Configuring with args --prefix=/home/eng923/software/mpich-1.2.7 Configuring MPICH Version 1.2.7 (release) of : 2005/11/04 11:54:51 checking whether filesystem respects case in file names... yes checking for current directory name... /opt/mpich-1.2.7p1 checking for architecture... LINUX checking for device... ch_p4 checking for install checking for ar... found /usr/bin/ar () checking for ranlib checking for gnumake... yes using --no-print-directory checking whether make supports include... yes checking for OSF V3 make... no checking for virtual path format... VPATH checking for xlC checking for g++ checking whether g++ returns correct error code... yes Compiling C++ interface with g++ checking whether selected C++ compiler can compile iostream.h... yes Include C++ bindings for MPI from http://www.osl.iu.edu/research/mpi2c++ Send bug reports about the C++ to mpi2cpp-devel@osl.iu.edu checking for g++ compiler exception flags... -fexceptions checking for cc... found /usr/bin/cc (cc) checking whether the compiler cc accepts ANSI prototypes... yes checking for f77... found /usr/bin/f77 (f77) checking for f77... found /usr/bin/f77 (1) checking for ar... found /usr/bin/ar (ar) checking for whether compiler works... yes checking whether the compiler cc accepts ## for concatenation in cpp... yes checking whether the compiler cc accepts const modifier... yes checking for extension on executables... none checking how to run the C preprocessor checking for AIX checking for minix/config.h checking for volatile... yes Running device-specific setup program About to do p4 device Finished setting p4arch... Configuring p4 subsystem... checking for gcc... cc checking whether the C compiler (cc ) works... yes checking whether the C compiler (cc ) is a cross-compiler... no checking whether we are using GNU C... yes checking whether cc accepts -g... yes checking whether signals work correctly... yes checking whether cross-compiling... no checking for remsh... no checking for rsh... /usr/kerberos/bin/rsh checking whether /usr/kerberos/bin/rsh works... no Errors while trying to run true on cops-021026 with rsh connect to address 139.133.222.26 port 544: Connection refused connect to address 139.133.222.26 port 544: Connection refused trying normal rsh (/usr/bin/rsh) cops-021026.eng.abdn.ac.uk: Connection refused checking for ssh... /usr/bin/ssh checking whether /usr/bin/ssh works... no Errors while trying to run true on cops-021026 with ssh Permission denied (publickey,gssapi-with-mic,password). checking size of int... 4 checking size of long... 8 checking for gettimeofday... yes checking for BSDgettimeofday... no checking for setsid... yes checking for isatty... yes checking for hostname... found /bin/hostname () Creating util/machines/machines.LINUX creating ./config.status creating localdefs creating mpich-mpid.h Configuring with args -p4arch=LINUX -p4make=make --no-print-directory -opt= -cc=cc -p4comm= -p4device=ch_p4 -srcdir=/opt/mpich-1.2.7p1/mpid/ch_p4/p4 -exec-prefix=/home/eng923/software/mpich-1.2.7 -libbuild_dir=/opt/mpich-1.2.7p1/lib -cflags= Setting p4arch to LINUX Setting p4make to make --no-print-directory Setting p4comm to Setting p4device to ch_p4 checking for ranlib checking whether cross-compiling... no checking for rpc/rpc.h... yes checking for netinet/in.h... yes checking for arpa/inet.h... yes checking for sys/socketvar.h... yes checking for stdlib.h... yes checking for unistd.h... yes checking for string.h... yes checking for strings.h... yes checking for termio.h... yes checking for termios.h... yes checking for sys/types.h... yes checking for sys/wait.h... yes checking that time.h and sys/time.h can both be included... yes checking for time.h... yes checking that string.h and strings.h can be included... yes checking for correct headers with rpc/rpc.h... yes checking for correct headers with netinet/in.h... yes checking for stdarg.h... yes checking whether stdarg is oldstyle... no checking whether stdarg is correct... yes checking whether programs using stdarg link... yes checking for sigprocmask... yes checking for sigemptyset... yes checking for sigaddset... yes checking for sighold... yes checking for sigsetmask... yes checking for sigblock... yes checking for sigaction... yes checking for for struct sigaction... yes checking for for union semun... no checking for whether semctl needs union semun... yes checking for strerror... yes checking for whether sys_errlist needs do be defined... yes checking for -lcrypt... yes checking for vprintf... yes checking for sys/uio.h... yes checking for writev... yes checking for sched.h... yes checking for sched_yield... yes checking for getwd... yes checking for echo off supported with sgttyb... no checking for if getsockopt wants socklen_t... yes checking if xdr_array wants u_int... yes checking for xdrmem_create... yes checking for xdr_float... yes checking for XDR includes and functions... yes checking for rpc/xdr.h compiles... yes checking byte ordering creating config.status