<div dir="ltr"><div>Wei-keng,</div><div><br></div><div>Here is my config.log:</div><div><br></div><div>This file contains any messages produced by compilers while</div><div>running configure, to aid debugging if configure makes a mistake.</div><div><br></div><div>It was created by parallel-netcdf configure 1.6.1, which was</div><div>generated by GNU Autoconf 2.69. Invocation command line was</div><div><br></div><div> $ ./configure --prefix=/apps/pnetcdf/1.6.1-intel-mvapich2</div><div><br></div><div>## --------- ##</div><div>## Platform. ##</div><div>## --------- ##</div><div><br></div><div>hostname = fe1</div><div>uname -m = x86_64</div><div>uname -r = 2.6.32-504.16.2.el6.x86_64</div><div>uname -s = Linux</div><div>uname -v = #1 SMP Wed Apr 22 06:48:29 UTC 2015</div><div><br></div><div>/usr/bin/uname -p = unknown</div><div>/bin/uname -X = unknown</div><div><br></div><div>/bin/arch = x86_64</div><div>/usr/bin/arch -k = unknown</div><div>/usr/convex/getsysinfo = unknown</div><div>/usr/bin/hostinfo = unknown</div><div>/bin/machine = unknown</div><div>/usr/bin/oslevel = unknown</div><div>/bin/universe = unknown</div><div><br></div><div>PATH: /apps/intel/composer_xe_2015.3.187/bin/intel64</div><div>PATH: /apps/local/bin</div><div>PATH: /apps/torque/default/bin</div><div>PATH: /apps/torque/default/sbin</div><div>PATH: /usr/lib64/qt-3.3/bin</div><div>PATH: /apps/moab/default/sbin</div><div>PATH: /apps/moab/default/bin</div><div>PATH: /apps/mam/default/bin</div><div>PATH: /apps/mam/default/sbin</div><div>PATH: /usr/local/sbin</div><div>PATH: /usr/local/bin</div><div>PATH: /sbin</div><div>PATH: /bin</div><div>PATH: /usr/sbin</div><div>PATH: /usr/bin</div><div>PATH: /home/admin/bin</div><div>PATH: /root/bin</div><div>PATH: /apps/mvapich2/2.1-intel/bin</div><div><br></div><div><br></div><div>## ----------- ##</div><div>## Core tests. ##</div><div>## ----------- ##</div><div><br></div><div>configure:3229: checking for mpicc</div><div>configure:3247: found /apps/mvapich2/2.1-intel/bin/mpicc</div><div>configure:3259: result: /apps/mvapich2/2.1-intel/bin/mpicc</div><div>configure:3386: checking for gcc</div><div>configure:3413: result: /apps/mvapich2/2.1-intel/bin/mpicc</div><div>configure:3642: checking for C compiler version</div><div>configure:3651: /apps/mvapich2/2.1-intel/bin/mpicc --version >&5</div><div>icc (ICC) 15.0.3 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>configure:3662: $? = 0</div><div>configure:3651: /apps/mvapich2/2.1-intel/bin/mpicc -v >&5</div><div>mpicc for MVAPICH2 version 2.1</div><div>icc version 15.0.3 (gcc version 4.4.7 compatibility)</div><div>configure:3662: $? = 0</div><div>configure:3651: /apps/mvapich2/2.1-intel/bin/mpicc -V >&5</div><div>GNU ld version 2.20.51.0.2-5.42.el6 20100205</div><div>Intel(R) C Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.3.187 Build 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o: In function `_start':</div><div>(.text+0x20): undefined reference to `main'</div><div>configure:3662: $? = 1</div><div>configure:3651: /apps/mvapich2/2.1-intel/bin/mpicc -qversion >&5</div><div>icc: command line warning #10006: ignoring unknown option '-qversion'</div><div>/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o: In function `_start':</div><div>(.text+0x20): undefined reference to `main'</div><div>configure:3662: $? = 1</div><div>configure:3682: checking whether the C compiler works</div><div>configure:3704: /apps/mvapich2/2.1-intel/bin/mpicc conftest.c >&5</div><div>configure:3708: $? = 0</div><div>configure:3756: result: yes</div><div>configure:3759: checking for C compiler default output file name</div><div>configure:3761: result: a.out</div><div>configure:3767: checking for suffix of executables</div><div>configure:3774: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest conftest.c >&5</div><div>configure:3778: $? = 0</div><div>configure:3800: result:</div><div>configure:3822: checking whether we are cross compiling</div><div>configure:3830: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest conftest.c >&5</div><div>configure:3834: $? = 0</div><div>configure:3841: ./conftest</div><div>configure:3845: $? = 0</div><div>configure:3860: result: no</div><div>configure:3865: checking for suffix of object files</div><div>configure:3887: /apps/mvapich2/2.1-intel/bin/mpicc -c conftest.c >&5</div><div>configure:3891: $? = 0</div><div>configure:3912: result: o</div><div>configure:3916: checking whether we are using the GNU C compiler</div><div>configure:3935: /apps/mvapich2/2.1-intel/bin/mpicc -c conftest.c >&5</div><div>configure:3935: $? = 0</div><div>configure:3944: result: yes</div><div>configure:3953: checking whether /apps/mvapich2/2.1-intel/bin/mpicc accepts -g</div><div>configure:3973: /apps/mvapich2/2.1-intel/bin/mpicc -c -g conftest.c >&5</div><div>configure:3973: $? = 0</div><div>configure:4014: result: yes</div><div>configure:4031: checking for /apps/mvapich2/2.1-intel/bin/mpicc option to accept ISO C89</div><div>configure:4094: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4094: $? = 0</div><div>configure:4107: result: none needed</div><div>configure:4137: checking for special C compiler options needed for large files</div><div>configure:4182: result: no</div><div>configure:4188: checking for _FILE_OFFSET_BITS value needed for large files</div><div>configure:4213: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4213: $? = 0</div><div>configure:4245: result: no</div><div>configure:4332: checking how to make dependencies</div><div>configure:4367: result: false</div><div>configure:4377: checking how to run the C preprocessor</div><div>configure:4408: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>configure:4408: $? = 0</div><div>configure:4422: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>conftest.c(16): error #2379: cannot open source file "ac_nonexistent.h"</div><div> #include <ac_nonexistent.h></div><div> ^</div><div><br></div><div>configure:4422: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| /* end confdefs.h. */</div><div>| #include <ac_nonexistent.h></div><div>configure:4447: result: /apps/mvapich2/2.1-intel/bin/mpicc -E</div><div>configure:4467: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>configure:4467: $? = 0</div><div>configure:4481: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>conftest.c(16): error #2379: cannot open source file "ac_nonexistent.h"</div><div> #include <ac_nonexistent.h></div><div> ^</div><div><br></div><div>configure:4481: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| /* end confdefs.h. */</div><div>| #include <ac_nonexistent.h></div><div>configure:4510: checking for grep that handles long lines and -e</div><div>configure:4568: result: /bin/grep</div><div>configure:4573: checking for egrep</div><div>configure:4635: result: /bin/grep -E</div><div>configure:4640: checking for ANSI C header files</div><div>configure:4660: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4660: $? = 0</div><div>configure:4733: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:4733: $? = 0</div><div>configure:4733: ./conftest</div><div>configure:4733: $? = 0</div><div>configure:4744: result: yes</div><div>configure:4757: checking for sys/types.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for sys/stat.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for stdlib.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for string.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for memory.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for strings.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for inttypes.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for stdint.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4757: checking for unistd.h</div><div>configure:4757: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4757: $? = 0</div><div>configure:4757: result: yes</div><div>configure:4771: checking malloc.h usability</div><div>configure:4771: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:4771: $? = 0</div><div>configure:4771: result: yes</div><div>configure:4771: checking malloc.h presence</div><div>configure:4771: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>configure:4771: $? = 0</div><div>configure:4771: result: yes</div><div>configure:4771: checking for malloc.h</div><div>configure:4771: result: yes</div><div>configure:4783: checking for MPI_Comm_rank</div><div>configure:4783: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:4783: $? = 0</div><div>configure:4783: result: yes</div><div>configure:4866: checking for MPI_File_open</div><div>configure:4866: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:4866: $? = 0</div><div>configure:4866: result: yes</div><div>configure:5127: checking for mpicxx</div><div>configure:5145: found /apps/mvapich2/2.1-intel/bin/mpicxx</div><div>configure:5157: result: /apps/mvapich2/2.1-intel/bin/mpicxx</div><div>configure:5350: checking for C++ compiler version</div><div>configure:5359: /apps/mvapich2/2.1-intel/bin/mpicxx --version >&5</div><div>icpc (ICC) 15.0.3 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>configure:5370: $? = 0</div><div>configure:5359: /apps/mvapich2/2.1-intel/bin/mpicxx -v >&5</div><div>mpicxx for MVAPICH2 version 2.1</div><div>icpc version 15.0.3 (gcc version 4.4.7 compatibility)</div><div>configure:5370: $? = 0</div><div>configure:5359: /apps/mvapich2/2.1-intel/bin/mpicxx -V >&5</div><div>GNU ld version 2.20.51.0.2-5.42.el6 20100205</div><div>Intel(R) C++ Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.3.187 Build 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o: In function `_start':</div><div>(.text+0x20): undefined reference to `main'</div><div>configure:5370: $? = 1</div><div>configure:5359: /apps/mvapich2/2.1-intel/bin/mpicxx -qversion >&5</div><div>icpc: command line warning #10006: ignoring unknown option '-qversion'</div><div>/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o: In function `_start':</div><div>(.text+0x20): undefined reference to `main'</div><div>configure:5370: $? = 1</div><div>configure:5374: checking whether we are using the GNU C++ compiler</div><div>configure:5393: /apps/mvapich2/2.1-intel/bin/mpicxx -c conftest.cpp >&5</div><div>configure:5393: $? = 0</div><div>configure:5402: result: yes</div><div>configure:5411: checking whether /apps/mvapich2/2.1-intel/bin/mpicxx accepts -g</div><div>configure:5431: /apps/mvapich2/2.1-intel/bin/mpicxx -c -g conftest.cpp >&5</div><div>configure:5431: $? = 0</div><div>configure:5472: result: yes</div><div>configure:5504: checking for MPI_File_close</div><div>configure:5504: /apps/mvapich2/2.1-intel/bin/mpicxx -o conftest -g -O2 conftest.cpp >&5</div><div>configure:5504: $? = 0</div><div>configure:5504: result: yes</div><div>configure:5804: checking for mpif77</div><div>configure:5822: found /apps/mvapich2/2.1-intel/bin/mpif77</div><div>configure:5834: result: /apps/mvapich2/2.1-intel/bin/mpif77</div><div>configure:6081: checking for mpif90</div><div>configure:6099: found /apps/mvapich2/2.1-intel/bin/mpif90</div><div>configure:6111: result: /apps/mvapich2/2.1-intel/bin/mpif90</div><div>configure:6301: checking for Fortran compiler version</div><div>configure:6310: /apps/mvapich2/2.1-intel/bin/mpif90 --version >&5</div><div>ifort (IFORT) 15.0.3 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>configure:6321: $? = 0</div><div>configure:6310: /apps/mvapich2/2.1-intel/bin/mpif90 -v >&5</div><div>mpifort for MVAPICH2 version 2.1</div><div>ifort version 15.0.3</div><div>configure:6321: $? = 0</div><div>configure:6310: /apps/mvapich2/2.1-intel/bin/mpif90 -V >&5</div><div>GNU ld version 2.20.51.0.2-5.42.el6 20100205</div><div>Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.3.187 Build 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o: In function `main':</div><div>for_main.c:(.text+0x2a): undefined reference to `MAIN__'</div><div>configure:6321: $? = 1</div><div>configure:6310: /apps/mvapich2/2.1-intel/bin/mpif90 -qversion >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-qversion'</div><div>/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o: In function `main':</div><div>for_main.c:(.text+0x2a): undefined reference to `MAIN__'</div><div>configure:6321: $? = 1</div><div>configure:6330: checking whether we are using the GNU Fortran compiler</div><div>configure:6343: /apps/mvapich2/2.1-intel/bin/mpif90 -c conftest.F >&5</div><div>conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = =></div><div> choke me</div><div>---------------^</div><div>conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors.