Configuring MPICH2 version 1.0.8p1 with ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' Running on system: Linux llabhpc3 2.6.9-78.0.22.ELsmp #1 SMP Fri Apr 24 12:48:19 EDT 2009 x86_64 x86_64 x86_64 GNU/Linux Executing mpich2prereq in /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3 with Executing mpich2prereq in /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/channels/sock sourcing /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/pm/mpd/mpich2prereq sourcing /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/pm/mpd/setup_pm checking for 2-gcc... no checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether C compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking for multiple weak symbol support... yes checking for 2-g77... no checking for 2-xlf... no checking for 2-f77... no checking for 2-frt... no checking for 2-pgf77... no checking for 2-cf77... no checking for 2-fort77... no checking for 2-fl32... no checking for 2-af77... no checking for 2-xlf90... no checking for 2-f90... no checking for 2-pgf90... no checking for 2-pghpf... no checking for 2-epcf90... no checking for 2-gfortran... no checking for 2-g95... no checking for 2-xlf95... no checking for 2-f95... no checking for 2-fort... no checking for 2-ifort... no checking for 2-ifc... no checking for 2-efc... no checking for 2-pgf95... no checking for 2-lf95... no checking for 2-ftn... no checking for g77... g77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether g77 accepts -g... yes checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from g77... -v checking for Fortran 77 libraries of g77... -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm checking whether g77 accepts the FLIBS found by autoconf... yes checking whether C can link with -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm... yes checking for linker for Fortran main programs... Use Fortran to link programs checking for Fortran 77 name mangling... lower doubleunderscore checking what libraries are needed to link Fortran programs with C routines that use stdio... none checking for 2-f90... no checking for 2-xlf90... no checking for 2-pgf90... no checking for 2-ifort... no checking for 2-epcf90... no checking for 2-f95... no checking for 2-fort... no checking for 2-xlf95... no checking for 2-lf95... no checking for 2-pathf95... no checking for 2-pathf90... no checking for 2-g95... no checking for 2-gfortran... no checking for 2-ifc... no checking for 2-efc... no checking for f90... no checking for xlf90... no checking for pgf90... no checking for ifort... no checking for epcf90... no checking for f95... no checking for fort... no checking for xlf95... no checking for lf95... no checking for pathf95... no checking for pathf90... no checking for g95... no checking for gfortran... no checking for ifc... no checking for efc... no checking that f works as the extension for Fortran 90 program... no checking for extension for Fortran 90 programs... unknown! checking whether Fortran accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking for which Fortran libraries are needed to link C with Fortran... none checking whether Fortran compiler processes .F files with C preprocessor... yes checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking whether the C++ compiler c++ can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether available... yes checking whether the compiler implements the namespace std... yes checking whether available... no checking for GNU g++ version... 3 . 4 checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/local/bin/perl checking for ar... ar checking for ranlib... ranlib checking for etags... no checking for killall... killall checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for 2-ranlib... (cached) ranlib checking whether install breaks libraries... no checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... no checking for bash... /bin/bash checking whether /bin/bash supports arrays... yes checking for doctext... false checking for location of doctext style files... unavailable checking for an ANSI C-conforming const... yes checking for volatile... yes checking for restrict... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... no checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking whether C compiler allows unaligned doubles... yes checking whether gcc supports __func__... yes Using gcc to determine dependencies checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... eight checking for max C struct floating point alignment... sixteen checking for max C struct alignment of structs with doubles... eight checking for max C struct floating point alignment with long doubles... sixteen checking if alignment of structs with doubles is based on position... no checking if alignment of structs with long long ints is based on position... no checking if double alignment breaks rules, find actual alignment... no checking for alignment restrictions on pointers... int or better checking size of char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of unsigned long... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of wchar_t... 4 checking size of void *... 8 checking for size of float int... 8 checking for size of double int... 12 checking for size of long int... 12 checking for size of short int... 6 checking for size of 2 int... 8 checking for size of long double int... 20 checking for sys/bitypes.h... yes checking for inttypes.h... (cached) yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for size of Fortran type integer... 