This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by MOAB configure 4.8.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --disable-fortran --disable-imesh --with-mpi=/Users/ihabia/src2/mpich-3.2/mpich3/ --with-hdf5=/Users/ihabia/src2/hdf5-1.8.16/hdf5/ --prefix=/Users/ihabia/src2/moab-4.8.2/moab/ ## --------- ## ## Platform. ## ## --------- ## hostname = dlm249-189.unibg.it uname -m = x86_64 uname -r = 14.5.0 uname -s = Darwin uname -v = Darwin Kernel Version 14.5.0: Tue Sep 1 21:23:09 PDT 2015; root:xnu-2782.50.1~1/RELEASE_X86_64 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 14.5.0: Tue Sep 1 21:23:09 PDT 2015; root:xnu-2782.50.1~1/RELEASE_X86_64 Kernel configured for up to 4 processors. 2 processors are physically available. 4 processors are logically available. Processor type: i486 (Intel 80486) Processors active: 0 1 2 3 Primary memory available: 8.00 gigabytes Default processor set: 217 tasks, 776 threads, 4 processors Load average: 2.59, Mach factor: 1.66 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /opt/local/bin PATH: /opt/local/sbin PATH: /usr/local/bin/ PATH: /Users/ihabia/src2/mpich-3.2/mpich3/bin/ PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/sbin PATH: /sbin PATH: /opt/X11/bin PATH: /usr/local/go/bin PATH: /usr/texbin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3253: checking build system type configure:3267: result: x86_64-apple-darwin14.5.0 configure:3287: checking host system type configure:3300: result: x86_64-apple-darwin14.5.0 configure:3320: checking target system type configure:3333: result: x86_64-apple-darwin14.5.0 configure:3375: checking for a BSD-compatible install configure:3443: result: /usr/bin/install -c configure:3454: checking whether build environment is sane configure:3509: result: yes configure:3660: checking for a thread-safe mkdir -p configure:3699: result: config/install-sh -c -d configure:3706: checking for gawk configure:3736: result: no configure:3706: checking for mawk configure:3736: result: no configure:3706: checking for nawk configure:3736: result: no configure:3706: checking for awk configure:3722: found /usr/bin/awk configure:3733: result: awk configure:3744: checking whether make sets $(MAKE) configure:3766: result: yes configure:3795: checking whether make supports nested variables configure:3812: result: yes configure:3941: checking for sed configure:3957: found /usr/bin/sed configure:3969: result: sed configure:4015: checking for style of include used by make configure:4043: result: GNU configure:4234: checking for gcc configure:4261: result: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc configure:4490: checking for C compiler version configure:4499: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc --version >&5 Apple LLVM version 7.0.0 (clang-700.1.76) Target: x86_64-apple-darwin14.5.0 Thread model: posix configure:4510: $? = 0 configure:4499: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -v >&5 mpicc for MPICH version 3.2 Apple LLVM version 7.0.0 (clang-700.1.76) Target: x86_64-apple-darwin14.5.0 Thread model: posix clang: warning: argument unused during compilation: '-I /Users/ihabia/src2/mpich-3.2/mpich3/include' configure:4510: $? = 0 configure:4499: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -V >&5 clang: error: unsupported option '-V -I/Users/ihabia/src2/mpich-3.2/mpich3/include' configure:4510: $? = 1 configure:4499: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -qversion >&5 clang: error: unknown argument: '-qversion' configure:4510: $? = 1 configure:4530: checking whether the C compiler works configure:4552: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc conftest.c >&5 configure:4556: $? = 0 configure:4604: result: yes configure:4607: checking for C compiler default output file name configure:4609: result: a.out configure:4615: checking for suffix of executables configure:4622: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest conftest.c >&5 configure:4626: $? = 0 configure:4648: result: configure:4670: checking whether we are cross compiling configure:4678: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest conftest.c >&5 configure:4682: $? = 0 configure:4689: ./conftest configure:4693: $? = 0 configure:4708: result: no configure:4713: checking for suffix of object files configure:4735: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c conftest.c >&5 configure:4739: $? = 0 configure:4760: result: o configure:4764: checking whether we are using the GNU C compiler configure:4783: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c conftest.c >&5 configure:4783: $? = 0 configure:4792: result: yes configure:4801: checking whether /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc accepts -g configure:4821: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -g conftest.c >&5 configure:4821: $? = 0 configure:4862: result: yes configure:4879: checking for /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc option to accept ISO C89 configure:4942: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -g -O2 conftest.c >&5 configure:4942: $? = 0 configure:4955: result: none needed