This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by MOAB configure 4.9.2pre, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --with-mpi=/usr/local CC=/usr/local/bin/mpicc CXX=/usr/local/bin/mpic++ FC=/usr/local/bin/mpif90 F77=/usr/local/bin/mpif77 --download-metis --download-hdf5 --download-netcdf --enable-docs --with-doxygen=/Applications/Doxygen.app/Contents/Resources/ ## --------- ## ## Platform. ## ## --------- ## hostname = dyn-160-39-11-172.dyn.columbia.edu uname -m = x86_64 uname -r = 15.4.0 uname -s = Darwin uname -v = Darwin Kernel Version 15.4.0: Fri Feb 26 22:08:05 PST 2016; root:xnu-3248.40.184~3/RELEASE_X86_64 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 15.4.0: Fri Feb 26 22:08:05 PST 2016; root:xnu-3248.40.184~3/RELEASE_X86_64 Kernel configured for up to 4 processors. 2 processors are physically available. 4 processors are logically available. Processor type: x86_64h (Intel x86-64h Haswell) Processors active: 0 1 2 3 Primary memory available: 8.00 gigabytes Default processor set: 311 tasks, 2093 threads, 4 processors Load average: 1.96, Mach factor: 2.12 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/sbin PATH: /sbin PATH: /opt/X11/bin PATH: /usr/local/git/bin PATH: /Library/TeX/texbin PATH: /Applications/Doxygen.app/Contents/Resources/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:3324: checking build system type configure:3338: result: x86_64-apple-darwin15.4.0 configure:3358: checking host system type configure:3371: result: x86_64-apple-darwin15.4.0 configure:3391: checking target system type configure:3404: result: x86_64-apple-darwin15.4.0 configure:3447: checking for a BSD-compatible install configure:3515: result: /usr/bin/install -c configure:3526: checking whether build environment is sane configure:3581: result: yes configure:3732: checking for a thread-safe mkdir -p configure:3771: result: config/install-sh -c -d configure:3778: checking for gawk configure:3808: result: no configure:3778: checking for mawk configure:3808: result: no configure:3778: checking for nawk configure:3808: result: no configure:3778: checking for awk configure:3794: found /usr/bin/awk configure:3805: result: awk configure:3816: checking whether make sets $(MAKE) configure:3838: result: yes configure:3867: checking whether make supports nested variables configure:3884: result: yes configure:4021: checking whether make supports nested variables configure:4038: result: yes configure:4052: checking for sed configure:4068: found /usr/bin/sed configure:4080: result: sed configure:4102: checking for readlink configure:4118: found /usr/bin/readlink configure:4130: result: yes configure:4140: checking for dirname configure:4156: found /usr/bin/dirname configure:4168: result: yes configure:4178: checking for basename configure:4194: found /usr/bin/basename configure:4206: result: yes configure:4216: checking for rsync configure:4232: found /usr/bin/rsync configure:4244: result: yes configure:4255: checking for wget configure:4283: result: no configure:4293: checking for scp configure:4309: found /usr/bin/scp configure:4321: result: yes configure:4331: checking for curl configure:4347: found /usr/bin/curl configure:4359: result: yes configure:4370: checking for tar configure:4386: found /usr/bin/tar configure:4398: result: yes configure:4408: checking for unzip configure:4424: found /usr/bin/unzip configure:4436: result: yes configure:4446: checking for bzip2 configure:4462: found /usr/bin/bzip2 configure:4474: result: yes configure:4485: checking for md5sum configure:4513: result: no configure:4567: checking for shasum configure:4583: found /usr/bin/shasum configure:4595: result: yes configure:4606: checking for shasum configure:4624: found /usr/bin/shasum configure:4637: result: /usr/bin/shasum configure:4651: checking whether ln -s works configure:4655: result: yes configure:4664: checking for mkdir configure:4682: found /bin/mkdir configure:4695: result: /bin/mkdir configure:4709: checking whether make sets $(MAKE) configure:4731: result: yes configure:4789: checking for style of include used by make configure:4817: result: GNU configure:5075: checking for gcc configure:5102: result: /usr/local/bin/mpicc configure:5331: checking for C compiler version configure:5340: /usr/local/bin/mpicc --version >&5 Apple LLVM version 7.0.2 (clang-700.1.81) Target: x86_64-apple-darwin15.4.0 Thread model: posix Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 configure:5351: $? = 0 configure:5340: /usr/local/bin/mpicc -v >&5 Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 Apple LLVM version 7.0.2 (clang-700.1.81) Target: x86_64-apple-darwin15.4.0 Thread model: posix configure:5351: $? = 0 configure:5340: /usr/local/bin/mpicc -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:5351: $? = 1 configure:5340: /usr/local/bin/mpicc -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:5351: $? = 1 configure:5371: checking whether the C compiler works configure:5393: /usr/local/bin/mpicc conftest.c >&5 configure:5397: $? = 0 configure:5445: result: yes configure:5448: checking for C compiler default output file name configure:5450: result: a.out configure:5456: checking for suffix of executables configure:5463: /usr/local/bin/mpicc -o conftest conftest.c >&5 configure:5467: $? = 0 configure:5489: result: configure:5511: checking whether we are cross compiling configure:5519: /usr/local/bin/mpicc -o conftest conftest.c >&5 configure:5523: $? = 0 configure:5530: ./conftest configure:5534: $? = 0 configure:5549: result: no configure:5554: checking for suffix of object files configure:5576: /usr/local/bin/mpicc -c conftest.c >&5 configure:5580: $? = 0 configure:5601: result: o configure:5605: checking whether we are using the GNU C compiler configure:5624: /usr/local/bin/mpicc -c conftest.c >&5 configure:5624: $? = 0 configure:5633: result: yes configure:5642: checking whether /usr/local/bin/mpicc accepts -g configure:5662: /usr/local/bin/mpicc -c -g conftest.c >&5 configure:5662: $? = 0 configure:5703: result: yes configure:5720: checking for /usr/local/bin/mpicc option to accept ISO C89 configure:5783: /usr/local/bin/mpicc -c -g -O2 conftest.c >&5 configure:5783: $? = 0 configure:5796: result: none needed configure:5821: checking whether /usr/local/bin/mpicc understands -c and -o together configure:5843: /usr/local/bin/mpicc -c conftest.c -o conftest2.o configure:5846: $? = 0 configure:5843: /usr/local/bin/mpicc -c conftest.c -o conftest2.o configure:5846: $? = 0 configure:5858: result: yes configure:5877: checking dependency style of /usr/local/bin/mpicc configure:5988: result: gcc3 configure:6008: checking how to run the C preprocessor configure:6039: /usr/local/bin/mpicc -E conftest.c configure:6039: $? = 0 configure:6053: /usr/local/bin/mpicc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:6053: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #include configure:6078: result: /usr/local/bin/mpicc -E configure:6098: /usr/local/bin/mpicc -E conftest.c configure:6098: $? = 0 configure:6112: /usr/local/bin/mpicc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:6112: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #include configure:6254: checking for C++ compiler version configure:6263: /usr/local/bin/mpic++ --version >&5 Apple LLVM version 7.0.2 (clang-700.1.81) Target: x86_64-apple-darwin15.4.0 Thread model: posix Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 configure:6274: $? = 0 configure:6263: /usr/local/bin/mpic++ -v >&5 Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 Apple LLVM version 7.0.2 (clang-700.1.81) Target: x86_64-apple-darwin15.4.0 Thread model: posix configure:6274: $? = 0 configure:6263: /usr/local/bin/mpic++ -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:6274: $? = 1 configure:6263: /usr/local/bin/mpic++ -qversion >&5 clang: error: unknown argument: '-qversion' clang: error: no input files configure:6274: $? = 1 configure:6278: checking whether we are using the GNU C++ compiler configure:6297: /usr/local/bin/mpic++ -c conftest.cpp >&5 configure:6297: $? = 0 configure:6306: result: yes configure:6315: checking whether /usr/local/bin/mpic++ accepts -g configure:6335: /usr/local/bin/mpic++ -c -g conftest.cpp >&5 configure:6335: $? = 0 configure:6376: result: yes configure:6401: checking dependency style of /usr/local/bin/mpic++ configure:6512: result: gcc3 configure:6532: checking how to run the C++ preprocessor configure:6559: /usr/local/bin/mpic++ -E conftest.cpp configure:6559: $? = 0 configure:6573: /usr/local/bin/mpic++ -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:6573: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #include configure:6598: result: /usr/local/bin/mpic++ -E configure:6618: /usr/local/bin/mpic++ -E conftest.cpp configure:6618: $? = 0 configure:6632: /usr/local/bin/mpic++ -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:6632: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #include configure:6895: checking for Fortran compiler version configure:6904: /usr/local/bin/mpif90 --version >&5 GNU Fortran (GCC) 5.1.0 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:6915: $? = 0 configure:6904: /usr/local/bin/mpif90 -v >&5 Using built-in specs. COLLECT_GCC=/usr/local/bin/gfortran COLLECT_LTO_WRAPPER=/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/lto-wrapper Target: x86_64-apple-darwin14 Configured with: ../gcc-5.1.0/configure --prefix=/usr/local/gfortran --with-gmp=/Users/fx/devel/gcc/deps-static/x86_64 --enable-languages=c,c++,fortran,objc,obj-c++ --build=x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) configure:6915: $? = 0 configure:6904: /usr/local/bin/mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6915: $? = 1 configure:6904: /usr/local/bin/mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:6915: $? = 1 configure:6924: checking whether we are using the GNU Fortran compiler configure:6937: /usr/local/bin/mpif90 -c conftest.F >&5 configure:6937: $? = 0 configure:6946: result: yes configure:6952: checking whether /usr/local/bin/mpif90 accepts -g configure:6963: /usr/local/bin/mpif90 -c -g conftest.f >&5 configure:6963: $? = 0 configure:6971: result: yes configure:7106: checking for Fortran 77 compiler version configure:7115: /usr/local/bin/mpif77 --version >&5 GNU Fortran (GCC) 5.1.0 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:7126: $? = 0 configure:7115: /usr/local/bin/mpif77 -v >&5 Using built-in specs. COLLECT_GCC=/usr/local/bin/gfortran COLLECT_LTO_WRAPPER=/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/lto-wrapper Target: x86_64-apple-darwin14 Configured with: ../gcc-5.1.0/configure --prefix=/usr/local/gfortran --with-gmp=/Users/fx/devel/gcc/deps-static/x86_64 --enable-languages=c,c++,fortran,objc,obj-c++ --build=x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) configure:7126: $? = 0 configure:7115: /usr/local/bin/mpif77 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:7126: $? = 1 configure:7115: /usr/local/bin/mpif77 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:7126: $? = 1 configure:7135: checking whether we are using the GNU Fortran 77 compiler configure:7148: /usr/local/bin/mpif77 -c conftest.F >&5 configure:7148: $? = 0 configure:7157: result: yes configure:7163: checking whether /usr/local/bin/mpif77 accepts -g configure:7174: /usr/local/bin/mpif77 -c -g conftest.f >&5 configure:7174: $? = 0 configure:7182: result: yes configure:7241: checking how to get verbose linking output from /usr/local/bin/mpif77 configure:7251: /usr/local/bin/mpif77 -c -g -O2 conftest.f >&5 configure:7251: $? = 0 configure:7269: /usr/local/bin/mpif77 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/f951 conftest.f -ffixed-form -I /usr/local/include -I /usr/local/lib -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.11.