4 checking for size of Fortran type real... 4 checking for size of Fortran type double precision... 8 checking whether integer*1 is supported... yes checking whether integer*2 is supported... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... no checking whether real*4 is supported... yes checking whether real*8 is supported... yes checking whether real*16 is supported... no checking for C type matching Fortran integer... int checking for size of MPI_Status... 20 checking for values of Fortran logicals... True is 1 and False is 0 checking whether Fortran compiler is a Fortran 90 compiler... no checking size of bool... 1 checking how to run the C++ preprocessor... c++ -E checking for complex... yes checking size of Complex... 8 checking size of DoubleComplex... 16 checking size of LongDoubleComplex... 32 checking if char * pointers use byte addresses... yes checking for alignment restrictions on ... no checking for alignment restrictions on int32_t... no checking for size of MPI_BSEND_OVERHEAD... 95 checking for gcc __asm__ and pentium cmpxchgl instruction... no checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... yes checking for gcc __asm__ and IA64 xchg4 instruction... no checking for ANSI C header files... (cached) no checking for stdlib.h... (cached) yes checking for stdarg.h... yes checking for sys/types.h... (cached) yes checking for inttypes.h... (cached) yes checking for limits.h... yes checking for stddef.h... yes checking for errno.h... yes checking for sys/socket.h... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for endian.h... yes checking for assert.h... yes checking for sys/uio.h... yes checking for size_t... yes checking for setitimer... yes checking for alarm... yes checking for vsnprintf... yes checking for vsprintf... yes checking whether vsnprintf needs a declaration... no checking for strerror... yes checking for snprintf... yes checking whether snprintf needs a declaration... no checking for va_copy... yes checking for working alloca.h... yes checking for alloca... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for clock_gettime... no checking for clock_getres... no checking for gethrtime... no checking for gettimeofday... yes sourcing /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/setup_device RUNNING SETUP_DEVICE FOR THE CH3 DEVICE sourcing /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/channels/sock/setup_channel RUNNING SETUP_CHANNEL FOR THE SOCK CHANNEL sourcing /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/common/sock/setup RUNNING SETUP FOR THE SOCK INTERFACE checking for pthread.h... yes checking for pthread_yield... no checking for library containing pthread_key_create... -lpthread checking for pthread_cleanup_push... no checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no checking for sched_yield... yes checking for yield... no checking for usleep... yes checking for sleep... yes checking for select... yes RUNNING CONFIGURE FOR CH3 DEVICE checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for assert.h... yes checking for limits.h... yes checking for string.h... yes checking for sys/types.h... yes checking for sys/uio.h... yes checking for uuid/uuid.h... yes checking for time.h... yes checking for ctype.h... yes checking for unistd.h... yes checking for arpa/inet.h... yes checking for sys/socket.h... yes checking for net/if.h... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... (cached) yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... (cached) yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... (cached) yes checking for pid_t... yes checking for inet_pton... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking for CFUUIDCreate... no checking for uuid_generate... no checking for time... yes checking for library containing uuid_generate... -luuid checking whether CPP accepts variable length argument lists... yes checking whether byte ordering is bigendian... no checking whether we can use struct ifconf... yes checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of void *... 8 checking for etags... true configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating util/Makefile config.status: creating util/shm/Makefile config.status: creating util/shmbase/Makefile config.status: creating channels/Makefile config.status: creating localdefs config.status: creating include/mpid_thread.h config.status: creating include/mpidi_ch3_conf.h config.status: include/mpidi_ch3_conf.h is unchanged config.status: executing default-1 commands copying /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/../common/thread/mpid_thread_mpe.c to src/mpid_thread.c === configuring in util/sock (/scratch/jm70674a/FORTE/tmpbuild/src/mpid/ch3/util/sock) configure: running /bin/sh /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/util/sock/configure --disable-option-checking '--prefix=/usr/local' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread ' --cache-file=/dev/null --srcdir=/scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/util/sock RUNNING CONFIGURE FOR CH3 UTIL SOCK ROUTINES checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for ar... ar checking for ranlib... ranlib checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for assert.h... yes checking for limits.h... yes checking for string.h... yes checking for sys/types.h... yes checking for sys/uio.h... yes checking for time.h... yes checking for ctype.h... yes checking for unistd.h... yes checking for arpa/inet.h... yes checking for sys/socket.h... yes checking for net/if.h... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... (cached) yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... (cached) yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... (cached) yes checking for pid_t... yes checking for inet_pton... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking whether CPP accepts variable length argument lists... yes checking whether byte ordering is bigendian... no checking whether we can use struct ifconf... yes checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of void *... 8 checking for etags... true configure: creating ./config.status config.status: creating Makefile config.status: creating ch3usockconf.h config.status: ch3usockconf.h is unchanged config.status: executing default-1 commands Updating dependency directories .deps === configuring in channels/sock (/scratch/jm70674a/FORTE/tmpbuild/src/mpid/ch3/channels/sock) configure: running /bin/sh /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/channels/sock/configure --disable-option-checking '--prefix=/usr/local' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread ' --cache-file=/dev/null --srcdir=/scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/ch3/channels/sock RUNNING CONFIGURE FOR THE SOCK CHANNEL checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for 2-ranlib... ranlib checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether install breaks libraries... no checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for ar... ar checking for ranlib... (cached) ranlib checking for net/if.h... yes checking how to run the C preprocessor... gcc -E checking for netdb.h... yes checking for sys/ioctl.h... yes checking for sys/socket.h... yes checking for sys/sockio.h... no checking for sys/types.h... yes checking for errno.h... yes checking for netinet/in.h... yes configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating localdefs config.status: creating include/mpidi_ch3i_sock_conf.h config.status: include/mpidi_ch3i_sock_conf.h is unchanged config.status: executing default-1 commands Updating dependency directories .deps RUNNING CONFIGURE FOR THE SOCK INTERFACE checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for strerror... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for ar... ar checking for ranlib... ranlib configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpidu_sock_conf.h config.status: mpidu_sock_conf.h is unchanged === configuring in poll (/scratch/jm70674a/FORTE/tmpbuild/src/mpid/common/sock/poll) configure: running /bin/sh /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/common/sock/poll/configure --disable-option-checking '--prefix=/usr/local' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread ' --cache-file=/dev/null --srcdir=/scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpid/common/sock/poll RUNNING CONFIGURE FOR THE POLL IMPLEMENTATION OF SOCK checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for inline... inline checking for poll... yes checking how to run the C preprocessor... gcc -E checking for assert.h... yes checking for errno.h... yes checking for fcntl.h... yes checking for limits.h... yes checking for netdb.h... yes checking for netinet/in.h... yes checking for netinet/tcp.h... yes checking for poll.h... yes checking for stdlib.h... yes checking for sys/param.h... yes checking for sys/poll.h... yes checking for sys/types.h... yes checking for sys/uio.h... yes checking for unistd.h... yes checking if struct poll is defined... yes checking if a simple program using poll() can be compiled... yes checking whether bit fields work in ip.h... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking for library containing socket... none required checking for library containing gethostbyname... none required checking whether socklen_t is defined (in sys/socket.h if present)... yes checking for etags... true configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpidu_socki_conf.h config.status: mpidu_socki_conf.h is unchanged config.status: executing default-1 commands Updating dependency directories .deps RUNNING CONFIGURE FOR LOCKS checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for ar... ar checking for ranlib... ranlib checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for yield... no checking for sched_yield... yes checking for usleep... yes checking for sleep... yes checking for select... yes checking for mutex_init... no checking for compare_and_swap... no checking for pthread_mutexattr_init... yes checking for pthread_mutexattr_setpshared... yes checking how to run the C preprocessor... gcc -E checking for pthread.h... yes checking for sched.h... yes configure: creating ./config.status config.status: creating Makefile config.status: creating mpid_locksconf.h config.status: mpid_locksconf.h is unchanged Configuring with args --prefix=NONE 2 build_alias= 2 host_alias= 2 target_alias= 2 checking for architecture... LINUX ROMIO home directory is /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpi/romio checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for 2-g77... g77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether g77 accepts -g... yes checking how to run the C preprocessor... gcc -E checking for memalign... yes checking Fortran external names Fortran externals are lower case and have two trailing underscores checking for inline... inline checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking size of int... 4 checking size of void *... 