creating Makefile creating lib/Makefile creating alog/Makefile creating usc/Makefile creating usc/usctest/Makefile creating messages/Makefile creating include/Makefile creating lib_f/Makefile creating contrib/Makefile creating contrib_f/Makefile creating bin/Makefile creating doc/Makefile creating messages_f/Makefile creating misc/Makefile creating monitors/Makefile creating servers/Makefile creating p4_config.h Finished configuring the p4 subsystem Configuring new p4 secure server checking for gcc... cc checking whether the C compiler (cc -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR ) works... yes checking whether the C compiler (cc -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR ) is a cross-compiler... no checking whether we are using GNU C... yes checking whether cc accepts -g... yes checking for ranlib... ranlib checking for virtual path format... VPATH checking for library containing xdr_array... none required checking for library containing socket... none required checking for library containing crypt... -lcrypt checking how to run the C preprocessor... cc -E checking for termios.h... yes checking for fcntl.h... yes checking for unistd.h... yes checking for sys/select.h... yes checking for stdlib.h... yes checking for index... yes checking for rindex... yes checking for seteuid... yes checking for setresuid... yes checking for setegid... yes checking for setresgid... yes checking for Kerberos (/usr/kerberos)... yes checking for ka_UserAuthenticateGeneral... no checking for AFS (/usr/afsws)... no checking for SSL in cache... no. checking manually checking for include directory for ssl... no checking for strings.h... yes checking for string.h... yes checking for getopt... yes checking for strerror... yes checking for posix signal in cache... no. checking manually checking for sigaction... yes checking for sigemptyset... yes checking for sigaddset... yes checking for sigprocmask... yes checking for waitpid... yes checking for setpgrp... yes checking whether setpgrp takes no argument... yes checking if getsockopt wants socklen_t... yes creating ./config.status creating Makefile creating server.h Finished configuring the p4 secure server checking whether cross-compiling... no checking for gethrtime... no checking for clock_gettime... no checking for clock_getres... no checking for how many arguments gettimeofday takes... two - whew checking for signal.h... yes checking for sigaction... yes checking for for struct sigaction... yes checking for weak symbol support... pragma weak checking whether weak symbols are visible to other files... yes checking for remsh... no checking for rsh... found /usr/kerberos/bin/rsh (rsh) checking for perl5... no checking for perl... found /usr/bin/perl (perl) checking for byte ordering... little endian checking for XDR include... yes checking for XDR functions... yes checking for uname... yes checking for netdb.h... yes checking for gethostbyname... yes checking whether C++ compiler also has gethostbyname... yes checking whether Fortran programs can link with needed C functions... yes checking whether C++ programs can link with needed C functions... yes checking for catopen... yes checking for catclose... yes checking for catgets... yes checking for gencat... found /usr/bin/gencat (1) checking for nl_types.h... yes checking for ANSI C header files checking for stdlib.h... yes checking for string.h... yes checking for unistd.h... yes checking for stdarg.h... yes checking whether stdarg is oldstyle... no checking whether stdarg is correct... yes checking whether programs using stdarg link... yes checking for malloc return type... void checking for system... yes checking for nice... yes checking for strdup... yes checking for memory.h... yes checking for sys/ioctl.h... yes checking for sys/sockio.h... no checking whether the compiler cc runs... yes checking whether the compiler f77 runs... yes checking for correct handling of conditionals...... yes checking for correct handling of conditionals part 2 ...... yes checking for correct handling of #elif... yes checking that constant folding in arrays works... yes checking that structs are handled properly... yes checking that compiler truncates unsigned char correctly ...... yes checking that compiler/hardware has commutative arithmetic ...... yes checking that compiler assigns to char correctly ...... yes checking that compiler does not call unknown routines for long doubles... yes checking that compiler accepts args correctly ...... yes checking whether ranlib works... yes checking for broken handling of common symbols... no checking for ar... found /usr/bin/ar (1) checking for size of void *... 8 checking for pointers greater than 32 bits... yes checking for size of int... 4 checking for int large enough for pointers... no checking for C integer type for MPI_Aint... checking for size of long... 8 C integer type for MPI_Aint is... long checking for long long... yes checking whether compiler can handle loops with long long... yes checking for long double... yes checking for size of double... 