</div><div> choke me</div><div>---------------^</div><div>compilation aborted for conftest.F (code 1)</div><div>configure:6343: $? = 1</div><div>configure: failed program was:</div><div>| program main</div><div>| #ifndef __GNUC__</div><div>| choke me</div><div>| #endif</div><div>|</div><div>| end</div><div>configure:6352: result: no</div><div>configure:6358: checking whether /apps/mvapich2/2.1-intel/bin/mpif90 accepts -g</div><div>configure:6369: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:6369: $? = 0</div><div>configure:6377: result: yes</div><div>configure:6412: checking for Fortran flag to compile preprocessed .F files</div><div>configure:6437: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.F >&5</div><div>configure:6437: $? = 0</div><div>configure:6447: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.F >&5</div><div>conftest.F(4): #error: can't find include file: ac_nonexistent.h</div><div>configure:6447: $? = 1</div><div>configure: failed program was:</div><div>| program main</div><div>|</div><div>| #if 1</div><div>| #include <ac_nonexistent.h></div><div>| choke me</div><div>| #endif</div><div>| end</div><div>configure:6460: result: none</div><div>configure:6486: checking for Fortran flag to compile preprocessed .F90 files</div><div>configure:6511: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.F90 >&5</div><div>configure:6511: $? = 0</div><div>configure:6521: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.F90 >&5</div><div>conftest.F90(4): #error: can't find include file: ac_nonexistent.h</div><div>configure:6521: $? = 1</div><div>configure: failed program was:</div><div>| program main</div><div>|</div><div>| #if 1</div><div>| #include <ac_nonexistent.h></div><div>| choke me</div><div>| #endif</div><div>| end</div><div>configure:6534: result: none</div><div>configure:6573: checking for Fortran flag to compile preprocessed .F files</div><div>configure:6621: result: none</div><div>configure:6643: checking how to define symbols for preprocessed Fortran</div><div>configure:6665: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -DFOOBAR -DZORK=42 conftest.F >&5</div><div>configure:6665: $? = 0</div><div>configure:6674: result: -D</div><div>configure:6701: checking for Fortran flag to compile .f90 files</div><div>configure:6721: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f90 >&5</div><div>configure:6721: $? = 0</div><div>configure:6730: result: none</div><div>configure:6757: checking for Fortran flag needed to accept fixed-form source</div><div>configure:6774: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f90 >&5</div><div>conftest.f90(2): error #5082: Syntax error, found IDENTIFIER 'THIS' when expecting one of: ( % [ : . = =></div><div>C This comment should confuse free-form compilers.</div><div>------^</div><div>compilation aborted for conftest.f90 (code 1)</div><div>configure:6774: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| C This comment should confuse free-form compilers.</div><div>| program main</div><div>| end</div><div>configure:6774: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -ffixed-form conftest.f90 >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-ffixed-form'</div><div>conftest.f90(2): error #5082: Syntax error, found IDENTIFIER 'THIS' when expecting one of: ( % [ : . = =></div><div>C This comment should confuse free-form compilers.</div><div>------^</div><div>compilation aborted for conftest.f90 (code 1)</div><div>configure:6774: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| C This comment should confuse free-form compilers.</div><div>| program main</div><div>| end</div><div>configure:6774: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -fixed conftest.f90 >&5</div><div>configure:6774: $? = 0</div><div>configure:6783: result: -fixed</div><div>configure:6813: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f90 >&5</div><div>configure:6813: $? = 0</div><div>configure:6824: checking for Fortran flag to compile .f files</div><div>configure:6844: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:6844: $? = 0</div><div>configure:6853: result: none</div><div>configure:6999: checking for Fortran 77 compiler version</div><div>configure:7008: /apps/mvapich2/2.1-intel/bin/mpif77 --version >&5</div><div>ifort (IFORT) 15.0.3 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>configure:7019: $? = 0</div><div>configure:7008: /apps/mvapich2/2.1-intel/bin/mpif77 -v >&5</div><div>mpifort for MVAPICH2 version 2.1</div><div>ifort version 15.0.3</div><div>configure:7019: $? = 0</div><div>configure:7008: /apps/mvapich2/2.1-intel/bin/mpif77 -V >&5</div><div>GNU ld version 2.20.51.0.2-5.42.el6 20100205</div><div>Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.3.187 Build 20150407</div><div>Copyright (C) 1985-2015 Intel Corporation. All rights reserved.</div><div><br></div><div>/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o: In function `main':</div><div>for_main.c:(.text+0x2a): undefined reference to `MAIN__'</div><div>configure:7019: $? = 1</div><div>configure:7008: /apps/mvapich2/2.1-intel/bin/mpif77 -qversion >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-qversion'</div><div>/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o: In function `main':</div><div>for_main.c:(.text+0x2a): undefined reference to `MAIN__'</div><div>configure:7019: $? = 1</div><div>configure:7028: checking whether we are using the GNU Fortran 77 compiler</div><div>configure:7041: /apps/mvapich2/2.1-intel/bin/mpif77 -c conftest.F >&5</div><div>conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = =></div><div> choke me</div><div>---------------^</div><div>conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors.</div><div> choke me</div><div>---------------^</div><div>compilation aborted for conftest.F (code 1)</div><div>configure:7041: $? = 1</div><div>configure: failed program was:</div><div>| program main</div><div>| #ifndef __GNUC__</div><div>| choke me</div><div>| #endif</div><div>|</div><div>| end</div><div>configure:7050: result: no</div><div>configure:7056: checking whether /apps/mvapich2/2.1-intel/bin/mpif77 accepts -g</div><div>configure:7067: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g conftest.f >&5</div><div>configure:7067: $? = 0</div><div>configure:7075: result: yes</div><div>configure:7111: checking for Fortran flag needed to accept free-form source</div><div>configure:7130: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g conftest.f >&5</div><div>conftest.f(2): error #5149: Illegal character in statement label field [p]</div><div> program freeform</div><div>--^</div><div>conftest.f(2): error #5149: Illegal character in statement label field [r]</div><div> program freeform</div><div>---^</div><div>conftest.f(2): error #5149: Illegal character in statement label field [o]</div><div> program freeform</div><div>----^</div><div>conftest.f(2): error #5118: First statement in file must not be continued</div><div> program freeform</div><div>-----^</div><div>conftest.f(2): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = =></div><div> program freeform</div><div>------------------^</div><div>conftest.f(4): error #5082: Syntax error, found '&' when expecting one of: ( <IDENTIFIER> <CHAR_CON_KIND_PARAM> <CHAR_NAM_KIND_PARAM> <CHARACTER_CONSTANT> <INTEGER_CONSTANT> ...</div><div> print *, 'Hello ', &</div><div>--------------------------^</div><div>conftest.f(5): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: (</div><div> 'world.'</div><div>------------------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:7130: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program freeform</div><div>| ! FIXME: how to best confuse non-freeform compilers?</div><div>| print *, 'Hello ', &</div><div>| 'world.'</div><div>| end</div><div>configure:7130: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g -ffree-form conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-ffree-form'</div><div>conftest.f(2): error #5149: Illegal character in statement label field [p]</div><div> program freeform</div><div>--^</div><div>conftest.f(2): error #5149: Illegal character in statement label field [r]</div><div> program freeform</div><div>---^</div><div>conftest.f(2): error #5149: Illegal character in statement label field [o]</div><div> program freeform</div><div>----^</div><div>conftest.f(2): error #5118: First statement in file must not be continued</div><div> program freeform</div><div>-----^</div><div>conftest.f(2): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = =></div><div> program freeform</div><div>------------------^</div><div>conftest.f(4): error #5082: Syntax error, found '&' when expecting one of: ( <IDENTIFIER> <CHAR_CON_KIND_PARAM> <CHAR_NAM_KIND_PARAM> <CHARACTER_CONSTANT> <INTEGER_CONSTANT> ...</div><div> print *, 'Hello ', &</div><div>--------------------------^</div><div>conftest.f(5): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: (</div><div> 'world.'</div><div>------------------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:7130: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program freeform</div><div>| ! FIXME: how to best confuse non-freeform compilers?</div><div>| print *, 'Hello ', &</div><div>| 'world.'</div><div>| end</div><div>configure:7130: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g -FR conftest.f >&5</div><div>configure:7130: $? = 0</div><div>configure:7139: result: -FR</div><div>configure:7177: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g conftest.f >&5</div><div>configure:7177: $? = 0</div><div>configure:7231: checking build system type</div><div>configure:7245: result: x86_64-unknown-linux-gnu</div><div>configure:7265: checking host system type</div><div>configure:7278: result: x86_64-unknown-linux-gnu</div><div>configure:7302: checking how to get verbose linking output from /apps/mvapich2/2.1-intel/bin/mpif90</div><div>configure:7312: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:7312: $? = 0</div><div>configure:7330: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g -v conftest.f</div><div>mpifort for MVAPICH2 version 2.1</div><div>ifort version 15.0.3</div><div>/apps/intel/composer_xe_2015.3.187/bin/intel64/fortcom -D__INTEL_COMPILER=1500 -D__INTEL_COMPILER_UPDATE=3 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 -D__x86_64__ -D__amd64 -D__amd64__ -D_MT -D__INTEL_COMPILER_BUILD_DATE=20150407 -D__INTEL_OFFLOAD -D__i686 -D__i686__ -D__pentiumpro -D__pentiumpro__ -D__pentium4 -D__pentium4__ -D__tune_pentium4__ -D__SSE2__ -D__SSE2_MATH__ -D__SSE__ -D__SSE_MATH__ -D__MMX__ -mGLOB_pack_sort_init_list -I. -I/apps/mvapich2/2.1-intel/include -I/apps/mvapich2/2.1-intel/include -I/apps/intel/composer_xe_2015.3.187/mkl/include -I/apps/intel/composer_xe_2015.3.187/compiler/include/intel64 -I/apps/intel/composer_xe_2015.3.187/compiler/include -I/usr/local/include -I/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include -I/usr/include/ -I/usr/include "-fp_modbits honor_f32_conversion" "-fp_modbits honor_f64_conversion" -O0 -g2 -simd -offload_host -mP1OPT_version=15.0-intel64 -mGLOB_diag_file=/tmp/ifortUfVlAR.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=447 "-mGLOB_options_string=-I/apps/mvapich2/2.1-intel/include -I/apps/mvapich2/2.1-intel/include -o conftest -g -v -L/apps/mvapich2/2.1-intel/lib -lmpifort -Wl,-rpath -Wl,/apps/mvapich2/2.1-intel/lib -Wl,--enable-new-dtags -lmpi" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/apps/intel/composer_xe_2015.3.187/bin/intel64 -mP3OPT_emit_line_numbers -mP2OPT_suppress_unreferenced_locals=FALSE -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL -mDEBUG_info_level=2 -mDEBUG_use_indirect_strings=TRUE -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF30 -mGLOB_as_output_backup_file_name=/tmp/iforteG4amZas_.s -mGLOB_em64t -mGLOB_instruction_tuning=0x0 -mGLOB_product_id_code=0x22006d8f -mGLOB_maintain_errno -mGLOB_noinline_intrinsics -mGLOB_use_base_pointer -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x8 -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mIPOPT_ninl_limit=0 -mIPOPT_ninl_user_level=0 -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mP2OPT_gen_linux_const_pooling=FALSE -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=1 -mP2OPT_offload_unique_var_string=ifort0101735587494khhlwn -mGLOB_opt_level=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/apps/intel/composer_xe_2015.3.187/bin/intel64/libiml_attr.so -mIPOPT_single_file_compile_and_link=TRUE -mP2OPT_hlo_embed_loopinfo -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_obj_output_file_name=/tmp/ifortUfVlAR.o -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchMXKGa7 -mGLOB_linker_version=2.20.51.0.2 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/tmp/iforttempfile43du5F -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/tmp/ifortUfVlAR.