[Nek5000-users] Error compiling new Nek5000

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Thu Dec 21 02:58:58 CST 2017


The realclean option was deleted in 17.0. There is just clean.

-----Original message-----
> From:nek5000-users at lists.mcs.anl.gov <nek5000-users at lists.mcs.anl.gov>
> Sent: Thursday 21st December 2017 9:57
> To: nek5000-users at lists.mcs.anl.gov
> Subject: Re: [Nek5000-users] Error compiling new Nek5000
> 
> Have you tried doing "makenek realclean" and then compiling
> with "makenek".
> 
> NN.
> 
> 
> On Thursday 21 December 2017 09:42 AM, nek5000-users at lists.mcs.anl.gov 
> wrote:
> > Somehow gslib gets compiled with icc instead of mpicc. Can you try the following:
> >
> > export CC=mpicc
> > export FC=mpif77
> > makenek clean (clean 3rd party as well)
> > makenek
> >
> > -----Original message-----
> >> From:nek5000-users at lists.mcs.anl.gov <nek5000-users at lists.mcs.anl.gov>
> >> Sent: Thursday 21st December 2017 9:14
> >> To: nek5000-users <nek5000-users at lists.mcs.anl.gov>
> >> Subject: Re: [Nek5000-users] Error compiling new Nek5000
> >>
> >> I think I am using mpif77. Heres my compiler file attached.
> >>
> >> Thanks,
> >> Saikat
> >> <br clear="all" />Saikat Mukherjee,
> >> PhD Student,
> >> Paul Research Group - http://www.me.vt.edu/mpaul/ <http://www.me.vt.edu/mpaul/>
> >> Engineering Science and Mechanics,
> >> Virginia Tech.
> >>
> >> On Thu, Dec 21, 2017 at 2:46 AM,  <nek5000-users at lists.mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>> wrote:
> >> Your compiler does not find the include file mpi.h
> >> Have you tried to use the MPI wrappers like mpif77/mpicc instead of ifort/icc.
> >>
> >> -----Original message-----
> >>> From:nek5000-users at lists.mcs.anl.gov <mailto:From%3Anek5000-users at lists.mcs.anl.gov> <nek5000-users at lists.mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>
> >>> Sent: Thursday 21st December 2017 8:27
> >>> To: nek5000-users <nek5000-users at lists.mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>
> >>> Subject: [Nek5000-users] Error compiling new Nek5000
> >>>
> >>> Hello all,
> >>>
> >>> I am having errors compiling the new Nek5000. I am trying to run nekton in a unix cluster. I get the following error, the log file being attached -
> >>>
> >>> src/comm.h(65): catastrophic error: cannot open source file "mpi.h"
> >>>    #include <mpi.h>
> >>>
> >>> Thanks,
> >>>
> >>> Saikat
> >>>
> >>> Saikat Mukherjee,
> >>> PhD Student,
> >>> Paul Research Group - http://www.me.vt.edu/mpaul/ <http://www.me.vt.edu/mpaul/> <http://www.me.vt.edu/mpaul/ <http://www.me.vt.edu/mpaul/>>
> >>> Engineering Science and Mechanics,
> >>> Virginia Tech.
> >>> _______________________________________________
> >>> Nek5000-users mailing list
> >>> Nek5000-users at lists.mcs.anl.gov <mailto:Nek5000-users at lists.mcs.anl.gov>
> >>> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users <https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users>
> >> _______________________________________________
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> >>
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