8 checking for size of long double... 16 checking for structure alignment... largest checking for sync... found /bin/sync (1) checking whether mpich can be used as the library name... yes Configuring Fortran subsystem checking for cc... cc checking whether the C compiler sets its return status correctly... yes checking for an ANSI C-conforming const... no checking for Fortran 77 compiler default output file name... a.out checking whether the Fortran 77 compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking for f90... f90 checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... yes checking whether f90 accepts -g... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for ranlib... ranlib checking how to run the C preprocessor... cc -E checking for routines to access the command line from Fortran 77... searching... checking whether f77 works with GETARG and IARGC... yes checking how to compile and link Fortran 90 programs with Fortran 77 programs that access the command line... searching... checking if f90 works... yes checking how to get verbose linking output from f77 ... -v checking for Fortran libraries of f77 ... -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm -lgcc_s checking whether C can link with -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm -lgcc_s... yes checking for linker for Fortran main programs... Use Fortran to link programs checking for Fortran 77 name mangling... lower doubleunderscore checking for which Fortran libraries are needed to link C with Fortran... none checking whether Fortran accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking whether Fortran has pointer declaration... no checking for size of Fortran type integer... 4 checking for size of Fortran type real... 4 checking for size of Fortran type double precision... 8 checking for egrep... grep -E checking for ANSI C header files... yes checking for stdlib.h... yes checking for string.h... yes checking for stdarg.h... yes checking whether stdarg is oldstyle... no checking whether stdarg works... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for char... yes checking size of char... 1 checking for short... yes checking size of short... 2 checking for int... yes checking size of int... 4 checking for long... yes checking size of long... 8 checking for long long... yes checking size of long long... 8 checking for float... yes checking size of float... 4 checking for double... yes checking size of double... 8 checking for long double... yes checking size of long double... 16 checking for void*... yes checking size of void*... 8 checking for C type matching Fortran integer*1... char checking for C type matching Fortran integer*2... short checking for C type matching Fortran integer*4... int checking for C type matching Fortran integer*8... long checking for C type matching Fortran real*4... float checking for C type matching Fortran real*8... double checking for C type matching Fortran integer... int checking whether C compiler allows unaligned doubles... yes checking for type of weak symbol support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking for values of Fortran logicals... True is 1 and False is 0 checking for Fortran 90 integer kind for 8-byte integers... 8 checking for Fortran 90 integer kind for 8-byte integers... 8 (cached) Setting up F90 Module support Configure in /opt/mpich-1.2.7p1/f90modules creating cache ./config.cache checking whether the Fortran 77 compiler (f77 ) works... yes checking whether the Fortran 77 compiler (f77 ) is a cross-compiler... no checking whether we are using GNU Fortran 77... yes checking whether f77 accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (f90 ) works... yes checking whether the Fortran 90 compiler (f90 ) is a cross-compiler... no checking for a BSD compatible install... /usr/bin/install -c checking whether ln -s works... yes checking for ar... ar checking for ranlib... ranlib checking whether make echos directory changes... yes using --no-print-directory checking for virtual path format... VPATH checking for module suffix... mod checking for case of module names... lower checking for module directory path flag... -I checking that the compiler f90 accepts .f90 suffix... yes checking whether Fortran 90 is compatible with Fortran 77... no configure: error: Fortran 90 and Fortran 77 compilers are not compatible. They generate external symbol names that are different. checking whether using gcc and g77 together... no configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/farg.f config.status: creating include/mpif.h config.status: creating include/mpi_fortdefs.h config.status: creating src/mpif77 config.status: creating src/mpif77.conf config.status: creating src/mpif90 config.status: creating src/mpif90.conf config.status: creating src/initfcmn.f config.status: creating src/initfdte.f config.status: creating mpi_fortconf.h config.status: executing default-1 