8 checking for int large enough for pointers... no checking size of long long... 8 checking for f90... no checking for xlf90... no checking for pgf90... no checking for ifort... no checking for epcf90... no checking for f95... no checking for fort... no checking for xlf95... no checking for lf95... no checking for pathf90... no checking for g95... no checking for fc... no checking for ifc... no checking for efc... no checking for extension for Fortran 90 programs... unknown! checking for Fortran 90 KIND parameter for 8-byte integers... unavailable checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes Overriding Array test for MPICH2 checking for weak symbol support... pragma weak checking that weak symbols are visible to other files... yes checking that the compiler correctly implements weak symbols... yes checking whether struct flock compatible with MPI_Offset... yes checking for pvfs2-config... notfound checking configured file systems... testfs ufs nfs checking for library containing aio_write... -lrt checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking if aio.h exists and can be compiled... yes checking if sys/aio.h exists and can be compiled... no checking whether aio routines can be used... yes checking for obsolete two-argument aio_write... no checking for obsolete two-argument aio_suspend... no checking for aio_fildes member of aiocb structure... yes checking for aio_whence member of aiocb structure... no checking for aio_handle member of aiocb structure... no checking for aio_reqprio member of aiocb structure... yes checking for aio_sigevent member of aiocb structure... yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking whether struct statfs properly defined... yes checking for f_fstypename member of statfs structure... no checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for stat... yes checking for st_fstype member of stat structure... no checking for sys/types.h... (cached) yes checking for sys/statvfs.h... (cached) yes checking for sys/vfs.h... (cached) yes checking for statvfs... yes checking for f_basetype member of statvfs structure... no checking for unistd.h... (cached) yes checking for large file defines... yes checking whether off64_t is an scalar type... yes checking for strerror... yes checking for doctext... false checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for lstat... yes checking whether lstat needs a declaration... yes checking for readlink... yes checking whether readlink needs a declaration... no checking for fsync... yes checking whether fsync needs a declaration... no checking for ftruncate... yes checking whether ftruncate needs a declaration... no checking for unistd.h... (cached) yes checking for large file defines... yes setting SYSDEP_INC to checking for restrict... __restrict checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes setting CC to gcc setting F77 to g77 setting TEST_CC to /scratch/jm70674a/FORTE/tmpbuild/bin/mpicc setting TEST_F77 to /scratch/jm70674a/FORTE/tmpbuild/bin/mpif77 setting CFLAGS to -O2 -DFORTRANDOUBLEUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 setting USER_CFLAGS to setting USER_FFLAGS to configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpi-io/Makefile config.status: creating mpi2-other/info/Makefile config.status: creating mpi2-other/array/Makefile config.status: creating adio/common/Makefile config.status: creating test/Makefile config.status: creating test/misc.c config.status: creating test/large_file.c config.status: creating test/runtests config.status: creating util/romioinstall config.status: creating include/mpio.h config.status: creating include/mpiof.h config.status: creating adio/ad_nfs/Makefile config.status: creating adio/ad_ufs/Makefile config.status: creating adio/ad_bgl/Makefile config.status: creating adio/ad_bglockless/Makefile config.status: creating adio/ad_panfs/Makefile config.status: creating adio/ad_xfs/Makefile config.status: creating adio/ad_sfs/Makefile config.status: creating adio/ad_pfs/Makefile config.status: creating adio/ad_testfs/Makefile config.status: creating adio/ad_pvfs/Makefile config.status: creating adio/ad_pvfs2/Makefile config.status: creating adio/ad_gridftp/Makefile config.status: creating adio/ad_lustre/Makefile config.status: creating mpi-io/fortran/Makefile config.status: creating mpi2-other/info/fortran/Makefile config.status: creating mpi2-other/array/fortran/Makefile config.status: creating test/fmisc.f config.status: creating test/fcoll_test.f config.status: creating test/pfcoll_test.f config.status: creating test/fperf.f config.status: creating mpi-io/glue/mpich2/Makefile config.status: creating mpi-io/glue/mpich1/Makefile config.status: creating mpi-io/glue/default/Makefile config.status: creating common/dataloop/Makefile config.status: creating adio/include/romioconf.h config.status: executing default-1 commands RUNNING CONFIGURE FOR THE SIMPLE PMI checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for unistd.h... yes checking for string.h... yes checking for stdlib.h... yes checking for sys/socket.h... yes checking for strings.h... yes checking for assert.h... yes checking for snprintf... yes checking