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<div><font face="Arial" size="2"><span class="763314316-17082011">Dear All,</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011"></span></font> </div>
<div><font face="Arial" size="2"><span class="763314316-17082011">I've set the environment as shown in the log file below. Can anyone please help me in resolving this configure error.</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011"></span></font> </div>
<div><font face="Arial" size="2"><span class="763314316-17082011">Thanking you in advance.</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011"></span></font> </div>
<div><font face="Arial" size="2"><span class="763314316-17082011">Surya</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011"></span></font> </div>
<div><font face="Arial" size="2"><span class="763314316-17082011">##############################################</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011">Configuring MPICH2 version 1.3 with '--prefix=/opt/pgi/linux86-64/2011/mpi/mpich2' 'CC=pgcc' 'CFLAGS=-fast' 'FC=pgfortran' 'FCFLAGS=-fast' 'CXX=pgcpp' 'CXXFLAGS=-fast'<br>
Running on system: Linux ndextmod01.ops.erm55.com 2.6.18-238.12.1.el5 #1 SMP Tue May 31 13:22:04 EDT 2011 x86_64 x86_64 x86_64 GNU/Linux<br>
checking for C compiler default output file name... a.out<br>
checking whether the C compiler works... yes<br>
checking whether we are cross compiling... no<br>
checking for suffix of executables... <br>
checking for suffix of object files... o<br>
checking whether we are using the GNU C compiler... no<br>
checking whether pgcc accepts -g... yes<br>
checking for pgcc option to accept ISO C89... none needed<br>
checking how to run the C preprocessor... pgcc -E<br>
checking build system type... x86_64-unknown-linux-gnu<br>
checking host system type... x86_64-unknown-linux-gnu<br>
checking for grep that handles long lines and -e... /bin/grep<br>
checking for fgrep... /bin/grep -F<br>
Executing mpich2prereq in /root/MPICH2/mpich2-1.3/src/mpid/ch3 with <br>
Executing mpich2prereq in /root/MPICH2/mpich2-1.3/src/mpid/ch3/channels/nemesis<br>
configure: ===== configuring src/mpl =====<br>
configure: executing: /root/MPICH2/mpich2-1.3/src/mpl/configure '--prefix=/opt/pgi/linux86-64/2011/mpi/mpich2' 'CC=pgcc' 'CFLAGS=-fast ' 'FC=pgfortran' 'CFLAGS=-fast ' 'CXX=pgcpp' 'CXXFLAGS=-fast ' --disable-option-checking<br>
checking for a BSD-compatible install... /usr/bin/install -c<br>
checking whether build environment is sane... yes<br>
checking for a thread-safe mkdir -p... /bin/mkdir -p<br>
checking for gawk... gawk<br>
checking whether make sets $(MAKE)... yes<br>
checking build system type... x86_64-unknown-linux-gnu<br>
checking host system type... x86_64-unknown-linux-gnu<br>
checking for style of include used by make... GNU<br>
checking for gcc... pgcc<br>
checking for C compiler default output file name... a.out<br>
checking whether the C compiler works... yes<br>
checking whether we are cross compiling... no<br>
checking for suffix of executables... <br>
checking for suffix of object files... o<br>
checking whether we are using the GNU C compiler... no<br>
checking whether pgcc accepts -g... yes<br>
checking for pgcc option to accept ISO C89... none needed<br>
checking dependency style of pgcc... none<br>
checking for a sed that does not truncate output... /bin/sed<br>
checking for grep that handles long lines and -e... /bin/grep<br>
checking for egrep... /bin/grep -E<br>
checking for fgrep... /bin/grep -F<br>
checking for non-GNU ld... /usr/bin/ld<br>
checking if the linker (/usr/bin/ld) is GNU ld... yes<br>
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B<br>
checking the name lister (/usr/bin/nm -B) interface... BSD nm<br>
checking whether ln -s works... yes<br>
checking the maximum length of command line arguments... 98304<br>
checking whether the shell understands some XSI constructs... yes<br>
checking whether the shell understands "+="... yes<br>
checking for /usr/bin/ld option to reload object files... -r<br>
checking for objdump... objdump<br>
checking how to recognize dependent libraries... pass_all<br>
checking for ar... ar<br>
checking for strip... strip<br>
checking for ranlib... ranlib<br>
checking command to parse /usr/bin/nm -B output from pgcc object... ok<br>
checking how to run the C preprocessor... pgcc -E<br>
checking for ANSI C header files... yes<br>
checking for sys/types.h... yes<br>
checking for sys/stat.h... yes<br>
checking for stdlib.h... yes<br>
checking for string.h... yes<br>
checking for memory.h... yes<br>
checking for strings.h... yes<br>
checking for inttypes.h... yes<br>
checking for stdint.h... yes<br>
checking for unistd.h... yes<br>
checking for dlfcn.h... yes<br>
checking for objdir... .libs<br>
checking for pgcc option to produce PIC... -fpic -DPIC<br>
checking if pgcc PIC flag -fpic -DPIC works... yes<br>
checking if pgcc static flag -Bstatic works... yes<br>
checking if pgcc supports -c -o file.o... yes<br>
checking if pgcc supports -c -o file.o... (cached) yes<br>
