Wed Feb 2 17:59:56 CET 2011 /usr/workdir/cesm1_0_2/scripts/test1/pio/pio.bldlog.110202-175938 Copying source to CCSM EXEROOT... ignore pio file alloc_mod.F90 ignore pio file box_rearrange.F90 cp: omitting directory `configure.old' ignore pio file iompi_mod.F90 ignore pio file mct_rearrange.F90 ignore pio file pio_spmd_utils.F90 ignore pio file pio_support.F90 ignore pio file piodarray.F90 ignore pio file pionfatt_mod.F90 ignore pio file pionfget_mod.F90 ignore pio file pionfput_mod.F90 ignore pio file pionfread_mod.F90 ignore pio file pionfwrite_mod.F90 ignore pio file rearrange.F90 New build of PIO Running configure... for OS=Linux MACH=Latitude_E6400 cat: Filepath: No such file or directory cat: Srcfiles: No such file or directory /usr/workdir/cesm1_0_2/scripts/test1/Tools/mkSrcfiles > /usr/workdir/cesm1_0_2/scripts/test1/pio/Srcfiles cp -f /usr/workdir/cesm1_0_2/scripts/test1/pio/Filepath /usr/workdir/cesm1_0_2/scripts/test1/pio/Deppath /usr/workdir/cesm1_0_2/scripts/test1/Tools/mkDepends Deppath Srcfiles > /usr/workdir/cesm1_0_2/scripts/test1/pio/Depends ./configure --disable-mct --disable-timing CC="mpicc" FC="mpif90" F90="mpif90" NETCDF_PATH="/usr/local/netcdf-4.1.1" FFLAGS="-ffree-line-length-none" MPI_INC="/usr/local/mpich2-1.3.1/include" checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes checking how to run the C preprocessor... mpicc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for char... yes checking size of char... 1 checking for int... yes checking size of int... 4 checking for float... yes checking size of float... 4 checking for double... yes checking size of double... 8 checking for void *... yes checking size of void *... 4 checking Fortran 90 filename extension... .F90 checking whether we are using the GNU Fortran 90 compiler... yes checking for mpxlf90_r... no checking for mpxlf90... no checking for mpxlf95... no checking for mpif90... mpif90 checking for mpif.h... yes checking MPI-IO support in MPI implementation... yes checking how to get the version output from mpif90... --version checking whether byte ordering is bigendian... no configure: WARNING: UNKNOWN FORTRAN 90 COMPILER checking whether fortran .mod file is uppercase... no checking for Fortran 90 name-mangling scheme... lower case, underscore checking for cpp... cpp checking if Fortran 90 compiler performs preprocessing... yes checking if C preprocessor can work with Fortran compiler... yes Full hostname= MaffieLE6400 Hostname=MaffieLE6400 Machine=i686 OS=Linux using NETCDF_PATH from environment configure: WARNING: PNETCDF_PATH not found in environment, defaulting to /usr/local/pnetcdf configure: WARNING: pnetcdf.inc not found in PNETCDF_PATH/include disabling pnetcdf support configure: WARNING: libpnetcdf.a not found in PNETCDF_PATH/lib disabling pnetcdf support checking Fortran 90 support for sizeof()... no disabling Fortran sizeof() Temp variables: {F90=mpif90} {MPIF90=mpif90} Output Variables: {CC=mpicc} {MPICC=mpicc} {ALLCFLAGS=-g -O2 -DFORTRAN_UNDERSCORE_ -DFORTRANUNDERSCORE -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR} {EXPLICIT_FPP=no} {FPP=cpp} {FPPFLAGS=-P -C -N -traditional} {FC=mpif90} {MPIF90=mpif90}{OPT=} {BIT64=} {REAL8=} {ENDIAN=} {FFLAGS=-ffree-line-length-none /usr/local/mpich2-1.3.1/include} {CFLAGS=-g -O2} {F90FLAGS=} {MACHDEFS=-DSYSLINUX -DLINUX -DCPRUNKNOWNCPR} {MPI_INC=/usr/local/mpich2-1.3.1/include} {MPI_LIB=} {MODINC=-I} {INCLUDEPATH=} {AR=ar} {ARFLAGS=cq} {USE_PNETCDF=no} {PNETCDF_PATH=/usr/local/pnetcdf} {USE_NETCDF=yes} {NETCDF_PATH=/usr/local/netcdf-4.1.1} {USE_MCT=no} {USEBOX=yes} {PDEFS= -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF} {PDEFSF= -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF} {PINCS=/usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include} {LDLIBS= -L/usr/local/netcdf-4.1.1/lib -lnetcdf } {DEBUG=no} configure: creating ./config.status config.status: creating Makefile.conf Please check the Makefile.conf Have a nice day! Making dependencies for pio.F90 --> pio.d Making dependencies for pio_kinds.F90 --> pio_kinds.d Making dependencies for nf_mod.F90 --> nf_mod.d Making dependencies for ionf_mod.F90 --> ionf_mod.d Making dependencies for pio_types.F90 --> pio_types.d Making dependencies for piolib_mod.F90 --> piolib_mod.d Making dependencies for pio_mpi_utils.F90 --> pio_mpi_utils.d Making dependencies for pio_nf_utils.F90 --> pio_nf_utils.d Making dependencies for pio_utils.F90 --> pio_utils.d Making dependencies for pio_quicksort.F90 --> pio_quicksort.d /usr/bin/perl genf90.pl pionfatt_mod.F90.in > pionfatt_mod.F90 Making dependencies for pionfatt_mod.F90 --> pionfatt_mod.d /usr/bin/perl genf90.pl pionfread_mod.F90.in > pionfread_mod.F90 Making dependencies for pionfread_mod.F90 --> pionfread_mod.d /usr/bin/perl genf90.pl pionfwrite_mod.F90.in > pionfwrite_mod.F90 Making dependencies for pionfwrite_mod.F90 --> pionfwrite_mod.d /usr/bin/perl genf90.pl pionfput_mod.F90.in > pionfput_mod.F90 