Hi<br><br>Thanks for the replies, but I get following errors.<br><br>1. If I do only build in /tmp<br>cannot create regular file `/index.htm': Permission denied<br><br>2. if I do everything in /tmp, then the following error. <br>
" Making all in mpl<br>/bin/sh: line 17: cd: mpl: No such file or directory<br>make[3]: *** [all-recursive] Error 1"<br><br>I have sent both log files earlier.<br>Yes, the /home/vss is network file system. I have no root access to the system.<br>
<br>Is there any way out of this?<br>Please help.<br><br><br>Thanks<br>Preeti<br><br><br><br><br><div class="gmail_quote">On Thu, Mar 11, 2010 at 11:18 PM, Rajeev Thakur <span dir="ltr"><<a href="mailto:thakur@mcs.anl.gov">thakur@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">Just untar and build it again on a local disk. The install directory<br>
(--prefix option to configure) can be on NFS.<br>
<font color="#888888"><br>
Rajeev<br>
</font><div><div></div><div class="h5"><br>
> -----Original Message-----<br>
> From: <a href="mailto:mpich-discuss-bounces@mcs.anl.gov">mpich-discuss-bounces@mcs.anl.gov</a><br>
> [mailto:<a href="mailto:mpich-discuss-bounces@mcs.anl.gov">mpich-discuss-bounces@mcs.anl.gov</a>] On Behalf Of<br>
> <a href="mailto:chan@mcs.anl.gov">chan@mcs.anl.gov</a><br>
> Sent: Thursday, March 11, 2010 11:48 AM<br>
> To: <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> Subject: Re: [mpich-discuss] mpich2-1.2.1p1 - cannot create<br>
> regular file `/index.htm': Permission denied<br>
><br>
><br>
> Is your /home/vss a local filesystem or some type<br>
> network file system ? If /home/vss is a network<br>
> filesystem, the problem could be incorrect clock<br>
> on the filesystem. If so, could you copy<br>
> everything to a local filesystem like /tmp(assuming<br>
> it is big enough) and try again ?<br>
><br>
> ----- "Preeti" <<a href="mailto:preeti@csa.iisc.ernet.in">preeti@csa.iisc.ernet.in</a>> wrote:<br>
><br>
> > Hello<br>
> ><br>
> > I have rebuilt everything without setting the flags also<br>
> ><br>
> > /home/vss/preeti/bin/mpich2-1.2.1p1/configure<br>
> > --prefix=/home/vss/preeti/bin/2-1.2.1build --enable-f90 2>&1 | tee<br>
> > c.log<br>
> ><br>
> > make 2>&1 | tee m.log<br>
> > make install 2>&1 | tee mi.log<br>
> ><br>
> ><br>
> > and this time I get the following error<br>
> ><br>
> > /usr/bin/install -c -m 644 index.htm /index.htm<br>
> > /usr/bin/install: cannot create regular file `/index.htm':<br>
> Permission<br>
> > denied<br>
> > mkdir: cannot create directory `/www1': Permission denied<br>
> ><br>
> ><br>
> > The log files are attached.<br>
> > What am I missing?<br>
> ><br>
> > Appreciate your help.<br>
> ><br>
> ><br>
> > Thanks<br>
> > Preeti<br>
> ><br>
> ><br>
> ><br>
> ><br>
> > On Thu, Mar 11, 2010 at 4:37 PM, Preeti <<a href="mailto:preeti@csa.iisc.ernet.in">preeti@csa.iisc.ernet.in</a>><br>
> > wrote:<br>
> ><br>
> > > Hello<br>
> > ><br>
> > > I have rebuilt everything from scratch and did vpath build.<br>
> > > I set the following<br>
> > ><br>
> > ><br>
> > > export F90=gfortran<br>
> > > export F77=gfortran<br>
> > > export LD_LIBRARY_PATH=/usr/lib64:/lib:/usr/lib<br>
> > > export LD_RUN_PATH=/usr/lib64:/lib:/usr/lib<br>
> > ><br>
> > > /home/vss/preeti/bin/mpich2-1.2.1p1/configure<br>
> > > --prefix=/home/vss/preeti/bin/2-1.2.1p1 --enable-f90 2>&1 | tee<br>
> > c.log<br>
> > ><br>
> > > make 2>&1 | tee m.log<br>
> > ><br>
> > ><br>
> > > Then I get the error<br>
> > ><br>
> > > Making all in mpl<br>
> > > /bin/sh: line 17: cd: mpl: No such file or directory<br>
> > ><br>
> > > make[3]: *** [all-recursive] Error 1<br>
> > ><br>
> > > The files are attached.<br>
> > > Please help.<br>
> > ><br>
> > ><br>
> > > Thanks<br>
> > > Preeti<br>
> > ><br>
> > ><br>
> > ><br>
> > ><br>
> > ><br>
> > ><br>
> > > On Thu, Mar 11, 2010 at 1:53 AM, <<a href="mailto:chan@mcs.anl.gov">chan@mcs.anl.gov</a>> wrote:<br>
> > ><br>
> > >><br>
> > >> I don't think setting F77 and F90 causes the problem that<br>
> > >> you are seeing. The directories or subpackges that have<br>
> > >> problems use a different build system than the majority of<br>
> > >> mpich2 base, so it could be that there is bugs in the<br>
> build system<br>
> > >> in those subpackage.<br>
> > >><br>
> > >> Since you didn't do "make distclean" before you reconfigure, so<br>
> > >> the m.log(.old) do not tell me much. Can you rebuild everything<br>
> > >> from scratch ? i.e. untar the mpich2 tarball in a different<br>
> > location.<br>
> > >> Instead of doing an inpath build (i.e. cd mpich2-1.2.1p1/ ;<br>