commands config.status: executing default-2 commands config.status: executing default-3 commands config.status: executing default-4 commands config.status: executing default-5 commands config.status: executing default-6 commands Done configuring Fortran subsystem Configuring ROMIO, for support of MPI-IO checking whether compiler allows define a(b) a(b,__LINE__)... yes Configuring with args --with-mpi=mpich --cache-file=/dev/null checking for architecture... LINUX ROMIO home directory is /opt/mpich-1.2.7p1/romio checking for ranlib... ranlib checking for gcc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ANSI C... none needed checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking how to run the C preprocessor... cc -E checking for memalign... yes checking Fortran external names Fortran externals are lower case and have two trailing underscores checking for inline... inline checking how to run the C preprocessor... cc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for int... yes checking size of int... 4 checking for void*... yes checking size of void*... 8 checking for int large enough for pointers... no checking for long long... yes checking size of long long... 8 checking for weak symbol support... pragma weak checking that weak symbols are visible to other files... yes checking whether struct flock compatible with MPI_Offset... yes checking configured file systems... testfs ufs nfs configure: WARNING: File locks may not work with NFS. See the Installation and users manual for instructions on testing and if necessary fixing this checking for library containing pthread_create... -lpthread checking for library containing aio_write... -lrt checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking if aio.h exists and can be compiled... yes checking if sys/aio.h exists and can be compiled... no checking whether aio routines can be used... yes checking for obsolete two-argument aio_write... no checking for obsolete two-argument aio_suspend... no checking for aio_fildes member of aiocb structure... yes checking for aio_whence member of aiocb structure... no checking for aio_handle member of aiocb structure... no checking for aio_reqprio member of aiocb structure... yes checking for aio_sigevent member of aiocb structure... yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking whether struct statfs properly defined... yes checking for f_fstypename member of statfs structure... no checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for stat... yes checking for st_fstype member of stat structure... no checking for sys/types.h... (cached) yes checking for sys/statvfs.h... (cached) yes checking for sys/vfs.h... (cached) yes checking for statvfs... yes checking for f_basetype member of statvfs structure... no checking for unistd.h... (cached) yes checking for large file defines... yes checking whether off64_t is an scalar type... yes checking for strerror... yes checking for doctext... no checking for strdup... no checking for snprintf... no checking for lstat... no checking for readlink... no checking for fsync... no checking for ftruncate... no checking for restrict... no checking whether __attribute__ allowed... no checking whether __attribute__((format)) allowed... no setting CC to /opt/mpich-1.2.7p1/bin/mpicc setting F77 to f77 setting TEST_CC to /opt/mpich-1.2.7p1/bin/mpicc setting TEST_F77 to /opt/mpich-1.2.7p1/bin/mpif77 setting CFLAGS to -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H -DFORTRANDOUBLEUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H setting USER_CFLAGS to setting USER_FFLAGS to configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpi-io/Makefile config.status: creating mpi2-other/info/Makefile config.status: creating mpi2-other/array/Makefile config.status: creating adio/common/Makefile config.status: creating test/Makefile config.status: creating test/misc.c config.status: creating test/large_file.c config.status: creating test/runtests config.status: creating util/romioinstall config.status: creating include/mpio.h config.status: creating include/mpiof.h config.status: creating adio/ad_nfs/Makefile config.status: creating adio/ad_ufs/Makefile config.status: creating adio/ad_panfs/Makefile config.status: creating adio/ad_xfs/Makefile config.status: creating adio/ad_sfs/Makefile config.status: creating adio/ad_pfs/Makefile config.status: creating adio/ad_testfs/Makefile config.status: creating adio/ad_pvfs/Makefile config.status: creating adio/ad_pvfs2/Makefile config.status: creating adio/ad_gridftp/Makefile config.status: creating mpi-io/fortran/Makefile config.status: creating mpi2-other/info/fortran/Makefile config.status: creating mpi2-other/array/fortran/Makefile config.status: creating test/fmisc.f config.status: creating test/fcoll_test.f config.status: creating test/pfcoll_test.f config.status: creating test/fperf.f config.status: creating mpi-io/glue/mpich2/Makefile config.status: creating mpi-io/glue/mpich1/Makefile config.status: creating