<div dir="ltr">Yes it is. It almost totally correct the problem. <br>I can visualize the flow pattern now.<br><div><div class="gmail_extra">But fonction of movie does not work yet. <br><br></div><div class="gmail_extra">Still thank you very much.<br>
<br></div><div class="gmail_extra">I just download the visit executable file. The version for ubuntu 11.04 visit2_6_3.linux-x86_64-ubuntu11.tar.gz<br></div><div class="gmail_extra">There is not version for 12.04 available. <br>
<br></div><div class="gmail_extra">nekb output eddy_uv.fld01 .... eddy_uv.fld12<br></div><div class="gmail_extra"><br></div><div class="gmail_extra">I created the metadata file called "eddy_uv.nek2d" <br><br>NEK5000<br>
version: 1.0<br>filetemplate: eddy_uv.fld%02d<br>firsttimestep: 1<br>numtimesteps: 10<br><br></div><div class="gmail_extra">I loaded it into visit, and choose the pressure contour, I got nothing on the screen. <br></div>
<div class="gmail_extra">It seems that visit do not see the nek output file file<br></div><div class="gmail_extra"><br></div><div class="gmail_extra">What is the problem?<br><br></div><div class="gmail_extra">Thank you very much!<br>
<br></div><div class="gmail_extra">Tubois<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Sun, Oct 20, 2013 at 5:59 PM, <span dir="ltr"><<a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><p dir="ltr">Hi Tubois</p>
<p dir="ltr">I had a similar problem when installing on an Ubuntu 12.04 machine (I am not sure which OS you are using) The problem was solved by installing the following packages:</p>
<p dir="ltr">mesa-utils<br>
libx11-* <br>
libxt-dev <br>
xfonts-100dpi <br>
xfonts-100dpi-transcoded <br>
xfonts-75dpi <br>
xfonts-75dpi-transcoded</p>
<p dir="ltr">Perhaps this will help you determine what packages need to be installed on your system.</p>
<p dir="ltr">Brandon</p>
<div class="gmail_quote">On Oct 20, 2013 3:03 AM, <<a href="mailto:nek5000-users-request@lists.mcs.anl.gov" target="_blank">nek5000-users-request@lists.mcs.anl.gov</a>> wrote:<br type="attribution"><blockquote style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
Send Nek5000-users mailing list submissions to<br>
<a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a><br>
<br>
To subscribe or unsubscribe via the World Wide Web, visit<br>
<a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
or, via email, send a message with subject or body 'help' to<br>
<a href="mailto:nek5000-users-request@lists.mcs.anl.gov" target="_blank">nek5000-users-request@lists.mcs.anl.gov</a><br>
<br>
You can reach the person managing the list at<br>
<a href="mailto:nek5000-users-owner@lists.mcs.anl.gov" target="_blank">nek5000-users-owner@lists.mcs.anl.gov</a><br>
<br>
When replying, please edit your Subject line so it is more specific<br>
than "Re: Contents of Nek5000-users digest..."<br>
<br>
<br>
Today's Topics:<br>
<br>
1. Re: postx black window (<a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a>)<br>
<br>
<br>
----------------------------------------------------------------------<br>
<br>
Message: 1<br>
Date: Sun, 20 Oct 2013 12:03:26 +0200<br>
From: <a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a><br>
To: <a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a><div class="im"><br>
Subject: Re: [Nek5000-users] postx black window<br></div>
Message-ID:<br>
<<a href="mailto:mailman.2996.1382263412.3278.nek5000-users@lists.mcs.anl.gov" target="_blank">mailman.2996.1382263412.3278.nek5000-users@lists.mcs.anl.gov</a>><br>
Content-Type: text/plain; charset="iso-8859-1"<div><div class="h5"><br>
<br>
Sorry to bother people in the list for this kind of naive question.<br>
<br>
I tried postx on two computers, one my laptop, one cluster in my<br>
laboratory.<br>
<br>
I got the same screen. It seems to be some graphics issue with the system.<br>
<br>
You can find the screenshot attached here.<br>
<br>
So what should I do? Thank you very much!<br>
<br>
Tubois<br>
<br>
On Sun, Oct 20, 2013 at 10:40 AM, <<a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a>> wrote:<br>
<br>
> Hi Paul,<br>
><br>
> Thank you for your response.<br>
><br>
> I already put PATH = ~/bin:$PATH in ~/.bashrc<br>
> running nekb is not a problem, the logfile gives the right results by<br>
> using nekb or nekbmpi<br>
> so the computation is ok.<br>
><br>
> The question lies on postx<br>
> I typed postx on the command line, then a black window appears, on the top<br>
> of which there is "Nekton".<br>
> but I do not see any sidebar<br>
><br>
> And on the terminal, it asks "Enter Session Name"<br>
><br>
> I left click the window with the cursor , and then "return" on the keyboard<br>
> it returns on the terminal<br>
><br>
