<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Iulian,<div class=""><br class=""></div><div class="">Thanks for your reply. I think my configure is with mpi. Here is my configure command</div><div class=""><br class=""></div><div class=""><div style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">dyn-160-39-10-173:moab jiewu$ ./configure --download-metis --download-hdf5 --download-netcdf --download-mpich --enable-docs --with-doxygen=/Applications/Doxygen.app/Contents/Resources/</span></div>
<div class=""><br class=""></div>Best,</div><div class="">Jie</div><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On May 12, 2016, at 5:43 PM, Grindeanu, Iulian R. <<a href="mailto:iulian@mcs.anl.gov" class="">iulian@mcs.anl.gov</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div style="font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; direction: ltr; font-family: Tahoma; font-size: 10pt;" class="">Hi Jie,<br class="">Did you configure with mpi? What is your configure command?<span class="Apple-converted-space"> </span><br class=""><br class="">Iulian<br class=""><div style="font-family: 'Times New Roman'; font-size: 16px;" class=""><hr tabindex="-1" class=""><div id="divRpF285772" style="direction: ltr;" class=""><font face="Tahoma" size="2" class=""><b class="">From:</b><span class="Apple-converted-space"> </span><a href="mailto:moab-dev-bounces@mcs.anl.gov" class="">moab-dev-bounces@mcs.anl.gov</a><span class="Apple-converted-space"> </span>[<a href="mailto:moab-dev-bounces@mcs.anl.gov" class="">moab-dev-bounces@mcs.anl.gov</a>] on behalf of Jie Wu [<a href="mailto:jie.voo@gmail.com" class="">jie.voo@gmail.com</a>]<br class=""><b class="">Sent:</b><span class="Apple-converted-space"> </span>Thursday, May 12, 2016 4:23 PM<br class=""><b class="">To:</b><span class="Apple-converted-space"> </span><a href="mailto:moab-dev@mcs.anl.gov" class="">moab-dev@mcs.anl.gov</a><br class=""><b class="">Subject:</b><span class="Apple-converted-space"> </span>[MOAB-dev] Error message when compiling the mbcoupler_test.cpp<br class=""></font><br class=""></div><div class=""></div><div class="">Hi all,<div class=""><br class=""></div><div class="">My name is Jie and I am part of computational mechanics group at civil engineering dept. of Columbia university.</div><div class=""><br class=""></div><div class="">I am working on large deformation problems which may lead mesh distortions and a re-meshing become necessary. </div><div class=""><br class=""></div><div class="">I would like to compile mbcoupler_test.cpp to learn how it transfer the variables from old to the new mesh.</div><div class=""><br class=""></div><div class="">Now I can successfully compile the codes in build/examples and they works good! But I cannot compile the codes in folder build/tools/mbcoupler by following the instructions in build/tools/readme.tools, which shows error message like following.</div><div class=""><br class=""></div><div class="">Do you have any idea for this problem? Thanks a lot!</div><div class=""><br class=""></div><div class="">Best,</div><div class="">Jie</div><div class=""><br class=""></div><div class=""><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">DataCoupler.cpp:136:25:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">member access into incomplete</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> type 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> if (myPcomm && myPcomm->size() > 1) {</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">./DataCoupler.hpp:34:7:<span class="Apple-converted-space"> </span></span><span class="" style="">note:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(254, 253, 201);">forward declaration of</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">class ParallelComm;</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">DataCoupler.cpp:161:12:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">member access into incomplete</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> type 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> myPcomm->proc_config().crystal_router()->gs_tran...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">./DataCoupler.hpp:34:7:<span class="Apple-converted-space"> </span></span><span class="" style="">note:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(254, 253, 201);">forward declaration of</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">class ParallelComm;</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">DataCoupler.cpp:187:12:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">member access into incomplete</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> type 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> myPcomm->proc_config().crystal_router()->gs_tran...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">./DataCoupler.hpp:34:7:<span class="Apple-converted-space"> </span></span><span class="" style="">note:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(254, 253, 201);">forward declaration of</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> 'moab::ParallelComm'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">class ParallelComm;</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">3 errors generated.</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">make[2]: *** [DataCoupler.lo] Error 1</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">make[2]: *** Waiting for unfinished jobs....</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">Coupler.cpp:344:45:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">no member named 'gs_transfer' in</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> 'moab::gs_data::crystal_data'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> (myPc->proc_config().crystal_router())->gs_trans...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">Coupler.cpp:388:45:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">no member named 'gs_transfer' in</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> 'moab::gs_data::crystal_data'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> (myPc->proc_config().crystal_router())->gs_trans...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">Coupler.cpp:611:45:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">no member named 'gs_transfer' in</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> 'moab::gs_data::crystal_data'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> (myPc->proc_config().crystal_router())->gs_trans...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class="">Coupler.cpp:638:43:<span class="Apple-converted-space"> </span></span><span class="" style="color: rgb(195, 55, 32);">error:<span class="Apple-converted-space"> </span></span><span class="">no member named 'gs_transfer' in</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(0, 249, 0); background-color: rgb(0, 0, 0);"><span class=""> 'moab::gs_data::crystal_data'</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class=""> myPc->proc_config().crystal_router()->gs_transfe...</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(52, 189, 38); background-color: rgb(0, 0, 0);"><span class=""> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">4 errors generated.</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">make[2]: *** [Coupler.lo] Error 1</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">make[1]: *** [all-recursive] Error 1</span></div><div class="" style="margin: 0px; font-size: 14px; line-height: normal; font-family: 'Andale Mono'; color: rgb(254, 253, 201); background-color: rgb(0, 0, 0);"><span class="">make: *** [all-recursive] Error 1</span></div></div></div></div></div></div></blockquote></div><br class=""></div></body></html>