mpi-io/glue/default/Makefile config.status: creating adio/include/romioconf.h config.status: executing default-1 commands Finished configuring ROMIO Configuring MPE Profiling Libraries with --enable-mpich --disable-checkMPI --with-f2cmpilibs=-lfmpich --with-flib_path_leader=-L --prefix=/home/eng923/software/mpich-1.2.7 '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' --includedir=/home/eng923/software/mpich-1.2.7/include checking gnumake... no checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH This MPE build is part of the MPICH build checking host system type... x86_64-unknown-linux-gnu checking for cc... cc checking whether the C compiler (cc -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H ) works... yes checking whether the C compiler (cc -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H ) is a cross-compiler... no checking whether the C compiler sets its return status correctly... yes checking whether we are using GNU C... yes checking for object suffix... o checking for Cygwin environment... no checking for mingw32 environment... no checking for executable suffix... no checking for ranlib... ranlib checking whether MPI_CC has been set ... /opt/mpich-1.2.7p1/bin/mpicc checking whether the Fortran 77 compiler (f77 ) works... yes checking whether the Fortran 77 compiler (f77 ) is a cross-compiler... no checking whether we are using GNU Fortran 77... yes checking whether f77 accepts -g... yes checking whether MPI_F77 has been set ... /opt/mpich-1.2.7p1/bin/mpif77 checking for Fortran 77 libraries... -lfrtbegin -lg2c -lm -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lm -lgcc_s checking Whether C can link with -lfrtbegin -lg2c -lm -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lm -lgcc_s... yes checking for Fortran 77 name mangling... lower doubleunderscore checking for MPI_STATUS_IGNORE ... no checking how to run the C preprocessor... cc -E checking for X... no configure: warning: Could not find appropriate X windows libraries. MPE routines that make use of X11 graphics will NOT be built unless you put X windows libraries in your path and reconfigure checking for dbx... no checking for gdb... /usr/bin/gdb checking for ANSI C header files... yes checking for working const... yes checking whether byte ordering is bigendian... no checking for long pointers... yes checking for system... yes checking for sysinfo... yes checking for mkstemp... yes checking for uname... yes checking for gethostbyname... yes checking for unistd.h... yes checking for large file support ... yes checking for stdlib.h... yes checking for string.h... yes checking for netdb.h... yes checking for sys/systeminfo.h... no checking for getopt.h... yes checking for stdarg.h... yes checking for stdarg is correct... yes checking if compiler accepts prototypes... yes checking for sighandler_t... no checking for ar... ar creating ./config.status creating Makefile creating sbin/mpeinstall creating src/Makefile creating src/Makefile_nompi creating src/dbxerr.c creating contrib/life/Makefile creating contrib/mandel/Makefile creating contrib/mastermind/Makefile creating contrib/test/Makefile creating mpeconf.h configuring in slog2sdk running /bin/sh /opt/mpich-1.2.7p1/mpe/slog2sdk/configure --enable-mpich --disable-checkMPI --with-f2cmpilibs=-lfmpich --with-flib_path_leader=-L --prefix=/home/eng923/software/mpich-1.2.7 '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' --includedir=/home/eng923/software/mpich-1.2.7/include --cache-file=.././config.cache --srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk Configuring SLOG2SDK with '--enable-mpich' '--disable-checkMPI' '--with-f2cmpilibs=-lfmpich' '--with-flib_path_leader=-L' '--prefix=/home/eng923/software/mpich-1.2.7' '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' '--includedir=/home/eng923/software/mpich-1.2.7/include' '--cache-file=.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk' checking gnumake... no checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH checking if CLASSPATH is set... no, good to go checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for java in user's PATH... found /usr/bin/java checking if /usr/bin/java works... yes checking if /usr/bin/java runs simple jar file... yes checking if /usr/bin/java runs simple Swing class... yes checking if /usr/bin/java runs simple Swing jar file... yes checking for Java version... java full version "1.6.0-b09", i.e. Java 2 SDK checking for cygpath... no checking for leftover Makefiles in subpackages ... none configure: creating ./config.status config.status: creating Makefile config.status: creating sbin/install-package config.status: creating bin/slog2print config.status: creating bin/slog2navigator config.status: creating bin/slog2filter config.status: creating bin/slog2updater config.status: creating bin/logconvertor config.status: creating bin/jumpshot config.status: creating bin/clogprint config.status: creating bin/clogTOslog2 config.status: creating bin/clog2print config.status: creating bin/clog2TOslog2 configure: configuring in trace_sample configure: running /bin/sh '/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_sample/configure' --prefix=/home/eng923/software/mpich-1.2.7 '--enable-mpich' '--disable-checkMPI' '--with-f2cmpilibs=-lfmpich' '--with-flib_path_leader=-L' '--prefix=/home/eng923/software/mpich-1.2.7' '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' '--includedir=/home/eng923/software/mpich-1.2.7/include' '--cache-file=.