whether snprintf needs a declaration... no checking for sys/types.h... yes checking for sys/param.h... yes checking for sys/socket.h... (cached) yes checking for netinet/in.h... yes checking for netinet/tcp.h... yes checking for sys/un.h... yes checking for netdb.h... yes checking for library containing socket... none required checking for library containing gethostbyname... none required checking for socket... yes checking for setsockopt... yes checking for gethostbyname... yes checking whether socklen_t is defined (in sys/socket.h if present)... yes checking whether struct hostent contains h_addr_list... yes checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating pmiconf.h config.status: pmiconf.h is unchanged Configuring with args /usr/local/share/config.site /usr/local/etc/config.site checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether make sets $(MAKE)... yes checking whether ln -s works... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether install /usr/bin/install -c works... yes Using INSTALL=/usr/bin/install -c checking for totalview... no checking for python2.5... no checking for python2.4... no checking for python2.3... python2.3 checking for python2.2... no checking for python2... python2 checking for python... python checking that python2.3 is a valid python version... yes checking that the cPickle module is available for python2.3... yes checking for library containing socket... none required checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/wait.h that is POSIX.1 compatible... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for strings.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for stdlib.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for putenv... yes checking for socket... yes checking for snprintf... yes checking whether snprintf needs a declaration... no configure: creating ./config.status config.status: creating Makefile config.status: creating mpdconf.h Configuring MPE Profiling System with '--prefix=NONE' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'MPI_CC=/scratch/jm70674a/FORTE/tmpbuild/bin/mpicc' 'MPI_F77=/scratch/jm70674a/FORTE/tmpbuild/bin/mpif77' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread -lrt ' 'F77=g77' 'FFLAGS= -O2' checking gnumake... yes using --no-print-directory checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH This MPE build is part of the MPICH2 build checking for 2-gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether MPI_CC has been set ... /scratch/jm70674a/FORTE/tmpbuild/bin/mpicc checking for 2-g77... g77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether g77 accepts -g... yes checking whether MPI_F77 has been set ... /scratch/jm70674a/FORTE/tmpbuild/bin/mpif77 checking how to get verbose linking output from g77... -v checking for Fortran 77 libraries of g77... -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lpthread -lrt -lfrtbegin -lg2c -lm checking whether g77 accepts the FLIBS found by autoconf... yes checking whether C can link with -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lpthread -lrt -lfrtbegin -lg2c -lm... yes checking for linker for Fortran main programs... Use Fortran to link programs checking for Fortran 77 name mangling... lower doubleunderscore checking what libraries are needed to link Fortran programs with C routines that use stdio... none checking for Fortran 77 flag for library directories... -L checking for include directory flag for Fortran... -I checking how to run the C preprocessor... gcc -E checking whether ln -s works... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for 2-ranlib... ranlib checking whether install breaks libraries... no checking for leftover Makefiles in subpackages ... none configure: creating ./config.status config.status: creating Makefile config.status: creating sbin/mpetestlink config.status: creating sbin/mpetestexec config.status: creating sbin/mpetestexeclog config.status: creating sbin/mpeinstall config.status: creating sbin/mpecheckinstall config.status: creating sbin/mpecheckbuild config.status: creating etc/mpe_help.conf config.status: creating etc/mpe_f77env.conf config.status: creating mpe_conf.h config.status: mpe_conf.h is unchanged config.status: executing default-1 commands === configuring in src/misc (/scratch/jm70674a/FORTE/tmpbuild/src/mpe2/src/misc) configure: running /bin/sh /scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpe2/src/misc/configure --disable-option-checking '--prefix=/usr/local' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'MPI_CC=/scratch/jm70674a/FORTE/tmpbuild/bin/mpicc' 'MPI_F77=/scratch/jm70674a/FORTE/tmpbuild/bin/mpif77' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread -lrt ' 'F77=g77' 'FFLAGS= -O2' --cache-file=/dev/null --srcdir=/scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpe2/src/misc Configuring MPE Miscellaneous Library with '--disable-option-checking' '--prefix=/usr/local' ' 2' 'build_alias= 2' 'host_alias= 2' 'target_alias= 2' 'MPI_CC=/scratch/jm70674a/FORTE/tmpbuild/bin/mpicc' 'MPI_F77=/scratch/jm70674a/FORTE/tmpbuild/bin/mpif77' 'CC=gcc' 'CFLAGS= -O2' 'LIBS=-lpthread -lrt ' 'F77=g77' 'FFLAGS= -O2' '--cache-file=/dev/null' '--srcdir=/scratch/jm70674a/FORTE/mpich2-1.0.8p1/src/mpe2/src/misc' checking gnumake... yes using --no-print-directory checking BSD 4.4 make... no - whew checking OSF V3 make... no checking for virtual path format... VPATH checking build system type...