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/finclude -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccQiiUI0.s GNU Fortran (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cc5mkYyS.o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccQiiUI0.s Reading specs from /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cc5mkYyS.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 5.1.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cc5mkYyS.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-253.9 configured to support archs: armv6 armv7 armv7s arm64 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em (tvOS) Library search paths: /usr/local/lib /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 /usr/local/gfortran/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ dsymutil conftest configure:7352: result: -v configure:7354: checking for Fortran 77 libraries of /usr/local/bin/mpif77 configure:7377: /usr/local/bin/mpif77 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/f951 conftest.f -ffixed-form -I /usr/local/include -I /usr/local/lib -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.11.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/finclude -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccSHtlLH.s GNU Fortran (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccUflF7G.o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccSHtlLH.s Reading specs from /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccUflF7G.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 5.1.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccUflF7G.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-253.9 configured to support archs: armv6 armv7 armv7s arm64 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em (tvOS) Library search paths: /usr/local/lib /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 /usr/local/gfortran/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ dsymutil conftest configure:7573: result: -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm configure:7588: checking how to get verbose linking output from /usr/local/bin/mpif90 configure:7598: /usr/local/bin/mpif90 -c -g -O2 conftest.f >&5 configure:7598: $? = 0 configure:7616: /usr/local/bin/mpif90 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/f951 conftest.f -ffixed-form -I /usr/local/include -I /usr/local/lib -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.11.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/finclude -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccuLTkUM.s GNU Fortran (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccI39wIO.o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccuLTkUM.s Reading specs from /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccI39wIO.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 5.1.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//ccI39wIO.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-253.9 configured to support archs: armv6 armv7 armv7s arm64 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em (tvOS) Library search paths: /usr/local/lib /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 /usr/local/gfortran/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ dsymutil conftest configure:7699: result: -v configure:7701: checking for Fortran libraries of /usr/local/bin/mpif90 configure:7724: /usr/local/bin/mpif90 -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-apple-darwin14 Thread model: posix gcc version 5.1.0 (GCC) /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/f951 conftest.f -ffixed-form -I /usr/local/include -I /usr/local/lib -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.11.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/finclude -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cc373ob3.s GNU Fortran (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 5.1.0 (x86_64-apple-darwin14) compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cceaxrNI.o /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cc373ob3.s Reading specs from /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../../libgfortran.spec rename spec lib to liborig /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin14/5.1.0/collect2 -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cceaxrNI.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym collect2 version 5.1.0 /usr/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.11.4 -weak_reference_mismatches non-weak -o conftest -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. /var/folders/l0/vp_q6k2d5337dkr2crmqw44r0000gn/T//cceaxrNI.o -flat_namespace -commons use_dylibs -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v @(#)PROGRAM:ld PROJECT:ld64-253.9 configured to support archs: armv6 armv7 armv7s arm64 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em (tvOS) Library search paths: /usr/local/lib /usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 /usr/local/gfortran/lib /usr/lib /usr/local/lib Framework search paths: /Library/Frameworks/ /System/Library/Frameworks/ dsymutil conftest configure:7920: result: -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm configure:8011: checking for known C compilers configure:8032: /usr/local/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c:13:4: error: unknown type name 'choke' choke me ^ conftest.c:13:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:8032: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:8052: /usr/local/bin/mpicc -c -g -O2 conftest.c >&5 configure:8052: $? = 0 configure:8446: result: Clang configure:8454: checking for known compiler/OS combinations configure:8544: result: Clang:x86_64 configure:8560: checking for known c++ compilers configure:8581: /usr/local/bin/mpic++ -c -g -O2 conftest.cpp >&5 conftest.cpp:13:4: error: unknown type name 'choke' choke me ^ conftest.cpp:13:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:8581: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:8601: /usr/local/bin/mpic++ -c -g -O2 conftest.cpp >&5 configure:8601: $? = 0 configure:9018: result: Clang configure:9026: checking for known compiler/CPU/OS combinations configure:9094: result: Clang:darwin15.4.0:x86_64 configure:9177: checking for Fortran flag to compile preprocessed .F files configure:9202: /usr/local/bin/mpif90 -c -O2 conftest.F >&5 configure:9202: $? = 0 configure:9212: /usr/local/bin/mpif90 -c -O2 conftest.F >&5 conftest.F:4:0: #include ^ Fatal Error: ac_nonexistent.h: No such file or directory compilation terminated. configure:9212: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:9225: result: none configure:9246: checking how to define symbols for preprocessed Fortran configure:9268: /usr/local/bin/mpif90 -c -O2 -DFOOBAR -DZORK=42 conftest.F >&5 configure:9268: $? = 0 configure:9277: result: -D configure:9297: checking for Fortran flag to compile preprocessed . files configure:9322: /usr/local/bin/mpif90 -c -O2 conftest. >&5 gfortran: warning: conftest.: linker input file unused because linking not done configure:9322: $? = 0 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -ftpp conftest. >&5 gfortran: error: unrecognized command line option '-ftpp' configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -fpp conftest. >&5 gfortran: error: unrecognized command line option '-fpp' configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -Tf conftest. >&5 gfortran: warning: conftest.: linker input file unused because linking not done configure:9322: $? = 0 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -fpp -Tf conftest. >&5 gfortran: error: unrecognized command line option '-fpp' configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -xpp=fpp conftest. >&5 gfortran: error: language pp=fpp not recognized gfortran: error: language pp=fpp not recognized configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -Mpreprocess conftest. >&5 gfortran: error: unrecognized command line option '-Mpreprocess' configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -e Z conftest. >&5 gfortran: warning: conftest.: linker input file unused because linking not done configure:9322: $? = 0 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -cpp conftest. >&5 gfortran: warning: conftest.: linker input file unused because linking not done configure:9322: $? = 0 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -xpp=cpp conftest. >&5 gfortran: error: language pp=cpp not recognized gfortran: error: language pp=cpp not recognized configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -qsuffix=cpp= conftest. >&5 gfortran: error: unrecognized command line option '-qsuffix=cpp=' configure:9322: $? = 1 configure: failed program was: | program main | | #if 0 | #include | choke me | #endif | end configure:9322: /usr/local/bin/mpif90 -c -O2 -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:9322: $? = 0 configure:9332: /usr/local/bin/mpif90 -c -O2 -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form conftest.:4:0: #include ^ Fatal Error: ac_nonexistent.h: No such file or directory compilation terminated. configure:9332: $? = 1 configure: failed program was: | program main | | #if 1 | #include | choke me | #endif | end configure:9345: result: -x f95-cpp-input configure:9430: checking if platform is IBM BlueGene configure:9447: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:13:4: error: unknown type name 