[Nek5000-users] Running NekExamples

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Tue Aug 2 14:01:59 CDT 2016


Are there any errors prior to the message "Successfully compiled Nek5000"?
Equivalently, are there any errors in compiler.out?

Best,
Ron

On Tue, Aug 2, 2016 at 1:58 PM, <nek5000-users at lists.mcs.anl.gov> wrote:

> Hello,
>
> Thank you for the reply. I had tried specifying the VERBOSE_TESTS as
> mentioned earlier but I don't see any new command line output.
>
> I am able to see that the VERBOSE_TESTS setting is picked up, i.e.
>
> Getting setup options...
>     Using F77="gfortran"
>     Using CC="gcc"
>     Using IFMPI="false"
>     Using VERBOSE_TESTS="true"
>     Using SOURCE_ROOT at ~/github/Nek5000
>     Using EXAMPLES_ROOT at ~/github/NekExamples
>     Using TOOLS_ROOT at ~/github/Nek5000/tools
>     Using TOOLS_BIN at ~/github/Nek5000/bin
>
> But I still get the same error message and output as before, i.e. that the
> .sch file is not found and so the running process just stops. Any thoughts?
>
>
>
>
> On Tue, Aug 2, 2016 at 11:59 AM, <nek5000-users at lists.mcs.anl.gov> wrote:
>
>> Good morning!
>>
>> 1) It looks like some Nek5000 files keep getting rebuilt each time I
>>> execute the above command, even if they have been built before.
>>
>>
>> Yes, this is intentional.  NekTests.py is used primarily for software
>> testing.  We want to ensure the tests are reproducible, so Nek5000 is built
>> from scratch every single time.
>>
>> Regarding (2), could you set VERBOSE_TESTS="true" in your environment and
>> let us know what errors you see?
>>
>> Sorry that VERBOSE_TESTS is currently undocumented; I will document it in
>> the README as soon as possible.
>>
>> Best wishes,
>> Ron Rahaman
>>
>> Argonne National Laboratory, Math and Computer Science Division
>> University of Chicago, Department of Computer Science
>>
>> On Tue, Aug 2, 2016 at 10:06 AM, <nek5000-users at lists.mcs.anl.gov> wrote:
>>
>>> Hello,
>>>
>>> I am trying to run a standalone Nek5000 Example. I have Nek5000
>>> installed and I am following the Examples instructions from
>>> https://github.com/Nek5000/NekExamples
>>>
>>> When I try to run any particular example, using:
>>>
>>> python -m 'unittest' NekTests.ConjHt
>>>
>>> I face two issues:
>>>
>>> 1) It looks like some Nek5000 files keep getting rebuilt each time I
>>> execute the above command, even if they have been built before.
>>>
>>> 2) I always get an error:
>>>
>>> Successfully compiled nek5000!
>>> Running nek5000...
>>>     Using command "~/github/NekExamples/conj_ht/nek5000"
>>>     Using working directory "~/github/NekExamples/conj_ht"
>>>     Using .rea file "conj_ht"
>>>     Could not remove ~/github/NekExamples/conj_ht/conj_ht.sch: [Errno 2]
>>> No such file or directory: '~/github/NekExamples/conj_ht/conj_ht.sch'
>>> Could not successfully run nek5000! Caught error: [Errno 2] No such file
>>> or directory
>>>
>>> I tried looking through the Makefiles and the Python script but cannot
>>> see where the sch file is specified. Also, I tried creating a dummy sch
>>> file so that the build can find and remove it, but that didn't work either.
>>>
>>> Please advise on how I can resolve the errors.
>>>
>>>
>>> Thanks,
>>> K.N.Ramachandran
>>> Ph: 814-441-4279
>>>
>>> _______________________________________________
>>> Nek5000-users mailing list
>>> Nek5000-users at lists.mcs.anl.gov
>>> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users
>>>
>>>
>>
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>>
>>
>
>
> --
> K.N.Ramachandran
> Ph: 814-441-4279
>
> _______________________________________________
> Nek5000-users mailing list
> Nek5000-users at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users
>
>
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