This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by hwloc configure 1.1.1rc4, which was generated by GNU Autoconf 2.63. Invocation command line was $ /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/configure --enable-embedded-mode --prefix=/neem2/huangwei/apps/mpich2-1.3.2p1 CC=pgcc FC=pgf90 --disable-option-checking CFLAGS= -O2 LDFLAGS= -lnsl LIBS= LIBS=-lrt -lpthread CPPFLAGS= -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers --disable-option-checking ## --------- ## ## Platform. ## ## --------- ## hostname = neem uname -m = x86_64 uname -r = 2.6.18-238.9.1.el5 uname -s = Linux uname -v = #1 SMP Fri Mar 18 12:42:39 EDT 2011 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: . PATH: /neem2/huangwei/apps/bin PATH: /bin PATH: /usr/bin PATH: /sbin PATH: /usr/sbin PATH: /usr/X11R6/bin PATH: /usr/local/bin PATH: /usr/local/ncl/bin PATH: /sw/bin PATH: /usr/pgi/bin-64 PATH: /usr/local/mpich-pgi/bin PATH: /neem2/huangwei/netcdf4/bin PATH: /neem/users/huangwei/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2284: checking build system type configure:2302: result: x86_64-unknown-linux-gnu configure:2324: checking host system type configure:2339: result: x86_64-unknown-linux-gnu configure:2361: checking target system type configure:2376: result: x86_64-unknown-linux-gnu configure:2422: checking for a BSD-compatible install configure:2490: result: /usr/bin/install -c configure:2501: checking whether build environment is sane configure:2561: result: yes configure:2702: checking for a thread-safe mkdir -p configure:2741: result: mkdir -p configure:2754: checking for gawk configure:2770: found /bin/gawk configure:2781: result: gawk configure:2792: checking whether make sets $(MAKE) configure:2814: result: yes configure:2891: checking how to create a ustar tar archive configure:2904: tar --version tar (GNU tar) 1.15.1 configure:2907: $? = 0 configure:2947: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:2950: $? = 0 configure:2954: tar -xf - &5 pgcc-Warning-Unknown switch: --version pgcc-Warning-No files to process configure:3380: $? = 0 configure:3387: pgcc -v >&5 pgcc-Warning-No files to process configure:3391: $? = 0 configure:3398: pgcc -V >&5 pgcc 6.2-5 64-bit target on x86-64 Linux Copyright 1989-2000, The Portland Group, Inc. All Rights Reserved. Copyright 2000-2006, STMicroelectronics, Inc. All Rights Reserved. configure:3402: $? = 0 configure:3425: checking for C compiler default output file name configure:3447: pgcc -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:3451: $? = 0 configure:3489: result: a.out configure:3508: checking whether the C compiler works configure:3518: ./a.out configure:3522: $? = 0 configure:3541: result: yes configure:3548: checking whether we are cross compiling configure:3550: result: no configure:3553: checking for suffix of executables configure:3560: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:3564: $? = 0 configure:3590: result: configure:3596: checking for suffix of object files configure:3622: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:3626: $? = 0 configure:3651: result: o configure:3655: checking whether we are using the GNU C compiler configure:3684: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0040-Illegal use of symbol, choke (conftest.c: 18) PGC-W-0156-Type not specified, 'int' assumed (conftest.c: 18) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:3691: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | /* end confdefs.h. */ | | int | main () | { | #ifndef __GNUC__ | choke me | #endif | | ; | return 0; | } configure:3708: result: no configure:3717: checking whether pgcc accepts -g configure:3747: pgcc -c -g -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:3754: $? = 0 configure:3855: result: yes configure:3872: checking for pgcc option to accept ISO C89 configure:3946: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-W-0261-no macro replacement within a character constant (conftest.c: 47) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with warnings configure:3953: $? = 0 configure:3976: result: none needed configure:4005: checking for style of include used by make configure:4033: result: GNU configure:4058: checking dependency style of pgcc configure:4168: result: none configure:4184: checking whether pgcc and cc understand -c and -o together configure:4219: pgcc -c conftest.c -o conftest2.o >&5 configure:4223: $? = 0 configure:4229: pgcc -c conftest.c -o conftest2.o >&5 configure:4233: $? = 0 configure:4244: cc -c conftest.c >&5 configure:4248: $? = 0 configure:4256: cc -c conftest.c -o conftest2.o >&5 configure:4260: $? = 0 configure:4266: cc -c conftest.c -o conftest2.o >&5 configure:4270: $? = 0 configure:4288: result: yes configure:4405: checking how to run the C preprocessor configure:4445: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:4452: $? = 0 configure:4483: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file ac_nonexistent.h (conftest.c: 13) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:4490: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | /* end confdefs.h. */ | #include configure:4523: result: pgcc -E configure:4552: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:4559: $? = 0 configure:4590: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file ac_nonexistent.h (conftest.c: 13) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:4597: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | /* end confdefs.h. */ | #include configure:4637: checking for grep that handles long lines and -e configure:4697: result: /bin/grep configure:4702: checking for egrep configure:4766: result: /bin/grep -E configure:4771: checking for ANSI C header files configure:4801: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4808: $? = 0 configure:4907: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:4911: $? = 0 configure:4917: ./conftest configure:4921: $? = 0 configure:4939: result: yes configure:4963: checking for sys/types.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for sys/stat.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for stdlib.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for string.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for memory.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for strings.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for inttypes.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for stdint.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:4963: checking for unistd.h configure:4984: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:4991: $? = 0 configure:5008: result: yes configure:5071: checking for pkg-config configure:5089: found /usr/bin/pkg-config configure:5101: result: /usr/bin/pkg-config configure:5126: checking pkg-config is at least version 0.9.0 configure:5129: result: yes configure:5161: checking hwloc building mode configure:5163: result: embedded configure:5192: hwloc builddir: /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc configure:5194: hwloc srcdir: /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc configure:5202: checking if want hwloc maintainer support configure:5237: result: disabled (embedded mode) configure:5243: checking for hwloc directory prefix configure:5245: result: (none) configure:5258: checking for hwloc symbol prefix configure:5282: result: hwloc_ configure:5310: checking for pgcc option to accept ISO C99 configure:5469: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-W-0170-Designated initializers are not supported (conftest.c: 148) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with warnings configure:5476: $? = 0 configure:5499: result: none needed configure:5542: checking minix/config.h usability configure:5559: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file