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I have increased the number of MPI ranks and it worked just fine.<br>
Thank you,<br>
<br>
Best regards,<br>
<br>
Arnold<br>
<br>
<br>
<div class="moz-cite-prefix">Le 30/03/2018 à 09:48,
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov">nek5000-users@lists.mcs.anl.gov</a> a écrit :<br>
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<p>Hi so lhis is equal to 359641 and I'm using 7 ranks.. However I
can try and increase that value (which I will try immediately).<br>
<br>
Best,</p>
<p>Arnold<br>
</p>
<br>
<div class="moz-cite-prefix">Le 29/03/2018 à 17:57, <a
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écrit :<br>
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cite="mid:mailman.12124.1522339079.19102.nek5000-users@lists.mcs.anl.gov">
<pre wrap="">What's your lhis? How many MPI ranks are you using?
-----Original message-----
</pre>
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<pre wrap=""><a class="moz-txt-link-abbreviated" href="mailto:From:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">From:nek5000-users@lists.mcs.anl.gov</a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><nek5000-users@lists.mcs.anl.gov></a>
Sent: Thursday 29th March 2018 17:54
To: <a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">nek5000-users@lists.mcs.anl.gov</a>
Subject: Re: [Nek5000-users] Maximum number of history points using hpts()
I'm executing 9 times nek5000 to call hpts (using different
case.his files containing each 39960 points, using a shell script)
because I need When I'm using 359640=9*39660 points
This works perfectly fine. However when I'm trying to use a
single file in order to execute nek5000 once, it gives the
following error following error when the number of points is equal
to 359640 :
dump history points
reading history points
found 359640 points
APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault
(signal 11)
I guess I'm encountering some memory problems..
Best regards,
Arnold
Le 29/03/2018 à 17:27,
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">nek5000-users@lists.mcs.anl.gov</a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> a écrit :
What do you mean with doesn't work anymore. How does it manifest itself?
-----Original message-----
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Sent: Thursday 29th March 2018 17:23
To: <a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">nek5000-users@lists.mcs.anl.gov</a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a>
Subject: Re: [Nek5000-users] Maximum number of history points using hpts()
Hello Pierre,
In my case my case.his file contains 39960 points and lhis=39961,
however when I increased the first value and the lhis variable
accordingly it doesn't work anymore. Is there something I'm
missing?
Best,
Arnold
Le 29/03/2018 à 16:30,
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">nek5000-users@lists.mcs.anl.gov</a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> a écrit :
Hi
Arnold,
You can set it in the SIZE file:
param(lhis=100) ! # of pts a proc reads from hpts.in
! Note: lhis*np > npoints in
hpts.in
best,
Pierre
On 2018-03-29 16:14, <a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true">nek5000-users@lists.mcs.anl.gov</a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> <a class="moz-txt-link-rfc2396E" href="mailto:nek5000-users@lists.mcs.anl.gov" moz-do-not-send="true"><mailto:nek5000-users@lists.mcs.anl.gov></a> wrote:
Hi Neks,
I was wondering if there is any maximum number of history points
one should put in the case.his file. If someone could help me
regarding that topic, I haven't found any information yet.
Thank you for your time,
Best,
Arnold
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