configure:4980: checking whether /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc understands -c and -o together configure:5002: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c conftest.c -o conftest2.o configure:5005: $? = 0 configure:5002: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c conftest.c -o conftest2.o configure:5005: $? = 0 configure:5017: result: yes configure:5036: checking dependency style of /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc configure:5147: result: gcc3 configure:5167: checking how to run the C preprocessor configure:5198: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c configure:5198: $? = 0 configure:5212: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5212: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | #include configure:5237: result: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E configure:5257: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c configure:5257: $? = 0 configure:5271: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5271: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | #include configure:5476: checking for C++ compiler version configure:5485: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx --version >&5 Apple LLVM version 7.0.0 (clang-700.1.76) Target: x86_64-apple-darwin14.5.0 Thread model: posix configure:5496: $? = 0 configure:5485: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -v >&5 mpicxx for MPICH version 3.2 Apple LLVM version 7.0.0 (clang-700.1.76) Target: x86_64-apple-darwin14.5.0 Thread model: posix clang: warning: argument unused during compilation: '-I /Users/ihabia/src2/mpich-3.2/mpich3/include' configure:5496: $? = 0 configure:5485: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -V >&5 clang: error: unsupported option '-V -I/Users/ihabia/src2/mpich-3.2/mpich3/include' configure:5496: $? = 1 configure:5485: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -qversion >&5 clang: error: unknown argument: '-qversion' configure:5496: $? = 1 configure:5500: checking whether we are using the GNU C++ compiler configure:5519: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c conftest.cpp >&5 configure:5519: $? = 0 configure:5528: result: yes configure:5537: checking whether /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx accepts -g configure:5557: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -g conftest.cpp >&5 configure:5557: $? = 0 configure:5598: result: yes configure:5623: checking dependency style of /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx configure:5734: result: gcc3 configure:5754: checking how to run the C++ preprocessor configure:5781: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp configure:5781: $? = 0 configure:5795: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5795: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | #include configure:5820: result: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E configure:5840: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp configure:5840: $? = 0 configure:5854: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5854: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | #include configure:6461: checking how to get verbose linking output from configure:6471: -c conftest.f >&5 ./configure: line 2067: -c: command not found configure:6471: $? = 127 configure: failed program was: | program main | | end configure:6566: WARNING: compilation failed configure:6572: result: configure:6574: checking for Fortran 77 libraries of configure:6597: -o conftest conftest.f ./configure: line 6602: -o: command not found configure:6793: result: configure:6808: checking how to get verbose linking output from configure:6818: -c conftest.f >&5 ./configure: line 2029: -c: command not found configure:6818: $? = 127 configure: failed program was: | program main | | end configure:6913: WARNING: compilation failed configure:6919: result: configure:6921: checking for Fortran libraries of configure:6944: -o conftest conftest.f ./configure: line 6949: -o: command not found configure:7140: result: configure:7173: checking for known C compilers configure:7194: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -g -O2 conftest.c >&5 conftest.c:13:4: error: unknown type name 'choke' choke me ^ conftest.c:13:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:7194: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:7214: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -g -O2 conftest.c >&5 configure:7214: $? = 0 configure:7608: result: Clang configure:7616: checking for known compiler/OS combinations configure:7695: result: Clang:x86_64 configure:7709: checking for known c++ compilers configure:7730: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -g -O2 conftest.cpp >&5 conftest.cpp:13:4: error: unknown type name 'choke' choke me ^ conftest.cpp:13:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:7730: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:7750: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -g -O2 conftest.cpp >&5 configure:7750: $? = 0 configure:8167: result: Clang configure:8175: checking for known compiler/CPU/OS combinations configure:8242: result: Clang:darwin14.5.0:x86_64 configure:9036: checking whether make supports nested variables configure:9053: result: yes configure:9066: checking whether ln -s works configure:9070: result: yes configure:9077: checking whether make sets $(MAKE) configure:9099: result: yes configure:9189: checking how to print strings configure:9216: result: printf configure:9237: checking for a sed that does not truncate output configure:9301: result: sed configure:9319: checking for grep that handles long lines and -e configure:9377: result: /usr/bin/grep configure:9382: checking for egrep configure:9444: result: /usr/bin/grep -E configure:9449: checking for fgrep configure:9511: result: /usr/bin/grep -F configure:9546: checking for ld used by /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc configure:9613: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:9620: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:9635: result: no configure:9647: checking for BSD- or MS-compatible name lister (nm) configure:9701: result: /usr/bin/nm configure:9831: checking the name lister (/usr/bin/nm) interface configure:9838: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:9841: /usr/bin/nm "conftest.o" configure:9844: output 0000000000000000 S _some_variable configure:9851: result: BSD nm configure:9855: checking the maximum length of command line arguments configure:9986: result: 196608 configure:10034: checking how to convert x86_64-apple-darwin14.5.0 file names to x86_64-apple-darwin14.5.0 format configure:10074: result: func_convert_file_noop configure:10081: checking how to convert x86_64-apple-darwin14.5.0 file names to toolchain format configure:10101: result: func_convert_file_noop configure:10108: checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files configure:10115: result: -r configure:10189: checking for objdump configure:10219: result: no configure:10248: checking how to recognize dependent libraries configure:10448: result: pass_all configure:10533: checking for dlltool configure:10563: result: no configure:10593: checking how to associate runtime and link libraries configure:10620: result: printf %s\n configure:10680: checking for ar configure:10696: found /usr/bin/ar configure:10707: result: ar configure:10744: checking for archiver @FILE support configure:10761: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:10761: $? = 0 configure:10764: ar cru libconftest.a @conftest.lst >&5 ar: @conftest.lst: No such file or directory configure:10767: $? = 1 configure:10787: result: no configure:10845: checking for strip configure:10861: found /usr/bin/strip configure:10872: result: strip configure:10944: checking for ranlib configure:10960: found /usr/bin/ranlib configure:10971: result: ranlib configure:11073: checking command to parse /usr/bin/nm output from /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc object configure:11226: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:11229: $? = 0 configure:11233: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:11236: $? = 0 cannot find nm_test_var in conftest.nm configure:11226: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:11229: $? = 0 configure:11233: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:11236: $? = 0 configure:11302: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c conftstm.o >&5 configure:11305: $? = 0 configure:11343: result: ok configure:11390: checking for sysroot configure:11420: result: no configure:11427: checking for a working dd configure:11465: result: /bin/dd configure:11469: checking how to truncate binary pipes configure:11484: result: /bin/dd bs=4096 count=1 configure:11813: checking for mt configure:11843: result: no configure:11863: checking if : is a manifest tool configure:11869: : '-?' configure:11877: result: no configure:11933: checking for dsymutil configure:11949: found /usr/bin/dsymutil configure:11960: result: dsymutil configure:12025: checking for nmedit configure:12041: found /usr/bin/nmedit configure:12052: result: nmedit configure:12117: checking for lipo configure:12133: found /usr/bin/lipo configure:12144: result: lipo configure:12209: checking for otool configure:12225: found /usr/bin/otool configure:12236: result: otool configure:12301: checking for otool64 configure:12331: result: no configure:12376: checking for -single_module linker flag /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c configure:12409: result: yes configure:12412: checking for -exported_symbols_list linker flag configure:12432: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -Wl,-exported_symbols_list,conftest.sym conftest.c -lc++ >&5 configure:12432: $? = 0 configure:12442: result: yes configure:12445: checking for -force_load linker flag /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -c -o conftest.o conftest.c ar cru libconftest.a conftest.o ranlib libconftest.a /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o conftest conftest.c -Wl,-force_load,./libconftest.a configure:12477: result: yes configure:12550: checking for ANSI C header files configure:12570: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12570: $? = 0 configure:12643: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lc++ >&5 configure:12643: $? = 0 configure:12643: ./conftest configure:12643: $? = 0 configure:12654: result: yes configure:12667: checking for sys/types.