Making dependencies for pionfput_mod.F90 --> pionfput_mod.d /usr/bin/perl genf90.pl pionfget_mod.F90.in > pionfget_mod.F90 Making dependencies for pionfget_mod.F90 --> pionfget_mod.d /usr/bin/perl genf90.pl alloc_mod.F90.in > alloc_mod.F90 Making dependencies for alloc_mod.F90 --> alloc_mod.d /usr/bin/perl genf90.pl box_rearrange.F90.in > box_rearrange.F90 Making dependencies for box_rearrange.F90 --> box_rearrange.d /usr/bin/perl genf90.pl rearrange.F90.in > rearrange.F90 Making dependencies for rearrange.F90 --> rearrange.d /usr/bin/perl genf90.pl pio_support.F90.in > pio_support.F90 Making dependencies for pio_support.F90 --> pio_support.d /usr/bin/perl genf90.pl mct_rearrange.F90.in > mct_rearrange.F90 Making dependencies for mct_rearrange.F90 --> mct_rearrange.d /usr/bin/perl genf90.pl iompi_mod.F90.in > iompi_mod.F90 Making dependencies for iompi_mod.F90 --> iompi_mod.d /usr/bin/perl genf90.pl piodarray.F90.in > piodarray.F90 Making dependencies for piodarray.F90 --> piodarray.d /usr/bin/perl genf90.pl pio_spmd_utils.F90.in > pio_spmd_utils.F90 Making dependencies for pio_spmd_utils.F90 --> pio_spmd_utils.d Done updating dependencies gmake[1]: Entering directory `/usr/workdir/cesm1_0_2/scripts/test1/pio' mpicc -c -g -O2 -DFORTRAN_UNDERSCORE_ -DFORTRANUNDERSCORE -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include topology.c gcc: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpicc -c -g -O2 -DFORTRAN_UNDERSCORE_ -DFORTRANUNDERSCORE -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pnetcdfversion.c gcc: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_kinds.F90 mpif.h:503.11: Included at pio_kinds.F90:23: SAVE /MPIFCMB1/,/MPIFCMB2/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:504.11: Included at pio_kinds.F90:23: SAVE /MPIFCMB3/,/MPIFCMB4/,/MPIFCMB5/,/MPIFCMB6/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:505.11: Included at pio_kinds.F90:23: SAVE /MPIFCMB7/,/MPIFCMB8/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_types.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_support.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include alloc_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_utils.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include ionf_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pionfread_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include nf_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pionfwrite_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_mpi_utils.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include iompi_mod.F90 mpif.h:503.11: Included at iompi_mod.F90.in:24: SAVE /MPIFCMB1/,/MPIFCMB2/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:504.11: Included at iompi_mod.F90.in:24: SAVE /MPIFCMB3/,/MPIFCMB4/,/MPIFCMB5/,/MPIFCMB6/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:505.11: Included at iompi_mod.F90.in:24: SAVE /MPIFCMB7/,/MPIFCMB8/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_quicksort.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include mct_rearrange.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_spmd_utils.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include box_rearrange.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include rearrange.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include piolib_mod.F90 mpif.h:503.11: Included at piolib_mod.F90:35: SAVE /MPIFCMB1/,/MPIFCMB2/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:504.11: Included at piolib_mod.F90:35: SAVE /MPIFCMB3/,/MPIFCMB4/,/MPIFCMB5/,/MPIFCMB6/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement mpif.h:505.11: Included at piolib_mod.F90:35: SAVE /MPIFCMB7/,/MPIFCMB8/ 1 Warning: SAVE statement at (1) follows blanket SAVE statement gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include piodarray.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pionfatt_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pionfput_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pionfget_mod.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done mpif90 -c -ffree-line-length-none /usr/local/mpich2-1.3.1/include -DSYSLINUX -DLINUX -DCPRUNKNOWNCPR -DSPMD -DHAVE_MPI -DUSEMPIIO -D_NETCDF -D_NOPNETCDF -D_NOUSEMCT -D_USEBOX -DNO_SIZEOF /usr/local/mpich2-1.3.1/include -I/usr/local/netcdf-4.1.1/include pio_nf_utils.F90 gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done gfortran: /usr/local/mpich2-1.3.1/include: linker input file unused because linking not done rm -f libpio.a ar cq libpio.a topology.o pnetcdfversion.o pio.o pio_kinds.o nf_mod.o ionf_mod.o pio_types.o piolib_mod.o pio_mpi_utils.o pio_nf_utils.o pio_utils.o pio_quicksort.o pionfatt_mod.o pionfread_mod.o pionfwrite_mod.o pionfput_mod.o pionfget_mod.o alloc_mod.o box_rearrange.o rearrange.o pio_support.o mct_rearrange.o iompi_mod.o piodarray.o pio_spmd_utils.o gmake[1]: Leaving directory `/usr/workdir/cesm1_0_2/scripts/test1/pio'