checking whether the pgcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes<br>
checking dynamic linker characteristics... GNU/Linux ld.so<br>
checking how to hardcode library paths into programs... immediate<br>
checking whether stripping libraries is possible... yes<br>
checking if libtool supports shared libraries... yes<br>
checking whether to build shared libraries... no<br>
checking whether to build static libraries... yes<br>
checking whether we are using the GNU C compiler... (cached) no<br>
checking whether pgcc accepts -g... (cached) yes<br>
checking for pgcc option to accept ISO C89... (cached) none needed<br>
checking dependency style of pgcc... (cached) none<br>
checking for an ANSI C-conforming const... yes<br>
checking for C/C++ restrict keyword... __restrict<br>
checking for variable argument list macro functionality... yes<br>
checking stdio.h usability... yes<br>
checking stdio.h presence... yes<br>
checking for stdio.h... yes<br>
checking for stdlib.h... (cached) yes<br>
checking for string.h... (cached) yes<br>
checking stdarg.h usability... yes<br>
checking stdarg.h presence... yes<br>
checking for stdarg.h... yes<br>
checking ctype.h usability... yes<br>
checking ctype.h presence... yes<br>
checking for ctype.h... yes<br>
checking for inttypes.h... (cached) yes<br>
checking for stdint.h... (cached) yes<br>
checking valgrind.h usability... no<br>
checking valgrind.h presence... no<br>
checking for valgrind.h... no<br>
checking memcheck.h usability... no<br>
checking memcheck.h presence... no<br>
checking for memcheck.h... no<br>
checking valgrind/valgrind.h usability... no<br>
checking valgrind/valgrind.h presence... no<br>
checking for valgrind/valgrind.h... no<br>
checking valgrind/memcheck.h usability... no<br>
checking valgrind/memcheck.h presence... no<br>
checking for valgrind/memcheck.h... no<br>
checking helgrind.h usability... no<br>
checking helgrind.h presence... no<br>
checking for helgrind.h... no<br>
checking valgrind/helgrind.h usability... no<br>
checking valgrind/helgrind.h presence... no<br>
checking for valgrind/helgrind.h... no<br>
checking drd.h usability... no<br>
checking drd.h presence... no<br>
checking for drd.h... no<br>
checking valgrind/drd.h usability... no<br>
checking valgrind/drd.h presence... no<br>
checking for valgrind/drd.h... no<br>
checking whether the valgrind headers are broken or too old... yes<br>
checking for strdup... yes<br>
checking whether strdup needs a declaration... no<br>
checking for snprintf... yes<br>
checking whether snprintf needs a declaration... no<br>
checking for strncmp... yes<br>
checking whether strncmp needs a declaration... no<br>
checking for putenv... yes<br>
checking whether putenv needs a declaration... no<br>
configure: creating ./config.status<br>
config.status: creating Makefile<br>
config.status: creating localdefs<br>
config.status: creating include/config.h<br>
config.status: include/config.h is unchanged<br>
config.status: executing depfiles commands<br>
config.status: executing libtool commands<br>
config.status: executing include/mplconfig.h commands<br>
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines<br>
config.status: include/mplconfig.h is unchanged<br>
configure: ===== done with src/mpl configure =====<br>
configure: ===== configuring src/openpa =====<br>
configure: executing: /root/MPICH2/mpich2-1.3/src/openpa/configure --with-atomic-primitives=auto_allow_emulation '--prefix=/opt/pgi/linux86-64/2011/mpi/mpich2' 'CC=pgcc' 'CFLAGS=-fast ' 'FC=pgfortran' 'CFLAGS=-fast ' 'CXX=pgcpp' 'CXXFLAGS=-fast ' --disable-option-checking<br>
checking for a BSD-compatible install... /usr/bin/install -c<br>
checking whether build environment is sane... yes<br>
checking for a thread-safe mkdir -p... /bin/mkdir -p<br>
checking for gawk... gawk<br>
checking whether make sets $(MAKE)... yes<br>
checking build system type... x86_64-unknown-linux-gnu<br>
checking host system type... x86_64-unknown-linux-gnu<br>
checking for style of include used by make... GNU<br>
checking for gcc... pgcc<br>
checking for C compiler default output file name... a.out<br>
checking whether the C compiler works... yes<br>
checking whether we are cross compiling... no<br>
checking for suffix of executables... <br>
checking for suffix of object files... o<br>
checking whether we are using the GNU C compiler... no<br>
checking whether pgcc accepts -g... yes<br>
checking for pgcc option to accept ISO C89... none needed<br>
checking dependency style of pgcc... none<br>
checking for a sed that does not truncate output... /bin/sed<br>
checking for grep that handles long lines and -e... /bin/grep<br>
checking for egrep... /bin/grep -E<br>
checking for fgrep... /bin/grep -F<br>
checking for non-GNU ld... /usr/bin/ld<br>
checking if the linker (/usr/bin/ld) is GNU ld... yes<br>
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B<br>
checking the name lister (/usr/bin/nm -B) interface... BSD nm<br>
checking whether ln -s works... yes<br>
checking the maximum length of command line arguments... 98304<br>
