This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by parallel-netcdf configure 1.6.1, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB ## --------- ## ## Platform. ## ## --------- ## hostname = weather.jnu.ac.in uname -m = x86_64 uname -r = 2.6.32-279.14.1.el6.x86_64 uname -s = Linux uname -v = #1 SMP Tue Nov 6 23:43:09 UTC 2012 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /export/home/dkumar/RLIB/bin PATH: /opt/intel/impi/4.1.0.024/intel64/bin PATH: /opt/intel/impi/4.1.0.024/intel64/bin PATH: /opt/intel/impi/4.1.0.024/intel64/bin PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/mpirt/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64_mic PATH: /opt/intel/composer_xe_2013.1.117/debugger/gui/intel64 PATH: /opt/intel/impi/4.1.0.024/intel64/bin PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/mpirt/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64_mic PATH: /opt/intel/composer_xe_2013.1.117/debugger/gui/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/impi/4.1.0.024/intel64/bin PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/mpirt/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64_mic PATH: /opt/intel/composer_xe_2013.1.117/debugger/gui/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/mpirt/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64 PATH: /opt/intel/composer_xe_2013.1.117/bin/intel64_mic PATH: /opt/intel/composer_xe_2013.1.117/debugger/gui/intel64 PATH: /opt/openmpi/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /opt/bio/ncbi/bin PATH: /opt/bio/mpiblast/bin PATH: /opt/bio/EMBOSS/bin PATH: /opt/bio/clustalw/bin PATH: /opt/bio/tcoffee/bin PATH: /opt/bio/hmmer/bin PATH: /opt/bio/phylip/exe PATH: /opt/bio/mrbayes PATH: /opt/bio/fasta PATH: /opt/bio/glimmer/bin PATH: /opt/bio/glimmer/scripts PATH: /opt/bio/gromacs/bin PATH: /opt/bio/gmap/bin PATH: /opt/bio/tigr/bin PATH: /opt/bio/autodocksuite/bin PATH: /opt/bio/wgs/bin PATH: /opt/eclipse PATH: /opt/ganglia/bin PATH: /opt/ganglia/sbin PATH: /usr/java/latest/bin PATH: /opt/maven/bin PATH: /opt/pdsh/bin PATH: /opt/rocks/bin PATH: /opt/rocks/sbin PATH: /opt/condor/bin PATH: /opt/condor/sbin PATH: /opt/gridengine/bin/linux-x64 PATH: /opt/apps/hdf5-1.8.5/bin PATH: /opt/apps/netcdf-4.1.2/bin PATH: /opt/apps/NETCDF/intel-netcdf/bin PATH: /opt/apps/JASPER/intel-jasper/bin PATH: /opt/apps/LIBPNG/intel-libpng/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /sbin PATH: /opt/apps/hdf5-1.8.5/bin PATH: /opt/apps/netcdf-4.1.2/bin PATH: /opt/apps/NETCDF/intel-netcdf/bin PATH: /opt/apps/JASPER/intel-jasper/bin PATH: /opt/apps/LIBPNG/intel-libpng/bin PATH: /home/dkumar/bin/ PATH: /export/home/dkumar/RLIB/bin/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:3229: checking for mpiicc configure:3247: found /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc configure:3259: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc configure:3386: checking for gcc configure:3413: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc configure:3642: checking for C compiler version configure:3651: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc --version >&5 icc (ICC) 13.0.1 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:3662: $? = 0 configure:3651: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -v >&5 mpiicc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. icc version 13.0.1 (gcc version 4.4.6 compatibility) configure:3662: $? = 0 configure:3651: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -V >&5 Intel(R) C Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 13.0.1.117 Build 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:3662: $? = 0 configure:3651: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:3662: $? = 1 configure:3682: checking whether the C compiler works configure:3704: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:3708: $? = 0 configure:3756: result: yes configure:3759: checking for C compiler default output file name configure:3761: result: a.out configure:3767: checking for suffix of executables configure:3774: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:3778: $? = 0 configure:3800: result: configure:3822: checking whether we are cross compiling configure:3830: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:3834: $? = 0 configure:3841: ./conftest configure:3845: $? = 0 configure:3860: result: no configure:3865: checking for suffix of object files configure:3887: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:3891: $? = 0 configure:3912: result: o configure:3916: checking whether we are using the GNU C compiler configure:3935: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:3935: $? = 0 configure:3944: result: yes configure:3953: checking whether /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc accepts -g configure:3973: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -g conftest.c >&5 configure:3973: $? = 0 configure:4014: result: yes configure:4031: checking for /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc option to accept ISO C89 configure:4094: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4094: $? = 0 configure:4107: result: none needed configure:4137: checking for special C compiler options needed for large files configure:4182: result: no configure:4188: checking for _FILE_OFFSET_BITS value needed for large files configure:4213: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4213: $? = 0 configure:4245: result: no configure:4332: checking how to make dependencies configure:4367: result: false configure:4377: checking how to run the C preprocessor configure:4408: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c configure:4408: $? = 0 configure:4422: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c conftest.c(16): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:4422: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | /* end confdefs.h. */ | #include configure:4447: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E configure:4467: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c configure:4467: $? = 0 configure:4481: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c conftest.c(16): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:4481: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | /* end confdefs.h. */ | #include configure:4510: checking for grep that handles long lines and -e configure:4568: result: /bin/grep configure:4573: checking for egrep configure:4635: result: /bin/grep -E configure:4640: checking for ANSI C header files configure:4660: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4660: $? = 0 configure:4733: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:4733: $? = 0 configure:4733: ./conftest configure:4733: $? = 0 configure:4744: result: yes configure:4757: checking for sys/types.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for sys/stat.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for stdlib.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for string.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for memory.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for strings.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for inttypes.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for stdint.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4757: checking for unistd.h configure:4757: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4757: $? = 0 configure:4757: result: yes configure:4771: checking malloc.h usability configure:4771: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:4771: $? = 0 configure:4771: result: yes configure:4771: checking malloc.h presence configure:4771: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c configure:4771: $? = 0 configure:4771: result: yes configure:4771: checking for malloc.h configure:4771: result: yes configure:4783: checking for MPI_Comm_rank configure:4783: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:4783: $? = 0 configure:4783: result: yes configure:4866: checking for MPI_File_open configure:4866: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:4866: $? = 0 configure:4866: result: yes configure:5127: checking for mpiicpc configure:5145: found /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc configure:5157: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc configure:5350: checking for C++ compiler version configure:5359: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc --version >&5 icpc (ICC) 13.0.1 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:5370: $? = 0 configure:5359: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -v >&5 mpiicpc for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. icpc version 13.0.1 (gcc version 4.4.6 compatibility) configure:5370: $? = 0 configure:5359: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -V >&5 Intel(R) C++ Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 13.0.1.117 Build 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:5370: $? = 0 configure:5359: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -qversion >&5 icpc: command line warning #10006: ignoring unknown option '-qversion' /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:5370: $? = 1 configure:5374: checking whether we are using the GNU C++ compiler configure:5393: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -c -O3 -xHost -axSSE4.2 -fPIC conftest.cpp >&5 configure:5393: $? = 0 configure:5402: result: yes configure:5411: checking whether /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc accepts -g configure:5431: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -c -g conftest.cpp >&5 configure:5431: $? = 0 configure:5472: result: yes configure:5504: checking for MPI_File_close configure:5504: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.cpp >&5 icpc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:5504: $? = 0 configure:5504: result: yes configure:5804: checking for mpiifort configure:5822: found /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:5834: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:6081: checking for mpiifort configure:6099: found /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:6111: result: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:6301: checking for Fortran compiler version configure:6310: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort --version >&5 ifort (IFORT) 13.0.1 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:6321: $? = 0 configure:6310: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -v >&5 mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. ifort version 13.0.1 configure:6321: $? = 0 configure:6310: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -V >&5 Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 13.0.1.117 Build 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. FOR NON-COMMERCIAL USE ONLY configure:6321: $? = 0 configure:6310: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -qversion >&5 ifort: command line warning #10006: ignoring unknown option '-qversion' /opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/for_main.o: In function `main': /export/users/nbtester/efi2linux_nightly/branch-13_0/20121011_000000/libdev/frtl/src/libfor/for_main.c:(.text+0x38): undefined reference to `MAIN__' configure:6321: $? = 1 configure:6330: checking whether we are using the GNU Fortran compiler configure:6343: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = => choke me ---------------^ conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors. choke me ---------------^ compilation aborted for conftest.F (code 1) configure:6343: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6352: result: no configure:6358: checking whether /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort accepts -g configure:6369: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -g conftest.f >&5 configure:6369: $? = 0 configure:6377: result: yes configure:6412: checking for Fortran flag to compile preprocessed .F files configure:6437: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F >&5 configure:6437: $? = 0 configure:6447: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F >&5 conftest.F(4): #error: can't find include file: ac_nonexistent.h configure:6447: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:6460: result: none configure:6486: checking for Fortran flag to compile preprocessed .F90 files configure:6511: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F90 >&5 configure:6511: $? = 0 configure:6521: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F90 >&5 conftest.F90(4): #error: can't find include file: ac_nonexistent.h configure:6521: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:6534: result: none configure:6573: checking for Fortran flag to compile preprocessed .F files configure:6621: result: none configure:6643: checking how to define symbols for preprocessed Fortran configure:6665: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -DFOOBAR -DZORK=42 conftest.F >&5 configure:6665: $? = 0 configure:6674: result: -D configure:6701: checking for Fortran flag to compile .f90 files configure:6721: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f90 >&5 configure:6721: $? = 0 configure:6730: result: none configure:6757: checking for Fortran flag needed to accept fixed-form source configure:6774: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f90 >&5 conftest.f90(2): error #5082: Syntax error, found IDENTIFIER 'THIS' when expecting one of: ( % [ : . = => C This comment should confuse free-form compilers. ------^ compilation aborted for conftest.f90 (code 1) configure:6774: $? = 1 configure: failed program was: | | C This comment should confuse free-form compilers. | program main | end configure:6774: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -ffixed-form conftest.f90 >&5 ifort: command line warning #10006: ignoring unknown option '-ffixed-form' conftest.f90(2): error #5082: Syntax error, found IDENTIFIER 'THIS' when expecting one of: ( % [ : . = => C This comment should confuse free-form compilers. ------^ compilation aborted for conftest.f90 (code 1) configure:6774: $? = 1 configure: failed program was: | | C This comment should confuse free-form compilers. | program main | end configure:6774: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -fixed conftest.f90 >&5 configure:6774: $? = 0 configure:6783: result: -fixed configure:6813: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f90 >&5 configure:6813: $? = 0 configure:6824: checking for Fortran flag to compile .f files configure:6844: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:6844: $? = 0 configure:6853: result: none configure:6999: checking for Fortran 77 compiler version configure:7008: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort --version >&5 ifort (IFORT) 13.0.1 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. configure:7019: $? = 0 configure:7008: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -v >&5 mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. ifort version 13.0.1 configure:7019: $? = 0 configure:7008: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -V >&5 Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 13.0.1.117 Build 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. FOR NON-COMMERCIAL USE ONLY configure:7019: $? = 0 configure:7008: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -qversion >&5 ifort: command line warning #10006: ignoring unknown option '-qversion' /opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/for_main.o: In function `main': /export/users/nbtester/efi2linux_nightly/branch-13_0/20121011_000000/libdev/frtl/src/libfor/for_main.c:(.text+0x38): undefined reference to `MAIN__' configure:7019: $? = 1 configure:7028: checking whether we are using the GNU Fortran 77 compiler configure:7041: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = => choke me ---------------^ conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors. choke me ---------------^ compilation aborted for conftest.F (code 1) configure:7041: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:7050: result: no configure:7056: checking whether /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort accepts -g configure:7067: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -g conftest.f >&5 configure:7067: $? = 0 configure:7075: result: yes configure:7111: checking for Fortran flag needed to accept free-form source configure:7130: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 conftest.f(2): error #5149: Illegal character in statement label field [p] program freeform --^ conftest.f(2): error #5149: Illegal character in statement label field [r] program freeform ---^ conftest.f(2): error #5149: Illegal character in statement label field [o] program freeform ----^ conftest.f(2): error #5118: First statement in file must not be continued program freeform -----^ conftest.f(2): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = => program freeform ------------------^ conftest.f(4): error #5082: Syntax error, found '&' when expecting one of: ( ... print *, 'Hello ', & --------------------------^ conftest.f(5): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( 'world.' ------------------^ conftest.f(5): error #6235: Executable statements are invalid within the BLOCK DATA unit. 'world.' ----------^ compilation aborted for conftest.f (code 1) configure:7130: $? = 1 configure: failed program was: | | program freeform | ! FIXME: how to best confuse non-freeform compilers? | print *, 'Hello ', & | 'world.' | end configure:7130: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -ffree-form conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-ffree-form' conftest.f(2): error #5149: Illegal character in statement label field [p] program freeform --^ conftest.f(2): error #5149: Illegal character in statement label field [r] program freeform ---^ conftest.f(2): error #5149: Illegal character in statement label field [o] program freeform ----^ conftest.f(2): error #5118: First statement in file must not be continued program freeform -----^ conftest.f(2): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % [ : . = => program freeform ------------------^ conftest.f(4): error #5082: Syntax error, found '&' when expecting one of: ( ... print *, 'Hello ', & --------------------------^ conftest.f(5): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( 'world.' ------------------^ conftest.f(5): error #6235: Executable statements are invalid within the BLOCK DATA unit. 