'choke' choke me ^ conftest.c:13:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:9447: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | | #ifndef __bg__ | choke me | #endif | int | main () | { | | ; | return 0; | } configure:9455: result: no configure:9471: checking for alternate main to link with Fortran 77 libraries configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main MAIN__ | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main MAIN_ | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: ___main) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main __main | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main MAIN | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main _MAIN | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main __MAIN | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: _main_) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main main_ | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: _main__) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main main__ | int | main () | { | | ; | return 0; | } configure:9503: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: __main) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9503: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef F77_DUMMY_MAIN | #endif | #define main _main | int | main () | { | | ; | return 0; | } configure:9518: result: main configure:9536: checking for alternate main to link with Fortran libraries configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main MAIN__ | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main MAIN_ | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: ___main) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main __main | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main MAIN | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main _MAIN | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main __MAIN | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: _main_) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main main_ | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: _main__) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main main__ | int | main () | { | | ; | return 0; | } configure:9568: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable (maybe you meant: __main) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9568: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | /* end confdefs.h. */ | #ifdef FC_DUMMY_MAIN_EQ_F77 | # undef F77_DUMMY_MAIN | # undef FC_DUMMY_MAIN | #else | # undef FC_DUMMY_MAIN | #endif | #define main _main | int | main () | { | | ; | return 0; | } configure:9583: result: main configure:9603: checking for Fortran name-mangling scheme configure:9616: /usr/local/bin/mpif90 -c -O2 -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:9616: $? = 0 configure:9649: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c cfortran_test.o -lc++ -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm >&5 Undefined symbols for architecture x86_64: "_foobar", referenced from: _main in conftest-7a44dd.o (maybe you meant: _foobar_) ld: symbol(s) not found for architecture x86_64 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:9649: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | int | main () | { | return foobar (); | ; | return 0; | } configure:9649: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c cfortran_test.o -lc++ -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm >&5 configure:9649: $? = 0 configure:9699: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c cfortran_test.o -lc++ -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm >&5 configure:9699: $? = 0 configure:9740: result: lower case, underscore, no extra underscore configure:9843: checking whether /usr/local/bin/mpif90 supports -stdlib=libc++ configure:9856: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -lc++ conftest.c -lc++ >&5 configure:9856: $? = 0 configure:9857: result: yes configure:9912: checking whether ln -s works configure:9916: result: yes configure:9923: checking whether make sets $(MAKE) configure:9945: result: yes configure:10035: checking how to print strings configure:10062: result: printf configure:10083: checking for a sed that does not truncate output configure:10147: result: sed configure:10165: checking for grep that handles long lines and -e configure:10223: result: /usr/bin/grep configure:10228: checking for egrep configure:10290: result: /usr/bin/grep -E configure:10295: checking for fgrep configure:10357: result: /usr/bin/grep -F configure:10392: checking for ld used by /usr/local/bin/mpicc configure:10459: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:10466: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:10481: result: no configure:10493: checking for BSD- or MS-compatible name lister (nm) configure:10547: result: /usr/bin/nm configure:10677: checking the name lister (/usr/bin/nm) interface configure:10684: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:10687: /usr/bin/nm "conftest.o" configure:10690: output 0000000000000000 S _some_variable configure:10697: result: BSD nm configure:10701: checking the maximum length of command line arguments configure:10832: result: 196608 configure:10880: checking how to convert x86_64-apple-darwin15.4.0 file names to x86_64-apple-darwin15.4.0 format configure:10920: result: func_convert_file_noop configure:10927: checking how to convert x86_64-apple-darwin15.4.0 file names to toolchain format configure:10947: result: func_convert_file_noop configure:10954: checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files configure:10961: result: -r configure:11035: checking for objdump configure:11065: result: no configure:11094: checking how to recognize dependent libraries configure:11294: result: pass_all configure:11379: checking for dlltool configure:11409: result: no configure:11439: checking how to associate runtime and link libraries configure:11466: result: printf %s\n configure:11526: checking for ar configure:11542: found /usr/bin/ar configure:11553: result: ar configure:11590: checking for archiver @FILE support configure:11607: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:11607: $? = 0 configure:11610: ar cru libconftest.a @conftest.lst >&5 ar: @conftest.lst: No such file or directory configure:11613: $? = 1 configure:11633: result: no configure:11691: checking for strip configure:11707: found /usr/bin/strip configure:11718: result: strip configure:11790: checking for ranlib configure:11806: found /usr/bin/ranlib configure:11817: result: ranlib configure:11919: checking command to parse /usr/bin/nm output from /usr/local/bin/mpicc object configure:12072: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:12075: $? = 0 configure:12079: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:12082: $? = 0 cannot find nm_test_var in conftest.nm configure:12072: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:12075: $? = 0 configure:12079: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:12082: $? = 0 configure:12148: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c conftstm.o >&5 configure:12151: $? = 0 configure:12189: result: ok configure:12236: checking for sysroot configure:12266: result: no configure:12273: checking for a working dd configure:12311: result: /bin/dd configure:12315: checking how to truncate binary pipes configure:12330: result: /bin/dd bs=4096 count=1 configure:12659: checking for mt configure:12689: result: no configure:12709: checking if : is a manifest tool configure:12715: : '-?' configure:12723: result: no configure:12779: checking for dsymutil configure:12795: found /usr/bin/dsymutil configure:12806: result: dsymutil configure:12871: checking for nmedit configure:12887: found /usr/bin/nmedit configure:12898: result: nmedit configure:12963: checking for lipo configure:12979: found /usr/bin/lipo configure:12990: result: lipo configure:13055: checking for otool configure:13071: found /usr/bin/otool configure:13082: result: otool configure:13147: checking for otool64 configure:13177: result: no configure:13222: checking for -single_module linker flag /usr/local/bin/mpicc -O2 -DNDEBUG -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c configure:13255: result: yes configure:13258: checking for -exported_symbols_list linker flag configure:13278: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -Wl,-exported_symbols_list,conftest.sym conftest.c -lc++ >&5 configure:13278: $? = 0 configure:13288: result: yes configure:13291: checking for -force_load linker flag /usr/local/bin/mpicc -O2 -DNDEBUG -c -o conftest.o conftest.c ar cru libconftest.a conftest.o ranlib libconftest.a /usr/local/bin/mpicc -O2 -DNDEBUG -o conftest conftest.c -Wl,-force_load,./libconftest.a configure:13323: result: yes configure:13396: checking for ANSI C header files configure:13416: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13416: $? = 0 configure:13489: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 configure:13489: $? = 0 configure:13489: ./conftest configure:13489: $? = 0 configure:13500: result: yes configure:13513: checking for sys/types.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for sys/stat.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for stdlib.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for string.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for memory.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for strings.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for inttypes.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for stdint.