BYTE_HEADER_PADDING='0' ENABLE_REQ_AGGREGATION='1' ENABLE_SUBFILING='0' ENABLE_SUBFILING_FALSE='' ENABLE_SUBFILING_TRUE='#' ENABLE_THREAD_SAFE='0' ENABLE_THREAD_SAFE_FALSE='' ENABLE_THREAD_SAFE_TRUE='#' EXEEXT='' F77='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ' FC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ' FCFLAGS='-g -O2' FCFLAGS_F90='' FCFLAGS_F='' FCFLAGS_f90='' FCFLAGS_f='' FCLIBS=' -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm' FC_DEFINE='-D' FC_DEFS='-DHAVE_CONFIG_H' FC_MODEXT='mod' FC_MODINC='-I' FFIXEDFORMFLAG='-ffixed-form' FFLAGS='-g -O2' FFREEFORMFLAG='-ffree-form' FGREP='/usr/bin/grep -F' FLIBS=' -L/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/lib -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0 -L/usr/local/lib/gcc/x86_64-apple-darwin18.5.0/8.3.0/../../.. -lmpifort -lmpi -lpmpi -lgfortran -lquadmath -lm' GCOV='gcov' GREP='/usr/bin/grep' HAS_FORTRAN_FALSE='#' HAS_FORTRAN_TRUE='' HAS_LATEX_FALSE='' HAS_LATEX_TRUE='#' HAS_MPICXX_FALSE='#' HAS_MPICXX_TRUE='' HAVE_F77_GNU_INT='yes' HAVE_F77_GNU_INT_FALSE='#' HAVE_F77_GNU_INT_TRUE='' HAVE_F77_INT1='no' HAVE_F77_INT1_FALSE='' HAVE_F77_INT1_TRUE='#' HAVE_F77_INT2='yes' HAVE_F77_INT2_FALSE='#' HAVE_F77_INT2_TRUE='' HAVE_F77_INT8='yes' HAVE_F77_INT8_FALSE='#' HAVE_F77_INT8_TRUE='' HAVE_F77_SUPPORT_FREEFORM_FALSE='#' HAVE_F77_SUPPORT_FREEFORM_TRUE='' HAVE_MPI_MOD_FALSE='#' HAVE_MPI_MOD_TRUE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTENTV='INOUT' IN_PLACE_SWAP='-1' IS_BIGENDIAN_FALSE='' IS_BIGENDIAN_TRUE='#' LATEX='' LD='/usr/bin/ld' LDFLAGS='' LIBOBJS='' LIBS='' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='lipo' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' M4='m4' M4FFLAGS=' -DPNETCDF' M4FLAGS=' -DPNETCDF' MAINT='' MAINTAINER_MODE_FALSE='#' MAINTAINER_MODE_TRUE='' MAKEINFO='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='./../pnetcdf-1.11.2/./scripts/install-sh -c -d' MPICC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc ' MPICC_IS_FCCPX_FALSE='' MPICC_IS_FCCPX_TRUE='#' MPICC_IS_PGCC_FALSE='' MPICC_IS_PGCC_TRUE='#' MPICC_IS_XLC_FALSE='' MPICC_IS_XLC_TRUE='#' MPICXX='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++ ' MPIF77='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ' MPIF90='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90 ' NETCDF4_INC='' NETCDF4_LDFLAGS='' NETCDF4_LIBS='' NETCDF4_PACKAGE='' NF_INT1_T='integer*1' NF_INT2_T='integer*2' NF_INT8_T='integer*8' NM='/usr/bin/nm -B' NMEDIT='nmedit' NMFLAGS='' OBJDUMP='objdump' OBJEXT='o' OTOOL64=':' OTOOL='otool' PACKAGE='pnetcdf' PACKAGE_BUGREPORT='parallel-netcdf@mcs.anl.gov' PACKAGE_NAME='PnetCDF' PACKAGE_STRING='PnetCDF 