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<p>Hi Paul,</p>
<p>Thanks a lot. Your .box file is also running. Mine is not... <br>
</p>
<p>I have only modified the dimensions of the mesh according to what
I need. Do you see anything wrong?<br>
</p>
<p>rbsissa2d.rea<br>
2 spatial dimension<br>
1 number of fields<br>
#========================================================<br>
# Here is a multibox example<br>
#========================================================<br>
#<br>
Box left lower<br>
-3 -2 nelx,nely,nelz for Box)<br>
0 1 1.0 x0 x1 ratio<br>
0 0.47 1.0 y0 y1 ratio<br>
v ,W ,SYM, , (bc's)<br>
Box left center<br>
-3 -3 nelx,nely,nelz for Box)<br>
0 1 1.0 x0 x1 ratio<br>
.47 .53 1.0 y0 y1 ratio<br>
v , , , , (bc's)<br>
Box left upper<br>
-3 -2 nelx,nely,nelz for Box)<br>
0 1 1.0 x0 x1 ratio<br>
.53 1 1.0 y0 y1 ratio<br>
v ,W , ,SYM, (bc's)<br>
Box center center<br>
-3 -3 nelx,nely,nelz for Box)<br>
1 1.47 1.0 x0 x1 ratio<br>
.47 .53 1.0 y0 y1 ratio<br>
, ,W ,W , (bc's)<br>
Box right lower<br>
-3 -4 nelx,nely,nelz for Box)<br>
1.47 9.47 1.0 x0 x1 ratio<br>
0 0.47 1.0 y0 y1 ratio<br>
,O ,SYM, , (bc's)<br>
Box right center<br>
-3 -4 nelx,nely,nelz for Box)<br>
1.47 9.47 1.0 x0 x1 ratio<br>
.47 .53 1.0 y0 y1 ratio<br>
,O , , , (bc's)<br>
Box right upper<br>
-3 -4 nelx,nely,nelz for Box)<br>
1.47 9.47 1.0 x0 x1 ratio<br>
.53 1 1.0 y0 y1 ratio<br>
,O , ,SYM, (bc's)<br>
</p>
<br>
<div class="moz-cite-prefix">Il 31/10/16 00:01,
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov">nek5000-users@lists.mcs.anl.gov</a> ha scritto:<br>
</div>
<blockquote
cite="mid:mailman.5391.1477886512.3602.nek5000-users@lists.mcs.anl.gov"
type="cite">
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charset=windows-1252">
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Hi Alessondro,
<div><br>
</div>
<div>Just to be clear, I attach the mbox.box file that I used.
It works with the current repo</div>
<div>version of genbox (and earlier ones).</div>
<div><br>
</div>
<div>Paul</div>
<div><br>
<div style="font-family: Times New Roman; color: #000000;
font-size: 16px">
<hr tabindex="-1">
<div id="divRpF668659" style="direction: ltr;"><font
face="Tahoma" color="#000000" size="2"><b>From:</b>
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users-bounces@lists.mcs.anl.gov">nek5000-users-bounces@lists.mcs.anl.gov</a>
[<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users-bounces@lists.mcs.anl.gov">nek5000-users-bounces@lists.mcs.anl.gov</a>] on behalf of
<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov">nek5000-users@lists.mcs.anl.gov</a>
[<a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov">nek5000-users@lists.mcs.anl.gov</a>]<br>
<b>Sent:</b> Sunday, October 30, 2016 10:32 PM<br>
<b>To:</b> <a class="moz-txt-link-abbreviated" href="mailto:nek5000-users@lists.mcs.anl.gov">nek5000-users@lists.mcs.anl.gov</a><br>
<b>Subject:</b> Re: [Nek5000-users] How to assembly
different geometry<br>
</font><br>
</div>
<div>
<p>Hi Paul,</p>
<p>Thank you so much. Are the BC's correct?</p>
<p>I have slightly modified your script and I get the
following error. What is wrong in your opinion?<br>
</p>
<p><br>
forrtl: severe (24): end-of-file during read, unit 99,
file /galileo/home/userexternal/aalla000/channel/box.tmp<br>
Image PC Routine
Line Source
<br>
libifcore.so.5 00007FD15E583947
Unknown Unknown Unknown<br>
libifcore.so.5 00007FD15E5C209F
Unknown Unknown Unknown<br>
libifcore.so.5 00007FD15E5C0538
Unknown Unknown Unknown<br>
genbox 0000000000416D0D
Unknown Unknown Unknown<br>
genbox 000000000040270C
Unknown Unknown Unknown<br>
genbox 000000000040134E
Unknown Unknown Unknown<br>
libc.so.6 00007FD15C6A0B15
Unknown Unknown Unknown<br>
genbox 0000000000401259
Unknown Unknown Unknown<br>
</p>
Thanks a lot,<br>
Alessandro<br>
<br>
<div class="moz-cite-prefix">Il 30/10/16 22:25, <a
moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">
nek5000-users@lists.mcs.anl.gov</a> ha scritto:<br>
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color:#000000; font-size:10pt">
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<div><br>
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Hi Alessandro,
<div><br>
</div>
<div> Here is a multi-box file example that will
generate something similar to what you're