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13513: checking for unistd.h configure:13513: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13513: $? = 0 configure:13513: result: yes configure:13527: checking for dlfcn.h configure:13527: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:13527: $? = 0 configure:13527: result: yes configure:13762: checking for objdir configure:13777: result: .libs configure:14041: checking if /usr/local/bin/mpicc supports -fno-rtti -fno-exceptions configure:14059: /usr/local/bin/mpicc -c -O2 -DNDEBUG -fno-rtti -fno-exceptions conftest.c >&5 configure:14063: $? = 0 configure:14076: result: yes configure:14434: checking for /usr/local/bin/mpicc option to produce PIC configure:14441: result: -fno-common -DPIC configure:14449: checking if /usr/local/bin/mpicc PIC flag -fno-common -DPIC works configure:14467: /usr/local/bin/mpicc -c -O2 -DNDEBUG -fno-common -DPIC -DPIC conftest.c >&5 configure:14471: $? = 0 configure:14484: result: yes configure:14513: checking if /usr/local/bin/mpicc static flag -static works configure:14541: result: no configure:14556: checking if /usr/local/bin/mpicc supports -c -o file.o configure:14577: /usr/local/bin/mpicc -c -O2 -DNDEBUG -o out/conftest2.o conftest.c >&5 configure:14581: $? = 0 configure:14603: result: yes configure:14611: checking if /usr/local/bin/mpicc supports -c -o file.o configure:14658: result: yes configure:14691: checking whether the /usr/local/bin/mpicc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:15950: result: yes configure:16190: checking dynamic linker characteristics configure:17008: result: darwin15.4.0 dyld configure:17130: checking how to hardcode library paths into programs configure:17155: result: immediate configure:17200: checking for dlopen in -ldl configure:17225: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -ldl -lc++ >&5 configure:17225: $? = 0 configure:17234: result: yes configure:17457: checking whether a program can dlopen itself configure:17537: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -DHAVE_DLFCN_H conftest.c -ldl -lc++ >&5 configure:17540: $? = 0 configure:17558: result: yes configure:17563: checking whether a statically linked program can dlopen itself configure:17643: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -DHAVE_DLFCN_H conftest.c -ldl -lc++ >&5 configure:17646: $? = 0 configure:17664: result: yes configure:17703: checking whether stripping libraries is possible configure:17717: result: yes configure:17743: checking if libtool supports shared libraries configure:17745: result: yes configure:17748: checking whether to build shared libraries configure:17773: result: no configure:17776: checking whether to build static libraries configure:17780: result: yes configure:17803: checking how to run the C++ preprocessor configure:17869: result: /usr/local/bin/mpic++ -E configure:17889: /usr/local/bin/mpic++ -E conftest.cpp configure:17889: $? = 0 configure:17903: /usr/local/bin/mpic++ -E conftest.cpp conftest.cpp:27:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:17903: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:18065: checking for ld used by /usr/local/bin/mpic++ configure:18132: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:18139: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:18154: result: no configure:18209: checking whether the /usr/local/bin/mpic++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:19282: result: yes configure:19318: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:19321: $? = 0 configure:19802: checking for /usr/local/bin/mpic++ option to produce PIC configure:19809: result: -fno-common -DPIC configure:19817: checking if /usr/local/bin/mpic++ PIC flag -fno-common -DPIC works configure:19835: /usr/local/bin/mpic++ -c -O2 -DNDEBUG -fno-common -DPIC -DPIC conftest.cpp >&5 configure:19839: $? = 0 configure:19852: result: yes configure:19875: checking if /usr/local/bin/mpic++ static flag -static works configure:19903: result: no configure:19915: checking if /usr/local/bin/mpic++ supports -c -o file.o configure:19936: /usr/local/bin/mpic++ -c -O2 -DNDEBUG -o out/conftest2.o conftest.cpp >&5 configure:19940: $? = 0 configure:19962: result: yes configure:19967: checking if /usr/local/bin/mpic++ supports -c -o file.o configure:20014: result: yes configure:20044: checking whether the /usr/local/bin/mpic++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:20084: result: yes configure:20225: checking dynamic linker characteristics configure:20970: result: darwin15.4.0 dyld configure:21035: checking how to hardcode library paths into programs configure:21060: result: immediate configure:21201: checking if libtool supports shared libraries configure:21203: result: yes configure:21206: checking whether to build shared libraries configure:21230: result: no configure:21233: checking whether to build static libraries configure:21237: result: yes configure:21589: checking for /usr/local/bin/mpif77 option to produce PIC configure:21596: result: -fno-common configure:21604: checking if /usr/local/bin/mpif77 PIC flag -fno-common works configure:21622: /usr/local/bin/mpif77 -c -O2 -fno-common conftest.f >&5 configure:21626: $? = 0 configure:21639: result: yes configure:21662: checking if /usr/local/bin/mpif77 static flag -static works configure:21690: result: no configure:21702: checking if /usr/local/bin/mpif77 supports -c -o file.o configure:21723: /usr/local/bin/mpif77 -c -O2 -o out/conftest2.o conftest.f >&5 configure:21727: $? = 0 configure:21749: result: yes configure:21754: checking if /usr/local/bin/mpif77 supports -c -o file.o configure:21801: result: yes configure:21831: checking whether the /usr/local/bin/mpif77 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:23040: result: yes configure:23181: checking dynamic linker characteristics configure:23920: result: darwin15.4.0 dyld configure:23985: checking how to hardcode library paths into programs configure:24010: result: immediate configure:24147: checking if libtool supports shared libraries configure:24149: result: yes configure:24152: checking whether to build shared libraries configure:24176: result: no configure:24179: checking whether to build static libraries configure:24183: result: yes configure:24217: /usr/local/bin/mpif90 -c -O2 -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:24220: $? = 0 configure:24680: checking for /usr/local/bin/mpif90 option to produce PIC configure:24687: result: -fno-common configure:24695: checking if /usr/local/bin/mpif90 PIC flag -fno-common works configure:24713: /usr/local/bin/mpif90 -c -O2 -fno-common -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:24717: $? = 0 configure:24730: result: yes configure:24753: checking if /usr/local/bin/mpif90 static flag -static works configure:24781: result: no configure:24793: checking if /usr/local/bin/mpif90 supports -c -o file.o configure:24814: /usr/local/bin/mpif90 -c -O2 -o out/conftest2.o -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:24818: $? = 0 configure:24840: result: yes configure:24845: checking if /usr/local/bin/mpif90 supports -c -o file.o configure:24892: result: yes configure:24922: checking whether the /usr/local/bin/mpif90 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:26131: result: yes configure:26272: checking dynamic linker characteristics configure:27011: result: darwin15.4.0 dyld configure:27076: checking how to hardcode library paths into programs configure:27101: result: immediate configure:27152: checking whether byte ordering is bigendian configure:27167: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:27167: $? = 0 configure:27212: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:27212: $? = 0 configure:27230: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:34:4: error: use of undeclared identifier 'not' not big endian ^ 1 error generated. configure:27230: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:27358: result: no configure:27379: checking for gunzip configure:27395: found /usr/bin/gunzip configure:27406: result: gunzip -c configure:27416: checking for gzip configure:27443: result: gunzip -c configure:27453: checking for zcat configure:27480: result: gunzip -c configure:27503: checking if C++ compiler supports template class specialization configure:27527: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:27527: $? = 0 configure:27540: result: yes configure:27553: checking if C++ compiler supports template function specialization configure:27578: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:27578: $? = 0 configure:27591: result: yes configure:27612: checking if /usr/local/bin/mpic++ works configure:27625: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:27625: $? = 0 configure:27639: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:34:4: error: unknown type name 'choke' choke me ^ 1 error generated. configure:27639: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | /* end confdefs.h. */ | | int | main () | { | #ifdef __cplusplus | choke me | #endif | ; | return 0; | } configure:27643: result: yes configure:27666: checking whether Fortran 77 supports Cray-style pointer configure:27693: /usr/local/bin/mpif77 -c -O2 conftest.f >&5 conftest.f:5:16: pointer (MPTR,M) 1 Error: Cray pointer declaration at (1) requires -fcray-pointer flag configure:27693: $? = 1 configure: failed program was: | | program main | | integer M | pointer (MPTR,M) | data MPTR/0/ | | end | configure:27693: /usr/local/bin/mpif77 -c -O2 -fcray-pointer conftest.f >&5 configure:27693: $? = 0 configure:27712: result: yes configure:27716: checking for Fortran 77 compiler flag for Cray-style pointer configure:27719: result: -fcray-pointer configure:27736: checking whether Fortran 90 supports Cray-style pointer configure:27763: /usr/local/bin/mpif90 -c -O2 -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form conftest.:5:16: pointer (MPTR,M) 1 Error: Cray pointer declaration at (1) requires -fcray-pointer flag configure:27763: $? = 1 configure: failed program was: | | program main | | integer M | pointer (MPTR,M) | data MPTR/0/ | | end | configure:27763: /usr/local/bin/mpif90 -c -O2 -fcray-pointer -x f95-cpp-input conftest. >&5 f951: Warning: Reading file 'conftest.' as free form configure:27763: $? = 0 configure:27783: result: yes configure:27787: checking for Fortran 90 compiler flag for Cray-style pointer configure:27790: result: -fcray-pointer configure:27808: checking for vsnprintf configure:27808: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 conftest.c:52:6: warning: incompatible redeclaration of library function 'vsnprintf' [-Wincompatible-library-redeclaration] char vsnprintf (); ^ conftest.c:52:6: note: 'vsnprintf' is a builtin with type 'int (char *, unsigned long, const char *, __va_list_tag *)' 1 warning generated. configure:27808: $? = 0 configure:27808: result: yes configure:27817: checking if std::vector has templatized insert method configure:27844: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:27844: $? = 0 configure:27857: result: yes configure:27868: checking if std::copy must be old SGI format configure:27891: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:27891: $? = 0 configure:27904: result: no configure:27919: checking for inttypes.h configure:27919: result: yes configure:27927: checking for stdint.h configure:27927: result: yes configure:27935: checking for sys/types.h configure:27935: result: yes configure:27943: checking stddef.h usability configure:27943: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:27943: $? = 0 configure:27943: result: yes