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f</div><div>#include "..." search starts here:</div><div>#include <...> search starts here:</div><div> .</div><div> /apps/mvapich2/2.1-intel/include</div><div> /apps/mvapich2/2.1-intel/include</div><div> /apps/intel/composer_xe_2015.3.187/mkl/include</div><div> /apps/intel/composer_xe_2015.3.187/compiler/include/intel64</div><div> /apps/intel/composer_xe_2015.3.187/compiler/include</div><div> /usr/local/include</div><div> /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include</div><div> /usr/include/</div><div> /usr/include</div><div>End of search list.</div><div>ld /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/crtbegin.o --eh-frame-hdr --build-id -dynamic-linker /lib64/ld-linux-x86-64.so.2 -m elf_x86_64 -L/apps/mvapich2/2.1-intel/lib -o conftest /apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib /tmp/ifortUfVlAR.o -lmpifort -rpath /apps/mvapich2/2.1-intel/lib --enable-new-dtags -lmpi -Bdynamic -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/4.4.7/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crtn.o</div><div>configure:7413: result: -v</div><div>configure:7415: checking for Fortran libraries of /apps/mvapich2/2.1-intel/bin/mpif90</div><div>configure:7438: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g -v conftest.f</div><div>mpifort for MVAPICH2 version 2.1</div><div>ifort version 15.0.3</div><div>/apps/intel/composer_xe_2015.3.187/bin/intel64/fortcom -D__INTEL_COMPILER=1500 -D__INTEL_COMPILER_UPDATE=3 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 -D__x86_64__ -D__amd64 -D__amd64__ -D_MT -D__INTEL_COMPILER_BUILD_DATE=20150407 -D__INTEL_OFFLOAD -D__i686 -D__i686__ -D__pentiumpro -D__pentiumpro__ -D__pentium4 -D__pentium4__ -D__tune_pentium4__ -D__SSE2__ -D__SSE2_MATH__ -D__SSE__ -D__SSE_MATH__ -D__MMX__ -mGLOB_pack_sort_init_list -I. -I/apps/mvapich2/2.1-intel/include -I/apps/mvapich2/2.1-intel/include -I/apps/intel/composer_xe_2015.3.187/mkl/include -I/apps/intel/composer_xe_2015.3.187/compiler/include/intel64 -I/apps/intel/composer_xe_2015.3.187/compiler/include -I/usr/local/include -I/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include -I/usr/include/ -I/usr/include "-fp_modbits honor_f32_conversion" "-fp_modbits honor_f64_conversion" -O0 -g2 -simd -offload_host -mP1OPT_version=15.0-intel64 -mGLOB_diag_file=/tmp/iforttkO9XX.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=447 "-mGLOB_options_string=-I/apps/mvapich2/2.1-intel/include -I/apps/mvapich2/2.1-intel/include -o conftest -g -v -L/apps/mvapich2/2.1-intel/lib -lmpifort -Wl,-rpath -Wl,/apps/mvapich2/2.1-intel/lib -Wl,--enable-new-dtags -lmpi" -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/apps/intel/composer_xe_2015.3.187/bin/intel64 -mP3OPT_emit_line_numbers -mP2OPT_suppress_unreferenced_locals=FALSE -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL -mDEBUG_info_level=2 -mDEBUG_use_indirect_strings=TRUE -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF30 -mGLOB_as_output_backup_file_name=/tmp/ifortdOtDGmas_.s -mGLOB_em64t -mGLOB_instruction_tuning=0x0 -mGLOB_product_id_code=0x22006d8f -mGLOB_maintain_errno -mGLOB_noinline_intrinsics -mGLOB_use_base_pointer -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x8 -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mIPOPT_ninl_limit=0 -mIPOPT_ninl_user_level=0 -mPGOPTI_value_profile_use=T -mGLOB_opt_report_use_source_name -mP2OPT_gen_linux_const_pooling=FALSE -mP2OPT_il0_array_sections=TRUE -mGLOB_offload_mode=1 -mP2OPT_offload_unique_var_string=ifort010383805868DN6swo -mGLOB_opt_level=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/apps/intel/composer_xe_2015.3.187/bin/intel64/libiml_attr.so -mIPOPT_single_file_compile_and_link=TRUE -mP2OPT_hlo_embed_loopinfo -mPGOPTI_gen_threadsafe_level=0 -mIPOPT_obj_output_file_name=/tmp/iforttkO9XX.o -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchTZ0RwL -mGLOB_linker_version=2.20.51.0.2 -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/tmp/iforttempfileDauLZs -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/tmp/iforttkO9XX.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f</div><div>#include "..." search starts here:</div><div>#include <...> search starts here:</div><div> .</div><div> /apps/mvapich2/2.1-intel/include</div><div> /apps/mvapich2/2.1-intel/include</div><div> /apps/intel/composer_xe_2015.3.187/mkl/include</div><div> /apps/intel/composer_xe_2015.3.187/compiler/include/intel64</div><div> /apps/intel/composer_xe_2015.3.187/compiler/include</div><div> /usr/local/include</div><div> /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include</div><div> /usr/include/</div><div> /usr/include</div><div>End of search list.</div><div>ld /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/crtbegin.o --eh-frame-hdr --build-id -dynamic-linker /lib64/ld-linux-x86-64.so.2 -m elf_x86_64 -L/apps/mvapich2/2.1-intel/lib -o conftest /apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/for_main.o -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib /tmp/iforttkO9XX.o -lmpifort -rpath /apps/mvapich2/2.1-intel/lib --enable-new-dtags -lmpi -Bdynamic -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -Bdynamic -lpthread -Bstatic -lsvml -Bdynamic -lc -lgcc -lgcc_s -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/4.4.7/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/crtn.o</div><div>configure:7634: result: -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl</div><div>configure:7650: checking for dummy main to link with Fortran libraries</div><div>configure:7684: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl >&5</div><div>configure:7684: $? = 0</div><div>configure:7729: result: none</div><div>configure:7762: checking for Fortran name-mangling scheme</div><div>configure:7775: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:7775: $? = 0</div><div>configure:7816: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl >&5</div><div>/tmp/iccel0lbq.o: In function `main':</div><div>/misc/whome/admin/software/pnetcdf/parallel-netcdf-1.6.1-intel-mvapich2/conftest.c:46: undefined reference to `foobar'</div><div>configure:7816: $? = 1</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| /* end confdefs.h. */</div><div>|</div><div>| /* Override any GCC internal prototype to avoid an error.</div><div>| Use char because int might match the return type of a GCC</div><div>| builtin and then its argument prototype would still apply. */</div><div>| #ifdef __cplusplus</div><div>| extern "C"</div><div>| #endif</div><div>| char foobar ();</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| return foobar ();</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:7816: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl >&5</div><div>configure:7816: $? = 0</div><div>configure:7874: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c cfortran_test.o -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl >&5</div><div>configure:7874: $? = 0</div><div>configure:7916: result: lower case, underscore, no extra underscore</div><div>configure:7957: checking for C-equivalent to Fortran routine "SUB_A"</div><div>configure:7979: result: sub_a_</div><div>configure:8035: checking for a BSD-compatible install</div><div>configure:8103: result: /usr/bin/install -c</div><div>configure:8122: checking for gawk</div><div>configure:8138: found /bin/gawk</div><div>configure:8149: result: gawk</div><div>configure:8160: checking whether ln -s works</div><div>configure:8164: result: yes</div><div>configure:8171: checking whether make sets $(MAKE)</div><div>configure:8193: result: yes</div><div>configure:8203: checking for egrep</div><div>configure:8265: result: /bin/grep -E</div><div>configure:8279: checking for m4</div><div>configure:8295: found /usr/bin/m4</div><div>configure:8306: result: m4</div><div>configure:8362: checking m4 flags</div><div>configure:8373: result:</div><div>configure:8383: checking for ar</div><div>configure:8399: found /usr/bin/ar</div><div>configure:8410: result: ar</div><div>configure:8466: checking ar flags</div><div>configure:8471: result: cru</div><div>configure:8481: checking for nm</div><div>configure:8497: found /usr/bin/nm</div><div>configure:8508: result: nm</div><div>configure:8564: checking nm flags</div><div>configure:8569: result:</div><div>configure:8619: checking for ranlib</div><div>configure:8635: found /usr/bin/ranlib</div><div>configure:8646: result: ranlib</div><div>configure:8669: checking for stdbool.h that conforms to C99</div><div>configure:8744: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:8744: $? = 0</div><div>configure:8751: result: yes</div><div>configure:8753: checking for _Bool</div><div>configure:8753: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:8753: $? = 0</div><div>configure:8753: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(72): error: expected an expression</div><div> if (sizeof ((_Bool)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:8753: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((_Bool)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:8753: result: yes</div><div>configure:8771: checking for an ANSI C-conforming const</div><div>configure:8845: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:8845: $? = 0</div><div>configure:8852: result: yes</div><div>configure:8860: checking for inline</div><div>configure:8876: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:8876: $? = 0</div><div>configure:8884: result: inline</div><div>configure:8905: checking for IEEE floating point format</div><div>configure:8943: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8943: $? = 0</div><div>configure:8943: ./conftest</div><div>configure:8943: $? = 0</div><div>configure:8952: result: yes</div><div>configure:8964: checking for strerror</div><div>configure:8964: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8964: $? = 0</div><div>configure:8964: result: yes</div><div>configure:8964: checking for access</div><div>configure:8964: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8964: $? = 0</div><div>configure:8964: result: yes</div><div>configure:8964: checking for unlink</div><div>configure:8964: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8964: $? = 0</div><div>configure:8964: result: yes</div><div>configure:8976: checking search.h usability</div><div>configure:8976: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:8976: $? = 0</div><div>configure:8976: result: yes</div><div>configure:8976: checking search.h presence</div><div>configure:8976: /apps/mvapich2/2.1-intel/bin/mpicc -E conftest.c</div><div>configure:8976: $? = 0</div><div>configure:8976: result: yes</div><div>configure:8976: checking for search.h</div><div>configure:8976: result: yes</div><div>configure:8989: checking for tsearch</div><div>configure:8989: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8989: $? = 0</div><div>configure:8989: result: yes</div><div>configure:8989: checking for tdelete</div><div>configure:8989: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:8989: $? = 0</div><div>configure:8989: result: yes</div><div>configure:9007: checking PnetCDF debug mode</div><div>configure:9019: result: no</div><div>configure:9022: checking for MPI_Offset</div><div>configure:9022: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9022: $? = 0</div><div>configure:9022: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(49): error: expected an expression</div><div> if (sizeof ((MPI_Offset)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:9022: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| /* end confdefs.h. */</div><div>| #include <mpi.h></div><div>|</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((MPI_Offset)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:9022: result: yes</div><div>configure:9033: checking size of MPI_Offset</div><div>configure:9038: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9038: $? = 0</div><div>configure:9038: ./conftest</div><div>configure:9038: $? = 0</div><div>configure:9053: result: 8</div><div>configure:9070: checking size of MPI_Aint</div><div>configure:9075: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9075: $? = 0</div><div>configure:9075: ./conftest</div><div>configure:9075: $? = 0</div><div>configure:9090: result: 8</div><div>configure:9127: checking for MPI_Info_dup</div><div>configure:9127: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9127: $? = 0</div><div>configure:9127: result: yes</div><div>configure:9127: checking for MPI_Info_free</div><div>configure:9127: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9127: $? = 0</div><div>configure:9127: result: yes</div><div>configure:9127: checking for MPI_Get_address</div><div>configure:9127: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9127: $? = 0</div><div>configure:9127: result: yes</div><div>configure:9139: checking for MPI_Type_create_subarray</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9139: checking for MPI_Type_create_hvector</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9139: checking for MPI_Type_create_hindexed</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9139: checking for MPI_Type_create_struct</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9139: checking for MPI_Type_create_resized</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9139: checking for MPI_Type_get_extent</div><div>configure:9139: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:9139: $? = 0</div><div>configure:9139: result: yes</div><div>configure:9152: checking if MPI constant MPI_COMBINER_DUP is defined</div><div>configure:9161: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9161: $? = 0</div><div>configure:9162: result: yes</div><div>configure:9176: checking if MPI constant MPI_COMBINER_HVECTOR_INTEGER is defined</div><div>configure:9185: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9185: $? = 0</div><div>configure:9186: result: yes</div><div>configure:9200: checking if MPI constant MPI_COMBINER_HINDEXED_INTEGER is defined</div><div>configure:9209: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9209: $? = 0</div><div>configure:9210: result: yes</div><div>configure:9224: checking if MPI constant MPI_COMBINER_SUBARRAY is defined</div><div>configure:9233: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9233: $? = 0</div><div>configure:9234: result: yes</div><div>configure:9248: checking if MPI constant MPI_COMBINER_DARRAY is defined</div><div>configure:9257: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9257: $? = 0</div><div>configure:9258: result: yes</div><div>configure:9272: checking if MPI constant MPI_COMBINER_RESIZED is defined</div><div>configure:9281: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9281: $? = 0</div><div>configure:9282: result: yes</div><div>configure:9296: checking if MPI constant MPI_COMBINER_STRUCT_INTEGER is defined</div><div>configure:9305: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9305: $? = 0</div><div>configure:9306: result: yes</div><div>configure:9320: checking if MPI constant MPI_COMBINER_INDEXED_BLOCK is defined</div><div>configure:9329: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9329: $? = 0</div><div>configure:9330: result: yes</div><div>configure:9344: checking if MPI constant MPI_COMBINER_F90_REAL is defined</div><div>configure:9353: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9353: $? = 0</div><div>configure:9354: result: yes</div><div>configure:9368: checking if MPI constant MPI_COMBINER_F90_INTEGER is defined</div><div>configure:9377: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9377: $? = 0</div><div>configure:9378: result: yes</div><div>configure:9392: checking if MPI constant MPI_COMBINER_F90_COMPLEX is defined</div><div>configure:9401: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9401: $? = 0</div><div>configure:9402: result: yes</div><div>configure:9417: checking if MPI constant MPI_ERR_FILE_EXISTS is defined</div><div>configure:9426: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9426: $? = 0</div><div>configure:9427: result: yes</div><div>configure:9441: checking if MPI constant MPI_ERR_NO_SUCH_FILE is defined</div><div>configure:9450: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9450: $? = 0</div><div>configure:9451: result: yes</div><div>configure:9465: checking if MPI constant MPI_ERR_AMODE is defined</div><div>configure:9474: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9474: $? = 0</div><div>configure:9475: result: yes</div><div>configure:9489: checking if MPI constant MPI_ERR_NOT_SAME is defined</div><div>configure:9498: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9498: $? = 0</div><div>configure:9499: result: yes</div><div>configure:9513: checking if MPI constant MPI_ERR_BAD_FILE is defined</div><div>configure:9522: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9522: $? = 0</div><div>configure:9523: result: yes</div><div>configure:9537: checking if MPI constant MPI_ERR_READ_ONLY is defined</div><div>configure:9546: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9546: $? = 0</div><div>configure:9547: result: yes</div><div>configure:9561: checking if MPI constant MPI_ERR_ACCESS is defined</div><div>configure:9570: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9570: $? = 0</div><div>configure:9571: result: yes</div><div>configure:9585: checking if MPI constant MPI_ERR_NO_SPACE is defined</div><div>configure:9594: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9594: $? = 0</div><div>configure:9595: result: yes</div><div>configure:9609: checking if MPI constant MPI_ERR_QUOTA is defined</div><div>configure:9618: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9618: $? = 0</div><div>configure:9619: result: yes</div><div>configure:9636: checking if MPI datatype MPI_CHAR is defined</div><div>configure:9645: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9645: $? = 0</div><div>configure:9646: result: yes</div><div>configure:9660: checking if MPI datatype MPI_BYTE is defined</div><div>configure:9669: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9669: $? = 0</div><div>configure:9670: result: yes</div><div>configure:9684: checking if MPI datatype MPI_UNSIGNED_CHAR is defined</div><div>configure:9693: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9693: $? = 0</div><div>configure:9694: result: yes</div><div>configure:9708: checking if MPI datatype MPI_SHORT is defined</div><div>configure:9717: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9717: $? = 0</div><div>configure:9718: result: yes</div><div>configure:9732: checking if MPI datatype MPI_UNSIGNED_SHORT is defined</div><div>configure:9741: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9741: $? = 0</div><div>configure:9742: result: yes</div><div>configure:9756: checking if MPI datatype MPI_INT is defined</div><div>configure:9765: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9765: $? = 0</div><div>configure:9766: result: yes</div><div>configure:9780: checking if MPI datatype MPI_UNSIGNED is defined</div><div>configure:9789: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9789: $? = 0</div><div>configure:9790: result: yes</div><div>configure:9804: checking if MPI datatype MPI_LONG is defined</div><div>configure:9813: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9813: $? = 0</div><div>configure:9814: result: yes</div><div>configure:9828: checking if MPI datatype MPI_FLOAT is defined</div><div>configure:9837: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9837: $? = 0</div><div>configure:9838: result: yes</div><div>configure:9852: checking if MPI datatype MPI_DOUBLE is defined</div><div>configure:9861: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9861: $? = 0</div><div>configure:9862: result: yes</div><div>configure:9876: checking if MPI datatype MPI_LONG_LONG_INT is defined</div><div>configure:9885: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9885: $? = 0</div><div>configure:9886: result: yes</div><div>configure:9900: checking if MPI datatype MPI_UNSIGNED_LONG_LONG is defined</div><div>configure:9909: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9909: $? = 0</div><div>configure:9910: result: yes</div><div>configure:9924: checking if MPI datatype MPI_UB is defined</div><div>configure:9933: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9933: $? = 0</div><div>configure:9934: result: yes</div><div>configure:9948: checking if MPI datatype MPI_LB is defined</div><div>configure:9957: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9957: $? = 0</div><div>configure:9958: result: yes</div><div>configure:9972: checking if MPI datatype MPI_OFFSET is defined</div><div>configure:9981: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:9981: $? = 0</div><div>configure:9982: result: yes</div><div>configure:9998: checking if MPI datatype MPI_CHARACTER is defined</div><div>configure:10007: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10007: $? = 0</div><div>configure:10008: result: yes</div><div>configure:10022: checking if MPI datatype MPI_REAL is defined</div><div>configure:10031: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10031: $? = 0</div><div>configure:10032: result: yes</div><div>configure:10046: checking if MPI datatype MPI_INTEGER is defined</div><div>configure:10055: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10055: $? = 0</div><div>configure:10056: result: yes</div><div>configure:10070: checking if MPI datatype MPI_DOUBLE_PRECISION is defined</div><div>configure:10079: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10079: $? = 0</div><div>configure:10080: result: yes</div><div>configure:10094: checking if MPI datatype MPI_INTEGER1 is defined</div><div>configure:10103: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10103: $? = 0</div><div>configure:10104: result: yes</div><div>configure:10118: checking if MPI datatype MPI_INTEGER2 is defined</div><div>configure:10127: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10127: $? = 0</div><div>configure:10128: result: yes</div><div>configure:10142: checking if MPI datatype MPI_INTEGER4 is defined</div><div>configure:10151: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10151: $? = 0</div><div>configure:10152: result: yes</div><div>configure:10166: checking if MPI datatype MPI_INTEGER8 is defined</div><div>configure:10175: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10175: $? = 0</div><div>configure:10176: result: yes</div><div>configure:10190: checking if MPI datatype MPI_INTEGER16 is defined</div><div>configure:10199: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10199: $? = 0</div><div>configure:10200: result: yes</div><div>configure:10214: checking if MPI datatype MPI_REAL4 is defined</div><div>configure:10223: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10223: $? = 0</div><div>configure:10224: result: yes</div><div>configure:10238: checking if MPI datatype MPI_REAL8 is defined</div><div>configure:10247: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10247: $? = 0</div><div>configure:10248: result: yes</div><div>configure:10262: checking if MPI datatype MPI_REAL16 is defined</div><div>configure:10271: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10271: $? = 0</div><div>configure:10272: result: yes</div><div>configure:10286: checking if MPI datatype MPI_COMPLEX8 is defined</div><div>configure:10295: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10295: $? = 0</div><div>configure:10296: result: yes</div><div>configure:10310: checking if MPI datatype MPI_COMPLEX16 is defined</div><div>configure:10319: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10319: $? = 0</div><div>configure:10320: result: yes</div><div>configure:10334: checking if MPI datatype MPI_COMPLEX32 is defined</div><div>configure:10343: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10343: $? = 0</div><div>configure:10344: result: yes</div><div>configure:10372: checking whether char is unsigned</div><div>configure:10399: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10399: $? = 0</div><div>configure:10406: result: no</div><div>configure:10413: checking whether byte ordering is