1.11.2' PACKAGE_TARNAME='pnetcdf' PACKAGE_URL='https://parallel-netcdf.github.io' PACKAGE_VERSION='1.11.2' PATH_SEPARATOR=':' PNETCDF_DEBUG='0' PNETCDF_DEBUG_FALSE='' PNETCDF_DEBUG_TRUE='#' PNETCDF_PROFILING='0' PNETCDF_PROFILING_FALSE='' PNETCDF_PROFILING_TRUE='#' PNETCDF_RELEASE_DATE='October 3, 2019' PNETCDF_RELEASE_DATE_FULL='2019-10-03' PNETCDF_VERSION='1.11.2' PNETCDF_VERSION_MAJOR='1' PNETCDF_VERSION_MINOR='11' PNETCDF_VERSION_PRE='' PNETCDF_VERSION_SUB='2' PNF_FILL_INT64='-9223372036854775806_8' PNF_FILL_UINT64='18446744073709551614_8' PNF_FILL_UINT='4294967295_8' PNF_INT8_MODIFIER='' PNF_X_INT8_MAX='9223372036854775807_8' PNF_X_INT8_MIN='-9223372036854775807_8' PNF_X_UINT8_MAX='18446744073709551615_8' PNF_X_UINT_MAX='4294967295_8' RANLIB='ranlib' RELAX_COORD_BOUND='1' RELAX_COORD_BOUND_FALSE='#' RELAX_COORD_BOUND_TRUE='' REPLACE_CXX_FUNC_MACRO_FALSE='' REPLACE_CXX_FUNC_MACRO_TRUE='#' RM='rm' RUN_LARGE_FILE_TEST_FALSE='#' RUN_LARGE_FILE_TEST_TRUE='' SED='/usr/bin/sed' SED_I='/usr/bin/sed -i '\'''\''' SEEK_SET_REDEFINED_FALSE='' SEEK_SET_REDEFINED_TRUE='#' SEQ_CC='/usr/local/bin/gcc' SET_MAKE='' SHELL='/bin/sh' SIZEOF_MPI_AINT_IS_4_FALSE='' SIZEOF_MPI_AINT_IS_4_TRUE='#' SIZEOF_MPI_OFFSET='8' STRIP='strip' TESTMPIRUN='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpiexec -n NP' TESTOUTDIR='.' TESTSEQRUN='' UPPER_CASE_MOD_FALSE='' UPPER_CASE_MOD_TRUE='#' USE_MPIF_HEADER='use mpi, only: MPI_OFFSET_KIND' VERSION='1.11.2' ac_ct_AR='ar' ac_ct_CC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc ' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' ac_cv_c_bigendian='no' ac_empty='' ac_mpi_prog_MPICC='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpicc' ac_mpi_prog_MPICXX='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpic++' ac_mpi_prog_MPIF77='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90' ac_mpi_prog_MPIF90='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpif90' ac_mpi_prog_TESTMPIRUN='/Users/LauraLaptop/InstalledSoftwares/mpich-3.3.1.gfortran-8.3/bin/mpiexec' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-apple-darwin18.7.0' build_alias='' build_cpu='x86_64' build_os='darwin18.7.0' build_vendor='apple' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enable_netcdf4='no' enable_shared='yes' enable_static='yes' exec_prefix='${prefix}' has_fortran='yes' has_mpicxx='yes' host='x86_64-apple-darwin18.7.0' host_alias='' host_cpu='x86_64' host_os='darwin18.7.0' host_vendor='apple' htmldir='${docdir}' in_place_swap='auto' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /Users/LauraLaptop/InstalledSoftwares/sourcecode/pnetcdf-1.11.2/scripts/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' nc_config='' netcdf_libdir='' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/Users/LauraLaptop/InstalledSoftwares/pnetcdf-1.11.2.gfortran-8.3' program_transform_name='s,x,x,' psdir='${docdir}' rm_cmd='' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "PnetCDF" #define