configure:27943: checking stddef.h presence configure:27943: /usr/local/bin/mpicc -E conftest.c configure:27943: $? = 0 configure:27943: result: yes configure:27943: checking for stddef.h configure:27943: result: yes configure:27951: checking for stdlib.h configure:27951: result: yes configure:27964: checking size of void * configure:27969: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lc++ >&5 configure:27969: $? = 0 configure:27969: ./conftest configure:27969: $? = 0 configure:27983: result: 8 configure:28029: checking for size_t configure:28029: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:28029: $? = 0 configure:28029: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:72:21: error: expected expression if (sizeof ((size_t))) ^ 1 error generated. configure:28029: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:28029: result: yes configure:28075: checking for ptrdiff_t configure:28075: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:28075: $? = 0 configure:28075: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:73:24: error: expected expression if (sizeof ((ptrdiff_t))) ^ 1 error generated. configure:28075: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:28075: result: yes configure:28165: checking for compress in -lz configure:28190: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lz -lc++ >&5 configure:28190: $? = 0 configure:28199: result: yes configure:28205: checking for dlopen in -ldl configure:28239: result: yes configure:28245: checking for pow in -lm configure:28270: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lm -lc++ -lz -ldl >&5 conftest.c:45:6: warning: incompatible redeclaration of library function 'pow' [-Wincompatible-library-redeclaration] char pow (); ^ conftest.c:45:6: note: 'pow' is a builtin with type 'double (double, double)' 1 warning generated. configure:28270: $? = 0 configure:28279: result: yes configure:28335: checking size of EntityHandle configure:28337: result: 8 configure:28348: checking if FBiGeom support is to be built configure:28350: result: no configure:28370: checking if iMesh support is to be built configure:28372: result: yes configure:28458: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:780: creating libtool configure:30519: checking ieeefp.h usability configure:30519: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:77:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:30519: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:30519: result: no configure:30519: checking ieeefp.h presence configure:30519: /usr/local/bin/mpicc -E conftest.c conftest.c:44:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:30519: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | /* end confdefs.h. */ | #include configure:30519: result: no configure:30519: checking for ieeefp.h configure:30519: result: no configure:30543: checking for std::isfinite configure:30566: /usr/local/bin/mpic++ -o conftest -O2 -DNDEBUG conftest.cpp -lc++ -lz -ldl -lm -lm >&5 configure:30566: $? = 0 configure:30580: result: yes configure:30594: checking for isfinite configure:30617: /usr/local/bin/mpic++ -o conftest -O2 -DNDEBUG conftest.cpp -lc++ -lz -ldl -lm -lm -lm >&5 configure:30617: $? = 0 configure:30631: result: yes configure:30645: checking for finite configure:30668: /usr/local/bin/mpic++ -o conftest -O2 -DNDEBUG conftest.cpp -lc++ -lz -ldl -lm -lm -lm -lm >&5 conftest.cpp:50:10: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] bool f = finite( 3 ); ^ /usr/include/math.h:757:12: note: 'finite' has been explicitly marked deprecated here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ 1 warning generated. configure:30668: $? = 0 configure:30682: result: yes configure:30724: checking for C++ unordered_map configure:30747: /usr/local/bin/mpic++ -c -O2 -DNDEBUG conftest.cpp >&5 configure:30747: $? = 0 configure:30792: result: std configure:30830: checking mpi.h usability configure:30830: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 configure:30830: $? = 0 configure:30830: result: yes configure:30830: checking mpi.h presence configure:30830: /usr/local/bin/mpicc -E conftest.c configure:30830: $? = 0 configure:30830: result: yes configure:30830: checking for mpi.h configure:30830: result: yes configure:30845: checking If mpi.h conflicts with C headers in C++ configure:30865: /usr/local/bin/mpic++ -E conftest.cpp configure:30865: $? = 0 configure:30866: result: no configure:31176: checking for mpiexec configure:31192: found /usr/local/bin/mpiexec configure:31203: result: mpiexec configure:31268: checking for known MPI family and version configure:31287: result: OPENMPI-3 configure:31461: checking for deflate in -lz configure:31486: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lz -lc++ -lz -ldl -lm -lm -lm -lm >&5 configure:31486: $? = 0 configure:31495: result: yes configure:31532: checking for SZ_Decompress in -lsz configure:31557: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lsz -lc++ -lz -ldl -lm -lm -lm -lm >&5 ld: library not found for -lsz clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31557: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Decompress (); | int | main () | { | return SZ_Decompress (); | ; | return 0; | } configure:31566: result: no configure:31602: checking if HDF5 support is enabled configure:31620: result: no configure:31687: *** ================================================================================================================== *** configure:31692: [ HDF5 ] -- Downloading sources from URL: http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.12/src/hdf5-1.8.12.tar.gz configure:31733: [ HDF5 ] -- CURL: HDF5 package downloading to /Users/wujie/SourceCode/moab/sandbox/archives/hdf5-1.8.12.tar.gz configure:31752: configure:31766: [ HDF5 ] -- Deflating archive (/Users/wujie/SourceCode/moab/sandbox/archives/hdf5-1.8.12.tar.gz => /Users/wujie/SourceCode/moab/sandbox/hdf5) configure:31775: [ HDF5 ] -- Untar file: /Users/wujie/SourceCode/moab/sandbox/archives/hdf5-1.8.12.tar.gz configure:31777: [ HDF5 ] -- Source dir: /Users/wujie/SourceCode/moab/sandbox/hdf5 configure:31806: configure:31890: [ HDF5 ] -- Configuring with default options {debug=no production=yes shared=no parallel=yes} configure:31904: [ HDF5 ] -- Checking whether HDF5 sources need compilation and installation... configure:31920: result: yes configure:31935: [ HDF5 ] -- Building the sources in parallel configure:31953: [ HDF5 ] -- Installing the headers and libraries in to directory (/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0) configure:31970: [ HDF5 ] -- Automation Status: configure:31975: [ HDF5 ] -- xx Configuration := SUCCESS(B configure:31994: [ HDF5 ] -- xx Build := SUCCESS(B configure:32013: [ HDF5 ] -- xx Installation := SUCCESS(B configure:32039: [ HDF5 ] -- Successful configure/build/install automated (status=SUCCESS(B) configure:32041: [ HDF5 ] -- Installed package under: /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0 configure:32048: *** ================================================================================================================== *** configure:32096: checking for gpfs_stat in -lgpfs configure:32121: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG conftest.c -lgpfs -lc++ -lz -ldl -lm -lm -lm -lm >&5 ld: library not found for -lgpfs clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:32121: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char gpfs_stat (); | int | main () | { | return gpfs_stat (); | ; | return 0; | } configure:32130: result: no configure:32149: checking hdf5.h usability configure:32149: /usr/local/bin/mpicc -c -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c >&5 configure:32149: $? = 0 configure:32149: result: yes configure:32149: checking hdf5.h presence configure:32149: /usr/local/bin/mpicc -E -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c configure:32149: $? = 0 configure:32149: result: yes configure:32149: checking for hdf5.h configure:32149: result: yes configure:32175: checking for H5Fopen in -lhdf5 configure:32200: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lhdf5 -lz -lc++ -lz -ldl -lm -lm -lm -lm -lz -lc++ -lz -ldl -lm -lm -lm -lm >&5 configure:32200: $? = 0 configure:32210: result: yes configure:32279: checking for h5cc configure:32312: result: no configure:32279: checking for h5pcc configure:32297: found /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/h5pcc configure:32309: result: /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/h5pcc configure:32320: checking for parallel HDF5 support configure:32325: result: yes configure:32353: checking for H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS configure:32371: /usr/local/bin/mpicc -E -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c configure:32371: $? = 0 configure:32372: result: yes configure:32394: checking if CCMIO support is enabled configure:32408: result: yes configure:32416: checking if CCMIO support available configure:32418: result: configure:32450: checking ccmio.h usability configure:32450: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:87:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:32450: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:32450: result: no configure:32450: checking ccmio.h presence configure:32450: /usr/local/bin/mpicc -E conftest.c conftest.c:54:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:32450: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:32450: result: no configure:32450: checking for ccmio.h configure:32450: result: no configure:32464: checking ccmioutility.h usability configure:32464: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:87:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:32464: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:32464: result: no configure:32464: checking ccmioutility.h presence configure:32464: /usr/local/bin/mpicc -E conftest.c conftest.c:54:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:32464: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:32464: result: no configure:32464: checking for ccmioutility.h configure:32464: result: no configure:32478: checking ccmiocore.h usability configure:32478: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:87:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:32478: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:32478: result: no configure:32478: checking ccmiocore.h presence configure:32478: /usr/local/bin/mpicc -E conftest.c conftest.c:54:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:32478: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:32478: result: no configure:32478: checking for ccmiocore.h configure:32478: result: no configure:32497: checking unsuccessful, Ccmio support disabled configure:32499: result: configure:32537: checking if DAMSEL support is enabled configure:32554: result: no configure:32559: checking if DAMSEL support available configure:32632: result: no configure:32685: checking if PNetCDF support is enabled configure:32691: result: no configure:32942: *** ================================================================================================================== *** configure:32947: [ NetCDF ] -- Downloading sources from URL: ftp://ftp.unidata.ucar.edu/pub/netcdf/old/netcdf-4.3.2.tar.gz configure:32988: [ NetCDF ] -- CURL: NetCDF package downloading to /Users/wujie/SourceCode/moab/sandbox/archives/netcdf-4.3.2.tar.gz configure:33007: configure:33021: [ NetCDF ] -- Deflating archive (/Users/wujie/SourceCode/moab/sandbox/archives/netcdf-4.3.2.tar.gz => /Users/wujie/SourceCode/moab/sandbox/netcdf) configure:33030: [ NetCDF ] -- Untar file: /Users/wujie/SourceCode/moab/sandbox/archives/netcdf-4.3.2.tar.gz configure:33032: [ NetCDF ] -- Source dir: /Users/wujie/SourceCode/moab/sandbox/netcdf configure:33061: configure:33131: [ NetCDF ] -- Configuring with default options (debug=no with-HDF5=yes shared=no) configure:33145: [ NetCDF ] -- Checking whether NetCDF sources need compilation and installation... configure:33161: result: yes configure:33175: [ NetCDF ] -- Building the sources in parallel configure:33194: [ NetCDF ] -- Installing the headers and libraries in to directory {/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0} configure:33212: [ NetCDF ] -- Automation Status: configure:33217: [ NetCDF ] -- xx Configuration := SUCCESS(B configure:33236: [ NetCDF ] -- xx Build := SUCCESS(B configure:33255: [ NetCDF ] -- xx Installation := SUCCESS(B configure:33281: [ NetCDF ] -- Successful configure/build/install automated (status=SUCCESS(B) configure:33283: [ NetCDF ] -- Installed package under: /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0 configure:33290: *** ================================================================================================================== *** configure:33310: checking if NetCDF support is enabled configure:33324: result: yes configure:33357: checking for nc-config configure:33375: found /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/nc-config configure:33388: result: /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/nc-config configure:33423: checking netcdf.h usability configure:33423: /usr/local/bin/mpicc -c -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c >&5 configure:33423: $? = 0 configure:33423: result: yes configure:33423: checking netcdf.h presence configure:33423: /usr/local/bin/mpicc -E -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c configure:33423: $? = 0 configure:33423: result: yes configure:33423: checking for netcdf.h configure:33423: result: yes configure:33434: checking if NC_MAX_DIMS is at least 65536 configure:33447: /usr/local/bin/mpicc -c -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c >&5 conftest.c:59:9: error: 'arr' declared as an array with a negative size int arr[1 + (int)(NC_MAX_DIMS) - (int)(65536)]; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 error generated. configure:33447: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | /* end confdefs.h. */ | #include | int | main () | { | int arr[1 + (int)(NC_MAX_DIMS) - (int)(65536)]; | ; | return 0; | } configure:33451: result: no configure:33457: checking if NC_MAX_VARS is at least 524288 configure:33470: /usr/local/bin/mpicc -c -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c >&5 conftest.c:59:9: error: 'arr' declared as an array with a negative size int arr[1 + (int)(NC_MAX_VARS) - (int)(524288)]; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 error generated. configure:33470: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | /* end confdefs.h. */ | #include | int | main () | { | int arr[1 + (int)(NC_MAX_VARS) - (int)(524288)]; | ; | return 0; | } configure:33474: result: no configure:33490: checking for nc_create in -lnetcdf configure:33515: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -lnetcdf -lhdf5_hl -lm -lcurl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -ldl -lm -lz -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lnetcdf -lc++ -lz -ldl -lm -lm -lm -lm >&5 configure:33515: $? = 0 configure:33524: result: yes configure:33781: checking if CGNS support is enabled configure:33795: result: yes configure:33838: checking cgnslib.h usability configure:33838: /usr/local/bin/mpicc -c -O2 -DNDEBUG conftest.c >&5 conftest.c:89:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:33838: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | #define HAVE_NETCDF 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:33838: result: no configure:33838: checking cgnslib.h presence configure:33838: /usr/local/bin/mpicc -E conftest.c conftest.c:56:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:33838: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | #define HAVE_NETCDF 1 | /* end confdefs.h. */ | #include configure:33838: result: no configure:33838: checking for cgnslib.h configure:33838: result: no configure:33842: WARNING: CGNS header not found. configure:33849: checking for cg_open in -lcgns configure:33874: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lcgns -lc++ -lz -ldl -lm -lm -lm -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:33874: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | #define HAVE_NETCDF 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:33883: result: no configure:33952: checking for cg_open in -lcgns configure:33977: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -lc++ -lz -ldl -lm -lm -lm -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:33977: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | #define HAVE_NETCDF 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:33986: result: no configure:33995: checking for cg_open in -lcgns configure:34020: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -lcurl -lc++ -lz -ldl -lm -lm -lm -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:34020: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.9.2pre" | #define PACKAGE_STRING "MOAB 4.9.2pre" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.9.2pre" | #define F77_MAIN main | #define FC_MAIN main | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define HAVE_IMESH 1 | #define VERSION "4.9.2pre" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 9 | #define VERSION_PATCH 2pre | #define VERSION_STRING "MOAB 4.9.2pre" | #define HAVE_STDISFINITE 1 | #define HAVE_ISFINITE 1 | #define HAVE_FINITE 1 | #define UNORDERED_MAP_NS std | #define HAVE_UNORDERED_MAP unordered_map | #define HAVE_UNORDERED_SET unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | #define HAVE_NETCDF_H 1 | #define HAVE_NETCDF 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:34029: result: no configure:34055: WARNING: "CGNS support disabled" configure:34107: checking for doxygen configure:34125: found /Applications/Doxygen.app/Contents/Resources//doxygen configure:34137: result: /Applications/Doxygen.app/Contents/Resources//doxygen configure:34372: *** ================================================================================================================== *** configure:34377: [ METIS ] -- Downloading sources from URL: http://ftp.mcs.anl.gov/pub/petsc/externalpackages/metis-5.1.0-p2.tar.gz configure:34418: [ METIS ] -- CURL: METIS package downloading to /Users/wujie/SourceCode/moab/sandbox/archives/metis-5.1.0-p2.tar.gz configure:34437: configure:34451: [ METIS ] -- Deflating archive (/Users/wujie/SourceCode/moab/sandbox/archives/metis-5.1.0-p2.tar.gz => /Users/wujie/SourceCode/moab/sandbox/metis) configure:34460: [ METIS ] -- Untar file: /Users/wujie/SourceCode/moab/sandbox/archives/metis-5.1.0-p2.tar.gz configure:34462: [ METIS ] -- Source dir: /Users/wujie/SourceCode/moab/sandbox/metis configure:34491: configure:34579: [ METIS ] -- Configuring with default options {debug=no} configure:34604: [ METIS ] -- Checking whether METIS sources need compilation and installation... configure:34620: result: yes configure:34635: [ METIS ] -- Building the sources in parallel configure:34680: [ METIS ] -- Installing the headers and libraries in to directory configure:34753: [ METIS ] -- Automation Status: configure:34758: [ METIS ] -- xx Configuration := SUCCESS(B configure:34777: [ METIS ] -- xx Build := SUCCESS(B configure:34796: [ METIS ] -- xx Installation := SUCCESS(B configure:34822: [ METIS ] -- Successful configure/build/install automated (status=SUCCESS(B) configure:34824: [ METIS ] -- Installed package under: /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0 configure:34831: *** ================================================================================================================== *** configure:34870: [ METIS ] -- Searching for Metis version style in /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0. configure:34880: [ METIS ] -- Found Metis version 5.1.0p2. configure:34904: checking metis.h usability configure:34904: /usr/local/bin/mpicc -c -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c >&5 configure:34904: $? = 0 configure:34904: result: yes configure:34904: checking metis.h presence configure:34904: /usr/local/bin/mpicc -E -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include conftest.c configure:34904: $? = 0 configure:34904: result: yes configure:34904: checking for metis.h configure:34904: result: yes configure:34906: [ METIS ] -- Successfully found metis.h! configure:34919: checking for METIS_MeshToDual in -lmetis configure:34945: /usr/local/bin/mpicc -o conftest -O2 -DNDEBUG -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib conftest.c -lmetis -lm -lc++ -lz -ldl -lm -lm -lm -lm -lc++ -lz -ldl -lm -lm -lm -lm >&5 configure:34945: $? = 0 configure:34954: result: yes configure:34976: [ METIS ] -- Configuring library with Metis support configure:36405: checking if iRel support is to be built configure:36407: result: no configure:36559: checking if mbconvert is to be built configure:36561: result: yes configure:36591: checking if mbcoupler_test is to be built configure:36593: result: configure:36623: checking if hexmodops is to be built configure:36625: result: yes configure:36655: checking if vtkMOABReader is to be built configure:36657: result: no configure:36687: checking if mbsize is to be built configure:36689: result: yes