bigendian</div><div>configure:10428: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(100): error: identifier "not" is undefined</div><div> <span class="" style="white-space:pre"> </span> not a universal capable compiler</div><div> <span class="" style="white-space:pre"> </span> ^</div><div><br></div><div>conftest.c(100): error: expected a ";"</div><div> <span class="" style="white-space:pre"> </span> not a universal capable compiler</div><div> <span class="" style="white-space:pre"> </span> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10428: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| /* end confdefs.h. */</div><div>| #ifndef __APPLE_CC__</div><div>| <span class="" style="white-space:pre"> </span> not a universal capable compiler</div><div>| <span class="" style="white-space:pre"> </span> #endif</div><div>| <span class="" style="white-space:pre"> </span> typedef int dummy;</div><div>|</div><div>configure:10481: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10481: $? = 0</div><div>configure:10507: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(114): error: identifier "not" is undefined</div><div> <span class="" style="white-space:pre"> </span> not big endian</div><div> <span class="" style="white-space:pre"> </span> ^</div><div><br></div><div>conftest.c(114): error: expected a ";"</div><div> <span class="" style="white-space:pre"> </span> not big endian</div><div> <span class="" style="white-space:pre"> </span> ^</div><div><br></div><div>conftest.c(117): warning #12: parsing restarts here after previous syntax error</div><div> ;</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10507: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| /* end confdefs.h. */</div><div>| #include <sys/types.h></div><div>| <span class="" style="white-space:pre"> </span>#include <sys/param.h></div><div>|</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| #if BYTE_ORDER != BIG_ENDIAN</div><div>| <span class="" style="white-space:pre"> </span> not big endian</div><div>| <span class="" style="white-space:pre"> </span>#endif</div><div>|</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10667: result: no</div><div>configure:10698: checking return type of signal handlers</div><div>configure:10724: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(113): error: operand of "*" must be a pointer</div><div> return *(signal (0, 0)) (0) == 1;</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10724: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| /* end confdefs.h. */</div><div>| #include <sys/types.h></div><div>| #include <signal.h></div><div>|</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| return *(signal (0, 0)) (0) == 1;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10731: result: void</div><div>configure:10739: checking for size_t</div><div>configure:10739: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10739: $? = 0</div><div>configure:10739: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(144): error: expected an expression</div><div> if (sizeof ((size_t)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10739: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((size_t)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10739: result: yes</div><div>configure:10750: checking for off_t</div><div>configure:10750: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10750: $? = 0</div><div>configure:10750: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(144): error: expected an expression</div><div> if (sizeof ((off_t)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10750: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((off_t)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10750: result: yes</div><div>configure:10761: checking for ssize_t</div><div>configure:10761: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10761: $? = 0</div><div>configure:10761: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(144): error: expected an expression</div><div> if (sizeof ((ssize_t)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10761: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((ssize_t)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10761: result: yes</div><div>configure:10770: checking for ptrdiff_t</div><div>configure:10770: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10770: $? = 0</div><div>configure:10770: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(145): error: expected an expression</div><div> if (sizeof ((ptrdiff_t)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10770: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((ptrdiff_t)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10770: result: yes</div><div>configure:10779: checking for uchar</div><div>configure:10779: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(146): error: identifier "uchar" is undefined</div><div> if (sizeof (uchar))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10779: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| #define HAVE_PTRDIFF_T 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof (uchar))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10779: result: no</div><div>configure:10788: checking for ushort</div><div>configure:10788: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10788: $? = 0</div><div>configure:10788: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(146): error: expected an expression</div><div> if (sizeof ((ushort)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10788: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| #define HAVE_PTRDIFF_T 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((ushort)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10788: result: yes</div><div>configure:10797: checking for uint</div><div>configure:10797: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>configure:10797: $? = 0</div><div>configure:10797: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(147): error: expected an expression</div><div> if (sizeof ((uint)))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10797: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| #define HAVE_PTRDIFF_T 1</div><div>| #define HAVE_USHORT 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof ((uint)))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10797: result: yes</div><div>configure:10806: checking for longlong</div><div>configure:10806: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(148): error: identifier "longlong" is undefined</div><div> if (sizeof (longlong))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10806: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| #define HAVE_PTRDIFF_T 1</div><div>| #define HAVE_USHORT 1</div><div>| #define HAVE_UINT 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof (longlong))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10806: result: no</div><div>configure:10815: checking for ulonglong</div><div>configure:10815: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c >&5</div><div>conftest.c(148): error: identifier "ulonglong" is undefined</div><div> if (sizeof (ulonglong))</div><div> ^</div><div><br></div><div>compilation aborted for conftest.c (code 2)</div><div>configure:10815: $? = 2</div><div>configure: failed program was:</div><div>| /* confdefs.h */</div><div>| #define PACKAGE_NAME "parallel-netcdf"</div><div>| #define PACKAGE_TARNAME "parallel-netcdf"</div><div>| #define PACKAGE_VERSION "1.6.1"</div><div>| #define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>| #define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>| #define PACKAGE_URL ""</div><div>| #define PNETCDF_VERSION_MAJOR 1</div><div>| #define PNETCDF_VERSION_MINOR 6</div><div>| #define PNETCDF_VERSION_SUB 1</div><div>| #define PNETCDF_VERSION_PRE</div><div>| #define PNETCDF_VERSION "1.6.1"</div><div>| #define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>| #define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>| #define STDC_HEADERS 1</div><div>| #define HAVE_SYS_TYPES_H 1</div><div>| #define HAVE_SYS_STAT_H 1</div><div>| #define HAVE_STDLIB_H 1</div><div>| #define HAVE_STRING_H 1</div><div>| #define HAVE_MEMORY_H 1</div><div>| #define HAVE_STRINGS_H 1</div><div>| #define HAVE_INTTYPES_H 1</div><div>| #define HAVE_STDINT_H 1</div><div>| #define HAVE_UNISTD_H 1</div><div>| #define HAVE_MALLOC_H 1</div><div>| #define F77_NAME_LOWER_USCORE /**/</div><div>| #define HAVE__BOOL 1</div><div>| #define HAVE_STDBOOL_H 1</div><div>| #define HAVE_STRERROR 1</div><div>| #define HAVE_ACCESS 1</div><div>| #define HAVE_UNLINK 1</div><div>| #define HAVE_SEARCH_H 1</div><div>| #define HAVE_TSEARCH 1</div><div>| #define HAVE_TDELETE 1</div><div>| #define SIZEOF_MPI_OFFSET 8</div><div>| #define SIZEOF_MPI_AINT 8</div><div>| #define ENABLE_CDF5 /**/</div><div>| #define ENABLE_NONBLOCKING /**/</div><div>| #define HAVE_MPI_INFO_DUP 1</div><div>| #define HAVE_MPI_INFO_FREE 1</div><div>| #define HAVE_MPI_GET_ADDRESS 1</div><div>| #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>| #define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>| #define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>| #define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>| #define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>| #define HAVE_MPI_COMBINER_DUP 1</div><div>| #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>| #define HAVE_MPI_COMBINER_DARRAY 1</div><div>| #define HAVE_MPI_COMBINER_RESIZED 1</div><div>| #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>| #define HAVE_MPI_COMBINER_F90_REAL 1</div><div>| #define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>| #define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>| #define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>| #define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>| #define HAVE_MPI_ERR_AMODE 1</div><div>| #define HAVE_MPI_ERR_NOT_SAME 1</div><div>| #define HAVE_MPI_ERR_BAD_FILE 1</div><div>| #define HAVE_MPI_ERR_READ_ONLY 1</div><div>| #define HAVE_MPI_ERR_ACCESS 1</div><div>| #define HAVE_MPI_ERR_NO_SPACE 1</div><div>| #define HAVE_MPI_ERR_QUOTA 1</div><div>| #define HAVE_MPI_CHAR 1</div><div>| #define HAVE_MPI_BYTE 1</div><div>| #define HAVE_MPI_UNSIGNED_CHAR 1</div><div>| #define HAVE_MPI_SHORT 1</div><div>| #define HAVE_MPI_UNSIGNED_SHORT 1</div><div>| #define HAVE_MPI_INT 1</div><div>| #define HAVE_MPI_UNSIGNED 1</div><div>| #define HAVE_MPI_LONG 1</div><div>| #define HAVE_MPI_FLOAT 1</div><div>| #define HAVE_MPI_DOUBLE 1</div><div>| #define HAVE_MPI_LONG_LONG_INT 1</div><div>| #define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>| #define HAVE_MPI_UB 1</div><div>| #define HAVE_MPI_LB 1</div><div>| #define HAVE_MPI_OFFSET_DATATYPE 1</div><div>| #define HAVE_MPI_CHARACTER 1</div><div>| #define HAVE_MPI_REAL 1</div><div>| #define HAVE_MPI_INTEGER 1</div><div>| #define HAVE_MPI_DOUBLE_PRECISION 1</div><div>| #define HAVE_MPI_INTEGER1 1</div><div>| #define HAVE_MPI_INTEGER2 1</div><div>| #define HAVE_MPI_INTEGER4 1</div><div>| #define HAVE_MPI_INTEGER8 1</div><div>| #define HAVE_MPI_INTEGER16 1</div><div>| #define HAVE_MPI_REAL4 1</div><div>| #define HAVE_MPI_REAL8 1</div><div>| #define HAVE_MPI_REAL16 1</div><div>| #define HAVE_MPI_COMPLEX8 1</div><div>| #define HAVE_MPI_COMPLEX16 1</div><div>| #define HAVE_MPI_COMPLEX32 1</div><div>| #define RETSIGTYPE void</div><div>| #define HAVE_SSIZE_T 1</div><div>| #define HAVE_PTRDIFF_T 1</div><div>| #define HAVE_USHORT 1</div><div>| #define HAVE_UINT 1</div><div>| /* end confdefs.h. */</div><div>| #include <stdio.h></div><div>| #ifdef HAVE_SYS_TYPES_H</div><div>| # include <sys/types.h></div><div>| #endif</div><div>| #ifdef HAVE_SYS_STAT_H</div><div>| # include <sys/stat.h></div><div>| #endif</div><div>| #ifdef STDC_HEADERS</div><div>| # include <stdlib.h></div><div>| # include <stddef.h></div><div>| #else</div><div>| # ifdef HAVE_STDLIB_H</div><div>| # include <stdlib.h></div><div>| # endif</div><div>| #endif</div><div>| #ifdef HAVE_STRING_H</div><div>| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H</div><div>| # include <memory.h></div><div>| # endif</div><div>| # include <string.h></div><div>| #endif</div><div>| #ifdef HAVE_STRINGS_H</div><div>| # include <strings.h></div><div>| #endif</div><div>| #ifdef HAVE_INTTYPES_H</div><div>| # include <inttypes.h></div><div>| #endif</div><div>| #ifdef HAVE_STDINT_H</div><div>| # include <stdint.h></div><div>| #endif</div><div>| #ifdef HAVE_UNISTD_H</div><div>| # include <unistd.h></div><div>| #endif</div><div>| #ifdef FC_DUMMY_MAIN</div><div>| #ifndef FC_DUMMY_MAIN_EQ_F77</div><div>| # ifdef __cplusplus</div><div>| extern "C"</div><div>| # endif</div><div>| int FC_DUMMY_MAIN() { return 1; }</div><div>| #endif</div><div>| #endif</div><div>| int</div><div>| main ()</div><div>| {</div><div>| if (sizeof (ulonglong))</div><div>| <span class="" style="white-space:pre"> </span> return 0;</div><div>| ;</div><div>| return 0;</div><div>| }</div><div>configure:10815: result: no</div><div>configure:10830: checking size of size_t</div><div>configure:10835: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:10835: $? = 0</div><div>configure:10835: ./conftest</div><div>configure:10835: $? = 0</div><div>configure:10849: result: 8</div><div>configure:10863: checking size of off_t</div><div>configure:10868: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:10868: $? = 0</div><div>configure:10868: ./conftest</div><div>configure:10868: $? = 0</div><div>configure:10882: result: 8</div><div>configure:10896: checking size of signed char</div><div>configure:10901: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:10901: $? = 0</div><div>configure:10901: ./conftest</div><div>configure:10901: $? = 0</div><div>configure:10915: result: 1</div><div>configure:10929: checking size of unsigned char</div><div>configure:10934: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:10934: $? = 0</div><div>configure:10934: ./conftest</div><div>configure:10934: $? = 0</div><div>configure:10948: result: 1</div><div>configure:10962: checking size of short</div><div>configure:10967: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:10967: $? = 0</div><div>configure:10967: ./conftest</div><div>configure:10967: $? = 0</div><div>configure:10981: result: 2</div><div>configure:10995: checking size of unsigned short</div><div>configure:11000: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11000: $? = 0</div><div>configure:11000: ./conftest</div><div>configure:11000: $? = 0</div><div>configure:11014: result: 2</div><div>configure:11028: checking size of int</div><div>configure:11033: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11033: $? = 0</div><div>configure:11033: ./conftest</div><div>configure:11033: $? = 0</div><div>configure:11047: result: 4</div><div>configure:11061: checking size of unsigned int</div><div>configure:11066: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11066: $? = 0</div><div>configure:11066: ./conftest</div><div>configure:11066: $? = 0</div><div>configure:11080: result: 4</div><div>configure:11094: checking size of long</div><div>configure:11099: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11099: $? = 0</div><div>configure:11099: ./conftest</div><div>configure:11099: $? = 0</div><div>configure:11113: result: 8</div><div>configure:11127: checking size of float</div><div>configure:11132: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11132: $? = 0</div><div>configure:11132: ./conftest</div><div>configure:11132: $? = 0</div><div>configure:11146: result: 4</div><div>configure:11160: checking size of double</div><div>configure:11165: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11165: $? = 0</div><div>configure:11165: ./conftest</div><div>configure:11165: $? = 0</div><div>configure:11179: result: 8</div><div>configure:11193: checking size of long long</div><div>configure:11198: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11198: $? = 0</div><div>configure:11198: ./conftest</div><div>configure:11198: $? = 0</div><div>configure:11212: result: 8</div><div>configure:11226: checking size of unsigned long long</div><div>configure:11231: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11231: $? = 0</div><div>configure:11231: ./conftest</div><div>configure:11231: $? = 0</div><div>configure:11245: result: 8</div><div>configure:11261: checking size of ushort</div><div>configure:11266: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11266: $? = 0</div><div>configure:11266: ./conftest</div><div>configure:11266: $? = 0</div><div>configure:11280: result: 2</div><div>configure:11296: checking size of uint</div><div>configure:11301: /apps/mvapich2/2.1-intel/bin/mpicc -o conftest -g -O2 conftest.c >&5</div><div>configure:11301: $? = 0</div><div>configure:11301: ./conftest</div><div>configure:11301: $? = 0</div><div>configure:11315: result: 4</div><div>configure:11524: checking for C-equivalent to Fortran routine "SUB"</div><div>configure:11545: result: sub_</div><div>configure:11563: checking for Fortran "integer*1"</div><div>configure:11572: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:11572: $? = 0</div><div>configure:11573: result: yes</div><div>configure:11602: checking for Fortran "integer*2"</div><div>configure:11611: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:11611: $? = 0</div><div>configure:11612: result: yes</div><div>configure:11641: checking for Fortran "integer*8"</div><div>configure:11650: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:11650: $? = 0</div><div>configure:11651: result: yes</div><div>configure:11686: checking if Fortran "integer*1" is</div><div>configure:11696: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11699: $? = 0</div><div>configure:11702: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:11705: $? = 0</div><div>configure:11708: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:11711: $? = 0</div><div>configure:11714: ./conftest</div><div>configure:11717: $? = 0</div><div>configure:11719: result: "signed char" in C</div><div>configure:11762: checking if Fortran "integer*2" is</div><div>configure:11772: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11775: $? = 0</div><div>configure:11778: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:11781: $? = 0</div><div>configure:11784: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:11787: $? = 0</div><div>configure:11790: ./conftest</div><div>configure:11793: $? = 0</div><div>configure:11795: result: "short" in C</div><div>configure:11838: checking if Fortran "integer*8" is</div><div>configure:11848: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11851: $? = 0</div><div>configure:11854: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:11857: $? = 0</div><div>configure:11860: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:11863: $? = 0</div><div>configure:11866: ./conftest</div><div>configure:11869: $? = 1</div><div>configure:11848: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11851: $? = 0</div><div>configure:11854: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:11857: $? = 0</div><div>configure:11860: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:11863: $? = 0</div><div>configure:11866: ./conftest</div><div>configure:11869: $? = 0</div><div>configure:11871: result: "long" in C</div><div>configure:11912: checking if Fortran "integer" is</div><div>configure:11922: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11925: $? = 0</div><div>configure:11928: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:11931: $? = 0</div><div>configure:11934: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:11937: $? = 0</div><div>configure:11940: ./conftest</div><div>configure:11943: $? = 0</div><div>configure:11945: result: "int" in C</div><div>configure:11984: checking if Fortran "real" is</div><div>configure:11994: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:11997: $? = 0</div><div>configure:12000: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:12003: $? = 0</div><div>configure:12006: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:12009: $? = 0</div><div>configure:12012: ./conftest</div><div>configure:12015: $? = 0</div><div>configure:12017: result: "float" in C</div><div>configure:12056: checking if Fortran "doubleprecision" is</div><div>configure:12066: /apps/mvapich2/2.1-intel/bin/mpicc -c -g -O2 conftest.c</div><div>configure:12069: $? = 0</div><div>configure:12072: /apps/mvapich2/2.1-intel/bin/mpif90 -g -c conftestf.f</div><div>configure:12075: $? = 0</div><div>configure:12078: /apps/mvapich2/2.1-intel/bin/mpif90 -o conftest -g conftestf.o conftest.o</div><div>configure:12081: $? = 0</div><div>configure:12084: ./conftest</div><div>configure:12087: $? = 0</div><div>configure:12089: result: "double" in C</div><div>configure:12120: checking for Fortran-equivalent to netCDF "byte"</div><div>configure:12135: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:12135: $? = 0</div><div>configure:12151: result: byte</div><div>configure:12157: checking for Fortran-equivalent to netCDF "short"</div><div>configure:12172: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:12172: $? = 0</div><div>configure:12188: result: integer*2</div><div>configure:12201: checking for Fortran NFMPI_OFFSET "integer*8"</div><div>configure:12215: /apps/mvapich2/2.1-intel/bin/mpif77 -c -g conftest.f >&5</div><div>configure:12215: $? = 0</div><div>configure:12229: result: yes</div><div>configure:12248: checking Fortran 90 module extension</div><div>configure:12270: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:12270: $? = 0</div><div>configure:12287: result: mod</div><div>configure:12305: checking Fortran 90 module inclusion flag</div><div>configure:12327: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:12327: $? = 0</div><div>configure:12341: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -Mconftest.dir -Mconftest.dir conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-Mconftest.dir'</div><div>ifort: command line warning #10006: ignoring unknown option '-Mconftest.dir'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12341: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12341: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -Iconftest.dir -Iconftest.dir conftest.f >&5</div><div>configure:12341: $? = 0</div><div>configure:12362: result: -I</div><div>configure:12384: checking Fortran 90 module output flag</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -Jsub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-Jsub'</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -Jsub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-Jsub'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12421: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -J sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-J'</div><div>ifort: warning #10145: no action performed for file 'sub'</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -J sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-J'</div><div>ifort: error #10236: File not found: 'sub'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12421: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -fmod=sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-fmod=sub'</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -fmod=sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-fmod=sub'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12421: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -moddir=sub conftest.f >&5</div><div>ifort: command line warning #10159: invalid argument for option '-m'</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -moddir=sub conftest.f >&5</div><div>ifort: command line warning #10159: invalid argument for option '-m'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12421: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g +moddir=sub conftest.f >&5</div><div>ifort: error #10236: File not found: '+moddir=sub'</div><div>configure:12412: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| module conftest_module</div><div>| contains</div><div>| subroutine conftest_routine</div><div>| write(*,'(a)') 'gotcha!'