'world.' ----------^ compilation aborted for conftest.f (code 1) configure:7130: $? = 1 configure: failed program was: | | program freeform | ! FIXME: how to best confuse non-freeform compilers? | print *, 'Hello ', & | 'world.' | end configure:7130: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -FR conftest.f >&5 configure:7130: $? = 0 configure:7139: result: -FR configure:7177: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:7177: $? = 0 configure:7231: checking build system type configure:7245: result: x86_64-unknown-linux-gnu configure:7265: checking host system type configure:7278: result: x86_64-unknown-linux-gnu configure:7302: checking how to get verbose linking output from /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:7312: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:7312: $? = 0 configure:7330: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC -v -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.f mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type ifort version 13.0.1 /opt/intel/composer_xe_2013.1.117/bin/intel64/fortcom -D__INTEL_COMPILER=1300 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 -D__x86_64__ -D_MT -D__INTEL_COMPILER_BUILD_DATE=20121010 -D__PIC__ -D__pic__ -D__INTEL_OFFLOAD -D__pentium4 -D__pentium4__ -D__tune_pentium4__ -D__SSE2__ -D__SSE3__ -D__SSSE3__ -D__SSE4_1__ -D__SSE4_2__ -D__SSE__ -D__MMX__ -D__AVX__ -mGLOB_pack_sort_init_list -I. -I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/compiler/include/intel64 -I/opt/intel/composer_xe_2013.1.117/compiler/include -I/usr/local/include -I/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include -I/usr/include -O3 -simd -offload_host -mP1OPT_version=13.0-intel64 -mGLOB_diag_file=/tmp/iforth2jsAt.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mGLOB_tune_for_fort -mGLOB_use_fort_dope_vector -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=446 "-mGLOB_options_string=-I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/impi/4.1.0.024/intel64/include -ldl -o conftest -O3 -xHost -axSSE4.2 -fPIC -v -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic -L/opt/intel/impi/4.1.0.024/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /opt/intel/impi/4.1.0.024/intel64/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpi -lmpigf -lmpigi -lrt -lpthread" -mGLOB_position_independent_code -mGLOB_preemption_model=3 -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/opt/intel/composer_xe_2013.1.117/bin/intel64 -mGLOB_as_output_backup_file_name=/tmp/ifortFaInBuas_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_machine_model=GLOB_MACHINE_MODEL_EFI2 -mGLOB_product_id_code=0x22006d91 -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x800 -mGLOB_advanced_optim=TRUE -mGLOB_specialized_instructions=0x400 -mIPOPT_auto_cpu_activate -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mP2OPT_il0_array_sections=TRUE -mP2OPT_offload_unique_var_string=ifort1560247568nblCFs -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/opt/intel/composer_xe_2013.1.117/bin/intel64/libiml_attr.so -mIPOPT_obj_output_file_name=/tmp/iforth2jsAt.o -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchbc1CSu "-mGLOB_linker_version=2.20.51.0.2-5.34.el6 20100205" -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/tmp/iforttempfileRj33rv -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/tmp/iforth2jsAt.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f #include "..." search starts here: #include <...> search starts here: . /opt/intel/impi/4.1.0.024/intel64/include /opt/intel/impi/4.1.0.024/intel64/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/compiler/include/intel64 /opt/intel/composer_xe_2013.1.117/compiler/include /usr/local/include /usr/lib/gcc/x86_64-redhat-linux/4.4.6/include /usr/include End of search list. ld /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/crtbegin.o --eh-frame-hdr --build-id -dynamic-linker /lib64/ld-linux-x86-64.so.2 -L/opt/intel/impi/4.1.0.024/intel64/lib -o conftest /opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/for_main.o -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -rpath=/export/home/dkumar/RLIB/lib /tmp/iforth2jsAt.o --enable-new-dtags -rpath /opt/intel/impi/4.1.0.024/intel64/lib -rpath /opt/intel/mpi-rt/4.1 -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lpthread -lsvml -lc -lgcc -lgcc_s -lirc_s -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/4.4.6/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crtn.o configure:7413: result: -v configure:7415: checking for Fortran libraries of /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort configure:7438: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC -v -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.f mpiifort for the Intel(R) MPI Library 4.1 for Linux* Copyright(C) 2003-2012, Intel Corporation. All rights reserved. ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type ifort version 13.0.1 /opt/intel/composer_xe_2013.1.117/bin/intel64/fortcom -D__INTEL_COMPILER=1300 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__ELF__ -D__x86_64 -D__x86_64__ -D_MT -D__INTEL_COMPILER_BUILD_DATE=20121010 -D__PIC__ -D__pic__ -D__INTEL_OFFLOAD -D__pentium4 -D__pentium4__ -D__tune_pentium4__ -D__SSE2__ -D__SSE3__ -D__SSSE3__ -D__SSE4_1__ -D__SSE4_2__ -D__SSE__ -D__MMX__ -D__AVX__ -mGLOB_pack_sort_init_list -I. -I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/mkl/include -I/opt/intel/composer_xe_2013.1.117/tbb/include -I/opt/intel/composer_xe_2013.1.117/compiler/include/intel64 -I/opt/intel/composer_xe_2013.1.117/compiler/include -I/usr/local/include -I/usr/lib/gcc/x86_64-redhat-linux/4.4.6/include -I/usr/include -O3 -simd -offload_host -mP1OPT_version=13.0-intel64 -mGLOB_diag_file=/tmp/ifortYyjtSI.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mGLOB_tune_for_fort -mGLOB_use_fort_dope_vector -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE -mGLOB_gcc_version=446 "-mGLOB_options_string=-I/opt/intel/impi/4.1.0.024/intel64/include -I/opt/intel/impi/4.1.0.024/intel64/include -ldl -o conftest -O3 -xHost -axSSE4.2 -fPIC -v -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic -L/opt/intel/impi/4.1.0.024/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /opt/intel/impi/4.1.0.024/intel64/lib -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/4.1 -lmpi -lmpigf -lmpigi -lrt -lpthread" -mGLOB_position_independent_code -mGLOB_preemption_model=3 -mGLOB_cxx_limited_range=FALSE -mCG_extend_parms=FALSE -mGLOB_compiler_bin_directory=/opt/intel/composer_xe_2013.1.117/bin/intel64 -mGLOB_as_output_backup_file_name=/tmp/iforty5Fd1Las_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_machine_model=GLOB_MACHINE_MODEL_EFI2 -mGLOB_product_id_code=0x22006d91 -mCG_bnl_movbe=T -mGLOB_extended_instructions=0x800 -mGLOB_advanced_optim=TRUE -mGLOB_specialized_instructions=0x400 -mIPOPT_auto_cpu_activate -mP3OPT_use_mspp_call_convention -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mPGOPTI_value_profile_use=T -mP2OPT_il0_array_sections=TRUE -mP2OPT_offload_unique_var_string=ifort974344485AkRRPF -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mP2OPT_hpo_rtt_control=0 -mIPOPT_args_in_regs=0 -mP2OPT_disam_assume_nonstd_intent_in=FALSE -mGLOB_imf_mapping_library=/opt/intel/composer_xe_2013.1.117/bin/intel64/libiml_attr.so -mIPOPT_obj_output_file_name=/tmp/ifortYyjtSI.o -mIPOPT_whole_archive_fixup_file_name=/tmp/ifortwarchZQKqPM "-mGLOB_linker_version=2.20.51.0.2-5.34.el6 20100205" -mGLOB_long_size_64 -mGLOB_routine_pointer_size_64 -mGLOB_driver_tempfile_name=/tmp/iforttempfileplCNsO -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_async_unwind_tables=TRUE -mGLOB_obj_output_file=/tmp/ifortYyjtSI.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f -mP2OPT_symtab_type_copy=true conftest.f #include "..." search starts here: #include <...> search starts here: . /opt/intel/impi/4.1.0.024/intel64/include /opt/intel/impi/4.1.0.024/intel64/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/mkl/include /opt/intel/composer_xe_2013.1.117/tbb/include /opt/intel/composer_xe_2013.1.117/compiler/include/intel64 /opt/intel/composer_xe_2013.1.117/compiler/include /usr/local/include /usr/lib/gcc/x86_64-redhat-linux/4.4.6/include /usr/include End of search list. ld /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/crtbegin.o --eh-frame-hdr --build-id -dynamic-linker /lib64/ld-linux-x86-64.so.2 -L/opt/intel/impi/4.1.0.024/intel64/lib -o conftest /opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/for_main.o -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -rpath=/export/home/dkumar/RLIB/lib /tmp/ifortYyjtSI.o --enable-new-dtags -rpath /opt/intel/impi/4.1.0.024/intel64/lib -rpath /opt/intel/mpi-rt/4.1 -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lpthread -lsvml -lc -lgcc -lgcc_s -lirc_s -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/4.4.6/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/crtn.o configure:7634: result: -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s configure:7650: checking for dummy main to link with Fortran libraries configure:7684: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:7684: $? = 0 configure:7729: result: none configure:7762: checking for Fortran name-mangling scheme configure:7775: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:7775: $? = 0 configure:7816: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c cfortran_test.o -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' /tmp/iccrezhfB.o: In function `main': conftest.c:(.text+0x2d): undefined reference to `foobar' configure:7816: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:7816: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c cfortran_test.o -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:7816: $? = 0 configure:7874: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c