configure:36719: checking if mbskin is to be built configure:36721: result: yes configure:36751: checking if mbtagprop is to be built configure:36753: result: yes configure:36783: checking if mbmem is to be built configure:36785: result: yes configure:36815: checking if spheredecomp is to be built configure:36817: result: yes configure:36847: checking if mbsurfplot is to be built configure:36849: result: yes configure:36883: checking if mbpart is to be built configure:36885: result: yes configure:36950: checking if dagmc is to be built configure:36952: result: no configure:36987: checking if gsets is to be built configure:36989: result: yes configure:37019: checking if mbmerge is to be built configure:37021: result: yes configure:37051: checking if mbdepth is to be built configure:37053: result: yes configure:37084: checking if mbcoupler is to be built configure:37086: result: no configure:37116: checking if mcnpmit is to be built configure:37118: result: no configure:37148: checking if refiner is to be built configure:37150: result: no configure:37279: checking if h5mtools is to be built configure:37281: result: yes configure:37311: checking if mbcslam is to be built configure:37313: result: no configure:37343: checking if mbquality is to be built configure:37345: result: yes configure:37376: checking if ahf is to be built configure:37378: result: no configure:37408: checking if mbumr is to be built configure:37410: result: yes configure:39808: checking that generated files are newer than configure configure:39814: result: done configure:40042: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by MOAB config.status 4.9.2pre, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on dyn-160-39-11-172.dyn.columbia.edu config.status:1573: creating Makefile config.status:1573: creating moab.make config.status:1573: creating MOABConfig.cmake config.status:1573: creating examples/makefile config.status:1573: creating examples/old/deform_mesh/makefile config.status:1573: creating src/Makefile config.status:1573: creating src/io/Makefile config.status:1573: creating src/io/mhdf/Makefile config.status:1573: creating src/LocalDiscretization/Makefile config.status:1573: creating src/RefineMesh/Makefile config.status:1573: creating src/parallel/Makefile config.status:1573: creating src/verdict/Makefile config.status:1573: creating test/Makefile config.status:1573: creating test/dagmc/Makefile config.status:1573: creating test/h5file/Makefile config.status:1573: creating test/dual/Makefile config.status:1573: creating test/obb/Makefile config.status:1573: creating test/perf/Makefile config.status:1573: creating test/perf/point_location/Makefile config.status:1573: creating test/io/Makefile config.status:1573: creating test/parallel/Makefile config.status:1573: creating itaps/iBase_f.h config.status:1573: creating itaps/Makefile config.status:1573: creating itaps/imesh/Makefile config.status:1573: creating itaps/imesh/iMesh-Defs.inc config.status:1573: creating itaps/fbigeom/Makefile config.status:1573: creating itaps/fbigeom/FBiGeom-Defs.inc config.status:1573: creating itaps/irel/Makefile config.status:1573: creating itaps/irel/iRel-Defs.inc config.status:1573: creating tools/Makefile config.status:1573: creating tools/refiner/Makefile config.status:1573: creating tools/mbcoupler/Makefile config.status:1573: creating tools/mbcslam/Makefile config.status:1573: creating tools/mcnpmit/Makefile config.status:1573: creating tools/dagmc/Makefile config.status:1573: creating tools/vtkMOABReader/CMakeLists.txt config.status:1573: creating doc/user.dox config.status:1573: creating doc/config.tex config.status:1573: creating MeshFiles/Makefile config.status:1573: creating MeshFiles/unittest/Makefile config.status:1573: creating MeshFiles/unittest/io/Makefile config.status:1573: creating MeshFiles/unittest/fbigeom/Makefile config.status:1573: creating MeshFiles/unittest/irel/Makefile config.status:1573: creating MeshFiles/unittest/dagmc/Makefile config.status:1573: creating MeshFiles/unittest/mbcslam/Makefile config.status:1573: creating MeshFiles/unittest/h5file/Makefile config.status:1573: creating MeshFiles/examples/Makefile config.status:1573: creating src/moab/Version.h config.status:1754: src/moab/Version.h is unchanged config.status:1573: creating src/moab/EntityHandle.hpp config.status:1754: src/moab/EntityHandle.hpp is unchanged config.status:1573: creating src/parallel/moab_mpi_config.h config.status:1754: src/parallel/moab_mpi_config.h is unchanged config.status:1573: creating src/moab/MOABConfig.h config.status:1802: executing depfiles commands config.status:1802: executing libtool commands config.status:1802: executing src/moab/MOABConfig.h commands config.status:2950: creating src/moab/MOABConfig.h - prefix MOAB for src/moab/MOABConfig.h defines configure:43073: result: C: /usr/local/bin/mpicc -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include configure:43075: result: C++: /usr/local/bin/mpic++ -O2 -DNDEBUG -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include configure:43078: result: Fortran90: /usr/local/bin/mpif90 -O2 -fcray-pointer -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include configure:43082: result: Fortran77: /usr/local/bin/mpif77 -O2 -fcray-pointer -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include configure:43085: result: Linker: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -lnetcdf -lhdf5_hl -lm -lcurl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -ldl -lm -lz -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -stdlib=libc++ -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/src/.libs -lMOAB -lnetcdf -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -lmetis -lc++ -lz -ldl -lm -lm -lm -lm ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-apple-darwin15.4.0 ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=/usr/local/bin/mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=/usr/local/bin/mpic++ ac_cv_env_F77_set=set ac_cv_env_F77_value=/usr/local/bin/mpif77 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=/usr/local/bin/mpif90 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPIEXEC_NP_set= ac_cv_env_MPIEXEC_NP_value= ac_cv_env_MPIEXEC_set= ac_cv_env_MPIEXEC_value= ac_cv_env_NP_set= ac_cv_env_NP_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_libs=' -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm' ac_cv_f77_main=main ac_cv_fc_compiler_gnu=yes ac_cv_fc_libs=' -L/usr/local/lib -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin14/5.1.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lquadmath -lm' ac_cv_fc_main=main ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_pp_define=-D ac_cv_fc_pp_srcext_='-x f95-cpp-input' ac_cv_fc_pp_srcext_F=none ac_cv_fortran_main=main ac_cv_func_vsnprintf=yes ac_cv_header_ccmio_h=no ac_cv_header_ccmiocore_h=no ac_cv_header_ccmioutility_h=no ac_cv_header_cgnslib_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_metis_h=yes ac_cv_header_mpi_h=yes ac_cv_header_netcdf_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-apple-darwin15.4.0 ac_cv_lib_cgns_cg_open=no ac_cv_lib_dl_dlopen=yes ac_cv_lib_gpfs_gpfs_stat=no ac_cv_lib_hdf5___H5Fopen=yes ac_cv_lib_m_pow=yes ac_cv_lib_metis_METIS_MeshToDual=yes ac_cv_lib_netcdf_nc_create=yes ac_cv_lib_sz_SZ_Decompress=no ac_cv_lib_z_compress=yes ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_DOXYGEN=/Applications/Doxygen.app/Contents/Resources//doxygen ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_H5CC=/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/h5pcc ac_cv_path_MKDIR_P=/bin/mkdir ac_cv_path_NC_CONFIG=/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/nc-config ac_cv_path_SED=sed ac_cv_path_SHASUM_X=/usr/bin/shasum ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/bin/dd ac_cv_prog_AWK=awk ac_cv_prog_CPP='/usr/local/bin/mpicc -E' ac_cv_prog_CXXCPP='/usr/local/bin/mpic++ -E' ac_cv_prog_HAVE_BASENAME=yes ac_cv_prog_HAVE_BZIP2=yes ac_cv_prog_HAVE_CURL=yes ac_cv_prog_HAVE_DIRNAME=yes ac_cv_prog_HAVE_MD5SUM=no ac_cv_prog_HAVE_READLINK=yes ac_cv_prog_HAVE_RSYNC=yes ac_cv_prog_HAVE_SCP=yes ac_cv_prog_HAVE_SHASUM=yes ac_cv_prog_HAVE_TAR=yes ac_cv_prog_HAVE_UNZIP=yes ac_cv_prog_HAVE_WGET=no ac_cv_prog_MPIEXEC=mpiexec ac_cv_prog_SED=sed ac_cv_prog_ZCAT='gunzip -c' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=/usr/local/bin/mpicc ac_cv_prog_ac_ct_DSYMUTIL=dsymutil ac_cv_prog_ac_ct_LIPO=lipo ac_cv_prog_ac_ct_NMEDIT=nmedit ac_cv_prog_ac_ct_OTOOL=otool ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sha_HDF5=251fc2f5645126386bfd7765652df5d0ec7bdd4e ac_cv_sha_METIS=c5b1f3e71a6a0c7acbce30fa6d7df59689c82a01 ac_cv_sha_NetCDF=1c82d804c31eeac417747184edf72905618eba4e ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-apple-darwin15.4.0 ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes ax_cv_cxx_have_finite=yes ax_cv_cxx_have_isfinite=yes ax_cv_cxx_have_stdisfinite=yes fathom_cv_std_count_old_sgi=no fathom_cv_std_vector_templatized_insert=yes lt_cv_apple_cc_single_mod=yes lt_cv_ar_at_file=no lt_cv_deplibs_check_method=pass_all lt_cv_dlopen=dlopen lt_cv_dlopen_libs=-ldl lt_cv_dlopen_self=yes lt_cv_dlopen_self_static=yes lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_exported_symbols_list=yes lt_cv_ld_force_load=yes lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_LDCXX=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_NM=/usr/bin/nm lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fno-common -DPIC' lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC' lt_cv_prog_compiler_pic_F77=-fno-common lt_cv_prog_compiler_pic_FC=-fno-common lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_F77=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=no lt_cv_prog_gnu_ldcxx=no lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=196608 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' mk_cv_cxx_unordered_map=std pac_cv_prog_f77_has_pointer=yes pac_cv_prog_fc_has_pointer=yes snl_cv_template_func_specialization=yes snl_cv_template_specialization=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /Users/wujie/SourceCode/moab/config/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_LDFLAGS=' -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -lnetcdf -lhdf5_hl -lm -lcurl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -ldl -lm -lz -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /Users/wujie/SourceCode/moab/config/missing autoconf' AUTOHEADER='${SHELL} /Users/wujie/SourceCode/moab/config/missing autoheader' AUTOMAKE='${SHELL} /Users/wujie/SourceCode/moab/config/missing