</div><div>| end subroutine</div><div>| end module</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -qmoddir=sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-qmoddir=sub'</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -qmoddir=sub conftest.f >&5</div><div>ifort: command line warning #10006: ignoring unknown option '-qmoddir=sub'</div><div>conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE]</div><div> use conftest_module</div><div>----------^</div><div>compilation aborted for conftest.f (code 1)</div><div>configure:12421: $? = 1</div><div>configure: failed program was:</div><div>|</div><div>| program main</div><div>| use conftest_module</div><div>| call conftest_routine</div><div>| end program</div><div>configure:12412: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -mod sub conftest.f >&5</div><div>configure:12412: $? = 0</div><div>configure:12421: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g -mod sub conftest.f >&5</div><div>configure:12421: $? = 0</div><div>configure:12443: result: -mod</div><div>configure:12473: checking if Fortran 90 compiler capitalizes .mod filenames</div><div>configure:12482: /apps/mvapich2/2.1-intel/bin/mpif90 -c -g conftest.f >&5</div><div>configure:12482: $? = 0</div><div>configure:12492: result: no</div><div>configure:12607: checking for manual-page index command</div><div>configure:12609: result:</div><div>configure:12689: checking for latex</div><div>configure:12707: found /usr/bin/latex</div><div>configure:12719: result: /usr/bin/latex</div><div>configure:12729: checking for dvipdf</div><div>configure:12747: found /usr/bin/dvipdf</div><div>configure:12759: result: /usr/bin/dvipdf</div><div>configure:12945: creating ./config.status</div><div><br></div><div>## ---------------------- ##</div><div>## Running config.status. ##</div><div>## ---------------------- ##</div><div><br></div><div>This file was extended by parallel-netcdf config.status 1.6.1, which was</div><div>generated by GNU Autoconf 2.69. Invocation command line was</div><div><br></div><div> CONFIG_FILES =</div><div> CONFIG_HEADERS =</div><div> CONFIG_LINKS =</div><div> CONFIG_COMMANDS =</div><div> $ ./config.status</div><div><br></div><div>on fe1</div><div><br></div><div>config.status:1052: creating macros.make</div><div>config.status:1052: creating Makefile</div><div>config.status:1052: creating src/Makefile</div><div>config.status:1052: creating src/lib/Makefile</div><div>config.status:1052: creating src/lib/pnetcdf.h</div><div>config.status:1052: creating src/utils/Makefile</div><div>config.status:1052: creating src/utils/ncmpidump/Makefile</div><div>config.status:1052: creating src/utils/ncmpidiff/Makefile</div><div>config.status:1052: creating src/utils/ncmpigen/Makefile</div><div>config.status:1052: creating src/utils/ncmpivalid/Makefile</div><div>config.status:1052: creating src/utils/pnetcdf_version/Makefile</div><div>config.status:1052: creating test/Makefile</div><div>config.status:1052: creating test/common/Makefile</div><div>config.status:1052: creating test/nc_test/Makefile</div><div>config.status:1052: creating test/C/Makefile</div><div>config.status:1052: creating test/test_int/Makefile</div><div>config.status:1052: creating test/test_float/Makefile</div><div>config.status:1052: creating test/test_double/Makefile</div><div>config.status:1052: creating test/test_double_int/Makefile</div><div>config.status:1052: creating test/test_dtype/Makefile</div><div>config.status:1052: creating test/fandc/Makefile</div><div>config.status:1052: creating test/testcases/Makefile</div><div>config.status:1052: creating test/nonblocking/Makefile</div><div>config.status:1052: creating test/header/Makefile</div><div>config.status:1052: creating test/cdf_format/Makefile</div><div>config.status:1052: creating test/largefile/Makefile</div><div>config.status:1052: creating test/data/Makefile</div><div>config.status:1052: creating examples/C/Makefile</div><div>config.status:1052: creating examples/tutorial/Makefile</div><div>config.status:1052: creating examples/Makefile</div><div>config.status:1052: creating doc/Makefile</div><div>config.status:1052: creating man/Makefile</div><div>config.status:1052: creating scripts/Makefile</div><div>config.status:1052: creating benchmarks/Makefile</div><div>config.status:1052: creating benchmarks/C/Makefile</div><div>config.status:1052: creating test/nf_test/Makefile</div><div>config.status:1052: creating test/nf90_test/Makefile</div><div>config.status:1052: creating test/F90/Makefile</div><div>config.status:1052: creating examples/F77/Makefile</div><div>config.status:1052: creating examples/F90/Makefile</div><div>config.status:1052: creating src/libf90/Makefile</div><div>config.status:1052: creating src/libf90/api.f90</div><div>config.status:1052: creating src/libf90/nfmpi_constants.f90</div><div>config.status:1052: creating src/libf/Makefile</div><div>config.status:1052: creating src/libf/pnetcdf.inc</div><div>config.status:1052: creating src/libcxx/Makefile</div><div>config.status:1052: creating examples/CXX/Makefile</div><div>config.status:1052: creating test/CXX/Makefile</div><div>config.status:1052: creating benchmarks/FLASH-IO/Makefile</div><div>config.status:1052: creating test/subfile/Makefile</div><div>config.status:1052: creating src/lib/ncconfig.h</div><div>config.status:1052: creating src/libf/nfconfig_inc</div><div><br></div><div>## ---------------- ##</div><div>## Cache variables. ##</div><div>## ---------------- ##</div><div><br></div><div>ac_cv_NFMPI_OFFSET=yes</div><div>ac_cv_build=x86_64-unknown-linux-gnu</div><div>ac_cv_c_bigendian=no</div><div>ac_cv_c_char_unsigned=no</div><div>ac_cv_c_compiler_gnu=yes</div><div>ac_cv_c_const=yes</div><div>ac_cv_c_ieeefloat=yes</div><div>ac_cv_c_inline=inline</div><div>ac_cv_cxx_compiler_gnu=yes</div><div>ac_cv_env_CCC_set=</div><div>ac_cv_env_CCC_value=</div><div>ac_cv_env_CC_set=</div><div>ac_cv_env_CC_value=</div><div>ac_cv_env_CFLAGS_set=</div><div>ac_cv_env_CFLAGS_value=</div><div>ac_cv_env_CPPFLAGS_set=</div><div>ac_cv_env_CPPFLAGS_value=</div><div>ac_cv_env_CPP_set=</div><div>ac_cv_env_CPP_value=</div><div>ac_cv_env_CXXFLAGS_set=</div><div>ac_cv_env_CXXFLAGS_value=</div><div>ac_cv_env_CXX_set=</div><div>ac_cv_env_CXX_value=</div><div>ac_cv_env_F77_set=</div><div>ac_cv_env_F77_value=</div><div>ac_cv_env_FCFLAGS_set=</div><div>ac_cv_env_FCFLAGS_value=</div><div>ac_cv_env_FC_set=</div><div>ac_cv_env_FC_value=</div><div>ac_cv_env_FFLAGS_set=</div><div>ac_cv_env_FFLAGS_value=</div><div>ac_cv_env_LDFLAGS_set=</div><div>ac_cv_env_LDFLAGS_value=</div><div>ac_cv_env_LIBS_set=</div><div>ac_cv_env_LIBS_value=</div><div>ac_cv_env_MPICC_set=set</div><div>ac_cv_env_MPICC_value=mpicc</div><div>ac_cv_env_MPICXX_set=set</div><div>ac_cv_env_MPICXX_value=mpicxx</div><div>ac_cv_env_MPIF77_set=set</div><div>ac_cv_env_MPIF77_value=mpif77</div><div>ac_cv_env_MPIF90_set=set</div><div>ac_cv_env_MPIF90_value=mpif90</div><div>ac_cv_env_RM_set=</div><div>ac_cv_env_RM_value=</div><div>ac_cv_env_TEST_MPIRUN_set=</div><div>ac_cv_env_TEST_MPIRUN_value=</div><div>ac_cv_env_TEST_OUTDIR_set=</div><div>ac_cv_env_TEST_OUTDIR_value=</div><div>ac_cv_env_TEST_SEQRUN_set=</div><div>ac_cv_env_TEST_SEQRUN_value=</div><div>ac_cv_env_build_alias_set=</div><div>ac_cv_env_build_alias_value=</div><div>ac_cv_env_host_alias_set=</div><div>ac_cv_env_host_alias_value=</div><div>ac_cv_env_target_alias_set=</div><div>ac_cv_env_target_alias_value=</div><div>ac_cv_f77_compiler_gnu=no</div><div>ac_cv_fc_compiler_gnu=no</div><div>ac_cv_fc_dummy_main=none</div><div>ac_cv_fc_fixedform=-fixed</div><div>ac_cv_fc_freeform=-FR</div><div>ac_cv_fc_libs=' -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl'</div><div>ac_cv_fc_mangling='lower case, underscore, no extra underscore'</div><div>ac_cv_fc_module_ext=mod</div><div>ac_cv_fc_module_flag=-I</div><div>ac_cv_fc_module_output_flag='-mod '</div><div>ac_cv_fc_pp_define=-D</div><div>ac_cv_fc_pp_srcext_F90=none</div><div>ac_cv_fc_pp_srcext_F=none</div><div>ac_cv_fc_srcext_f90=none</div><div>ac_cv_fc_srcext_f=none</div><div>ac_cv_fortran_dummy_main=none</div><div>ac_cv_func_MPI_Comm_rank=yes</div><div>ac_cv_func_MPI_File_close=yes</div><div>ac_cv_func_MPI_File_open=yes</div><div>ac_cv_func_MPI_Get_address=yes</div><div>ac_cv_func_MPI_Info_dup=yes</div><div>ac_cv_func_MPI_Info_free=yes</div><div>ac_cv_func_MPI_Type_create_hindexed=yes</div><div>ac_cv_func_MPI_Type_create_hvector=yes</div><div>ac_cv_func_MPI_Type_create_resized=yes</div><div>ac_cv_func_MPI_Type_create_struct=yes</div><div>ac_cv_func_MPI_Type_create_subarray=yes</div><div>ac_cv_func_MPI_Type_get_extent=yes</div><div>ac_cv_func_access=yes</div><div>ac_cv_func_strerror=yes</div><div>ac_cv_func_tdelete=yes</div><div>ac_cv_func_tsearch=yes</div><div>ac_cv_func_unlink=yes</div><div>ac_cv_header_inttypes_h=yes</div><div>ac_cv_header_malloc_h=yes</div><div>ac_cv_header_memory_h=yes</div><div>ac_cv_header_search_h=yes</div><div>ac_cv_header_stdbool_h=yes</div><div>ac_cv_header_stdc=yes</div><div>ac_cv_header_stdint_h=yes</div><div>ac_cv_header_stdlib_h=yes</div><div>ac_cv_header_string_h=yes</div><div>ac_cv_header_strings_h=yes</div><div>ac_cv_header_sys_stat_h=yes</div><div>ac_cv_header_sys_types_h=yes</div><div>ac_cv_header_unistd_h=yes</div><div>ac_cv_host=x86_64-unknown-linux-gnu</div><div>ac_cv_m4_stdout=</div><div>ac_cv_objext=o</div><div>ac_cv_path_DVIPDF=/usr/bin/dvipdf</div><div>ac_cv_path_EGREP='/bin/grep -E'</div><div>ac_cv_path_GREP=/bin/grep</div><div>ac_cv_path_LATEX=/usr/bin/latex</div><div>ac_cv_path_MPICC=/apps/mvapich2/2.1-intel/bin/mpicc</div><div>ac_cv_path_MPICXX=/apps/mvapich2/2.1-intel/bin/mpicxx</div><div>ac_cv_path_MPIF77=/apps/mvapich2/2.1-intel/bin/mpif77</div><div>ac_cv_path_MPIF90=/apps/mvapich2/2.1-intel/bin/mpif90</div><div>ac_cv_path_install='/usr/bin/install -c'</div><div>ac_cv_prog_AR=ar</div><div>ac_cv_prog_AWK=gawk</div><div>ac_cv_prog_CPP='/apps/mvapich2/2.1-intel/bin/mpicc -E'</div><div>ac_cv_prog_M4=m4</div><div>ac_cv_prog_NM=nm</div><div>ac_cv_prog_ac_ct_CC=/apps/mvapich2/2.1-intel/bin/mpicc</div><div>ac_cv_prog_ac_ct_RANLIB=ranlib</div><div>ac_cv_prog_cc_c89=</div><div>ac_cv_prog_cc_g=yes</div><div>ac_cv_prog_cxx_g=yes</div><div>ac_cv_prog_f77_g=yes</div><div>ac_cv_prog_f90_uppercase_mod=no</div><div>ac_cv_prog_fc_g=yes</div><div>ac_cv_prog_fc_v=-v</div><div>ac_cv_prog_make_make_set=yes</div><div>ac_cv_sizeof_MPI_Aint=8</div><div>ac_cv_sizeof_MPI_Offset=8</div><div>ac_cv_sizeof_double=8</div><div>ac_cv_sizeof_float=4</div><div>ac_cv_sizeof_int=4</div><div>ac_cv_sizeof_long=8</div><div>ac_cv_sizeof_long_long=8</div><div>ac_cv_sizeof_off_t=8</div><div>ac_cv_sizeof_short=2</div><div>ac_cv_sizeof_signed_char=1</div><div>ac_cv_sizeof_size_t=8</div><div>ac_cv_sizeof_uint=4</div><div>ac_cv_sizeof_unsigned_char=1</div><div>ac_cv_sizeof_unsigned_int=4</div><div>ac_cv_sizeof_unsigned_long_long=8</div><div>ac_cv_sizeof_unsigned_short=2</div><div>ac_cv_sizeof_ushort=2</div><div>ac_cv_sys_file_offset_bits=no</div><div>ac_cv_sys_largefile_CC=no</div><div>ac_cv_type_MPI_Offset=yes</div><div>ac_cv_type__Bool=yes</div><div>ac_cv_type_longlong=no</div><div>ac_cv_type_off_t=yes</div><div>ac_cv_type_ptrdiff_t=yes</div><div>ac_cv_type_signal=void</div><div>ac_cv_type_size_t=yes</div><div>ac_cv_type_ssize_t=yes</div><div>ac_cv_type_uchar=no</div><div>ac_cv_type_uint=yes</div><div>ac_cv_type_ulonglong=no</div><div>ac_cv_type_ushort=yes</div><div><br></div><div>## ----------------- ##</div><div>## Output variables. ##</div><div>## ----------------- ##</div><div><br></div><div>AR='ar'</div><div>ARFLAGS='cru'</div><div>AWK='gawk'</div><div>BUILDDIR='/home/admin/software/pnetcdf/parallel-netcdf-1.6.1-intel-mvapich2'</div><div>CC='/apps/mvapich2/2.1-intel/bin/mpicc'</div><div>CC_MAKEDEPEND='false'</div><div>CFLAGS='-g -O2'</div><div>CONFIGURE_ARGS_CLEAN='--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2'</div><div>CPP='/apps/mvapich2/2.1-intel/bin/mpicc -E'</div><div>CPPFLAGS=''</div><div>CXX='/apps/mvapich2/2.1-intel/bin/mpicxx'</div><div>CXXCPPFLAGS=''</div><div>CXXFLAGS='-g -O2'</div><div>DEFS='-DHAVE_CONFIG_H'</div><div>DVIPDF='/usr/bin/dvipdf'</div><div>ECHO_C=''</div><div>ECHO_N='-n'</div><div>ECHO_T=''</div><div>EGREP='/bin/grep -E'</div><div>EXEEXT=''</div><div>F77='/apps/mvapich2/2.1-intel/bin/mpif77'</div><div>F90FLAGS='-g'</div><div>F90LDFLAGS=''</div><div>F90LIBS=''</div><div>FC='/apps/mvapich2/2.1-intel/bin/mpif90'</div><div>FCFLAGS='-g'</div><div>FCFLAGS_F90=''</div><div>FCFLAGS_F=''</div><div>FCFLAGS_f90=''</div><div>FCFLAGS_f=''</div><div>FCLIBS=' -L/apps/mvapich2/2.1-intel/lib -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/debugger/lib/intel64 -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/intel/composer_xe_2015.3.187/mkl/lib/intel64/ -L/apps/intel/composer_xe_2015.3.187/compiler/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpifort -lmpi -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl'</div><div>FC_DEFINE='-D'</div><div>FC_MODEXT='mod'</div><div>FC_MODINC='-I'</div><div>FC_MODOUT='-mod ${ac_empty}'</div><div>FFIXEDFORMFLAG='-fixed'</div><div>FFLAGS='-g'</div><div>FFREEFORMFLAG='-FR'</div><div>FLDFLAGS=''</div><div>FLIBS=''</div><div>FPP=''</div><div>FPPFLAGS=''</div><div>GREP='/bin/grep'</div><div>INOUT='INOUT'</div><div>INSTALL_DATA='${INSTALL} -m 644'</div><div>INSTALL_PROGRAM='${INSTALL}'</div><div>INSTALL_SCRIPT='${INSTALL}'</div><div>LATEX='/usr/bin/latex'</div><div>LCOV_LIB=''</div><div>LDFLAGS=''</div><div>LIBOBJS=''</div><div>LIBS=''</div><div>LN_S='ln -s'</div><div>LTLIBOBJS=''</div><div>M4='m4'</div><div>M4FLAGS=''</div><div>MAKEWHATIS_CMD=''</div><div>MPICC='/apps/mvapich2/2.1-intel/bin/mpicc'</div><div>MPICXX='/apps/mvapich2/2.1-intel/bin/mpicxx'</div><div>MPIF77='/apps/mvapich2/2.1-intel/bin/mpif77'</div><div>MPIF90='/apps/mvapich2/2.1-intel/bin/mpif90'</div><div>NM='nm'</div><div>NMFLAGS=''</div><div>OBJEXT='o'</div><div>PACKAGE_BUGREPORT='<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>'</div><div>PACKAGE_NAME='parallel-netcdf'</div><div>PACKAGE_STRING='parallel-netcdf 1.6.1'</div><div>PACKAGE_TARNAME='parallel-netcdf'</div><div>PACKAGE_URL=''</div><div>PACKAGE_VERSION='1.6.1'</div><div>PATH_SEPARATOR=':'</div><div>PNETCDF_INC='/home/admin/software/pnetcdf/parallel-netcdf-1.6.1-intel-mvapich2/src/libf90'</div><div>PNETCDF_LIB='-L/home/admin/software/pnetcdf/parallel-netcdf-1.6.1-intel-mvapich2/src/lib'</div><div>PNETCDF_RELEASE_DATE2='2015-06-01'</div><div>PNETCDF_RELEASE_DATE='01 Jun 2015'</div><div>PNETCDF_VERSION='1.6.1'</div><div>PNETCDF_VERSION_MAJOR='1'</div><div>PNETCDF_VERSION_MINOR='6'</div><div>PNETCDF_VERSION_PRE=''</div><div>PNETCDF_VERSION_SUB='1'</div><div>RANLIB='ranlib'</div><div>RM='rm'</div><div>SET_MAKE=''</div><div>SHELL='/bin/sh'</div><div>SIZEOF_MPI_OFFSET='8'</div><div>TEST_MPIRUN='mpiexec -n NP'</div><div>TEST_OUTDIR='.'