> Enter Session Name<br>
> Beginning<br>
> Session<br>
><br>
> renaming <a href="http://SESSION.NAME" target="_blank">SESSION.NAME</a> <a href="http://SESSION.NAME" target="_blank">SESSION.NAME</a>~<br>
> Session<br>
> name:<br>
><br>
> ** ERROR ** Can't open file .rea<br>
> Enter Session Name<br>
><br>
> XIO: fatal IO error 11 (Resource temporarily unavailable) on X server<br>
> ":0.0"<br>
> after 235 requests (235 known processed) with 0 events remaining.<br>
><br>
> What is wrong here?<br>
><br>
> Thank you very much !<br>
><br>
> Tubois<br>
><br>
> On Sun, Oct 20, 2013 at 1:57 AM, <<a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a>> wrote:<br>
><br>
>><br>
>> The easiest thing is to copy the nekb script to your working directory.<br>
>><br>
>> There should also be a .soft file or something where you can add<br>
>><br>
>> PATH = ~/bin:$PATH<br>
>><br>
>> to get your bin directory into your path.<br>
>><br>
>> hth, Paul<br>
>><br>
>><br>
>><br>
>> ----- Original Message -----<br>
>> From: <a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a><br>
>> To: <a href="mailto:nek5000-users@lists.mcs.anl.gov" target="_blank">nek5000-users@lists.mcs.anl.gov</a><br>
>> Sent: Saturday, October 19, 2013 6:19:23 PM<br>
>> Subject: [Nek5000-users] postx black window<br>
>><br>
>><br>
>><br>
>><br>
>> Hello,<br>
>><br>
>><br>
>> I am totally new to nek5000. I started with the pdf online to the case<br>
>> eddy_uv<br>
>><br>
>> The computation seems ok, when I check the tail, I got the same results<br>
>> as in the pdf online.<br>
>><br>
>><br>
>> However, when I type postx<br>
>><br>
>> I just got a black window, without any sidebar menu.<br>
>><br>
>><br>
>> In fact, when I compiled the tools in /nek5000_svn/trunck/tools/.<br>
>><br>
>> I typed ./maketools all<br>
>><br>
>> I got a lot of warnings, like<br>
>><br>
>> CALL ZWGJD (ZD,WD,NP,ALPHAD,BETAD)<br>
>> 1<br>
>> Warning: Type mismatch in argument 'alpha' at (1); passed REAL(4) to<br>
>> REAL(8)<br>
>> gfortran -mcmodel=medium -c mxm44f2.f<br>
>> gcc -mcmodel=medium -c -DUNDERSCORE byte.c<br>
>> gfortran -mcmodel=medium -c int_tp_gbox.f<br>
>> int_tp_gbox.f:574.28:<br>
>><br>
>><br>
>> But at the end, the compilation seems accomplished.<br>
>><br>
>><br>
>> So what is wrong with my installation? Thank you very much!<br>
>><br>
>><br>
>> Tubois Gao<br>
>><br>
>><br>
>><br>
>><br>
>><br>
>><br>
>><br>
>> _______________________________________________<br>
>> Nek5000-users mailing list<br>
>> <a href="mailto:Nek5000-users@lists.mcs.anl.gov" target="_blank">Nek5000-users@lists.mcs.anl.gov</a><br>
>> <a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
>> _______________________________________________<br>
>> Nek5000-users mailing list<br>
>> <a href="mailto:Nek5000-users@lists.mcs.anl.gov" target="_blank">Nek5000-users@lists.mcs.anl.gov</a><br>
>> <a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
>><br>
><br>
><br>
> _______________________________________________<br>
> Nek5000-users mailing list<br>
> <a href="mailto:Nek5000-users@lists.mcs.anl.gov" target="_blank">Nek5000-users@lists.mcs.anl.gov</a><br>
> <a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
><br>
><br></div></div>
-------------- next part --------------<br>
An HTML attachment was scrubbed...<br>
URL: <<a href="http://lists.mcs.anl.gov/pipermail/nek5000-users/attachments/20131020/a1c1fd7b/attachment.html" target="_blank">http://lists.mcs.anl.gov/pipermail/nek5000-users/attachments/20131020/a1c1fd7b/attachment.html</a>><br>
-------------- next part --------------<br>
A non-text attachment was scrubbed...<br>
Name: Screenshot from 2013-10-20 11:58:26.png<br>
Type: image/png<br>
Size: 23105 bytes<br>
Desc: not available<br>
URL: <<a href="http://lists.mcs.anl.gov/pipermail/nek5000-users/attachments/20131020/a1c1fd7b/attachment.png" target="_blank">http://lists.mcs.anl.gov/pipermail/nek5000-users/attachments/20131020/a1c1fd7b/attachment.png</a>><br>
<br>
------------------------------<div class="im"><br>
<br>
_______________________________________________<br>
Nek5000-users mailing list<br>
<a href="mailto:Nek5000-users@lists.mcs.anl.gov" target="_blank">Nek5000-users@lists.mcs.anl.gov</a><br>
<a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
<br>
<br></div>
End of Nek5000-users Digest, Vol 56, Issue 20<br>
*********************************************<br>
</blockquote></div>
<br>_______________________________________________<br>
Nek5000-users mailing list<br>
<a href="mailto:Nek5000-users@lists.mcs.anl.gov">Nek5000-users@lists.mcs.anl.gov</a><br>
<a href="https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users</a><br>
<br></blockquote></div><br><br></div></div></div>