<div>after. You can edit to suit your needs.</div>
<div><br>
</div>
<div>Paul</div>
<div><br>
</div>
<div>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
one2d.rea</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
2 spatial dimension</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
1 number of fields</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
#========================================================</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
# Here is a multibox example</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
#========================================================</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
#</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box left lower</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -2 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-2 -1 0.8 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-2 -.1 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
v ,W ,SYM, , (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box left center</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -3 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-2 -1 0.8 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-.1 .1 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
v , , , , (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box left upper</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -2 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-2 -1 0.8 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
.1 2 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
v ,W , ,SYM, (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box center center</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-4 -3 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-1 0 1.0 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-.1 .1 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
, ,W ,W , (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box right lower</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -2 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
0 2. 1.2 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-2 -.1 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
,O ,SYM, , (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box right center</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -3 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
0 2. 1.2 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-.1 .1 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
,O , , , (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
Box right upper</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
-3 -2 nelx,nely,nelz for
Box)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
0 2. 1.2 x0 x1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
.1 2 1.0 y0 y1 ratio</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
,O , ,SYM, (bc's)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
<br>
</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
.... PS ---- Be sure that you have 3 characters
(counting spaces)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
for each BC.</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
<br>
</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
The "right upper" "right center" etc. are just
comments.</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
"Box" is a keyword, however... (so to
distinguish from cylinder, etc.)</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
<br>
</p>
<p style="margin-right:0px; margin-left:0px;
font-size:12px; line-height:normal;
font-family:Courier">
<br>
</p>
</div>
<div><span style="font-family:'Segoe
UI',Helvetica,Arial,sans-serif;
font-size:medium;
background-color:rgb(255,255,255)"><br>
</span></div>
<div><br>
<div style="font-family:Times New Roman;
color:#000000; font-size:16px">
<hr tabindex="-1">
<div id="divRpF102409" style="direction:ltr"><font
face="Tahoma" color="#000000" size="2"><b>From:</b>
<a moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users-bounces@lists.mcs.anl.gov"
target="_blank">
nek5000-users-bounces@lists.mcs.anl.gov</a>
[<a moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users-bounces@lists.mcs.anl.gov"
target="_blank">nek5000-users-bounces@lists.mcs.anl.gov</a>]