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk' --cache-file=../.././config.cache --srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_sample Configuring TRACE_SAMPLE implementation with '--enable-mpich' '--disable-checkMPI' '--with-f2cmpilibs=-lfmpich' '--with-flib_path_leader=-L' '--prefix=/home/eng923/software/mpich-1.2.7' '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' '--includedir=/home/eng923/software/mpich-1.2.7/include' '--cache-file=.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk' '--cache-file=../.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_sample' 'CC=cc' 'CFLAGS= -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H' 'F77=f77 ' checking gnumake... no checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH checking for gcc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ANSI C... none needed checking how to run the C preprocessor... cc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for string.h... (cached) yes checking for an ANSI C-conforming const... yes checking whether byte ordering is bigendian... no checking for void*... yes checking size of void*... 8 checking for int... yes checking size of int... 4 checking for long... yes checking size of long... 8 checking for long long... yes checking size of long long... 8 checking for __int64... no checking size of __int64... 0 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for sed... sed checking for a sed that does not truncate output... /bin/sed checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognise dependent libraries... pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from cc object... ok checking for objdir... .libs checking for ar... ar checking for ranlib... ranlib checking for strip... strip checking if cc static flag works... yes checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC checking if cc PIC flag -fPIC works... yes checking if cc supports -c -o file.o... yes checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for malloc in -lefence... no checking for strstr... yes checking target system type... x86_64-unknown-linux-gnu checking for javah in user's PATH... not found checking for javah in known locations... not found configure: WARNING: Invalid JNI include dir, exit! configure: configuring in trace_rlog configure: running /bin/sh '/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_rlog/configure' --prefix=/home/eng923/software/mpich-1.2.7 '--enable-mpich' '--disable-checkMPI' '--with-f2cmpilibs=-lfmpich' '--with-flib_path_leader=-L' '--prefix=/home/eng923/software/mpich-1.2.7' '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' '--includedir=/home/eng923/software/mpich-1.2.7/include' '--cache-file=.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk' --cache-file=../.././config.cache --srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_rlog Configuring TRACE_RLOG implementation with '--enable-mpich' '--disable-checkMPI' '--with-f2cmpilibs=-lfmpich' '--with-flib_path_leader=-L' '--prefix=/home/eng923/software/mpich-1.2.7' '--libdir=${exec_prefix}/lib' '--bindir=${exec_prefix}/bin' '--includedir=/home/eng923/software/mpich-1.2.7/include' '--cache-file=.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk' '--cache-file=../.././config.cache' '--srcdir=/opt/mpich-1.2.7p1/mpe/slog2sdk/trace_rlog' 'CC=cc' 'CFLAGS= -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H' 'F77=f77 ' checking gnumake... no checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH checking for gcc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ANSI C... none needed checking how to run the C preprocessor... cc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for string.h... (cached) yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking for an ANSI C-conforming const... yes checking whether byte ordering is bigendian... no checking for void*... yes checking size of void*... 8 checking for int... yes checking size of int... 4 checking for long... yes checking size of long... 8 checking for long long... yes checking size of long long... 8 checking for __int64... no checking size of __int64... 