cfortran_test.o -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:7874: $? = 0 configure:7916: result: lower case, underscore, no extra underscore configure:7957: checking for C-equivalent to Fortran routine "SUB_A" configure:7979: result: sub_a_ configure:8035: checking for a BSD-compatible install configure:8103: result: /usr/bin/install -c configure:8122: checking for gawk configure:8138: found /bin/gawk configure:8149: result: gawk configure:8160: checking whether ln -s works configure:8164: result: yes configure:8171: checking whether make sets $(MAKE) configure:8193: result: yes configure:8203: checking for egrep configure:8265: result: /bin/grep -E configure:8279: checking for m4 configure:8295: found /usr/bin/m4 configure:8306: result: m4 configure:8362: checking m4 flags configure:8373: result: configure:8383: checking for ar configure:8399: found /usr/bin/ar configure:8410: result: ar configure:8466: checking ar flags configure:8471: result: cru configure:8481: checking for nm configure:8497: found /usr/bin/nm configure:8508: result: nm configure:8564: checking nm flags configure:8569: result: configure:8619: checking for ranlib configure:8635: found /usr/bin/ranlib configure:8646: result: ranlib configure:8669: checking for stdbool.h that conforms to C99 configure:8744: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:8744: $? = 0 configure:8751: result: yes configure:8753: checking for _Bool configure:8753: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:8753: $? = 0 configure:8753: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(72): error: expected an expression if (sizeof ((_Bool))) ^ compilation aborted for conftest.c (code 2) configure:8753: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:8753: result: yes configure:8771: checking for an ANSI C-conforming const configure:8845: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:8845: $? = 0 configure:8852: result: yes configure:8860: checking for inline configure:8876: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:8876: $? = 0 configure:8884: result: inline configure:8905: checking for IEEE floating point format configure:8943: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8943: $? = 0 configure:8943: ./conftest configure:8943: $? = 0 configure:8952: result: yes configure:8964: checking for strerror configure:8964: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8964: $? = 0 configure:8964: result: yes configure:8964: checking for access configure:8964: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8964: $? = 0 configure:8964: result: yes configure:8964: checking for unlink configure:8964: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8964: $? = 0 configure:8964: result: yes configure:8976: checking search.h usability configure:8976: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:8976: $? = 0 configure:8976: result: yes configure:8976: checking search.h presence configure:8976: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E conftest.c configure:8976: $? = 0 configure:8976: result: yes configure:8976: checking for search.h configure:8976: result: yes configure:8989: checking for tsearch configure:8989: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8989: $? = 0 configure:8989: result: yes configure:8989: checking for tdelete configure:8989: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:8989: $? = 0 configure:8989: result: yes configure:9007: checking PnetCDF debug mode configure:9019: result: no configure:9022: checking for MPI_Offset configure:9022: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9022: $? = 0 configure:9022: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(49): error: expected an expression if (sizeof ((MPI_Offset))) ^ compilation aborted for conftest.c (code 2) configure:9022: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | /* end confdefs.h. */ | #include | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((MPI_Offset))) | return 0; | ; | return 0; | } configure:9022: result: yes configure:9033: checking size of MPI_Offset configure:9038: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9038: $? = 0 configure:9038: ./conftest configure:9038: $? = 0 configure:9053: result: 8 configure:9070: checking size of MPI_Aint configure:9075: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9075: $? = 0 configure:9075: ./conftest configure:9075: $? = 0 configure:9090: result: 8 configure:9127: checking for MPI_Info_dup configure:9127: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9127: $? = 0 configure:9127: result: yes configure:9127: checking for MPI_Info_free configure:9127: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9127: $? = 0 configure:9127: result: yes configure:9127: checking for MPI_Get_address configure:9127: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9127: $? = 0 configure:9127: result: yes configure:9139: checking for MPI_Type_create_subarray configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9139: checking for MPI_Type_create_hvector configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9139: checking for MPI_Type_create_hindexed configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9139: checking for MPI_Type_create_struct configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9139: checking for MPI_Type_create_resized configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9139: checking for MPI_Type_get_extent configure:9139: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:9139: $? = 0 configure:9139: result: yes configure:9152: checking if MPI constant MPI_COMBINER_DUP is defined configure:9161: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9161: $? = 0 configure:9162: result: yes configure:9176: checking if MPI constant MPI_COMBINER_HVECTOR_INTEGER is defined configure:9185: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9185: $? = 0 configure:9186: result: yes configure:9200: checking if MPI constant MPI_COMBINER_HINDEXED_INTEGER is defined configure:9209: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9209: $? = 0 configure:9210: result: yes configure:9224: checking if MPI constant MPI_COMBINER_SUBARRAY is defined configure:9233: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9233: $? = 0 configure:9234: result: yes configure:9248: checking if MPI constant MPI_COMBINER_DARRAY is defined configure:9257: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9257: $? = 0 configure:9258: result: yes configure:9272: checking if MPI constant MPI_COMBINER_RESIZED is defined configure:9281: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9281: $? = 0 configure:9282: result: yes configure:9296: checking if MPI constant MPI_COMBINER_STRUCT_INTEGER is defined configure:9305: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9305: $? = 0 configure:9306: result: yes configure:9320: checking if MPI constant MPI_COMBINER_INDEXED_BLOCK is defined configure:9329: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9329: $? = 0 configure:9330: result: yes configure:9344: checking if MPI constant MPI_COMBINER_F90_REAL is defined configure:9353: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9353: $? = 0 configure:9354: result: yes configure:9368: checking if MPI constant MPI_COMBINER_F90_INTEGER is defined configure:9377: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9377: $? = 0 configure:9378: result: yes configure:9392: checking if MPI constant MPI_COMBINER_F90_COMPLEX is defined configure:9401: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9401: $? = 0 configure:9402: result: yes configure:9417: checking if MPI constant MPI_ERR_FILE_EXISTS is defined configure:9426: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9426: $? = 0 configure:9427: result: yes configure:9441: checking if MPI constant MPI_ERR_NO_SUCH_FILE is defined configure:9450: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9450: $? = 0 configure:9451: result: yes configure:9465: checking if MPI constant MPI_ERR_AMODE is defined configure:9474: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9474: $? = 0 configure:9475: result: yes configure:9489: checking if MPI constant MPI_ERR_NOT_SAME is defined configure:9498: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9498: $? = 0 configure:9499: result: yes configure:9513: checking if MPI constant MPI_ERR_BAD_FILE is defined configure:9522: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9522: $? = 0 configure:9523: result: yes configure:9537: checking if MPI constant MPI_ERR_READ_ONLY is defined configure:9546: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9546: $? = 0 configure:9547: result: yes configure:9561: checking if MPI constant MPI_ERR_ACCESS is defined configure:9570: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9570: $? = 0 configure:9571: result: yes configure:9585: checking if MPI constant MPI_ERR_NO_SPACE is defined configure:9594: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9594: $? = 0 configure:9595: result: yes configure:9609: checking if MPI constant MPI_ERR_QUOTA is defined configure:9618: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9618: $? = 0 configure:9619: result: yes configure:9636: checking if MPI datatype MPI_CHAR is defined configure:9645: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9645: $? = 0 configure:9646: result: yes configure:9660: checking if MPI datatype MPI_BYTE is defined configure:9669: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9669: $? = 0 configure:9670: result: yes configure:9684: checking if MPI datatype MPI_UNSIGNED_CHAR is defined configure:9693: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9693: $? = 0 configure:9694: result: yes configure:9708: checking if MPI datatype MPI_SHORT is defined configure:9717: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9717: $? = 0 configure:9718: result: yes configure:9732: checking if MPI datatype MPI_UNSIGNED_SHORT is defined configure:9741: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9741: $? = 0 configure:9742: result: yes configure:9756: checking if MPI datatype MPI_INT is defined configure:9765: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9765: $? = 0 configure:9766: result: yes configure:9780: checking if MPI datatype MPI_UNSIGNED is defined configure:9789: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9789: $? = 0 configure:9790: result: yes configure:9804: checking if MPI datatype MPI_LONG is defined configure:9813: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9813: $? = 0 configure:9814: result: yes configure:9828: checking if MPI datatype MPI_FLOAT is defined configure:9837: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9837: $? = 0 configure:9838: result: yes configure:9852: checking if MPI datatype MPI_DOUBLE is defined configure:9861: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9861: $? = 0 configure:9862: result: yes configure:9876: checking if MPI datatype MPI_LONG_LONG_INT is defined configure:9885: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9885: $? = 0 configure:9886: result: yes configure:9900: checking if MPI datatype MPI_UNSIGNED_LONG_LONG is defined configure:9909: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9909: $? = 0 configure:9910: result: yes configure:9924: checking if MPI datatype MPI_UB is defined configure:9933: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9933: $? = 0 configure:9934: result: yes configure:9948: checking if MPI datatype MPI_LB is defined configure:9957: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9957: $? = 0 configure:9958: result: yes configure:9972: checking if MPI datatype MPI_OFFSET is defined configure:9981: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:9981: $? = 0 configure:9982: result: yes configure:9998: checking if MPI datatype MPI_CHARACTER is defined configure:10007: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10007: $? = 0 configure:10008: result: yes configure:10022: checking if MPI datatype MPI_REAL is defined configure:10031: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10031: $? = 0 configure:10032: result: yes configure:10046: checking if MPI datatype MPI_INTEGER is defined configure:10055: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10055: $? = 0 configure:10056: result: yes configure:10070: checking if MPI datatype MPI_DOUBLE_PRECISION is defined configure:10079: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10079: $? = 0 configure:10080: result: yes configure:10094: checking if MPI datatype MPI_INTEGER1 is defined configure:10103: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10103: $? = 0 configure:10104: result: yes configure:10118: checking if MPI datatype MPI_INTEGER2 is defined configure:10127: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10127: $? = 0 configure:10128: result: yes configure:10142: checking if MPI datatype MPI_INTEGER4 is defined configure:10151: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10151: $? = 0 configure:10152: result: yes configure:10166: checking if MPI datatype MPI_INTEGER8 is defined configure:10175: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10175: $? = 0 configure:10176: result: yes configure:10190: checking if MPI datatype MPI_INTEGER16 is defined configure:10199: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10199: $? = 0 configure:10200: result: yes configure:10214: checking if MPI datatype MPI_REAL4 is defined configure:10223: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10223: $? = 0 configure:10224: result: yes configure:10238: checking if MPI datatype MPI_REAL8 is defined configure:10247: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10247: $? = 0 configure:10248: result: yes configure:10262: checking if MPI datatype MPI_REAL16 is defined configure:10271: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10271: $? = 0 configure:10272: result: yes configure:10286: checking if MPI datatype MPI_COMPLEX8 is defined configure:10295: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10295: $? = 0 configure:10296: result: yes configure:10310: checking if MPI datatype MPI_COMPLEX16 is defined configure:10319: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10319: $? = 0 configure:10320: result: yes configure:10334: checking if MPI datatype MPI_COMPLEX32 is defined configure:10343: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10343: $? = 0 configure:10344: result: yes configure:10372: checking whether char is unsigned configure:10399: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10399: $? = 0 configure:10406: result: no configure:10413: checking whether byte ordering is bigendian configure:10428: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(100): error: identifier "not" is undefined not a universal capable compiler ^ conftest.c(100): error: expected a ";" not a universal capable compiler ^ compilation aborted for conftest.c (code 2) configure:10428: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:10481: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10481: $? = 0 configure:10507: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(114): error: identifier "not" is undefined not big endian ^ conftest.c(114): error: expected a ";" not big endian ^ conftest.c(117): warning #12: parsing restarts here after previous syntax error ; ^ compilation aborted for conftest.c (code 2) configure:10507: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | /* end confdefs.h. */ | #include | #include | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:10667: result: no configure:10698: checking return type of signal handlers configure:10724: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(113): error: operand of "*" must be a pointer return *(signal (0, 0)) (0) == 1; ^ compilation aborted for conftest.c (code 2) configure:10724: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | /* end confdefs.h. */ | #include | #include | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return *(signal (0, 0)) (0) == 1; | ; | return 0; | } configure:10731: result: void configure:10739: checking for size_t configure:10739: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10739: $? = 0 configure:10739: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(144): error: expected an expression if (sizeof ((size_t))) ^ compilation aborted for conftest.c (code 2) configure:10739: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:10739: result: yes configure:10750: checking for off_t configure:10750: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10750: $? = 0 configure:10750: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(144): error: expected an expression if (sizeof ((off_t))) ^ compilation aborted for conftest.c (code 2) configure:10750: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:10750: result: yes configure:10761: checking for ssize_t configure:10761: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10761: $? = 0 configure:10761: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(144): error: expected an expression if (sizeof ((ssize_t))) ^ compilation aborted for conftest.c (code 2) configure:10761: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:10761: result: yes configure:10770: checking for ptrdiff_t configure:10770: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10770: $? = 0 configure:10770: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(145): error: expected an expression if (sizeof ((ptrdiff_t))) ^ compilation aborted for conftest.c (code 2) configure:10770: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:10770: result: yes configure:10779: checking for uchar configure:10779: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(146): error: identifier "uchar" is undefined if (sizeof (uchar)) ^ compilation aborted for conftest.c (code 2) configure:10779: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (uchar)) | return 0; | ; | return 0; | } configure:10779: result: no configure:10788: checking for ushort configure:10788: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10788: $? = 0 configure:10788: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(146): error: expected an expression if (sizeof ((ushort))) ^ compilation aborted for conftest.c (code 2) configure:10788: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ushort))) | return 0; | ; | return 0; | } configure:10788: result: yes configure:10797: checking for uint configure:10797: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 configure:10797: $? = 0 configure:10797: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(147): error: expected an expression if (sizeof ((uint))) ^ compilation aborted for conftest.c (code 2) configure:10797: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((uint))) | return 0; | ; | return 0; | } configure:10797: result: yes configure:10806: checking for longlong configure:10806: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(148): error: identifier "longlong" is undefined if (sizeof (longlong)) ^ compilation aborted for conftest.c (code 2) configure:10806: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (longlong)) | return 0; | ; | return 0; | } configure:10806: result: no configure:10815: checking for ulonglong configure:10815: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c >&5 conftest.c(148): error: identifier "ulonglong" is undefined if (sizeof (ulonglong)) ^ compilation aborted for conftest.c (code 2) configure:10815: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "parallel-netcdf" | #define PACKAGE_TARNAME "parallel-netcdf" | #define PACKAGE_VERSION "1.6.1" | #define PACKAGE_STRING "parallel-netcdf 1.6.1" | #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" | #define PACKAGE_URL "" | #define PNETCDF_VERSION_MAJOR 1 | #define PNETCDF_VERSION_MINOR 6 | #define PNETCDF_VERSION_SUB 1 | #define PNETCDF_VERSION_PRE | #define PNETCDF_VERSION "1.6.1" | #define PNETCDF_RELEASE_DATE "01 Jun 2015" | #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define F77_NAME_LOWER_USCORE /**/ | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ACCESS 1 | #define HAVE_UNLINK 1 | #define HAVE_SEARCH_H 1 | #define HAVE_TSEARCH 1 | #define HAVE_TDELETE 1 | #define SIZEOF_MPI_OFFSET 8 | #define SIZEOF_MPI_AINT 8 | #define ENABLE_CDF5 /**/ | #define ENABLE_NONBLOCKING /**/ | #define HAVE_MPI_INFO_DUP 1 | #define HAVE_MPI_INFO_FREE 1 | #define HAVE_MPI_GET_ADDRESS 1 | #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 | #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 | #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 | #define HAVE_MPI_TYPE_CREATE_STRUCT 1 | #define HAVE_MPI_TYPE_CREATE_RESIZED 1 | #define HAVE_MPI_TYPE_GET_EXTENT 1 | #define HAVE_MPI_COMBINER_DUP 1 | #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 | #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 | #define HAVE_MPI_COMBINER_SUBARRAY 1 | #define HAVE_MPI_COMBINER_DARRAY 1 | #define HAVE_MPI_COMBINER_RESIZED 1 | #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 | #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 | #define HAVE_MPI_COMBINER_F90_REAL 1 | #define HAVE_MPI_COMBINER_F90_INTEGER 1 | #define HAVE_MPI_COMBINER_F90_COMPLEX 1 | #define HAVE_MPI_ERR_FILE_EXISTS 1 | #define HAVE_MPI_ERR_NO_SUCH_FILE 1 | #define HAVE_MPI_ERR_AMODE 1 | #define HAVE_MPI_ERR_NOT_SAME 1 | #define HAVE_MPI_ERR_BAD_FILE 1 | #define HAVE_MPI_ERR_READ_ONLY 1 | #define HAVE_MPI_ERR_ACCESS 1 | #define HAVE_MPI_ERR_NO_SPACE 1 | #define HAVE_MPI_ERR_QUOTA 1 | #define HAVE_MPI_CHAR 1 | #define HAVE_MPI_BYTE 1 | #define HAVE_MPI_UNSIGNED_CHAR 1 | #define HAVE_MPI_SHORT 1 | #define HAVE_MPI_UNSIGNED_SHORT 1 | #define HAVE_MPI_INT 1 | #define HAVE_MPI_UNSIGNED 1 | #define HAVE_MPI_LONG 1 | #define HAVE_MPI_FLOAT 1 | #define HAVE_MPI_DOUBLE 1 | #define HAVE_MPI_LONG_LONG_INT 1 | #define HAVE_MPI_UNSIGNED_LONG_LONG 1 | #define HAVE_MPI_UB 1 | #define HAVE_MPI_LB 1 | #define HAVE_MPI_OFFSET_DATATYPE 1 | #define HAVE_MPI_CHARACTER 1 | #define HAVE_MPI_REAL 1 | #define HAVE_MPI_INTEGER 1 | #define HAVE_MPI_DOUBLE_PRECISION 1 | #define HAVE_MPI_INTEGER1 1 | #define HAVE_MPI_INTEGER2 1 | #define HAVE_MPI_INTEGER4 1 | #define HAVE_MPI_INTEGER8 1 | #define HAVE_MPI_INTEGER16 1 | #define HAVE_MPI_REAL4 1 | #define HAVE_MPI_REAL8 1 | #define HAVE_MPI_REAL16 1 | #define HAVE_MPI_COMPLEX8 1 | #define HAVE_MPI_COMPLEX16 1 | #define HAVE_MPI_COMPLEX32 1 | #define RETSIGTYPE void | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_USHORT 1 | #define HAVE_UINT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (ulonglong)) | return 0; | ; | return 0; | } configure:10815: result: no configure:10830: checking size of size_t configure:10835: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:10835: $? = 0 configure:10835: ./conftest configure:10835: $? = 0 configure:10849: result: 8 configure:10863: checking size of off_t configure:10868: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:10868: $? = 0 configure:10868: ./conftest configure:10868: $? = 0 configure:10882: result: 8 configure:10896: checking size of signed char configure:10901: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:10901: $? = 0 configure:10901: ./conftest configure:10901: $? = 0 configure:10915: result: 1 configure:10929: checking size of unsigned char configure:10934: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:10934: $? = 0 configure:10934: ./conftest configure:10934: $? = 0 configure:10948: result: 1 configure:10962: checking size of short configure:10967: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:10967: $? = 0 configure:10967: ./conftest configure:10967: $? = 0 configure:10981: result: 2 configure:10995: checking size of unsigned short configure:11000: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11000: $? = 0 configure:11000: ./conftest configure:11000: $? = 0 configure:11014: result: 2 configure:11028: checking size of int configure:11033: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11033: $? = 0 configure:11033: ./conftest configure:11033: $? = 0 configure:11047: result: 4 configure:11061: checking size of unsigned int configure:11066: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11066: $? = 0 configure:11066: ./conftest configure:11066: $? = 0 configure:11080: result: 4 configure:11094: checking size of long configure:11099: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11099: $? = 0 configure:11099: ./conftest configure:11099: $? = 0 configure:11113: result: 8 configure:11127: checking size of float configure:11132: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11132: $? = 0 configure:11132: ./conftest configure:11132: $? = 0 configure:11146: result: 4 configure:11160: checking size of double configure:11165: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11165: $? = 0 configure:11165: ./conftest configure:11165: $? = 0 configure:11179: result: 8 configure:11193: checking size of long long configure:11198: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11198: $? = 0 configure:11198: ./conftest configure:11198: $? = 0 configure:11212: result: 8 configure:11226: checking size of unsigned long long configure:11231: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11231: $? = 0 configure:11231: ./conftest configure:11231: $? = 0 configure:11245: result: 8 configure:11261: checking size of ushort configure:11266: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11266: $? = 0 configure:11266: ./conftest configure:11266: $? = 0 configure:11280: result: 2 configure:11296: checking size of uint configure:11301: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -o conftest -O3 -xHost -axSSE4.2 -fPIC -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-WL,-rpath=/opt/intel/lib/intel64' configure:11301: $? = 0 configure:11301: ./conftest configure:11301: $? = 0 configure:11315: result: 4 configure:11524: checking for C-equivalent to Fortran routine "SUB" configure:11545: result: sub_ configure:11563: checking for Fortran "integer*1" configure:11572: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:11572: $? = 0 configure:11573: result: yes configure:11602: checking for Fortran "integer*2" configure:11611: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:11611: $? = 0 configure:11612: result: yes configure:11641: checking for Fortran "integer*8" configure:11650: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:11650: $? = 0 configure:11651: result: yes configure:11686: checking if Fortran "integer*1" is configure:11696: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11699: $? = 0 configure:11702: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:11705: $? = 0 configure:11708: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:11711: $? = 0 configure:11714: ./conftest configure:11717: $? = 0 configure:11719: result: "signed char" in C configure:11762: checking if Fortran "integer*2" is configure:11772: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11775: $? = 0 configure:11778: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:11781: $? = 0 configure:11784: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:11787: $? = 0 configure:11790: ./conftest configure:11793: $? = 0 configure:11795: result: "short" in C configure:11838: checking if Fortran "integer*8" is configure:11848: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11851: $? = 0 configure:11854: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:11857: $? = 0 configure:11860: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:11863: $? = 0 configure:11866: ./conftest configure:11869: $? = 1 configure:11848: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11851: $? = 0 configure:11854: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:11857: $? = 0 configure:11860: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:11863: $? = 0 configure:11866: ./conftest configure:11869: $? = 0 configure:11871: result: "long" in C configure:11912: checking if Fortran "integer" is configure:11922: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11925: $? = 0 configure:11928: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:11931: $? = 0 configure:11934: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:11937: $? = 0 configure:11940: ./conftest configure:11943: $? = 0 configure:11945: result: "int" in C configure:11984: checking if Fortran "real" is configure:11994: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:11997: $? = 0 configure:12000: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:12003: $? = 0 configure:12006: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:12009: $? = 0 configure:12012: ./conftest configure:12015: $? = 0 configure:12017: result: "float" in C configure:12056: checking if Fortran "doubleprecision" is configure:12066: /opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -c -O3 -xHost -axSSE4.2 -fPIC conftest.c configure:12069: $? = 0 configure:12072: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -O3 -xHost -axSSE4.2 -fPIC -c conftestf.f configure:12075: $? = 0 configure:12078: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -o conftest -O3 -xHost -axSSE4.2 -fPIC conftestf.o conftest.o -Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic ifort: command line warning #10157: ignoring option '-W'; argument is of wrong type configure:12081: $? = 0 configure:12084: ./conftest configure:12087: $? = 0 configure:12089: result: "double" in C configure:12120: checking for Fortran-equivalent to netCDF "byte" configure:12135: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12135: $? = 0 configure:12151: result: byte configure:12157: checking for Fortran-equivalent to netCDF "short" configure:12172: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12172: $? = 0 configure:12188: result: integer*2 configure:12201: checking for Fortran NFMPI_OFFSET "integer*8" configure:12215: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12215: $? = 0 configure:12229: result: yes configure:12248: checking Fortran 90 module extension configure:12270: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12270: $? = 0 configure:12287: result: mod configure:12305: checking Fortran 90 module inclusion flag configure:12327: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12327: $? = 0 configure:12341: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -Mconftest.dir -Mconftest.dir conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-Mconftest.dir' ifort: command line warning #10006: ignoring unknown option '-Mconftest.dir' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12341: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12341: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -Iconftest.dir -Iconftest.dir conftest.f >&5 configure:12341: $? = 0 configure:12362: result: -I configure:12384: checking Fortran 90 module output flag configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -Jsub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-Jsub' configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -Jsub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-Jsub' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12421: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -J sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-J' ifort: warning #10145: no action performed for file 'sub' configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -J sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-J' ifort: error #10236: File not found: 'sub' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12421: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -fmod=sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-fmod=sub' configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -fmod=sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-fmod=sub' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12421: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -moddir=sub conftest.f >&5 ifort: command line warning #10159: invalid argument for option '-m' configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -moddir=sub conftest.f >&5 ifort: command line warning #10159: invalid argument for option '-m' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12421: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC +moddir=sub conftest.f >&5 ifort: error #10236: File not found: '+moddir=sub' configure:12412: $? = 1 configure: failed program was: | | module conftest_module | contains | subroutine conftest_routine | write(*,'(a)') 'gotcha!' | end subroutine | end module configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -qmoddir=sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-qmoddir=sub' configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -qmoddir=sub conftest.f >&5 ifort: command line warning #10006: ignoring unknown option '-qmoddir=sub' conftest.f(3): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [CONFTEST_MODULE] use conftest_module ----------^ compilation aborted for conftest.f (code 1) configure:12421: $? = 1 configure: failed program was: | | program main | use conftest_module | call conftest_routine | end program configure:12412: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -mod sub conftest.f >&5 configure:12412: $? = 0 configure:12421: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC -mod sub conftest.f >&5 configure:12421: $? = 0 configure:12443: result: -mod configure:12473: checking if Fortran 90 compiler capitalizes .mod filenames configure:12482: /opt/intel/impi/4.1.0.024/intel64/bin/mpiifort -c -O3 -xHost -axSSE4.2 -fPIC conftest.f >&5 configure:12482: $? = 0 configure:12492: result: no configure:12607: checking for manual-page index command configure:12609: result: configure:12689: checking for latex configure:12707: found /usr/bin/latex configure:12719: result: /usr/bin/latex configure:12729: checking for dvipdf configure:12747: found /usr/bin/dvipdf configure:12759: result: /usr/bin/dvipdf configure:12851: WARNING: cache variable ac_cv_env_FCFLAGS_value contains a newline configure:12945: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by parallel-netcdf config.status 1.6.1, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on weather.jnu.ac.in config.status:1058: creating macros.make config.status:1058: creating Makefile config.status:1058: creating src/Makefile config.status:1058: creating src/lib/Makefile config.status:1058: creating src/lib/pnetcdf.h config.status:1058: creating src/utils/Makefile config.status:1058: creating src/utils/ncmpidump/Makefile config.status:1058: creating src/utils/ncmpidiff/Makefile config.status:1058: creating src/utils/ncmpigen/Makefile config.status:1058: creating src/utils/ncmpivalid/Makefile config.status:1058: creating src/utils/pnetcdf_version/Makefile config.status:1058: creating test/Makefile config.status:1058: creating test/common/Makefile config.status:1058: creating test/nc_test/Makefile config.status:1058: creating test/C/Makefile config.status:1058: creating test/test_int/Makefile config.status:1058: creating test/test_float/Makefile config.status:1058: creating test/test_double/Makefile config.status:1058: creating test/test_double_int/Makefile config.status:1058: creating test/test_dtype/Makefile config.status:1058: creating test/fandc/Makefile config.status:1058: creating test/testcases/Makefile config.status:1058: creating test/nonblocking/Makefile config.status:1058: creating test/header/Makefile config.status:1058: creating test/cdf_format/Makefile config.status:1058: creating test/largefile/Makefile config.status:1058: creating test/data/Makefile config.status:1058: creating examples/C/Makefile config.status:1058: creating examples/tutorial/Makefile config.status:1058: creating examples/Makefile config.status:1058: creating doc/Makefile config.status:1058: creating man/Makefile config.status:1058: creating scripts/Makefile config.status:1058: creating benchmarks/Makefile config.status:1058: creating benchmarks/C/Makefile config.status:1058: creating test/nf_test/Makefile config.status:1058: creating test/nf90_test/Makefile config.status:1058: creating test/F90/Makefile config.status:1058: creating examples/F77/Makefile config.status:1058: creating examples/F90/Makefile config.status:1058: creating src/libf90/Makefile config.status:1058: creating src/libf90/api.f90 config.status:1058: creating src/libf90/nfmpi_constants.f90 config.status:1058: creating src/libf/Makefile config.status:1058: creating src/libf/pnetcdf.inc config.status:1058: creating src/libcxx/Makefile config.status:1058: creating examples/CXX/Makefile config.status:1058: creating test/CXX/Makefile config.status:1058: creating benchmarks/FLASH-IO/Makefile config.status:1058: creating test/subfile/Makefile config.status:1058: creating src/lib/ncconfig.h config.status:1058: creating src/libf/nfconfig_inc config.status:1233: src/libf/nfconfig_inc is unchanged ## ---------------- ## ## Cache variables. ## ## ---------------- ## configure:17: WARNING: cache variable ac_cv_env_FCFLAGS_value contains a newline ac_cv_NFMPI_OFFSET=yes ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_bigendian=no ac_cv_c_char_unsigned=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_ieeefloat=yes ac_cv_c_inline=inline ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=mpiicc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-O3 -xHost -axSSE4.2 -fPIC' ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-O3 -xHost -axSSE4.2 -fPIC' ac_cv_env_CXX_set=set ac_cv_env_CXX_value=mpiicpc ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FCFLAGS_set=set ac_cv_env_FC_set=set ac_cv_env_FC_value=mpiifort ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-O3 -xHost -axSSE4.2 -fPIC' ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPICC_set=set ac_cv_env_MPICC_value=mpiicc ac_cv_env_MPICXX_set=set ac_cv_env_MPICXX_value=mpiicpc ac_cv_env_MPIF77_set=set ac_cv_env_MPIF77_value=mpiifort