> > >> ./configure....),<br>
> > >> could you do a VPATH build as documented in the README<br>
> (search for<br>
> > the<br>
> > >> word VPATH)? Send us the configure and make outputs again<br>
> > >> (be sure to add 2>&1 in creating the output files).<br>
> > >><br>
> > >> A.Chan<br>
> > >><br>
> > >><br>
> > >> ----- "Preeti" <<a href="mailto:preeti@csa.iisc.ernet.in">preeti@csa.iisc.ernet.in</a>> wrote:<br>
> > >><br>
> > >> > Hello<br>
> > >> ><br>
> > >> > Thank you for the quick response.<br>
> > >> ><br>
> > >> > I forgot to mention that I had set two flags earlier.<br>
> > >> > export F90=gfortran<br>
> > >> > export F77=gfortran<br>
> > >> ><br>
> > >> > The earlier problem is gone when I compiled without setting<br>
> > these. I<br>
> > >> > am<br>
> > >> > attaching all log files, the earlier ones and the new ones.<br>
> > >> ><br>
> > >> > Now I am facing another error which is from "make install 2>& |<br>
> > tee<br>
> > >> > mi.log"<br>
> > >> ><br>
> > >> > /usr/bin/install: cannot create regular file `/index.htm':<br>
> > Permission<br>
> > >> > denied<br>
> > >> ><br>
> > >> > Probably some variable is not set. I tried setting docdir too.<br>
> > >> > mi.log is also attached.<br>
> > >> ><br>
> > >> > Please help.<br>
> > >> ><br>
> > >> ><br>
> > >> > Thanks<br>
> > >> > Preeti<br>
> > >> ><br>
> > >> ><br>
> > >> ><br>
> > >> > On Wed, Mar 10, 2010 at 9:33 PM, <<a href="mailto:chan@mcs.anl.gov">chan@mcs.anl.gov</a>> wrote:<br>
> > >> ><br>
> > >> > ><br>
> > >> > > It is unclear what went wrong based on what you've<br>
> provided so<br>
> > far.<br>
> > >> > > Can you send us the configure and make outputs as stated in<br>
> > the<br>
> > >> > > README (be sure to include the stderr in the output file) ?<br>
> > >> > ><br>
> > >> > > ----- "Preeti" <<a href="mailto:preeti@csa.iisc.ernet.in">preeti@csa.iisc.ernet.in</a>> wrote:<br>
> > >> > ><br>
> > >> > > > Hello<br>
> > >> > > ><br>
> > >> > > > I am trying to install mpich2-1.2.1p1 on a 64-bit Linux<br>
> > system.<br>
> > >> > > ><br>
> > >> > > > Configuration was successful.<br>
> > >> > > > ./configure --prefix=$HOME/local/mpich2-1.2.1<br>
> --enable-f90 |<br>
> > tee<br>
> > >> > > > c.log<br>
> > >> > ><br>
> > >> > > BTW, you didn't include stderr in c.log. Depends on<br>
> the shell<br>
> > you<br>
> > >> > > use, you need to either add "&" or "2>&1". See README for<br>
> > >> > details..<br>
> > >> > ><br>
> > >> > > A.Chan<br>
> > >> > ><br>
> > >> > > _______________________________________________<br>
> > >> > > mpich-discuss mailing list<br>
> > >> > > <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> > >> > > <a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
> > >> > ><br>
> > >> > > --<br>
> > >> > > This message has been scanned for viruses and<br>
> > >> > > dangerous content by MailScanner, and is<br>
> > >> > > believed to be clean.<br>
> > >> > ><br>
> > >> > ><br>
> > >> ><br>
> > >> > _______________________________________________<br>
> > >> > mpich-discuss mailing list<br>
> > >> > <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> > >> > <a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
> > >> _______________________________________________<br>
> > >> mpich-discuss mailing list<br>
> > >> <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> > >> <a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
> > >><br>
> > >> --<br>
> > >> This message has been scanned for viruses and<br>
> > >> dangerous content by MailScanner, and is<br>
> > >> believed to be clean.<br>
> > >><br>
> > >><br>
> > ><br>
> ><br>
> > _______________________________________________<br>
> > mpich-discuss mailing list<br>
> > <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> > <a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
> _______________________________________________<br>
> mpich-discuss mailing list<br>
> <a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
> <a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
><br>
<br>
_______________________________________________<br>
mpich-discuss mailing list<br>
<a href="mailto:mpich-discuss@mcs.anl.gov">mpich-discuss@mcs.anl.gov</a><br>
<a href="https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss" target="_blank">https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss</a><br>
<br>
--<br>
This message has been scanned for viruses and<br>
dangerous content by MailScanner, and is<br>
believed to be clean.<br>
<br>
</div></div></blockquote></div><br>