checking whether the shell understands some XSI constructs... yes<br>
checking whether the shell understands "+="... yes<br>
checking for /usr/bin/ld option to reload object files... -r<br>
checking for objdump... objdump<br>
checking how to recognize dependent libraries... pass_all<br>
checking for ar... ar<br>
checking for strip... strip<br>
checking for ranlib... ranlib<br>
checking command to parse /usr/bin/nm -B output from pgcc object... ok<br>
checking how to run the C preprocessor... pgcc -E<br>
checking for ANSI C header files... yes<br>
checking for sys/types.h... yes<br>
checking for sys/stat.h... yes<br>
checking for stdlib.h... yes<br>
checking for string.h... yes<br>
checking for memory.h... yes<br>
checking for strings.h... yes<br>
checking for inttypes.h... yes<br>
checking for stdint.h... yes<br>
checking for unistd.h... yes<br>
checking for dlfcn.h... yes<br>
checking for objdir... .libs<br>
checking for pgcc option to produce PIC... -fpic -DPIC<br>
checking if pgcc PIC flag -fpic -DPIC works... yes<br>
checking if pgcc static flag -Bstatic works... yes<br>
checking if pgcc supports -c -o file.o... yes<br>
checking if pgcc supports -c -o file.o... (cached) yes<br>
checking whether the pgcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes<br>
checking dynamic linker characteristics... GNU/Linux ld.so<br>
checking how to hardcode library paths into programs... immediate<br>
checking whether stripping libraries is possible... yes<br>
checking if libtool supports shared libraries... yes<br>
checking whether to build shared libraries... no<br>
checking whether to build static libraries... yes<br>
checking for gcc... (cached) pgcc<br>
checking whether we are using the GNU C compiler... (cached) no<br>
checking whether pgcc accepts -g... (cached) yes<br>
checking for pgcc option to accept ISO C89... (cached) none needed<br>
checking dependency style of pgcc... (cached) none<br>
checking whether to enable assertions... yes<br>
checking pthread.h usability... yes<br>
checking pthread.h presence... yes<br>
checking for pthread.h... yes<br>
checking atomic.h usability... no<br>
checking atomic.h presence... no<br>
checking for atomic.h... no<br>
checking intrin.h usability... yes<br>
checking intrin.h presence... yes<br>
checking for intrin.h... yes<br>
checking for inttypes.h... (cached) yes<br>
checking for stdint.h... (cached) yes<br>
checking stddef.h usability... yes<br>
checking stddef.h presence... yes<br>
checking for stddef.h... yes<br>
checking for C/C++ restrict keyword... __restrict<br>
checking for inline... inline<br>
checking for an ANSI C-conforming const... yes<br>
checking for pthread_create in -lpthread... yes<br>
checking for pthread_yield... yes<br>
checking if 100 threads can be run at once... yes<br>
checking size of void *... 8<br>
checking size of int... 4<br>
checking if compiler rejects bogus asm statements... yes<br>
checking for support for gcc x86/x86_64 primitives... yes<br>
checking for support for gcc x86 primitives for pre-Pentium 4... yes<br>
checking for support for gcc ia64 primitives... no<br>
checking for support for gcc PowerPC atomics... no<br>
checking for support for gcc SiCortex atomics... no<br>
checking for support for gcc atomic intrinsics... no<br>
checking for support for Windows NT atomic intrinsics... no<br>
checking for support for Sun atomic operations library... no<br>
checking whether to enable strict fairness checks... no<br>
configure: creating ./config.status<br>
config.status: creating Makefile<br>
config.status: creating src/Makefile<br>
config.status: creating test/Makefile<br>
config.status: creating openpa.pc<br>
config.status: creating src/config.h<br>
config.status: src/config.h is unchanged<br>
config.status: executing depfiles commands<br>
config.status: executing libtool commands<br>
config.status: executing src/opa_config.h commands<br>
config.status: creating src/opa_config.h - prefix OPA for src/config.h defines<br>
config.status: src/opa_config.h is unchanged<br>
configure: ===== done with src/openpa configure =====<br>
sourcing /root/MPICH2/mpich2-1.3/src/pm/hydra/mpich2prereq<br>
checking whether the compiler defines __func__... yes<br>
checking whether the compiler defines __FUNC__... no<br>
checking whether the compiler sets __FUNCTION__... yes<br>
checking whether C compiler accepts option -O2... yes<br>
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes<br>
checking for type of weak symbol alias support... pragma weak<br>
checking whether __attribute__ ((weak)) allowed... yes<br>
checking whether __attribute__ ((weak_import)) allowed... yes<br>
checking whether __attribute__((weak,alias(...))) allowed... yes<br>
checking for multiple weak symbol support... yes<br>
configure: error: F90 and F90FLAGS are replaced by FC and FCFLAGS respectively in this configure, please unset F90/F90FLAGS and set FC/FCFLAGS instead and rerun configure again.<br>
</span></font></div>
<div><font face="Arial" size="2"><span class="763314316-17082011"></span></font> </div>
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