<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2//EN">
<HTML>
<HEAD>
<META HTTP-EQUIV="Content-Type" CONTENT="text/html; charset=iso-8859-1">
<META NAME="Generator" CONTENT="MS Exchange Server version 6.5.7638.1">
<TITLE>Error in configuring pnetcdf on Bluegene/L</TITLE>
</HEAD>
<BODY>
<!-- Converted from text/plain format -->
<P><FONT SIZE=2>Dear Sir,<BR>
I'm trying to configure the parallel netcdf library to link with WRF model on BlueGene/L. I set some environmental variables as suggested by the pnetcdf which are:<BR>
<BR>
setenv CC blrts_xlc<BR>
setenv MPICC blrts_xlc<BR>
setenv CXX blrts_xlC<BR>
setenv MPICXX blrts_xlC<BR>
setenv FC blrts_xlf<BR>
setenv F77 blrts_xlf<BR>
setenv MPIF77 blrts_xlf<BR>
setenv CFLAGS "-I/bl/BlueLight/ppcfloor/bglsys/include/"<BR>
setenv LIBS "-L/bgl/BlueLight/ppcfloor/bglsys/lib -lmpich.rts -lmsglayer.rts -ldevices.rts -lrts.rts -ldevices.rts -lrts.rts"<BR>
<BR>
I ensured that theses variables were set correctly and the configure script reads these variables successfully. I ran the configuration script with the following arguments:<BR>
./configure --build powerpc32-unknown-gnu --host powerpc-suse-linux --with-mpi=/bgl/BlueLight/ppcfloor/bglsys/<BR>
<BR>
Now, I have a configuration error concerning with MPI_offset size:<BR>
<BR>
checking sizeof MPI_Offset... "conftest.c", line 1.10: 1506-296 (S) #include file "mpi.h" not found.<BR>
<BR>
I ensured that the "mpi.h" is located in "/bl/BlueLight/ppcfloor/bglsys/include/"<BR>
I don't know where is the problem. I attached with this mail the configuration log file<BR>
I will be very happy if you could help me.<BR>
Thank you very much<BR>
<BR>
</FONT>
</P>
</BODY>
</HTML>