minix/config.h (conftest.c: 59) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:5566: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:5580: result: no configure:5584: checking minix/config.h presence configure:5599: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file minix/config.h (conftest.c: 26) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:5606: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | /* end confdefs.h. */ | #include configure:5620: result: no configure:5653: checking for minix/config.h configure:5660: result: no configure:5691: checking whether it is safe to define __EXTENSIONS__ configure:5719: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:5726: $? = 0 configure:5741: result: yes configure:5790: checking size of void * configure:6095: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:6099: $? = 0 configure:6105: ./conftest configure:6109: $? = 0 configure:6135: result: 8 configure:6149: checking which OS support to include configure:6159: result: Linux configure:6271: checking which CPU support to include configure:6293: result: x86_64 configure:6313: checking size of unsigned long configure:6618: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:6622: $? = 0 configure:6628: ./conftest configure:6632: $? = 0 configure:6658: result: 8 configure:6677: checking size of unsigned int configure:6982: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:6986: $? = 0 configure:6992: ./conftest configure:6996: $? = 0 configure:7022: result: 4 configure:7042: checking for __attribute__ configure:7076: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7083: $? = 0 configure:7126: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7133: $? = 0 configure:7183: result: yes configure:7187: checking for __attribute__(aligned) configure:7217: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7224: $? = 0 configure:7345: result: yes configure:7357: checking for __attribute__(always_inline) configure:7387: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7394: $? = 0 configure:7515: result: yes configure:7524: checking for __attribute__(cold) configure:7557: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7564: $? = 0 configure:7685: result: yes configure:7694: checking for __attribute__(const) configure:7727: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7734: $? = 0 configure:7855: result: yes configure:7865: checking for __attribute__(deprecated) configure:7898: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:7905: $? = 0 configure:8026: result: yes configure:8046: checking for __attribute__(format) configure:8078: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8085: $? = 0 configure:8173: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8180: $? = 0 configure:8227: result: no configure:8233: checking for __attribute__(hot) configure:8266: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8273: $? = 0 configure:8394: result: yes configure:8403: checking for __attribute__(malloc) configure:8439: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8446: $? = 0 configure:8567: result: yes configure:8582: checking for __attribute__(may_alias) configure:8612: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8619: $? = 0 configure:8740: result: yes configure:8750: checking for __attribute__(no_instrument_function) configure:8780: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8787: $? = 0 configure:8908: result: yes configure:8933: checking for __attribute__(nonnull) configure:8966: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:8973: $? = 0 configure:9063: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9070: $? = 0 configure:9117: result: no configure:9124: checking for __attribute__(noreturn) configure:9163: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9170: $? = 0 configure:9291: result: yes configure:9300: checking for __attribute__(packed) configure:9335: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9342: $? = 0 configure:9463: result: yes configure:9472: checking for __attribute__(pure) configure:9505: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9512: $? = 0 configure:9633: result: yes configure:9659: checking for __attribute__(sentinel) configure:9691: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9698: $? = 0 configure:9788: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9795: $? = 0 configure:9842: result: no configure:9848: checking for __attribute__(unused) configure:9881: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:9888: $? = 0 configure:10009: result: yes configure:10034: checking for __attribute__(warn_unused_result) configure:10067: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:10074: $? = 0 configure:10168: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:10175: $? = 0 configure:10222: result: no configure:10229: checking for __attribute__(weak_alias) configure:10263: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:10270: $? = 0 configure:10391: result: yes configure:10523: checking if pgcc supports -fvisibility configure:10551: pgcc -o conftest -O2 -fvisibility=hidden -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden conftest.c: configure:10558: $? = 0 configure:10588: result: yes configure:10594: checking whether to enable visibility configure:10596: result: yes (via -fvisibility=hidden) configure:10622: WARNING: " -fvisibility=hidden" has been added to the hwloc CFLAGS configure:10630: checking for inline compatibility keyword configure:10653: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:10660: $? = 0 configure:10717: result: __inline__ configure:10734: checking for strncasecmp configure:10790: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:10797: $? = 0 configure:10819: result: yes configure:10829: checking whether function strncasecmp is declared configure:10853: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-W-0093-Type cast required for this conversion of constant (conftest.c: 97) PGC-W-0093-Type cast required for this conversion of constant (conftest.c: 97) PGC-S-0141-Wrong number of parameters to function (conftest.c: 97) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:10860: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | strncasecmp(1,2,3,4,5,6,7,8,9,10); | ; | return 0; | } configure:10872: result: yes configure:10896: checking for strftime configure:10952: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:10959: $? = 0 configure:10981: result: yes configure:10997: checking for setlocale configure:11053: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:11060: $? = 0 configure:11082: result: yes configure:11096: checking for stdint.h configure:11101: result: yes configure:11254: checking sys/mman.h usability configure:11271: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:11278: $? = 0 configure:11292: result: yes configure:11296: checking sys/mman.h presence configure:11311: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:11318: $? = 0 configure:11332: result: yes configure:11365: checking for sys/mman.h configure:11374: result: yes configure:11390: checking for KAFFINITY configure:11419: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11426: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (KAFFINITY)) | return 0; | ; | return 0; | } configure:11484: result: no configure:11494: checking for PROCESSOR_CACHE_TYPE configure:11523: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11530: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (PROCESSOR_CACHE_TYPE)) | return 0; | ; | return 0; | } configure:11588: result: no configure:11598: checking for CACHE_DESCRIPTOR configure:11627: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11634: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (CACHE_DESCRIPTOR)) | return 