PACKAGE_TARNAME "pnetcdf" #define PACKAGE_VERSION "1.11.2" #define PACKAGE_STRING "PnetCDF 1.11.2" #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" #define PACKAGE_URL "https://parallel-netcdf.github.io" #define PACKAGE "pnetcdf" #define VERSION "1.11.2" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define F77_NAME_LOWER_USCORE /**/ #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define HAVE_STRDUP 1 #define HAVE_STRERROR 1 #define HAVE_ACCESS 1 #define HAVE_UNLINK 1 #define HAVE_SEARCH_H 1 #define HAVE_TSEARCH 1 #define HAVE_TDELETE 1 #define SIZEOF_MPI_OFFSET 8 #define SIZEOF_MPI_AINT 8 #define ENABLE_REQ_AGGREGATION 1 #define HAVE_MPI_GET_ADDRESS 1 #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 #define HAVE_MPI_TYPE_CREATE_STRUCT 1 #define HAVE_MPI_TYPE_CREATE_RESIZED 1 #define HAVE_MPI_TYPE_GET_EXTENT 1 #define HAVE_DECL_MPI_COMBINER_DUP 1 #define HAVE_DECL_MPI_COMBINER_HVECTOR_INTEGER 1 #define HAVE_DECL_MPI_COMBINER_HINDEXED_INTEGER 1 #define HAVE_DECL_MPI_COMBINER_SUBARRAY 1 #define HAVE_DECL_MPI_COMBINER_DARRAY 1 #define HAVE_DECL_MPI_COMBINER_RESIZED 1 #define HAVE_DECL_MPI_COMBINER_STRUCT_INTEGER 1 #define HAVE_DECL_MPI_COMBINER_INDEXED_BLOCK 1 #define HAVE_DECL_MPI_COMBINER_F90_REAL 1 #define HAVE_DECL_MPI_COMBINER_F90_INTEGER 1 #define HAVE_DECL_MPI_COMBINER_F90_COMPLEX 1 #define HAVE_DECL_MPI_ERR_FILE_EXISTS 1 #define HAVE_DECL_MPI_ERR_NO_SUCH_FILE 1 #define HAVE_DECL_MPI_ERR_AMODE 1 #define HAVE_DECL_MPI_ERR_NOT_SAME 1 #define HAVE_DECL_MPI_ERR_BAD_FILE 1 #define HAVE_DECL_MPI_ERR_READ_ONLY 1 #define HAVE_DECL_MPI_ERR_ACCESS 1 #define HAVE_DECL_MPI_ERR_NO_SPACE 1 #define HAVE_DECL_MPI_ERR_QUOTA 1 #define HAVE_DECL_MPI_OFFSET 1 #define HAVE_DECL_MPI_INTEGER8 1 #define HAVE_DECL_MPI_CHARACTER 1 #define HAVE_DECL_MPI_REAL 1 #define HAVE_DECL_MPI_INTEGER 1 #define HAVE_DECL_MPI_DOUBLE_PRECISION 1 #define HAVE_DECL_MPI_INTEGER1 1 #define HAVE_DECL_MPI_INTEGER2 1 #define HAVE_DECL_MPI_INTEGER4 1 #define HAVE_DECL_MPI_REAL4 1 #define HAVE_DECL_MPI_REAL8 1 #define HAVE_PTRDIFF_T 1 #define HAVE_USHORT 1 #define HAVE_UINT 1 #define SIZEOF_SIZE_T 8 #define SIZEOF_OFF_T 8 #define SIZEOF_CHAR 1 #define SIZEOF_SIGNED_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT_INT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_PTRDIFF_T 8 #define SIZEOF_USHORT 2 #define SIZEOF_UINT 4 #define SIZEOF_MPI_FINT 4 #define NF_INT1_T integer*1 #define NF_INT2_T integer*2 #define NF_INT8_T integer*8 #define NF_INT1_IS_C_SIGNED_CHAR 1 #define NF_INT2_IS_C_SHORT 1 #define NF_INT8_IS_C_INT 1 #define NF_INT_IS_C_INT 1 #define NF_REAL_IS_C_FLOAT 1 #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 #define NCBYTE_T byte #define NCSHORT_T integer*2 #define RELAX_COORD_BOUND 1 configure: exit 0