</div><div>TEST_SEQRUN=''</div><div>UPPER_CASE_MOD='no'</div><div>WHATIS='whatis'</div><div>ac_ct_CC='/apps/mvapich2/2.1-intel/bin/mpicc'</div><div>ac_ct_CXX=''</div><div>ac_ct_F77=''</div><div>ac_ct_FC=''</div><div>ac_empty=''</div><div>bindir='${exec_prefix}/bin'</div><div>build='x86_64-unknown-linux-gnu'</div><div>build_alias=''</div><div>build_cpu='x86_64'</div><div>build_os='linux-gnu'</div><div>build_vendor='unknown'</div><div>datadir='${datarootdir}'</div><div>datarootdir='${prefix}/share'</div><div>docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'</div><div>dvidir='${docdir}'</div><div>enable_subfiling='yes'</div><div>exec_prefix='${prefix}'</div><div>has_fortran='yes'</div><div>has_latex='yes'</div><div>has_mpicxx='yes'</div><div>have_yacc_lex='no'</div><div>host='x86_64-unknown-linux-gnu'</div><div>host_alias=''</div><div>host_cpu='x86_64'</div><div>host_os='linux-gnu'</div><div>host_vendor='unknown'</div><div>htmldir='${docdir}'</div><div>includedir='${prefix}/include'</div><div>infodir='${datarootdir}/info'</div><div>is_bigendian='no'</div><div>large_file_test='no'</div><div>libdir='${exec_prefix}/lib'</div><div>libexecdir='${exec_prefix}/libexec'</div><div>localedir='${datarootdir}/locale'</div><div>localstatedir='${prefix}/var'</div><div>mandir='${datarootdir}/man'</div><div>oldincludedir='/usr/include'</div><div>pdfdir='${docdir}'</div><div>prefix='/apps/pnetcdf/1.6.1-intel-mvapich2'</div><div>prog=''</div><div>program_transform_name='s,x,x,'</div><div>psdir='${docdir}'</div><div>rm_cmd=''</div><div>sbindir='${exec_prefix}/sbin'</div><div>sharedstatedir='${prefix}/com'</div><div>sysconfdir='${prefix}/etc'</div><div>target_alias=''</div><div><br></div><div>## ----------- ##</div><div>## confdefs.h. ##</div><div>## ----------- ##</div><div><br></div><div>/* confdefs.h */</div><div>#define PACKAGE_NAME "parallel-netcdf"</div><div>#define PACKAGE_TARNAME "parallel-netcdf"</div><div>#define PACKAGE_VERSION "1.6.1"</div><div>#define PACKAGE_STRING "parallel-netcdf 1.6.1"</div><div>#define PACKAGE_BUGREPORT "<a href="mailto:parallel-netcdf@mcs.anl.gov">parallel-netcdf@mcs.anl.gov</a>"</div><div>#define PACKAGE_URL ""</div><div>#define PNETCDF_VERSION_MAJOR 1</div><div>#define PNETCDF_VERSION_MINOR 6</div><div>#define PNETCDF_VERSION_SUB 1</div><div>#define PNETCDF_VERSION_PRE</div><div>#define PNETCDF_VERSION "1.6.1"</div><div>#define PNETCDF_RELEASE_DATE "01 Jun 2015"</div><div>#define CONFIGURE_ARGS_CLEAN "--prefix=/apps/pnetcdf/1.6.1-intel-mvapich2"</div><div>#define STDC_HEADERS 1</div><div>#define HAVE_SYS_TYPES_H 1</div><div>#define HAVE_SYS_STAT_H 1</div><div>#define HAVE_STDLIB_H 1</div><div>#define HAVE_STRING_H 1</div><div>#define HAVE_MEMORY_H 1</div><div>#define HAVE_STRINGS_H 1</div><div>#define HAVE_INTTYPES_H 1</div><div>#define HAVE_STDINT_H 1</div><div>#define HAVE_UNISTD_H 1</div><div>#define HAVE_MALLOC_H 1</div><div>#define F77_NAME_LOWER_USCORE /**/</div><div>#define HAVE__BOOL 1</div><div>#define HAVE_STDBOOL_H 1</div><div>#define HAVE_STRERROR 1</div><div>#define HAVE_ACCESS 1</div><div>#define HAVE_UNLINK 1</div><div>#define HAVE_SEARCH_H 1</div><div>#define HAVE_TSEARCH 1</div><div>#define HAVE_TDELETE 1</div><div>#define SIZEOF_MPI_OFFSET 8</div><div>#define SIZEOF_MPI_AINT 8</div><div>#define ENABLE_CDF5 /**/</div><div>#define ENABLE_NONBLOCKING /**/</div><div>#define HAVE_MPI_INFO_DUP 1</div><div>#define HAVE_MPI_INFO_FREE 1</div><div>#define HAVE_MPI_GET_ADDRESS 1</div><div>#define HAVE_MPI_TYPE_CREATE_SUBARRAY 1</div><div>#define HAVE_MPI_TYPE_CREATE_HVECTOR 1</div><div>#define HAVE_MPI_TYPE_CREATE_HINDEXED 1</div><div>#define HAVE_MPI_TYPE_CREATE_STRUCT 1</div><div>#define HAVE_MPI_TYPE_CREATE_RESIZED 1</div><div>#define HAVE_MPI_TYPE_GET_EXTENT 1</div><div>#define HAVE_MPI_COMBINER_DUP 1</div><div>#define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1</div><div>#define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1</div><div>#define HAVE_MPI_COMBINER_SUBARRAY 1</div><div>#define HAVE_MPI_COMBINER_DARRAY 1</div><div>#define HAVE_MPI_COMBINER_RESIZED 1</div><div>#define HAVE_MPI_COMBINER_STRUCT_INTEGER 1</div><div>#define HAVE_MPI_COMBINER_INDEXED_BLOCK 1</div><div>#define HAVE_MPI_COMBINER_F90_REAL 1</div><div>#define HAVE_MPI_COMBINER_F90_INTEGER 1</div><div>#define HAVE_MPI_COMBINER_F90_COMPLEX 1</div><div>#define HAVE_MPI_ERR_FILE_EXISTS 1</div><div>#define HAVE_MPI_ERR_NO_SUCH_FILE 1</div><div>#define HAVE_MPI_ERR_AMODE 1</div><div>#define HAVE_MPI_ERR_NOT_SAME 1</div><div>#define HAVE_MPI_ERR_BAD_FILE 1</div><div>#define HAVE_MPI_ERR_READ_ONLY 1</div><div>#define HAVE_MPI_ERR_ACCESS 1</div><div>#define HAVE_MPI_ERR_NO_SPACE 1</div><div>#define HAVE_MPI_ERR_QUOTA 1</div><div>#define HAVE_MPI_CHAR 1</div><div>#define HAVE_MPI_BYTE 1</div><div>#define HAVE_MPI_UNSIGNED_CHAR 1</div><div>#define HAVE_MPI_SHORT 1</div><div>#define HAVE_MPI_UNSIGNED_SHORT 1</div><div>#define HAVE_MPI_INT 1</div><div>#define HAVE_MPI_UNSIGNED 1</div><div>#define HAVE_MPI_LONG 1</div><div>#define HAVE_MPI_FLOAT 1</div><div>#define HAVE_MPI_DOUBLE 1</div><div>#define HAVE_MPI_LONG_LONG_INT 1</div><div>#define HAVE_MPI_UNSIGNED_LONG_LONG 1</div><div>#define HAVE_MPI_UB 1</div><div>#define HAVE_MPI_LB 1</div><div>#define HAVE_MPI_OFFSET_DATATYPE 1</div><div>#define HAVE_MPI_CHARACTER 1</div><div>#define HAVE_MPI_REAL 1</div><div>#define HAVE_MPI_INTEGER 1</div><div>#define HAVE_MPI_DOUBLE_PRECISION 1</div><div>#define HAVE_MPI_INTEGER1 1</div><div>#define HAVE_MPI_INTEGER2 1</div><div>#define HAVE_MPI_INTEGER4 1</div><div>#define HAVE_MPI_INTEGER8 1</div><div>#define HAVE_MPI_INTEGER16 1</div><div>#define HAVE_MPI_REAL4 1</div><div>#define HAVE_MPI_REAL8 1</div><div>#define HAVE_MPI_REAL16 1</div><div>#define HAVE_MPI_COMPLEX8 1</div><div>#define HAVE_MPI_COMPLEX16 1</div><div>#define HAVE_MPI_COMPLEX32 1</div><div>#define RETSIGTYPE void</div><div>#define HAVE_SSIZE_T 1</div><div>#define HAVE_PTRDIFF_T 1</div><div>#define HAVE_USHORT 1</div><div>#define HAVE_UINT 1</div><div>#define SIZEOF_SIZE_T 8</div><div>#define SIZEOF_OFF_T 8</div><div>#define SIZEOF_SIGNED_CHAR 1</div><div>#define SIZEOF_UNSIGNED_CHAR 1</div><div>#define SIZEOF_SHORT 2</div><div>#define SIZEOF_UNSIGNED_SHORT 2</div><div>#define SIZEOF_INT 4</div><div>#define SIZEOF_UNSIGNED_INT 4</div><div>#define SIZEOF_LONG 8</div><div>#define SIZEOF_FLOAT 4</div><div>#define SIZEOF_DOUBLE 8</div><div>#define SIZEOF_LONG_LONG 8</div><div>#define SIZEOF_UNSIGNED_LONG_LONG 8</div><div>#define SIZEOF_USHORT 2</div><div>#define SIZEOF_UINT 4</div><div>#define NF_INT1_T integer*1</div><div>#define NF_INT2_T integer*2</div><div>#define NF_INT8_T integer*8</div><div>#define NF_INT1_IS_C_SIGNED_CHAR 1</div><div>#define NF_INT2_IS_C_SHORT 1</div><div>#define NF_INT8_IS_C_LONG 1</div><div>#define NF_INT_IS_C_INT 1</div><div>#define NF_REAL_IS_C_FLOAT 1</div><div>#define NF_DOUBLEPRECISION_IS_C_DOUBLE 1</div><div>#define NCBYTE_T byte</div><div>#define NCSHORT_T integer*2</div><div>#define ENABLE_SUBFILING 1</div><div><br></div><div>configure: exit 0</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Sep 18, 2015 at 4:15 PM, Wei-keng Liao <span dir="ltr"><<a href="mailto:wkliao@eecs.northwestern.edu" target="_blank">wkliao@eecs.northwestern.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi, Craig<br>
<br>
Could you send us your config.log file?<br>
<span class="HOEnZb"><font color="#888888"><br>
Wei-keng<br>
</font></span><div class="HOEnZb"><div class="h5"><br>
On Sep 18, 2015, at 4:57 PM, Craig Tierney - NOAA Affiliate wrote:<br>
<br>
> Hello,<br>
><br>
> I am trying to build Pnetcdf 1.6.1 with Intel 15.0.3.048 and Mvapich2 2.1. I am getting some failures in the tests. I so far am getting 4 failures. The flash-io test fails and the make process exits. When I build Pnetcdf 1.6.1 with Intel 15.0.3.048 and Intel MPI 5.1.1.109, all tests complete cleanly.<br>
><br>
> Are there known issues with Pnetcdf 1.6.1 and Mvapich2 2.1?<br>
><br>
> Thanks,<br>
> Craig<br>
><br>
> ---------------<br>
> ./nc_test -d /lfs3/jetmgmt/Craig.Tierney<br>
><br>
> FAILURE at line 112 of test_read.c: ncmpi_open of non-netCDF file: status = -220<br>
> ### 1 FAILURES TESTING test_ncmpi_open! Stop ... ###<br>
><br>
> ./nc_test: expects 0 failures ... Total number of failures: 1<br>
> *** TESTING C ./nc_test for format CDF-1 ------ failed<br>
><br>
> --------------<br>
> And:<br>
><br>
> -------------<br>
> *** TESTING C ./varn_int for ncmpi_put_varn_int_all() ------ pass<br>
> Error: expect error code -220 but got -51<br>
> Error: expect error code -220 but got -51<br>
> Error: expect error code -220 but got -51<br>
> Error: expect error code -220 but got -51<br>
> *** TESTING C ./modes for file create/open modes ------ failed<br>
> *** TESTING C ./one_record for only one record variable ------ pass<br>
><br>
> ----------------<br>
><br>
> Also:<br>
><br>
> ---------------<br>
> Error at line=71: NetCDF: Not a valid ID<br>
> Error at line=72: NetCDF: Not a valid ID<br>
> Error at line=69: NetCDF: Not a valid ID<br>
> Error at line=71: NetCDF: Not a valid ID<br>
> Error at line=72: NetCDF: Not a valid ID<br>
> *** TESTING C ./wait_after_indep for ncmpi_end_indep_data ------ fail<br>
><br>
> ----------<br>
> Lastly:<br>
><br>
> make -w -C FLASH-IO ptest<br>
> make[2]: Entering directory `/misc/whome/admin/software/pnetcdf/parallel-netcdf-1.6.1-intel-mvapich2/benchmarks/FLASH-IO'<br>
> mpiexec.hydra -np 4 ./flash_benchmark_io /lfs3/jetmgmt/Craig.Tierney/flash_io_test_<br>
> nfmpi_enddef<br>
> (Internal error) beginning file offset of this variable is inconsistent among p<br>
> r<br>
> nfmpi_enddef<br>
> (Internal error) beginning file offset of this variable is inconsistent among p<br>
> r<br>
> nfmpi_enddef<br>
> (Internal error) beginning file offset of this variable is inconsistent among p<br>
> r<br>
> [cli_1]: aborting job:<br>
> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 1<br>
> [cli_2]: aborting job:<br>
> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 2<br>
> [cli_3]: aborting job:<br>
> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 3<br>
><br>
> ===================================================================================<br>
> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES<br>
> = PID 9284 RUNNING AT fe1<br>
> = EXIT CODE: 255<br>
> = CLEANING UP REMAINING PROCESSES<br>
> = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES<br>
> ===================================================================================<br>
> make[2]: *** [ptest] Error 255<br>
<br>
</div></div></blockquote></div><br></div>