0; | ; | return 0; | } configure:11692: result: no configure:11702: checking for LOGICAL_PROCESSOR_RELATIONSHIP configure:11731: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11738: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (LOGICAL_PROCESSOR_RELATIONSHIP)) | return 0; | ; | return 0; | } configure:11796: result: no configure:11806: checking for RelationProcessorPackage configure:11835: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11842: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (RelationProcessorPackage)) | return 0; | ; | return 0; | } configure:11900: result: no configure:11910: checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION configure:11939: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:11946: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (SYSTEM_LOGICAL_PROCESSOR_INFORMATION)) | return 0; | ; | return 0; | } configure:12004: result: no configure:12014: checking for GROUP_AFFINITY configure:12043: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12050: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (GROUP_AFFINITY)) | return 0; | ; | return 0; | } configure:12108: result: no configure:12118: checking for PROCESSOR_RELATIONSHIP configure:12147: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12154: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (PROCESSOR_RELATIONSHIP)) | return 0; | ; | return 0; | } configure:12212: result: no configure:12222: checking for NUMA_NODE_RELATIONSHIP configure:12251: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12258: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (NUMA_NODE_RELATIONSHIP)) | return 0; | ; | return 0; | } configure:12316: result: no configure:12326: checking for CACHE_RELATIONSHIP configure:12355: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12362: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (CACHE_RELATIONSHIP)) | return 0; | ; | return 0; | } configure:12420: result: no configure:12430: checking for PROCESSOR_GROUP_INFO configure:12459: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12466: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (PROCESSOR_GROUP_INFO)) | return 0; | ; | return 0; | } configure:12524: result: no configure:12534: checking for GROUP_RELATIONSHIP configure:12563: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12570: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (GROUP_RELATIONSHIP)) | return 0; | ; | return 0; | } configure:12628: result: no configure:12638: checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX configure:12667: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12674: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX)) | return 0; | ; | return 0; | } configure:12732: result: no configure:12742: checking for PSAPI_WORKING_SET_EX_BLOCK configure:12771: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12778: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (PSAPI_WORKING_SET_EX_BLOCK)) | return 0; | ; | return 0; | } configure:12836: result: no configure:12846: checking for PSAPI_WORKING_SET_EX_INFORMATION configure:12875: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:12882: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof (PSAPI_WORKING_SET_EX_INFORMATION)) | return 0; | ; | return 0; | } configure:12940: result: no configure:12951: checking for main in -lgdi32 configure:12980: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lgdi32 -lrt -lpthread >&5 conftest.c: /usr/bin/ld: cannot find -lgdi32 configure:12987: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | | | int | main () | { | return main (); | ; | return 0; | } configure:13008: result: no configure:13030: checking windows.h usability configure:13047: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file windows.h (conftest.c: 99) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13054: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:13068: result: no configure:13072: checking windows.h presence configure:13087: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file windows.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13094: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include configure:13108: result: no configure:13141: checking for windows.h configure:13148: result: no configure:13180: checking sys/lgrp_user.h usability configure:13197: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file sys/lgrp_user.h (conftest.c: 99) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13204: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:13218: result: no configure:13222: checking sys/lgrp_user.h presence configure:13237: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file sys/lgrp_user.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13244: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include configure:13258: result: no configure:13291: checking for sys/lgrp_user.h configure:13300: result: no configure:13406: checking kstat.h usability configure:13423: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file kstat.h (conftest.c: 99) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13430: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:13444: result: no configure:13448: checking kstat.h presence configure:13463: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file kstat.h (conftest.c: 66) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13470: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | /* end confdefs.h. */ | #include configure:13484: result: no configure:13517: checking for kstat.h configure:13526: result: no configure:13611: checking whether _SC_NPROCESSORS_ONLN is declared configure:13641: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:13648: $? = 0 configure:13663: result: yes configure:13679: checking whether _SC_NPROCESSORS_CONF is declared configure:13709: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:13716: $? = 0 configure:13731: result: yes configure:13747: checking whether _SC_NPROC_ONLN is declared configure:13777: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0039-Use of undeclared variable _SC_NPROC_ONLN (conftest.c: 74) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:13784: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef _SC_NPROC_ONLN | (void) _SC_NPROC_ONLN; | #endif | | ; | return 0; | } configure:13799: result: no configure:13815: checking whether _SC_NPROC_CONF is declared configure:13845: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0039-Use of undeclared variable _SC_NPROC_CONF (conftest.c: 75) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:13852: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef _SC_NPROC_CONF | (void) _SC_NPROC_CONF; | #endif | | ; | return 0; | } configure:13867: result: no configure:13883: checking whether _SC_LARGE_PAGESIZE is declared configure:13913: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0039-Use of undeclared variable _SC_LARGE_PAGESIZE (conftest.c: 76) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:13920: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef _SC_LARGE_PAGESIZE | (void) _SC_LARGE_PAGESIZE; | #endif | | ; | return 0; | } configure:13935: result: no configure:13970: checking mach/mach_host.h usability configure:13987: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file mach/mach_host.h (conftest.c: 104) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:13994: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14008: result: no configure:14012: checking mach/mach_host.h presence configure:14027: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file mach/mach_host.h (conftest.c: 71) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:14034: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | /* end confdefs.h. */ | #include configure:14048: result: no configure:14081: checking for mach/mach_host.h configure:14090: result: no configure:14121: checking mach/mach_init.h usability configure:14138: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file mach/mach_init.h (conftest.c: 104) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:14145: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:14159: result: no configure:14163: checking mach/mach_init.h presence configure:14178: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file mach/mach_init.h (conftest.c: 71) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:14185: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | /* end confdefs.h. */ | #include configure:14199: result: no configure:14232: checking for mach/mach_init.h configure:14241: result: no configure:14375: checking sys/param.h usability configure:14392: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:14399: $? = 0 configure:14413: result: yes configure:14417: checking sys/param.h presence configure:14432: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:14439: $? = 0 configure:14453: result: yes configure:14486: checking for sys/param.h configure:14495: result: yes configure:14514: checking for sys/sysctl.h configure:14540: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:14547: $? = 0 configure:14564: result: yes configure:14573: checking whether CTL_HW is declared configure:14608: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0039-Use of undeclared variable CTL_HW (conftest.c: 84) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:14615: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | /* end confdefs.h. */ | | #if HAVE_SYS_PARAM_H | #include | #endif | #include | | | int | main () | { | #ifndef CTL_HW | (void) CTL_HW; | #endif | | ; | return 0; | } configure:14630: result: no configure:14646: checking whether HW_NCPU is declared configure:14681: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0039-Use of undeclared variable HW_NCPU (conftest.c: 85) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:14688: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | /* end confdefs.h. */ | | #if HAVE_SYS_PARAM_H | #include | #endif | #include | | | int | main () | { | #ifndef HW_NCPU | (void) HW_NCPU; | #endif | | ; | return 0; | } configure:14703: result: no configure:14731: checking for sysctl configure:14787: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:14794: $? = 0 configure:14816: result: yes configure:14731: checking for sysctlbyname configure:14787: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `sysctlbyname' configure:14794: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | /* end confdefs.h. */ | /* Define sysctlbyname to an innocuous variant, in case declares sysctlbyname. | For example, HP-UX 11i declares gettimeofday. */ | #define sysctlbyname innocuous_sysctlbyname | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char sysctlbyname (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef sysctlbyname | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char sysctlbyname (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_sysctlbyname || defined __stub___sysctlbyname | choke me | #endif | | int | main () | { | return sysctlbyname (); | ; | return 0; | } configure:14816: result: no configure:14836: checking for pthread_t configure:14865: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:14872: $? = 0 configure:14900: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0040-Illegal use of symbol, pthread_t (conftest.c: 81) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:14907: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | /* end confdefs.h. */ | #include | | int | main () | { | if (sizeof ((pthread_t))) | return 0; | ; | return 0; | } configure:14930: result: yes configure:14959: checking whether function sched_setaffinity is declared configure:14987: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-W-0221-Redefinition of symbol _GNU_SOURCE (conftest.c: 80) PGC-W-0093-Type cast required for this conversion of constant (conftest.c: 87) PGC-S-0141-Wrong number of parameters to function (conftest.c: 87) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:14994: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | /* end confdefs.h. */ | | #define _GNU_SOURCE | #include | | | int | main () | { | sched_setaffinity(1,2,3,4,5,6,7,8,9,10); | ; | return 0; | } configure:15006: result: yes configure:15009: checking for old prototype of sched_setaffinity configure:15037: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-W-0221-Redefinition of symbol _GNU_SOURCE (conftest.c: 81) PGC-W-0095-Type cast required for this conversion (conftest.c: 88) PGC-S-0141-Wrong number of parameters to function (conftest.c: 88) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:15044: $? = 2 configure: failed program was: | | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | /* end confdefs.h. */ | | #define _GNU_SOURCE | #include | static unsigned long mask; | | int | main () | { | sched_setaffinity(0, (void*) &mask); | ; | return 0; | } configure:15060: result: no configure:15072: checking for working CPU_SET configure:15099: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:15106: $? = 0 configure:15119: result: yes configure:15133: checking for working CPU_SET_S configure:15165: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: PGC-W-0095-Type cast required for this conversion (conftest.c: 89) PGC-W-0155-Pointer value created from a nonlong integral type (conftest.c: 89) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with warnings conftest.o: In function `main': conftest.c:(.text+0xc): undefined reference to `CPU_ALLOC' conftest.c:(.text+0x21): undefined reference to `CPU_ALLOC_SIZE' conftest.c:(.text+0x31): undefined reference to `CPU_ZERO_S' conftest.c:(.text+0x3d): undefined reference to `CPU_ALLOC_SIZE' conftest.c:(.text+0x4f): undefined reference to `CPU_SET_S' conftest.c:(.text+0x5d): undefined reference to `CPU_FREE' configure:15172: $? = 2 configure: failed program was: | | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | /* end confdefs.h. */ | | #include | cpu_set_t *set; | | int | main () | { | | set = CPU_ALLOC(1024); | CPU_ZERO_S(CPU_ALLOC_SIZE(1024), set); | CPU_SET_S(CPU_ALLOC_SIZE(1024), 0, set); | CPU_FREE(set); | | ; | return 0; | } configure:15191: result: no configure:15199: checking for working _syscall3 configure:15228: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: PGC-S-0035-Syntax error: Recovery attempted by replacing identifier hwloc_test by typedef id .Z0000 (conftest.c: 85) PGC-S-0035-Syntax error: Recovery attempted by replacing identifier param1 by typedef id .Z0001 (conftest.c: 85) PGC-S-0035-Syntax error: Recovery attempted by replacing identifier param2 by typedef id .Z0002 (conftest.c: 85) PGC-S-0035-Syntax error: Recovery attempted by replacing identifier param3 by typedef id .Z0003 (conftest.c: 85) PGC-W-0156-Type not specified, 'int' assumed (conftest.c: 85) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:15235: $? = 2 configure: failed program was: | | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | /* end confdefs.h. */ | | #include | #include | #define __NR_hwloc_test 123 | _syscall3(int, hwloc_test, int, param1, int, param2, int, param3); | | int | main () | { | hwloc_test(1, 2, 3); | ; | return 0; | } configure:15254: result: no configure:15269: checking for KERRIGHED configure:15277: $HWLOC_PKG_CONFIG --exists --silence-errors "kerrighed >= 2.0" configure:15280: $? = 1 configure:15296: $HWLOC_PKG_CONFIG --exists --silence-errors "kerrighed >= 2.0" configure:15299: $? = 1 No package 'kerrighed' found configure:15329: result: no configure:15463: checking for lib configure:15496: result: no configure:15508: checking for bash