on behalf of
<a moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">
nek5000-users@lists.mcs.anl.gov</a> [<a
moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">nek5000-users@lists.mcs.anl.gov</a>]<br>
<b>Sent:</b> Sunday, October 30, 2016 3:09
PM<br>
<b>To:</b> <a moz-do-not-send="true"
class="moz-txt-link-abbreviated"
href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">
nek5000-users@lists.mcs.anl.gov</a><br>
<b>Subject:</b> Re: [Nek5000-users] How to
assembly different geometry<br>
</font><br>
</div>
<div>
<div>
<p style="margin:0px; font-size:12px;
font-family:Helvetica">I can think of two
options:</p>
<p style="margin:0px; font-size:12px;
font-family:Helvetica">- Create the three
different boxes with genbox and merge them
with nekmerge</p>
<p style="margin:0px; font-size:12px;
font-family:Helvetica">- Create the whole
mesh with your favorite meshing tool,
export it as EXODUSII and use exo2nek</p>
</div>
<div><br>
</div>
<span id="OLK_SRC_BODY_SECTION">
<div style="font-family:Calibri;
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solid; border-right:medium none;
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<span style="font-weight:bold">Von: </span><<a
moz-do-not-send="true"
href="mailto:nek5000-users-bounces@lists.mcs.anl.gov"
target="_blank">nek5000-users-bounces@lists.mcs.anl.gov</a>>
on behalf of <<a moz-do-not-send="true"
href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a>><br>
<span style="font-weight:bold">Antworten
an: </span><<a
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href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">nek5000-users@lists.mcs.anl.gov</a>><br>
<span style="font-weight:bold">Datum: </span>Sunday,
October 30, 2016 at 10:26 PM<br>
<span style="font-weight:bold">An: </span><<a
moz-do-not-send="true"
href="mailto:nek5000-users@lists.mcs.anl.gov"
target="_blank">nek5000-users@lists.mcs.anl.gov</a>><br>
<span style="font-weight:bold">Betreff: </span>[Nek5000-users]
How to assembly different geometry<br>
</div>
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<div>
<div bgcolor="#FFFFFF">
<p>Hi All, </p>
<pre style="white-space:pre-wrap; color:rgb(0,0,0); font-style:normal; font-weight:normal; letter-spacing:normal; orphans:2; text-align:start; text-indent:0px; text-transform:none; widows:2; word-spacing:0px">I would like to generate a mesh as Figure 2 in
<a moz-do-not-send="true" href="http://www.mathematics.uh.edu/docs/math/NASC-preprint-series/2015_2016/Preprint_No16-54.pdf" target="_blank">http://www.mathematics.uh.edu/docs/math/NASC-preprint-series/2015_2016/Preprint_No16-54.pdf</a>
If I build three different boxes, how can I then assemble them? Could anyone please help me?
Thanks,
Alessandro</pre>
<br>
<pre class="moz-signature" cols="72">--
Dr Alessandro Alla
Florida State University
Department of Scienfitic Computing
400 Dirac Science Library
Tallahassee FL 32306-4120
Room: 462
Phone: +1 8506441010
E-Mail: <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="mailto:aalla@fsu.edu" target="_blank">aalla@fsu.edu</a>
Skype: alessandro.alla
<a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="http://www.alessandroalla.com" target="_blank">www.alessandroalla.com</a></pre>
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<pre class="moz-signature" cols="72">--
Dr Alessandro Alla
Florida State University
Department of Scienfitic Computing
400 Dirac Science Library
Tallahassee FL 32306-4120
Room: 462
Phone: +1 8506441010
E-Mail: <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="mailto:aalla@fsu.edu" target="_blank">aalla@fsu.edu</a>
Skype: alessandro.alla
<a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="http://www.alessandroalla.com" target="_blank">www.alessandroalla.com</a></pre>
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<pre class="moz-signature" cols="72">--
Dr Alessandro Alla
Florida State University
Department of Scienfitic Computing
400 Dirac Science Library
Tallahassee FL 32306-4120
Room: 462
Phone: +1 8506441010
E-Mail: <a class="moz-txt-link-abbreviated" href="mailto:aalla@fsu.edu">aalla@fsu.edu</a>
Skype: alessandro.alla
<a class="moz-txt-link-abbreviated" href="http://www.alessandroalla.com">www.alessandroalla.com</a></pre>
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