ac_cv_env_MPIF90_set=set ac_cv_env_MPIF90_value=mpiifort ac_cv_env_RM_set= ac_cv_env_RM_value= ac_cv_env_TEST_MPIRUN_set= ac_cv_env_TEST_MPIRUN_value= ac_cv_env_TEST_OUTDIR_set= ac_cv_env_TEST_OUTDIR_value= ac_cv_env_TEST_SEQRUN_set= ac_cv_env_TEST_SEQRUN_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=no ac_cv_fc_compiler_gnu=no ac_cv_fc_dummy_main=none ac_cv_fc_fixedform=-fixed ac_cv_fc_freeform=-FR ac_cv_fc_libs=' -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_module_ext=mod ac_cv_fc_module_flag=-I ac_cv_fc_module_output_flag='-mod ' ac_cv_fc_pp_define=-D ac_cv_fc_pp_srcext_F90=none ac_cv_fc_pp_srcext_F=none ac_cv_fc_srcext_f90=none ac_cv_fc_srcext_f=none ac_cv_fortran_dummy_main=none ac_cv_func_MPI_Comm_rank=yes ac_cv_func_MPI_File_close=yes ac_cv_func_MPI_File_open=yes ac_cv_func_MPI_Get_address=yes ac_cv_func_MPI_Info_dup=yes ac_cv_func_MPI_Info_free=yes ac_cv_func_MPI_Type_create_hindexed=yes ac_cv_func_MPI_Type_create_hvector=yes ac_cv_func_MPI_Type_create_resized=yes ac_cv_func_MPI_Type_create_struct=yes ac_cv_func_MPI_Type_create_subarray=yes ac_cv_func_MPI_Type_get_extent=yes ac_cv_func_access=yes ac_cv_func_strerror=yes ac_cv_func_tdelete=yes ac_cv_func_tsearch=yes ac_cv_func_unlink=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_search_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_m4_stdout= ac_cv_objext=o ac_cv_path_DVIPDF=/usr/bin/dvipdf ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_path_LATEX=/usr/bin/latex ac_cv_path_MPICC=/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc ac_cv_path_MPICXX=/opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc ac_cv_path_MPIF77=/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort ac_cv_path_MPIF90=/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E' ac_cv_prog_M4=m4 ac_cv_prog_NM=nm ac_cv_prog_ac_ct_CC=/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f90_uppercase_mod=no ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_MPI_Aint=8 ac_cv_sizeof_MPI_Offset=8 ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_long=8 ac_cv_sizeof_off_t=8 ac_cv_sizeof_short=2 ac_cv_sizeof_signed_char=1 ac_cv_sizeof_size_t=8 ac_cv_sizeof_uint=4 ac_cv_sizeof_unsigned_char=1 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long_long=8 ac_cv_sizeof_unsigned_short=2 ac_cv_sizeof_ushort=2 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_type_MPI_Offset=yes ac_cv_type__Bool=yes ac_cv_type_longlong=no ac_cv_type_off_t=yes ac_cv_type_ptrdiff_t=yes ac_cv_type_signal=void ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uchar=no ac_cv_type_uint=yes ac_cv_type_ulonglong=no ac_cv_type_ushort=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ' ' AR='ar' ARFLAGS='cru' AWK='gawk' BUILDDIR='/home/dkumar/RLIB/parallel-netcdf-1.6.1' CC='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc' CC_MAKEDEPEND='false' CFLAGS='-O3 -xHost -axSSE4.2 -fPIC' CONFIGURE_ARGS_CLEAN='MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB' CPP='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc -E' CPPFLAGS='' CXX='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc' CXXCPPFLAGS='' CXXFLAGS='-O3 -xHost -axSSE4.2 -fPIC' DEFS='-DHAVE_CONFIG_H' DVIPDF='/usr/bin/dvipdf' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' F77='/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort' F90FLAGS='-O3 -xHost -axSSE4.2 -fPIC F90LDFLAGS='' F90LIBS='' FC='/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort' FCFLAGS='-O3 -xHost -axSSE4.2 -fPIC FCFLAGS_F90='' FCFLAGS_F='' FCFLAGS_f90='' FCFLAGS_f='' FCLIBS=' -L/opt/intel/impi/4.1.0.024/intel64/lib -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64 -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/opt/intel/composer_xe_2013.1.117/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013.1.117/tbb/lib/intel64/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -ldl -lmpi -lmpigf -lmpigi -lrt -lpthread -lifport -lifcore -limf -lsvml -lm -lipgo -lintlc -lirc_s' FC_DEFINE='-D' FC_MODEXT='mod' FC_MODINC='-I' FC_MODOUT='-mod ${ac_empty}' FFIXEDFORMFLAG='-fixed' FFLAGS='-O3 -xHost -axSSE4.2 -fPIC' FFREEFORMFLAG='-FR' FLDFLAGS='' FLIBS='' FPP='' FPPFLAGS='' GREP='/bin/grep' INOUT='INOUT' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' LATEX='/usr/bin/latex' LCOV_LIB='' LDFLAGS='-Wl,-rpath=/export/home/dkumar/RLIB/lib -WL,-rpath=/opt/intel/lib/intel64 -i-dynamic' LIBOBJS='' LIBS='' LN_S='ln -s' LTLIBOBJS='' M4='m4' M4FLAGS='' MAKEWHATIS_CMD='' MPICC='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc' MPICXX='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicpc' MPIF77='/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort' MPIF90='/opt/intel/impi/4.1.0.024/intel64/bin/mpiifort' NM='nm' NMFLAGS='' OBJEXT='o' PACKAGE_BUGREPORT='parallel-netcdf@mcs.anl.gov' PACKAGE_NAME='parallel-netcdf' PACKAGE_STRING='parallel-netcdf 1.6.1' PACKAGE_TARNAME='parallel-netcdf' PACKAGE_URL='' PACKAGE_VERSION='1.6.1' PATH_SEPARATOR=':' PNETCDF_INC='/home/dkumar/RLIB/parallel-netcdf-1.6.1/src/libf90' PNETCDF_LIB='-L/home/dkumar/RLIB/parallel-netcdf-1.6.1/src/lib' PNETCDF_RELEASE_DATE2='2015-06-01' PNETCDF_RELEASE_DATE='01 Jun 2015' PNETCDF_VERSION='1.6.1' PNETCDF_VERSION_MAJOR='1' PNETCDF_VERSION_MINOR='6' PNETCDF_VERSION_PRE='' PNETCDF_VERSION_SUB='1' RANLIB='ranlib' RM='rm' SET_MAKE='' SHELL='/bin/sh' SIZEOF_MPI_OFFSET='8' TEST_MPIRUN='mpiexec -n NP' TEST_OUTDIR='.' TEST_SEQRUN='' UPPER_CASE_MOD='no' WHATIS='whatis' ac_ct_CC='/opt/intel/impi/4.1.0.024/intel64/bin/mpiicc' ac_ct_CXX='' ac_ct_F77='' ac_ct_FC='' ac_empty='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enable_subfiling='yes' exec_prefix='${prefix}' has_fortran='yes' has_latex='yes' has_mpicxx='yes' have_yacc_lex='no' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' is_bigendian='no' large_file_test='no' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/export/home/dkumar/RLIB' prog='' program_transform_name='s,x,x,' psdir='${docdir}' rm_cmd='' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "parallel-netcdf" #define PACKAGE_TARNAME "parallel-netcdf" #define PACKAGE_VERSION "1.6.1" #define PACKAGE_STRING "parallel-netcdf 1.6.1" #define PACKAGE_BUGREPORT "parallel-netcdf@mcs.anl.gov" #define PACKAGE_URL "" #define PNETCDF_VERSION_MAJOR 1 #define PNETCDF_VERSION_MINOR 6 #define PNETCDF_VERSION_SUB 1 #define PNETCDF_VERSION_PRE #define PNETCDF_VERSION "1.6.1" #define PNETCDF_RELEASE_DATE "01 Jun 2015" #define CONFIGURE_ARGS_CLEAN "MPICC=mpiicc MPICXX=mpiicpc MPIF77=mpiifort MPIF90=mpiifort --prefix=/export/home/dkumar/RLIB" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_MALLOC_H 1 #define F77_NAME_LOWER_USCORE /**/ #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define HAVE_STRERROR 1 #define HAVE_ACCESS 1 #define HAVE_UNLINK 1 #define HAVE_SEARCH_H 1 #define HAVE_TSEARCH 1 #define HAVE_TDELETE 1 #define SIZEOF_MPI_OFFSET 8 #define SIZEOF_MPI_AINT 8 #define ENABLE_CDF5 /**/ #define ENABLE_NONBLOCKING /**/ #define HAVE_MPI_INFO_DUP 1 #define HAVE_MPI_INFO_FREE 1 #define HAVE_MPI_GET_ADDRESS 1 #define HAVE_MPI_TYPE_CREATE_SUBARRAY 1 #define HAVE_MPI_TYPE_CREATE_HVECTOR 1 #define HAVE_MPI_TYPE_CREATE_HINDEXED 1 #define HAVE_MPI_TYPE_CREATE_STRUCT 1 #define HAVE_MPI_TYPE_CREATE_RESIZED 1 #define HAVE_MPI_TYPE_GET_EXTENT 1 #define HAVE_MPI_COMBINER_DUP 1 #define HAVE_MPI_COMBINER_HVECTOR_INTEGER 1 #define HAVE_MPI_COMBINER_HINDEXED_INTEGER 1 #define HAVE_MPI_COMBINER_SUBARRAY 1 #define HAVE_MPI_COMBINER_DARRAY 1 #define HAVE_MPI_COMBINER_RESIZED 1 #define HAVE_MPI_COMBINER_STRUCT_INTEGER 1 #define HAVE_MPI_COMBINER_INDEXED_BLOCK 1 #define HAVE_MPI_COMBINER_F90_REAL 1 #define HAVE_MPI_COMBINER_F90_INTEGER 1 #define HAVE_MPI_COMBINER_F90_COMPLEX 1 #define HAVE_MPI_ERR_FILE_EXISTS 1 #define HAVE_MPI_ERR_NO_SUCH_FILE 1 #define HAVE_MPI_ERR_AMODE 1 #define HAVE_MPI_ERR_NOT_SAME 1 #define HAVE_MPI_ERR_BAD_FILE 1 #define HAVE_MPI_ERR_READ_ONLY 1 #define HAVE_MPI_ERR_ACCESS 1 #define HAVE_MPI_ERR_NO_SPACE 1 #define HAVE_MPI_ERR_QUOTA 1 #define HAVE_MPI_CHAR 1 #define HAVE_MPI_BYTE 1 #define HAVE_MPI_UNSIGNED_CHAR 1 #define HAVE_MPI_SHORT 1 #define HAVE_MPI_UNSIGNED_SHORT 1 #define HAVE_MPI_INT 1 #define HAVE_MPI_UNSIGNED 1 #define HAVE_MPI_LONG 1 #define HAVE_MPI_FLOAT 1 #define HAVE_MPI_DOUBLE 1 #define HAVE_MPI_LONG_LONG_INT 1 #define HAVE_MPI_UNSIGNED_LONG_LONG 1 #define HAVE_MPI_UB 1 #define HAVE_MPI_LB 1 #define HAVE_MPI_OFFSET_DATATYPE 1 #define HAVE_MPI_CHARACTER 1 #define HAVE_MPI_REAL 1 #define HAVE_MPI_INTEGER 1 #define HAVE_MPI_DOUBLE_PRECISION 1 #define HAVE_MPI_INTEGER1 1 #define HAVE_MPI_INTEGER2 1 #define HAVE_MPI_INTEGER4 1 #define HAVE_MPI_INTEGER8 1 #define HAVE_MPI_INTEGER16 1 #define HAVE_MPI_REAL4 1 #define HAVE_MPI_REAL8 1 #define HAVE_MPI_REAL16 1 #define HAVE_MPI_COMPLEX8 1 #define HAVE_MPI_COMPLEX16 1 #define HAVE_MPI_COMPLEX32 1 #define RETSIGTYPE void #define HAVE_SSIZE_T 1 #define HAVE_PTRDIFF_T 1 #define HAVE_USHORT 1 #define HAVE_UINT 1 #define SIZEOF_SIZE_T 8 #define SIZEOF_OFF_T 8 #define SIZEOF_SIGNED_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_USHORT 2 #define SIZEOF_UINT 4 #define NF_INT1_T integer*1 #define NF_INT2_T integer*2 #define NF_INT8_T integer*8 #define NF_INT1_IS_C_SIGNED_CHAR 1 #define NF_INT2_IS_C_SHORT 1 #define NF_INT8_IS_C_LONG 1 #define NF_INT_IS_C_INT 1 #define NF_REAL_IS_C_FLOAT 1 #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 #define NCBYTE_T byte #define NCSHORT_T integer*2 #define ENABLE_SUBFILING 1 configure: exit 0