0 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for sed... sed checking for a sed that does not truncate output... /bin/sed checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognise dependent libraries... pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from cc object... ok checking for objdir... .libs checking for ar... ar checking for ranlib... ranlib checking for strip... strip checking if cc static flag works... yes checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC checking if cc PIC flag -fPIC works... yes checking if cc supports -c -o file.o... yes checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for malloc in -lefence... no checking for strstr... yes checking target system type... x86_64-unknown-linux-gnu checking for javah in user's PATH... not found checking for javah in known locations... not found configure: WARNING: Invalid JNI include dir, exit! configure: WARNING: SLOG2SDK: No sub-package has been configured Done configuring MPE Profiling Libraries checking whether head command is broken... no creating config.status creating Makefile creating util/Makefile creating examples/Makefile creating src/pt2pt/Makefile creating src/coll/Makefile creating src/context/Makefile creating src/dmpi/Makefile creating src/env/Makefile creating src/topol/Makefile creating src/profile/Makefile creating src/coll2/Makefile creating src/util/Makefile creating src/infoexport/Makefile creating examples/basic/Makefile creating src/misc2/Makefile creating src/external/Makefile creating mpichconf.h creating util/mpicc creating util/mpicxx creating util/mpiinstall creating util/mpirun creating util/mpichlib.conf creating util/mpiman creating util/chkserv creating util/chkmachine creating util/tstmachines creating include/mpidefs.h creating include/mpif.f90 Creating mpif.h from Fortran and Romio contributions Configuring the test suite... Configuring with args -basecc=cc -cc=/opt/mpich-1.2.7p1/bin/mpicc -make=make --no-print-directory -device=ch_p4 -mpichpath=/opt/mpich-1.2.7p1/bin --enable-boot -cflags= -DUSE_SOCKLEN_T -DUSE_U_INT_FOR_XDR -DHAVE_MPICHCONF_H -basefc=f77 -fc=/opt/mpich-1.2.7p1/bin/mpif77 --enable-io checking whether cross-compiling... no checking whether the compiler cc runs... yes checking whether the compiler f77 runs... yes checking whether we are using GNU Fortran 77... yes checking for gnumake... no checking whether make supports include... yes checking for OSF V3 make... no checking for virtual path format... VPATH checking for stdlib.h... yes checking for unistd.h... yes checking for string.h... yes checking for stdarg is correct... yes checking for long double... yes checking for long long... yes checking whether compiler can handle loops with long long... yes checking whether the compiler cc accepts ANSI prototypes... yes checking for signal.h... yes checking for sigaction... yes checking for sleep... yes checking for sysconf... yes checking for sizeof MPI_Offset... 8 checking for libraries needed for Fortran command line access... unable to determine creating config.status creating Makefile creating pt2pt/Makefile creating coll/Makefile creating topol/Makefile creating context/Makefile creating env/Makefile creating profile/Makefile creating io/Mfile creating pt2pt/runtests creating coll/runtests creating topol/runtests creating context/runtests creating command/runtests creating env/runtests creating profile/runtests creating io/rtest creating io/misc.c creating io/fmisc.f creating io/fcoll_test.f creating io/pfcoll_test.f creating io/large_file.c creating io/fperf.f Configuring the performance tests ... Configure in /opt/mpich-1.2.7p1/examples/perftest creating cache ./config.cache checking for a BSD compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking whether make --no-print-directory sets ${MAKE}... yes checking for working aclocal... found checking for working autoconf... found checking for working automake... found checking for working autoheader... found checking for working makeinfo... found checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for cit... no checking for gnuplot... gnuplot checking how to run the C preprocessor... cc -E checking whether C compiler accepts option -O4 -Ofast... no checking whether C compiler accepts option -Ofast... no checking whether C compiler accepts option -fast... no checking whether C compiler accepts option -O3... yes checking whether routines compiled with -O3 can be linked with ones compiled without -O3... yes checking for library containing fabs... -lm checking for ANSI C header files... yes checking for sys/time.h... yes checking for stdlib.h... yes checking for string.h... yes checking whether time.h and sys/time.h may both be included... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for working const... yes checking for restrict... __restrict checking for long long... yes updating cache ./config.cache creating ./config.status creating Makefile creating mpptestconf.h creating mpid/ch_p4/Makefile creating mpid/tests/Makefile creating mpichconf.h mpichconf.h is unchanged *# ---> *# You should register your copy of MPICH with us by sending mail *# to majordomo@mcs.anl.gov containing the message *# subscribe mpi-users *# This will allow us to notify you of new releases of MPICH. *# *# You can also check the MPICH home page at *# http://www.mcs.anl.gov/mpi/mpich *# ---< Configuration completed.