configure:15538: result: /bin/sh configure:15551: checking for ffs configure:15607: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:15614: $? = 0 configure:15636: result: yes configure:15646: checking whether function ffs is declared configure:15670: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0141-Wrong number of parameters to function (conftest.c: 117) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:15677: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | ffs(1,2,3,4,5,6,7,8,9,10); | ; | return 0; | } configure:15689: result: yes configure:15716: checking for ffsl configure:15772: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:15779: $? = 0 configure:15801: result: yes configure:15811: checking whether function ffsl is declared configure:15835: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-S-0141-Wrong number of parameters to function (conftest.c: 120) PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with severe errors configure:15842: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | ffsl(1,2,3,4,5,6,7,8,9,10); | ; | return 0; | } configure:15854: result: yes configure:15882: checking for fls configure:15938: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `fls' configure:15945: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | /* end confdefs.h. */ | /* Define fls to an innocuous variant, in case declares fls. | For example, HP-UX 11i declares gettimeofday. */ | #define fls innocuous_fls | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char fls (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef fls | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char fls (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_fls || defined __stub___fls | choke me | #endif | | int | main () | { | return fls (); | ; | return 0; | } configure:15967: result: no configure:16047: checking for flsl configure:16103: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `flsl' configure:16110: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | /* end confdefs.h. */ | /* Define flsl to an innocuous variant, in case declares flsl. | For example, HP-UX 11i declares gettimeofday. */ | #define flsl innocuous_flsl | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char flsl (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef flsl | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char flsl (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_flsl || defined __stub___flsl | choke me | #endif | | int | main () | { | return flsl (); | ; | return 0; | } configure:16132: result: no configure:16213: checking for clz configure:16269: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `clz' configure:16276: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | /* end confdefs.h. */ | /* Define clz to an innocuous variant, in case declares clz. | For example, HP-UX 11i declares gettimeofday. */ | #define clz innocuous_clz | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char clz (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef clz | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char clz (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_clz || defined __stub___clz | choke me | #endif | | int | main () | { | return clz (); | ; | return 0; | } configure:16298: result: no configure:16378: checking for clzl configure:16434: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `clzl' configure:16441: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | /* end confdefs.h. */ | /* Define clzl to an innocuous variant, in case declares clzl. | For example, HP-UX 11i declares gettimeofday. */ | #define clzl innocuous_clzl | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char clzl (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef clzl | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char clzl (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_clzl || defined __stub___clzl | choke me | #endif | | int | main () | { | return clzl (); | ; | return 0; | } configure:16463: result: no configure:16544: checking for openat configure:16600: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:16607: $? = 0 configure:16629: result: yes configure:16658: checking malloc.h usability configure:16675: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:16682: $? = 0 configure:16696: result: yes configure:16700: checking malloc.h presence configure:16715: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:16722: $? = 0 configure:16736: result: yes configure:16769: checking for malloc.h configure:16778: result: yes configure:16799: checking for getpagesize configure:16855: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:16862: $? = 0 configure:16884: result: yes configure:16799: checking for memalign configure:16855: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:16862: $? = 0 configure:16884: result: yes configure:16799: checking for posix_memalign configure:16855: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:16862: $? = 0 configure:16884: result: yes configure:16913: checking sys/utsname.h usability configure:16930: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:16937: $? = 0 configure:16951: result: yes configure:16955: checking sys/utsname.h presence configure:16970: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:16977: $? = 0 configure:16991: result: yes configure:17024: checking for sys/utsname.h configure:17033: result: yes configure:17052: checking for uname configure:17108: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:17115: $? = 0 configure:17137: result: yes configure:17167: checking numaif.h usability configure:17184: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file numaif.h (conftest.c: 126) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:17191: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:17205: result: no configure:17209: checking numaif.h presence configure:17224: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file numaif.h (conftest.c: 93) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:17231: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | /* end confdefs.h. */ | #include configure:17245: result: no configure:17278: checking for numaif.h configure:17287: result: no configure:17554: checking pthread_np.h usability configure:17571: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file pthread_np.h (conftest.c: 126) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:17578: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:17592: result: no configure:17596: checking pthread_np.h presence configure:17611: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c PGC-F-0206-Can't find include file pthread_np.h (conftest.c: 93) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:17618: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | /* end confdefs.h. */ | #include configure:17632: result: no configure:17665: checking for pthread_np.h configure:17674: result: no configure:17689: checking whether pthread_setaffinity_np is declared configure:17724: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:17731: $? = 0 configure:17746: result: yes configure:17764: checking whether pthread_getaffinity_np is declared configure:17799: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 configure:17806: $? = 0 configure:17821: result: yes configure:17839: checking for sched_setaffinity configure:17895: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:17902: $? = 0 configure:17922: result: yes configure:17932: checking for sys/cpuset.h configure:17953: pgcc -c -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 PGC-F-0206-Can't find include file sys/cpuset.h (conftest.c: 97) PGC/x86-64 Linux/x86-64 6.2-5: compilation aborted configure:17960: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | #define HAVE_DECL_PTHREAD_SETAFFINITY_NP 1 | #define HAVE_DECL_PTHREAD_GETAFFINITY_NP 1 | /* end confdefs.h. */ | #include | | #include configure:17977: result: no configure:17990: checking for library containing pthread_getthrds_np configure:18031: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `pthread_getthrds_np' configure:18038: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | #define HAVE_DECL_PTHREAD_SETAFFINITY_NP 1 | #define HAVE_DECL_PTHREAD_GETAFFINITY_NP 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pthread_getthrds_np (); | int | main () | { | return pthread_getthrds_np (); | ; | return 0; | } configure:18031: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lpthread -lrt -lpthread >&5 conftest.c: conftest.o: In function `main': conftest.c:(.text+0x7): undefined reference to `pthread_getthrds_np' configure:18038: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "hwloc" | #define PACKAGE_TARNAME "hwloc" | #define PACKAGE_VERSION "1.1.1rc4" | #define PACKAGE_STRING "hwloc 1.1.1rc4" | #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" | #define PACKAGE "hwloc" | #define VERSION "1.1.1rc4" | #define HWLOC_MAJOR_VERSION 1 | #define HWLOC_MINOR_VERSION 1 | #define HWLOC_RELEASE_VERSION 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HWLOC_SYM_PREFIX hwloc_ | #define HWLOC_SYM_PREFIX_CAPS HWLOC_ | #define HWLOC_SYM_TRANSFORM 0 | #define __EXTENSIONS__ 1 | #define _ALL_SOURCE 1 | #define _GNU_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define _TANDEM_SOURCE 1 | #define _HPUX_SOURCE 1 | #define SIZEOF_VOID_P 8 | #define HWLOC_LINUX_SYS 1 | #define HWLOC_X86_64_ARCH 1 | #define SIZEOF_UNSIGNED_LONG 8 | #define HWLOC_SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define HWLOC_SIZEOF_UNSIGNED_INT 4 | #define HWLOC_HAVE_ATTRIBUTE 1 | #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 | #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 | #define HWLOC_HAVE_ATTRIBUTE_COLD 1 | #define HWLOC_HAVE_ATTRIBUTE_CONST 1 | #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 | #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 | #define HWLOC_HAVE_ATTRIBUTE_HOT 1 | #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 | #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 | #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 | #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 | #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 | #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 | #define HWLOC_HAVE_ATTRIBUTE_PURE 1 | #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 | #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 | #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 | #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 | #define HWLOC_C_HAVE_VISIBILITY 1 | #define __hwloc_inline __inline__ | #define HAVE_STRNCASECMP 1 | #define hwloc_strncasecmp strncasecmp | #define HAVE_STRFTIME 1 | #define HAVE_SETLOCALE 1 | #define HWLOC_HAVE_STDINT_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 | #define HAVE_DECL__SC_NPROCESSORS_CONF 1 | #define HAVE_DECL__SC_NPROC_ONLN 0 | #define HAVE_DECL__SC_NPROC_CONF 0 | #define HAVE_DECL__SC_LARGE_PAGESIZE 0 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SYSCTL_H 1 | #define HAVE_DECL_CTL_HW 0 | #define HAVE_DECL_HW_NCPU 0 | #define HAVE_SYSCTL 1 | #define HAVE_PTHREAD_T 1 | #define hwloc_pid_t pid_t | #define hwloc_thread_t pthread_t | #define HWLOC_HAVE_CPU_SET 1 | #define HAVE_FFS 1 | #define HWLOC_HAVE_DECL_FFS 1 | #define HWLOC_HAVE_FFS 1 | #define HAVE_FFSL 1 | #define HWLOC_HAVE_DECL_FFSL 1 | #define HWLOC_HAVE_FFSL 1 | #define HAVE_OPENAT 1 | #define HAVE_MALLOC_H 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MEMALIGN 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNAME 1 | #define HAVE_DECL_PTHREAD_SETAFFINITY_NP 1 | #define HAVE_DECL_PTHREAD_GETAFFINITY_NP 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pthread_getthrds_np (); | int | main () | { | return pthread_getthrds_np (); | ; | return 0; | } configure:18069: result: no configure:18088: checking for XML configure:18096: $HWLOC_PKG_CONFIG --exists --silence-errors "libxml-2.0" configure:18099: $? = 0 configure:18115: $HWLOC_PKG_CONFIG --exists --silence-errors "libxml-2.0" configure:18118: $? = 0 configure:18154: result: yes configure:18168: checking for xmlNewDoc configure:18224: pgcc -o conftest -O2 -I/usr/include/libxml2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread -lxml2 -lz -lm >&5 conftest.c: configure:18231: $? = 0 configure:18251: result: yes configure:18262: checking for final XML support configure:18267: result: yes configure:18316: checking for cpuid configure:18351: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lrt -lpthread >&5 conftest.c: configure:18358: $? = 0 configure:18366: result: yes configure:18407: checking for X configure:18522: pgcc -E -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c configure:18529: $? = 0 configure:18578: pgcc -o conftest -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c -lX11 -lrt -lpthread >&5 conftest.c: configure:18585: $? = 0 configure:18647: result: libraries , headers configure:23928: checking for a sed that does not truncate output configure:23994: result: /bin/sed configure:24012: checking for fgrep configure:24076: result: /bin/grep -F configure:24144: checking for non-GNU ld configure:24178: result: /usr/bin/ld configure:24187: checking if the linker (/usr/bin/ld) is GNU ld configure:24202: result: yes configure:24214: checking for BSD- or MS-compatible name lister (nm) configure:24263: result: /usr/bin/nm -B configure:24381: checking the name lister (/usr/bin/nm -B) interface configure:24388: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:24391: /usr/bin/nm -B "conftest.o" configure:24394: output 0000000000000000 D some_variable configure:24401: result: BSD nm configure:24404: checking whether ln -s works configure:24408: result: yes configure:24416: checking the maximum length of command line arguments configure:24536: result: 98304 configure:24553: checking whether the shell understands some XSI constructs configure:24563: result: yes configure:24567: checking whether the shell understands "+=" configure:24573: result: yes configure:24608: checking for /usr/bin/ld option to reload object files configure:24615: result: -r configure:24684: checking for objdump configure:24700: found /usr/bin/objdump configure:24711: result: objdump configure:24740: checking how to recognize dependent libraries configure:24936: result: pass_all configure:24996: checking for ar configure:25023: result: ar configure:25101: checking for strip configure:25117: found /usr/bin/strip configure:25128: result: strip configure:25200: checking for ranlib configure:25227: result: ranlib configure:25317: checking command to parse /usr/bin/nm -B output from pgcc object configure:25435: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:25438: $? = 0 configure:25442: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm configure:25445: $? = 0 configure:25499: pgcc -o conftest -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl conftest.c conftstm.o >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden conftest.c: configure:25502: $? = 0 configure:25540: result: ok configure:25635: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:25638: $? = 0 configure:26405: checking for dlfcn.h configure:26426: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:26433: $? = 0 configure:26450: result: yes configure:26874: checking for objdir configure:26889: result: .libs configure:27240: checking for pgcc option to produce PIC configure:27512: result: -fpic -DPIC configure:27524: checking if pgcc PIC flag -fpic -DPIC works configure:27542: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -fpic -DPIC -DPIC conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:27546: $? = 0 configure:27559: result: yes configure:27583: checking if pgcc static flag -Bstatic works pgcc-Warning-Unknown switch: -fvisibility=hidden conftest.c: configure:27611: result: yes configure:27626: checking if pgcc supports -c -o file.o configure:27647: pgcc -c -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -o out/conftest2.o conftest.c >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden configure:27651: $? = 0 configure:27673: result: yes configure:27681: checking if pgcc supports -c -o file.o configure:27728: result: yes configure:27761: checking whether the pgcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:28835: result: yes configure:29074: checking dynamic linker characteristics configure:29517: pgcc -o conftest -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include -I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -lnsl -Wl,-rpath -Wl,/foo conftest.c -lrt -lpthread >&5 pgcc-Warning-Unknown switch: -fvisibility=hidden conftest.c: configure:29524: $? = 0 configure:29757: result: GNU/Linux ld.so configure:29859: checking how to hardcode library paths into programs configure:29884: result: immediate configure:30717: checking whether stripping libraries is possible configure:30722: result: yes configure:30757: checking if libtool supports shared libraries configure:30759: result: yes configure:30762: checking whether to build shared libraries configure:30783: result: yes configure:30786: checking whether to build static libraries configure:30790: result: no configure:31190: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by hwloc config.status 1.1.1rc4, which was generated by GNU Autoconf 2.63. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on neem config.status:1226: creating Makefile config.status:1226: creating include/Makefile config.status:1226: creating src/Makefile config.status:1226: creating include/private/config.h config.status:1448: include/private/config.h is unchanged config.status:1226: creating include/hwloc/config.h config.status:1448: include/hwloc/config.h is unchanged config.status:1535: executing depfiles commands config.status:1535: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## HWLOC_pkg_cv_HWLOC_XML_CFLAGS='-I/usr/include/libxml2 ' HWLOC_pkg_cv_HWLOC_XML_LIBS='-lxml2 -lz -lm ' ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=no ac_cv_env_CC_set=set ac_cv_env_CC_value=pgcc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=' -O2 ' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value=' -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_DOXYGEN_set= ac_cv_env_DOXYGEN_value= ac_cv_env_EPSTOPDF_set= ac_cv_env_EPSTOPDF_value= ac_cv_env_FIG2DEV_set= ac_cv_env_FIG2DEV_value= ac_cv_env_GS_set= ac_cv_env_GS_value= ac_cv_env_HWLOC_CAIRO_CFLAGS_set= ac_cv_env_HWLOC_CAIRO_CFLAGS_value= ac_cv_env_HWLOC_CAIRO_LIBS_set= ac_cv_env_HWLOC_CAIRO_LIBS_value= ac_cv_env_HWLOC_KERRIGHED_CFLAGS_set= ac_cv_env_HWLOC_KERRIGHED_CFLAGS_value= ac_cv_env_HWLOC_KERRIGHED_LIBS_set= ac_cv_env_HWLOC_KERRIGHED_LIBS_value= ac_cv_env_HWLOC_MS_LIB_set= ac_cv_env_HWLOC_MS_LIB_value= ac_cv_env_HWLOC_PKG_CONFIG_set= ac_cv_env_HWLOC_PKG_CONFIG_value= ac_cv_env_HWLOC_XML_CFLAGS_set= ac_cv_env_HWLOC_XML_CFLAGS_value= ac_cv_env_HWLOC_XML_LIBS_set= ac_cv_env_HWLOC_XML_LIBS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value=' -lnsl' ac_cv_env_LIBS_set=set ac_cv_env_LIBS_value='-lrt -lpthread ' ac_cv_env_LYNX_set= ac_cv_env_LYNX_value= ac_cv_env_MAKEINDEX_set= ac_cv_env_MAKEINDEX_value= ac_cv_env_PDFLATEX_set= ac_cv_env_PDFLATEX_value= ac_cv_env_W3M_set= ac_cv_env_W3M_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_clz=no ac_cv_func_clzl=no ac_cv_func_ffs=yes ac_cv_func_ffsl=yes ac_cv_func_fls=no ac_cv_func_flsl=no ac_cv_func_getpagesize=yes ac_cv_func_memalign=yes ac_cv_func_openat=yes ac_cv_func_posix_memalign=yes ac_cv_func_sched_setaffinity=yes ac_cv_func_setlocale=yes ac_cv_func_strftime=yes ac_cv_func_strncasecmp=yes ac_cv_func_sysctl=yes ac_cv_func_sysctlbyname=no ac_cv_func_uname=yes ac_cv_func_xmlNewDoc=yes ac_cv_have_decl_CTL_HW=no ac_cv_have_decl_HW_NCPU=no ac_cv_have_decl__SC_LARGE_PAGESIZE=no ac_cv_have_decl__SC_NPROCESSORS_CONF=yes ac_cv_have_decl__SC_NPROCESSORS_ONLN=yes ac_cv_have_decl__SC_NPROC_CONF=no ac_cv_have_decl__SC_NPROC_ONLN=no ac_cv_have_decl_pthread_getaffinity_np=yes ac_cv_have_decl_pthread_setaffinity_np=yes ac_cv_have_x='have_x=yes ac_x_includes='\'''\'' ac_x_libraries='\'''\''' ac_cv_header_dlfcn_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_kstat_h=no ac_cv_header_mach_mach_host_h=no ac_cv_header_mach_mach_init_h=no ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_minix_config_h=no ac_cv_header_numaif_h=no ac_cv_header_pthread_np_h=no ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_cpuset_h=no ac_cv_header_sys_lgrp_user_h=no ac_cv_header_sys_mman_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_sysctl_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_utsname_h=yes ac_cv_header_unistd_h=yes ac_cv_header_windows_h=no ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_gdi32_main=no ac_cv_objext=o ac_cv_path_BASH=/bin/sh ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_SED=/bin/sed ac_cv_path_ac_pt_HWLOC_PKG_CONFIG=/usr/bin/pkg-config ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_AWK=gawk ac_cv_prog_CPP='pgcc -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=pgcc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_c99= ac_cv_prog_cc_g=yes ac_cv_prog_cc_pgcc_c_o=yes ac_cv_prog_make_make_set=yes ac_cv_safe_to_define___extensions__=yes ac_cv_search_pthread_getthrds_np=no ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long=8 ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_type_CACHE_DESCRIPTOR=no ac_cv_type_CACHE_RELATIONSHIP=no ac_cv_type_GROUP_AFFINITY=no ac_cv_type_GROUP_RELATIONSHIP=no ac_cv_type_KAFFINITY=no ac_cv_type_LOGICAL_PROCESSOR_RELATIONSHIP=no ac_cv_type_NUMA_NODE_RELATIONSHIP=no ac_cv_type_PROCESSOR_CACHE_TYPE=no ac_cv_type_PROCESSOR_GROUP_INFO=no ac_cv_type_PROCESSOR_RELATIONSHIP=no ac_cv_type_PSAPI_WORKING_SET_EX_BLOCK=no ac_cv_type_PSAPI_WORKING_SET_EX_INFORMATION=no ac_cv_type_RelationProcessorPackage=no ac_cv_type_SYSTEM_LOGICAL_PROCESSOR_INFORMATION=no ac_cv_type_SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX=no ac_cv_type_pthread_t=yes am_cv_CC_dependencies_compiler_type=none am_cv_prog_tar_ustar=gnutar hwloc_cv___attribute__=1 hwloc_cv___attribute__aligned=1 hwloc_cv___attribute__always_inline=1 hwloc_cv___attribute__cold=1 hwloc_cv___attribute__const=1 hwloc_cv___attribute__deprecated=1 hwloc_cv___attribute__format=0 hwloc_cv___attribute__hot=1 hwloc_cv___attribute__malloc=1 hwloc_cv___attribute__may_alias=1 hwloc_cv___attribute__no_instrument_function=1 hwloc_cv___attribute__nonnull=0 hwloc_cv___attribute__noreturn=1 hwloc_cv___attribute__packed=1 hwloc_cv___attribute__pure=1 hwloc_cv___attribute__sentinel=0 hwloc_cv___attribute__unused=1 hwloc_cv___attribute__warn_unused_result=0 hwloc_cv___attribute__weak_alias=1 hwloc_cv_cc_fvisibility=yes lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_static_works=yes lt_cv_prog_gnu_ld=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=98304 ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run tar' AM_BACKSLASH='\' AM_DEFAULT_VERBOSITY='0' AR='ar' AS='as' AUTOCONF='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run autoconf' AUTOHEADER='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run autoheader' AUTOMAKE='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run automake-1.11' AWK='gawk' BASH='/bin/sh' BUNZIPP='' CC='pgcc' CCDEPMODE='depmode=none' CFLAGS=' -fvisibility=hidden -I/usr/include/libxml2 -O2 -I/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/include' CONFIGURE_DEPENDENCIES='$(top_srcdir)/VERSION' CPP='pgcc -E' CPPFLAGS='-I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpl/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/openpa/src -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/datatype -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/common/locks -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/include -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/mpid/ch3/channels/nemesis/nemesis/utils/monitor -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers -I/neem2/huangwei/src/mpich2-1.3.2p1/src/util/wrappers' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='dlltool' DOXYGEN='' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EPSTOPDF='' EXEEXT='' FGREP='/bin/grep -F' FIG2DEV='' GREP='/bin/grep' GS='' HWLOC_BUILD_DOXYGEN_FALSE='' HWLOC_BUILD_DOXYGEN_TRUE='#' HWLOC_BUILD_README_FALSE='' HWLOC_BUILD_README_TRUE='#' HWLOC_BUILD_STANDALONE_FALSE='' HWLOC_BUILD_STANDALONE_TRUE='#' HWLOC_BUILD_TESTS_FALSE='' HWLOC_BUILD_TESTS_TRUE='#' HWLOC_BUILD_UTILS_FALSE='' HWLOC_BUILD_UTILS_TRUE='#' HWLOC_CAIRO_CFLAGS='' HWLOC_CAIRO_LIBS='' HWLOC_CFLAGS=' -fvisibility=hidden -I/usr/include/libxml2 ' HWLOC_CPPFLAGS='-I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include' HWLOC_DIFF_U='' HWLOC_DOXYGEN_BROKEN_SHORT_NAMES_FALSE='' HWLOC_DOXYGEN_BROKEN_SHORT_NAMES_TRUE='#' HWLOC_EMBEDDED_CFLAGS=' -fvisibility=hidden -I/usr/include/libxml2 ' HWLOC_EMBEDDED_CPPFLAGS='-I$(HWLOC_top_srcdir)/include -I$(HWLOC_top_builddir)/include' HWLOC_EMBEDDED_LDADD='$(HWLOC_top_builddir)/src/libhwloc_embedded.la' HWLOC_EMBEDDED_LIBS='' HWLOC_HAVE_AIX_FALSE='' HWLOC_HAVE_AIX_TRUE='#' HWLOC_HAVE_BUNZIPP_FALSE='#' HWLOC_HAVE_BUNZIPP_TRUE='' HWLOC_HAVE_CAIRO_FALSE='#' HWLOC_HAVE_CAIRO_TRUE='' HWLOC_HAVE_CPUID_FALSE='#' HWLOC_HAVE_CPUID_TRUE='' HWLOC_HAVE_CUDART_FALSE='' HWLOC_HAVE_CUDART_TRUE='#' HWLOC_HAVE_CUDA_FALSE='' HWLOC_HAVE_CUDA_TRUE='#' HWLOC_HAVE_DARWIN_FALSE='' HWLOC_HAVE_DARWIN_TRUE='#' HWLOC_HAVE_FREEBSD_FALSE='' HWLOC_HAVE_FREEBSD_TRUE='#' HWLOC_HAVE_GCC_FALSE='' HWLOC_HAVE_GCC_TRUE='#' HWLOC_HAVE_HPUX_FALSE='' HWLOC_HAVE_HPUX_TRUE='#' HWLOC_HAVE_IRIX_FALSE='' HWLOC_HAVE_IRIX_TRUE='#' HWLOC_HAVE_LIBIBVERBS_FALSE='' HWLOC_HAVE_LIBIBVERBS_TRUE='#' HWLOC_HAVE_LINUX_FALSE='#' HWLOC_HAVE_LINUX_LIBNUMA_FALSE='' HWLOC_HAVE_LINUX_LIBNUMA_TRUE='#' HWLOC_HAVE_LINUX_TRUE='' HWLOC_HAVE_MBIND_FALSE='#' HWLOC_HAVE_MBIND_TRUE='' HWLOC_HAVE_MINGW32_FALSE='' HWLOC_HAVE_MINGW32_TRUE='#' HWLOC_HAVE_MS_LIB_FALSE='' HWLOC_HAVE_MS_LIB_TRUE='#' HWLOC_HAVE_MYRIEXPRESS_FALSE='' HWLOC_HAVE_MYRIEXPRESS_TRUE='#' HWLOC_HAVE_OPENAT_FALSE='#' HWLOC_HAVE_OPENAT_TRUE='' HWLOC_HAVE_OSF_FALSE='' HWLOC_HAVE_OSF_TRUE='#' HWLOC_HAVE_SCHED_SETAFFINITY_FALSE='#' HWLOC_HAVE_SCHED_SETAFFINITY_TRUE='' HWLOC_HAVE_SET_MEMPOLICY_FALSE='#' HWLOC_HAVE_SET_MEMPOLICY_TRUE='' HWLOC_HAVE_SOLARIS_FALSE='' HWLOC_HAVE_SOLARIS_TRUE='#' HWLOC_HAVE_WINDOWS_FALSE='' HWLOC_HAVE_WINDOWS_TRUE='#' HWLOC_HAVE_X86_32_FALSE='' HWLOC_HAVE_X86_32_TRUE='#' HWLOC_HAVE_X86_64_FALSE='#' HWLOC_HAVE_X86_64_TRUE='' HWLOC_HAVE_XML='1' HWLOC_HAVE_XML_FALSE='#' HWLOC_HAVE_XML_TRUE='' HWLOC_INSTALL_DOXYGEN_FALSE='' HWLOC_INSTALL_DOXYGEN_TRUE='#' HWLOC_KERRIGHED_CFLAGS='' HWLOC_KERRIGHED_LIBS='' HWLOC_LDFLAGS='-L$(HWLOC_top_builddir)/src' HWLOC_LIBS='' HWLOC_LINUX_LIBNUMA_LIBS='' HWLOC_MS_LIB='' HWLOC_PKG_CONFIG='/usr/bin/pkg-config' HWLOC_RELEASE_DATE='Unreleased developer copy' HWLOC_REQUIRES='libxml-2.0 ' HWLOC_SVN_R='-1' HWLOC_TERMCAP_LIBS='' HWLOC_VERSION='1.1.1rc4-1' HWLOC_W3_GENERATOR='' HWLOC_X11_LIBS='' HWLOC_XML_CFLAGS='-I/usr/include/libxml2 ' HWLOC_XML_LIBS='-lxml2 -lz -lm ' HWLOC_top_builddir='/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc' HWLOC_top_srcdir='/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS=' -lnsl' LIBOBJS='' LIBS=' -lrt -lpthread ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LYNX='' MAKEINDEX='' MAKEINFO='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/missing --run makeinfo' MKDIR_P='mkdir -p' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='hwloc' PACKAGE_BUGREPORT='http://www.open-mpi.org/community/help/' PACKAGE_NAME='hwloc' PACKAGE_STRING='hwloc 1.1.1rc4-1' PACKAGE_TARNAME='hwloc' PACKAGE_VERSION='1.1.1rc4-1' PATH_SEPARATOR=':' PDFLATEX='' RANLIB='ranlib' SED='/bin/sed' SED_I='' SET_MAKE='' SHELL='/bin/sh' STRIP='strip' VERSION='1.1.1rc4-1' W3M='' XMKMF='' XMLLINT='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ac_ct_CC='pgcc' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__quote='' am__tar='tar --format=ustar -chf - "$$tardir"' am__untar='tar -xf -' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' libhwloc_so_version='2:0:2' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' lt_ECHO='echo' mandir='${datarootdir}/man' mkdir_p='mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/neem2/huangwei/apps/mpich2-1.3.2p1' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_NAME "hwloc" #define PACKAGE_TARNAME "hwloc" #define PACKAGE_VERSION "1.1.1rc4" #define PACKAGE_STRING "hwloc 1.1.1rc4" #define PACKAGE_BUGREPORT "http://www.open-mpi.org/community/help/" #define PACKAGE "hwloc" #define VERSION "1.1.1rc4" #define HWLOC_MAJOR_VERSION 1 #define HWLOC_MINOR_VERSION 1 #define HWLOC_RELEASE_VERSION 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HWLOC_SYM_PREFIX hwloc_ #define HWLOC_SYM_PREFIX_CAPS HWLOC_ #define HWLOC_SYM_TRANSFORM 0 #define __EXTENSIONS__ 1 #define _ALL_SOURCE 1 #define _GNU_SOURCE 1 #define _POSIX_PTHREAD_SEMANTICS 1 #define _TANDEM_SOURCE 1 #define _HPUX_SOURCE 1 #define SIZEOF_VOID_P 8 #define HWLOC_LINUX_SYS 1 #define HWLOC_X86_64_ARCH 1 #define SIZEOF_UNSIGNED_LONG 8 #define HWLOC_SIZEOF_UNSIGNED_LONG 8 #define SIZEOF_UNSIGNED_INT 4 #define HWLOC_SIZEOF_UNSIGNED_INT 4 #define HWLOC_HAVE_ATTRIBUTE 1 #define HWLOC_HAVE_ATTRIBUTE_ALIGNED 1 #define HWLOC_HAVE_ATTRIBUTE_ALWAYS_INLINE 1 #define HWLOC_HAVE_ATTRIBUTE_COLD 1 #define HWLOC_HAVE_ATTRIBUTE_CONST 1 #define HWLOC_HAVE_ATTRIBUTE_DEPRECATED 1 #define HWLOC_HAVE_ATTRIBUTE_FORMAT 0 #define HWLOC_HAVE_ATTRIBUTE_HOT 1 #define HWLOC_HAVE_ATTRIBUTE_MALLOC 1 #define HWLOC_HAVE_ATTRIBUTE_MAY_ALIAS 1 #define HWLOC_HAVE_ATTRIBUTE_NO_INSTRUMENT_FUNCTION 1 #define HWLOC_HAVE_ATTRIBUTE_NONNULL 0 #define HWLOC_HAVE_ATTRIBUTE_NORETURN 1 #define HWLOC_HAVE_ATTRIBUTE_PACKED 1 #define HWLOC_HAVE_ATTRIBUTE_PURE 1 #define HWLOC_HAVE_ATTRIBUTE_SENTINEL 0 #define HWLOC_HAVE_ATTRIBUTE_UNUSED 1 #define HWLOC_HAVE_ATTRIBUTE_WARN_UNUSED_RESULT 0 #define HWLOC_HAVE_ATTRIBUTE_WEAK_ALIAS 1 #define HWLOC_C_HAVE_VISIBILITY 1 #define __hwloc_inline __inline__ #define HAVE_STRNCASECMP 1 #define hwloc_strncasecmp strncasecmp #define HAVE_STRFTIME 1 #define HAVE_SETLOCALE 1 #define HWLOC_HAVE_STDINT_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_DECL__SC_NPROCESSORS_ONLN 1 #define HAVE_DECL__SC_NPROCESSORS_CONF 1 #define HAVE_DECL__SC_NPROC_ONLN 0 #define HAVE_DECL__SC_NPROC_CONF 0 #define HAVE_DECL__SC_LARGE_PAGESIZE 0 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SYSCTL_H 1 #define HAVE_DECL_CTL_HW 0 #define HAVE_DECL_HW_NCPU 0 #define HAVE_SYSCTL 1 #define HAVE_PTHREAD_T 1 #define hwloc_pid_t pid_t #define hwloc_thread_t pthread_t #define HWLOC_HAVE_CPU_SET 1 #define HAVE_FFS 1 #define HWLOC_HAVE_DECL_FFS 1 #define HWLOC_HAVE_FFS 1 #define HAVE_FFSL 1 #define HWLOC_HAVE_DECL_FFSL 1 #define HWLOC_HAVE_FFSL 1 #define HAVE_OPENAT 1 #define HAVE_MALLOC_H 1 #define HAVE_GETPAGESIZE 1 #define HAVE_MEMALIGN 1 #define HAVE_POSIX_MEMALIGN 1 #define HAVE_SYS_UTSNAME_H 1 #define HAVE_UNAME 1 #define HAVE_DECL_PTHREAD_SETAFFINITY_NP 1 #define HAVE_DECL_PTHREAD_GETAFFINITY_NP 1 #define HWLOC_HAVE_XML 1 #define HWLOC_HAVE_CPUID 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" configure: exit 0