automake-1.15' AWK='awk' CC='/usr/local/bin/mpicc' CCDEPMODE='depmode=gcc3' CCMIO_LIBS='' CFLAGS=' -O2 -DNDEBUG' CGM_CPPFLAGS='' CGM_DIR='' CGM_LDFLAGS='' CGM_LIBS='' CGM_LTFLAGS='' CGNS_LIBS='' CPP='/usr/local/bin/mpicc -E' CPPFLAGS=' -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include ' CXX='/usr/local/bin/mpic++' CXXCPP='/usr/local/bin/mpic++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -O2 -DNDEBUG' CXX_LDFLAGS=' -stdlib=libc++' CYGPATH_W='echo' DAGMC_LIBS='' DAMSEL_LIBS='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DISTCHECK_CONFIGURE_FLAGS=' --enable-fortran=yes --with-mpi="/usr/local" --enable-debug=no --enable-optimize=yes --enable-32bit=no --enable-64bit=no --enable-imesh=yes --enable-fbigeom=no --enable-irel=no --with-hdf5="/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0" --with-netcdf="/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0" --with-metis="/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0" --enable-mbconvert="yes" --enable-mbcoupler_test="" --enable-hexmodops="yes" --enable-vtkMOABReader="no" --enable-mbsize="yes" --enable-mbskin="yes" --enable-mbtagprop="yes" --enable-mbmem="yes" --enable-spheredecomp="yes" --enable-mbsurfplot="yes" --enable-mbpart="yes" --enable-dagmc="no" --enable-gsets="yes" --enable-mbmerge="yes" --enable-mbdepth="yes" --enable-mbcoupler="no" --enable-mcnpmit="no" --enable-refiner="no" --enable-h5mtools="yes" --enable-mbcslam="no" --enable-mbquality="yes" --enable-ahf="no" --enable-mbumr="yes" CC="/usr/local/bin/mpicc" CXX="/usr/local/bin/mpic++" FC="/usr/local/bin/mpif90" F77="/usr/local/bin/mpif77" LDFLAGS=" -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib" LIBS=" -lc++ -lz -ldl -lm -lm -lm -lm"' DLLTOOL='false' DOXYGEN='/Applications/Doxygen.app/Contents/Resources//doxygen' DSYMUTIL='dsymutil' DUMPBIN='' ECHO_C='\c' ECHO_N='' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLE_AHF_FALSE='' ENABLE_AHF_TRUE='#' ENABLE_DOCS_FALSE='#' ENABLE_DOCS_TRUE='' ENABLE_FORTRAN='yes' ENABLE_FORTRAN_FALSE='#' ENABLE_FORTRAN_TRUE='' ENABLE_ahf_FALSE='' ENABLE_ahf_TRUE='#' ENABLE_dagmc_FALSE='' ENABLE_dagmc_TRUE='#' ENABLE_fbigeom_FALSE='' ENABLE_fbigeom_TRUE='#' ENABLE_gsets_FALSE='#' ENABLE_gsets_TRUE='' ENABLE_h5mtools_FALSE='#' ENABLE_h5mtools_TRUE='' ENABLE_hexmodops_FALSE='#' ENABLE_hexmodops_TRUE='' ENABLE_imesh_FALSE='#' ENABLE_imesh_TRUE='' ENABLE_irel_FALSE='' ENABLE_irel_TRUE='#' ENABLE_mbconvert_FALSE='#' ENABLE_mbconvert_TRUE='' ENABLE_mbcoupler_FALSE='' ENABLE_mbcoupler_TRUE='#' ENABLE_mbcoupler_test_FALSE='#' ENABLE_mbcoupler_test_TRUE='' ENABLE_mbcslam_FALSE='' ENABLE_mbcslam_TRUE='#' ENABLE_mbdepth_FALSE='#' ENABLE_mbdepth_TRUE='' ENABLE_mbmem_FALSE='#' ENABLE_mbmem_TRUE='' ENABLE_mbmerge_FALSE='#' ENABLE_mbmerge_TRUE='' ENABLE_mbpart_FALSE='#' ENABLE_mbpart_TRUE='' ENABLE_mbquality_FALSE='#' ENABLE_mbquality_TRUE='' ENABLE_mbsize_FALSE='#' ENABLE_mbsize_TRUE='' ENABLE_mbskin_FALSE='#' ENABLE_mbskin_TRUE='' ENABLE_mbsurfplot_FALSE='#' ENABLE_mbsurfplot_TRUE='' ENABLE_mbtagprop_FALSE='#' ENABLE_mbtagprop_TRUE='' ENABLE_mbumr_FALSE='#' ENABLE_mbumr_TRUE='' ENABLE_mcnpmit_FALSE='' ENABLE_mcnpmit_TRUE='#' ENABLE_metis_FALSE='#' ENABLE_metis_TRUE='' ENABLE_parmetis_FALSE='' ENABLE_parmetis_TRUE='#' ENABLE_refiner_FALSE='' ENABLE_refiner_TRUE='#' ENABLE_spheredecomp_FALSE='#' ENABLE_spheredecomp_TRUE='' ENABLE_vtkMOABReader_FALSE='' ENABLE_vtkMOABReader_TRUE='#' EXEEXT='' EXPORT_LDFLAGS='-L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -lnetcdf -lhdf5_hl -lm -lcurl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -ldl -lm -lz -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib' EXPORT_LTFLAGS='' F77='/usr/local/bin/mpif77' FC='/usr/local/bin/mpif90' FCDEFS='-DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION' FCFLAGS=' -O2 -fcray-pointer' FCFLAGS_='-x f95-cpp-input' FCFLAGS_F='' FCLIBS=' -lc++ -lmpi_cxx' FCPPFLAGS='-I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include' FC_DEFINE='-D' FFLAGS=' -O2 -fcray-pointer' FGREP='/usr/bin/grep -F' FLIBS=' -lc++' GREP='/usr/bin/grep' H5CC='/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/h5pcc' HAVE_BASENAME='yes' HAVE_BZIP2='yes' HAVE_CCMIO_FALSE='' HAVE_CCMIO_TRUE='#' HAVE_CGM_FALSE='' HAVE_CGM_TRUE='#' HAVE_CGNS_FALSE='' HAVE_CGNS_TRUE='#' HAVE_CURL='yes' HAVE_DAMSEL_FALSE='' HAVE_DAMSEL_TRUE='#' HAVE_DIRNAME='yes' HAVE_HDF5_FALSE='#' HAVE_HDF5_PARALLEL_FALSE='#' HAVE_HDF5_PARALLEL_TRUE='' HAVE_HDF5_TRUE='' HAVE_IEEEFP_H_FALSE='#' HAVE_IEEEFP_H_TRUE='' HAVE_IGEOM='no' HAVE_IMESH='yes' HAVE_IREL='no' HAVE_MD5SUM='no' HAVE_MPI_FALSE='#' HAVE_MPI_TRUE='' HAVE_NETCDF_FALSE='#' HAVE_NETCDF_TRUE='' HAVE_PNETCDF_FALSE='' HAVE_PNETCDF_TRUE='#' HAVE_READLINK='yes' HAVE_RSYNC='yes' HAVE_SCP='yes' HAVE_SHASUM='yes' HAVE_TAR='yes' HAVE_UNZIP='yes' HAVE_VALGRIND_FALSE='#' HAVE_VALGRIND_TRUE='' HAVE_WGET='no' HAVE_ZCAT_FALSE='' HAVE_ZCAT_TRUE='#' HAVE_ZOLTAN_FALSE='' HAVE_ZOLTAN_TRUE='#' HDF5_LIBS='-lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm' HDF5_SRCDIR='/Users/wujie/SourceCode/moab/sandbox/hdf5/hdf5-1.8.12' IGEOM_CONFIG_OPTIONS='' IGEOM_DEFINES='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld' LDFLAGS=' -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib' LIBOBJS='' LIBS=' -lc++ -lz -ldl -lm -lm -lm -lm' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='lipo' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /Users/wujie/SourceCode/moab/config/missing makeinfo' MANIFEST_TOOL=':' MB_DEFS=' -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION ' MD5SUM_X='' METIS_DIR='/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0' METIS_INCLUDES='-I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include' METIS_LIBS='-lmetis' METIS_SRCDIR='/Users/wujie/SourceCode/moab/sandbox/metis/metis-5.1.0-p2' MKDIR_P='/bin/mkdir -p' MOAB_CXX_LIBS='' MOAB_CXX_LINKFLAGS='' MPE_LIBS='' MPIEXEC='mpiexec' MPIEXEC_NP='-np' MPITYPE='OPENMPI-3' NC_CONFIG='/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/bin/nc-config' NETCDF_CPPFLAGS='-I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include -isystem /Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include' NETCDF_LDFLAGS='-L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib -lnetcdf -lhdf5_hl -lm -lcurl -lhdf5 -lz -lz -lc++ -lz -ldl -lm -lm -lm -lm -ldl -lm -lz' NETCDF_LIBS='-lnetcdf ' NETCDF_SRCDIR='/Users/wujie/SourceCode/moab/sandbox/netcdf/netcdf-4.3.2' NETCDF_VERSION='netCDF 4.3.2' NM='/usr/bin/nm' NMEDIT='nmedit' NP='2' OBJDUMP='false' OBJEXT='o' OTOOL64=':' OTOOL='otool' PACKAGE='moab' PACKAGE_BUGREPORT='moab-dev@mcs.anl.gov' PACKAGE_NAME='MOAB' PACKAGE_STRING='MOAB 4.9.2pre' PACKAGE_TARNAME='moab' PACKAGE_URL='http://sigma.mcs.anl.gov' PACKAGE_VERSION='4.9.2pre' PARALLEL_FALSE='#' PARALLEL_TRUE='' PARMETIS_DIR='' PARMETIS_INCLUDES='' PARMETIS_LIBS='' PARMETIS_SRCDIR='' PATH_SEPARATOR=':' PNETCDF_LIBS='' RANLIB='ranlib' SED='sed' SET_MAKE='' SHASUM_X='/usr/bin/shasum' SHELL='/bin/sh' SIZEOF_VOID_P='8' STRIP='strip' USER_CONFIGURE_CMD='./configure '\''--with-mpi=/usr/local'\'' '\''CC=/usr/local/bin/mpicc'\'' '\''CXX=/usr/local/bin/mpic++'\'' '\''FC=/usr/local/bin/mpif90'\'' '\''F77=/usr/local/bin/mpif77'\'' '\''--download-metis'\'' '\''--download-hdf5'\'' '\''--download-netcdf'\'' '\''--enable-docs'\'' '\''--with-doxygen=/Applications/Doxygen.app/Contents/Resources/'\''' USE_MPIEXEC_FALSE='#' USE_MPIEXEC_TRUE='' VERSION='4.9.2pre' VTK_INCLUDES='' VTK_INC_DIR='' VTK_LIBS='' VTK_LIB_DIR='' WITH_MPE='no' XMKMF='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ZCAT='gunzip -c' ZOLTAN_INC_FLAGS='-I/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/include ' ZOLTAN_LIBS=' ' ZOLTAN_LIB_FLAGS='-L/Users/wujie/SourceCode/moab/sandbox/x86_64-apple-darwin15.4.0/lib ' ac_ct_AR='ar' ac_ct_CC='/usr/local/bin/mpicc' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-apple-darwin15.4.0' build_alias='' build_cpu='x86_64' build_os='darwin15.4.0' build_vendor='apple' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' downloadhdf5='yes' downloadmetis='yes' downloadnetcdf='yes' downloadparmetis='no' dvidir='${docdir}' enablehdf5='yes' enablehdf5parallel='yes' enablemetis='yes' enablempi='yes' enablenetcdf='yes' enableparmetis='no' enablepnetcdf='no' examplesdir='${datadir}/examples' exec_prefix='${prefix}' host='x86_64-apple-darwin15.4.0' host_alias='' host_cpu='x86_64' host_os='darwin15.4.0' host_vendor='apple' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /Users/wujie/SourceCode/moab/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr/local' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-apple-darwin15.4.0' target_alias='' target_cpu='x86_64' target_os='darwin15.4.0' target_vendor='apple' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "MOAB" #define PACKAGE_TARNAME "moab" #define PACKAGE_VERSION "4.9.2pre" #define PACKAGE_STRING "MOAB 4.9.2pre" #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" #define PACKAGE_URL "http://sigma.mcs.anl.gov" #define PACKAGE "moab" #define VERSION "4.9.2pre" #define F77_MAIN main #define FC_MAIN main #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define TEMPLATE_SPECIALIZATION 1 #define TEMPLATE_FUNC_SPECIALIZATION 1 #define HAVE_VSNPRINTF 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define SIZEOF_VOID_P 8 #define HAVE_SIZE_T 1 #define HAVE_PTRDIFF_T 1 #define HAVE_IMESH 1 #define VERSION "4.9.2pre" #define VERSION_MAJOR 4 #define VERSION_MINOR 9 #define VERSION_PATCH 2pre #define VERSION_STRING "MOAB 4.9.2pre" #define HAVE_STDISFINITE 1 #define HAVE_ISFINITE 1 #define HAVE_FINITE 1 #define UNORDERED_MAP_NS std #define HAVE_UNORDERED_MAP unordered_map #define HAVE_UNORDERED_SET unordered_set #define HAVE_MPI 1 #define HAVE_HDF5_H 1 #define HAVE_HDF5 1 #define HAVE_HDF5_PARALLEL 1 #define HAVE_NETCDF_H 1 #define HAVE_NETCDF 1 #define HAVE_METIS 1 #define HAVE_MBCONVERT 1 #define HAVE_MBCOUPLER_TEST 1 #define HAVE_HEXMODOPS 1 #define HAVE_MBSIZE 1 #define HAVE_MBSKIN 1 #define HAVE_MBTAGPROP 1 #define HAVE_MBMEM 1 #define HAVE_SPHEREDECOMP 1 #define HAVE_MBSURFPLOT 1 #define HAVE_MBPART 1 #define HAVE_GSETS 1 #define HAVE_MBMERGE 1 #define HAVE_MBDEPTH 1 #define HAVE_H5MTOOLS 1 #define HAVE_MBQUALITY 1 #define HAVE_MBUMR 1 #define CONFIGURE_INFO "./configure run on Fri May 13 14:06:07 EDT 2016" #define CONFIGURE_COMMAND "./configure '--with-mpi=/usr/local' 'CC=/usr/local/bin/mpicc' 'CXX=/usr/local/bin/mpic++' 'FC=/usr/local/bin/mpif90' 'F77=/usr/local/bin/mpif77' '--download-metis' '--download-hdf5' '--download-netcdf' '--enable-docs' '--with-doxygen=/Applications/Doxygen.app/Contents/Resources/'" configure: exit 0