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for sys/stat.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for stdlib.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for string.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for memory.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for strings.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for inttypes.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for stdint.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12667: checking for unistd.h configure:12667: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12667: $? = 0 configure:12667: result: yes configure:12681: checking for dlfcn.h configure:12681: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:12681: $? = 0 configure:12681: result: yes configure:12916: checking for objdir configure:12931: result: .libs configure:13195: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc supports -fno-rtti -fno-exceptions configure:13213: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -fno-rtti -fno-exceptions conftest.c >&5 configure:13217: $? = 0 configure:13230: result: yes configure:13588: checking for /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc option to produce PIC configure:13595: result: -fno-common -DPIC configure:13603: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc PIC flag -fno-common -DPIC works configure:13621: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -fno-common -DPIC -DPIC conftest.c >&5 configure:13625: $? = 0 configure:13638: result: yes configure:13667: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc static flag -static works configure:13695: result: no configure:13710: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc supports -c -o file.o configure:13731: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o out/conftest2.o conftest.c >&5 configure:13735: $? = 0 configure:13757: result: yes configure:13765: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc supports -c -o file.o configure:13812: result: yes configure:13845: checking whether the /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:15104: result: yes configure:15344: checking dynamic linker characteristics configure:16162: result: darwin14.5.0 dyld configure:16284: checking how to hardcode library paths into programs configure:16309: result: immediate configure:16354: checking for dlopen in -ldl configure:16379: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -ldl -lc++ >&5 configure:16379: $? = 0 configure:16388: result: yes configure:16611: checking whether a program can dlopen itself configure:16691: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DHAVE_DLFCN_H conftest.c -ldl -lc++ >&5 configure:16694: $? = 0 configure:16712: result: yes configure:16717: checking whether a statically linked program can dlopen itself configure:16797: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DHAVE_DLFCN_H conftest.c -ldl -lc++ >&5 configure:16800: $? = 0 configure:16818: result: yes configure:16857: checking whether stripping libraries is possible configure:16871: result: yes configure:16897: checking if libtool supports shared libraries configure:16899: result: yes configure:16902: checking whether to build shared libraries configure:16927: result: no configure:16930: checking whether to build static libraries configure:16934: result: yes configure:16957: checking how to run the C++ preprocessor configure:17023: result: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E configure:17043: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp configure:17043: $? = 0 configure:17057: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp conftest.cpp:23:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:17057: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:17219: checking for ld used by /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx configure:17286: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:17293: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:17308: result: no configure:17363: checking whether the /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:18436: result: yes configure:18472: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 configure:18475: $? = 0 configure:18956: checking for /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx option to produce PIC configure:18963: result: -fno-common -DPIC configure:18971: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx PIC flag -fno-common -DPIC works configure:18989: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG -fno-common -DPIC -DPIC conftest.cpp >&5 configure:18993: $? = 0 configure:19006: result: yes configure:19029: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx static flag -static works configure:19057: result: no configure:19069: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx supports -c -o file.o configure:19090: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG -o out/conftest2.o conftest.cpp >&5 configure:19094: $? = 0 configure:19116: result: yes configure:19121: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx supports -c -o file.o configure:19168: result: yes configure:19198: checking whether the /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:19238: result: yes configure:19379: checking dynamic linker characteristics configure:20124: result: darwin14.5.0 dyld configure:20189: checking how to hardcode library paths into programs configure:20214: result: immediate configure:26306: checking whether byte ordering is bigendian configure:26321: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:26321: $? = 0 configure:26366: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:26366: $? = 0 configure:26384: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:30:4: error: use of undeclared identifier 'not' not big endian ^ 1 error generated. configure:26384: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:26512: result: no configure:26532: checking if platform is IBM BlueGene configure:26549: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:25:4: error: unknown type name 'choke' choke me ^ conftest.c:25:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:26549: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #ifndef __bg__ | choke me | #endif | int | main () | { | | ; | return 0; | } configure:26554: result: no configure:26562: checking for gunzip configure:26578: found /usr/bin/gunzip configure:26589: result: gunzip -c configure:26599: checking for gzip configure:26626: result: gunzip -c configure:26636: checking for zcat configure:26663: result: gunzip -c configure:26686: checking if C++ compiler supports template class specialization configure:26710: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 configure:26710: $? = 0 configure:26723: result: yes configure:26736: checking if C++ compiler supports template function specialization configure:26761: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 configure:26761: $? = 0 configure:26774: result: yes configure:26794: checking if /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx works configure:26807: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:25:16: warning: private field 'i' is not used [-Wunused-private-field] class Cl { int i; public: Cl(int x) : i(x) {} }; Cl x(5); ^ 1 warning generated. configure:26807: $? = 0 configure:26821: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:30:4: error: unknown type name 'choke' choke me ^ 1 error generated. configure:26821: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | /* end confdefs.h. */ | | int | main () | { | #ifdef __cplusplus | choke me | #endif | ; | return 0; | } configure:26825: result: yes configure:26990: checking for vsnprintf configure:26990: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lc++ >&5 conftest.c:48:6: warning: incompatible redeclaration of library function 'vsnprintf' [-Wincompatible-library-redeclaration] char vsnprintf (); ^ conftest.c:48:6: note: 'vsnprintf' is a builtin with type 'int (char *, unsigned long, const char *, __va_list_tag *)' 1 warning generated. configure:26990: $? = 0 configure:26990: result: yes configure:26999: checking if std::vector has templatized insert method configure:27026: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 configure:27026: $? = 0 configure:27039: result: yes configure:27050: checking if std::copy must be old SGI format configure:27073: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:30:9: warning: unused variable 'b' [-Wunused-variable] int* a, b = std::count(a, a, 5); ^ conftest.cpp:30:24: warning: variable 'a' is uninitialized when used here [-Wuninitialized] int* a, b = std::count(a, a, 5); ^ conftest.cpp:30:7: note: initialize the variable 'a' to silence this warning int* a, b = std::count(a, a, 5); ^ = NULL 2 warnings generated. configure:27073: $? = 0 configure:27086: result: no configure:27100: checking for inttypes.h configure:27100: result: yes configure:27108: checking for stdint.h configure:27108: result: yes configure:27116: checking for sys/types.h configure:27116: result: yes configure:27124: checking stddef.h usability configure:27124: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:27124: $? = 0 configure:27124: result: yes configure:27124: checking stddef.h presence configure:27124: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c configure:27124: $? = 0 configure:27124: result: yes configure:27124: checking for stddef.h configure:27124: result: yes configure:27132: checking for stdlib.h configure:27132: result: yes configure:27145: checking size of void * configure:27150: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lc++ >&5 configure:27150: $? = 0 configure:27150: ./conftest configure:27150: $? = 0 configure:27164: result: 8 configure:27210: checking for size_t configure:27210: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:27210: $? = 0 configure:27210: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:68:21: error: expected expression if (sizeof ((size_t))) ^ 1 error generated. configure:27210: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:27210: result: yes configure:27256: checking for ptrdiff_t configure:27256: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:27256: $? = 0 configure:27256: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:69:24: error: expected expression if (sizeof ((ptrdiff_t))) ^ 1 error generated. configure:27256: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:27256: result: yes configure:27346: checking for compress in -lz configure:27371: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lz -lc++ >&5 configure:27371: $? = 0 configure:27380: result: yes configure:27386: checking for dlopen in -ldl configure:27420: result: yes configure:27426: checking for pow in -lm configure:27451: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lm -lc++ -lz -ldl >&5 conftest.c:41:6: warning: incompatible redeclaration of library function 'pow' [-Wincompatible-library-redeclaration] char pow (); ^ conftest.c:41:6: note: 'pow' is a builtin with type 'double (double, double)' 1 warning generated. configure:27451: $? = 0 configure:27460: result: yes configure:27516: checking size of EntityHandle configure:27518: result: 8 configure:27529: checking if iGeom support is to be built configure:27531: result: no configure:27550: checking if iMesh support is to be built configure:27552: result: no configure:27619: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:780: creating libtool configure:29680: checking ieeefp.h usability configure:29680: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:72:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:29680: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29680: result: no configure:29680: checking ieeefp.h presence configure:29680: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:39:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:29680: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | /* end confdefs.h. */ | #include configure:29680: result: no configure:29680: checking for ieeefp.h configure:29680: result: no configure:29729: checking for C++ unordered_map configure:29752: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:39:10: fatal error: 'unordered_map' file not found #include ^ 1 error generated. configure:29752: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | /* end confdefs.h. */ | #include | int | main () | { | std::unordered_map map | ; | return 0; | } configure:29768: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG conftest.cpp >&5 configure:29768: $? = 0 configure:29797: result: std::tr1 configure:29835: checking mpi.h usability configure:29835: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:29835: $? = 0 configure:29835: result: yes configure:29835: checking mpi.h presence configure:29835: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c configure:29835: $? = 0 configure:29835: result: yes configure:29835: checking for mpi.h configure:29835: result: yes configure:29850: checking If mpi.h conflicts with C headers in C++ configure:29870: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E conftest.cpp configure:29870: $? = 0 configure:29871: result: no configure:30182: checking for mpiexec configure:30198: found /Users/ihabia/src2/mpich-3.2/mpich3/bin//mpiexec configure:30209: result: mpiexec configure:30274: checking for known MPI family and version configure:30293: result: MPICH-3 configure:30465: checking for deflate in -lz configure:30490: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lz -lc++ -lz -ldl -lm >&5 configure:30490: $? = 0 configure:30499: result: yes configure:30535: checking for SZ_Decompress in -lsz configure:30560: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lsz -lc++ -lz -ldl -lm >&5 ld: library not found for -lsz clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30560: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Decompress (); | int | main () | { | return SZ_Decompress (); | ; | return 0; | } configure:30569: result: no configure:30605: checking if HDF5 support is enabled configure:30621: result: yes configure:30653: checking for gpfs_stat in -lgpfs configure:30678: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lgpfs -lc++ -lz -ldl -lm >&5 ld: library not found for -lgpfs clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30678: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char gpfs_stat (); | int | main () | { | return gpfs_stat (); | ; | return 0; | } configure:30687: result: no configure:30706: checking hdf5.h usability configure:30706: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -I/Users/ihabia/src2/hdf5-1.8.16/hdf5//include -isystem /Users/ihabia/src2/hdf5-1.8.16/hdf5//include conftest.c >&5 configure:30706: $? = 0 configure:30706: result: yes configure:30706: checking hdf5.h presence configure:30706: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E -I/Users/ihabia/src2/hdf5-1.8.16/hdf5//include -isystem /Users/ihabia/src2/hdf5-1.8.16/hdf5//include conftest.c configure:30706: $? = 0 configure:30706: result: yes configure:30706: checking for hdf5.h configure:30706: result: yes configure:30732: checking for H5Fopen in -lhdf5 configure:30757: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -I/Users/ihabia/src2/hdf5-1.8.16/hdf5//include -isystem /Users/ihabia/src2/hdf5-1.8.16/hdf5//include -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lhdf5 -lc++ -lz -ldl -lm -lc++ -lz -ldl -lm >&5 configure:30757: $? = 0 configure:30767: result: yes configure:30879: checking for H5Pset_fapl_mpio in -lhdf5 configure:30905: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lhdf5 -lhdf5 -lc++ -lz -ldl -lm -lc++ -lz -ldl -lm -lc++ -lz -ldl -lm >&5 configure:30905: $? = 0 configure:30914: result: yes configure:30939: checking for H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS configure:30957: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E -I/Users/ihabia/src2/hdf5-1.8.16/hdf5//include -isystem /Users/ihabia/src2/hdf5-1.8.16/hdf5//include conftest.c configure:30957: $? = 0 configure:30958: result: yes configure:30976: checking if CCMIO support is enabled configure:30990: result: yes configure:30998: checking if CCMIO support available configure:31000: result: configure:31032: checking ccmio.h usability configure:31032: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:31032: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31032: result: no configure:31032: checking ccmio.h presence configure:31032: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:31032: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31032: result: no configure:31032: checking for ccmio.h configure:31032: result: no configure:31046: checking ccmioutility.h usability configure:31046: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:31046: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31046: result: no configure:31046: checking ccmioutility.h presence configure:31046: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:31046: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31046: result: no configure:31046: checking for ccmioutility.h configure:31046: result: no configure:31060: checking ccmiocore.h usability configure:31060: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:31060: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31060: result: no configure:31060: checking ccmiocore.h presence configure:31060: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:31060: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31060: result: no configure:31060: checking for ccmiocore.h configure:31060: result: no configure:31079: checking unsuccessful, Ccmio support disabled configure:31081: result: configure:31119: checking if DAMSEL support is enabled configure:31136: result: no configure:31141: checking if DAMSEL support available configure:31143: result: configure:31264: checking if Pnetcdf support is enabled configure:31267: result: yes configure:31311: checking pnetcdf.h usability configure:31311: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'pnetcdf.h' file not found #include ^ 1 error generated. configure:31311: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31311: result: no configure:31311: checking pnetcdf.h presence configure:31311: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'pnetcdf.h' file not found #include ^ 1 error generated. configure:31311: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31311: result: no configure:31311: checking for pnetcdf.h configure:31311: result: no configure:31375: checking for ncmpi_create in -lpnetcdf configure:31400: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lpnetcdf -lc++ -lz -ldl -lm >&5 ld: library not found for -lpnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31400: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char ncmpi_create (); | int | main () | { | return ncmpi_create (); | ; | return 0; | } configure:31409: result: no configure:31459: checking if NetCDF support is enabled configure:31473: result: yes configure:31505: checking for nc-config configure:31536: result: no configure:31553: WARNING: "NetCDF configuration utility not found" configure:31571: checking netcdf.h usability configure:31571: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'netcdf.h' file not found #include ^ 1 error generated. configure:31571: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31571: result: no configure:31571: checking netcdf.h presence configure:31571: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'netcdf.h' file not found #include ^ 1 error generated. configure:31571: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31571: result: no configure:31571: checking for netcdf.h configure:31571: result: no configure:31629: WARNING: NetCDF header not found. configure:31638: checking for nc_create in -lnetcdf configure:31663: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lnetcdf -lc++ -lz -ldl -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31663: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | int | main () | { | return nc_create (); | ; | return 0; | } configure:31672: result: no configure:31791: checking for nc_create in -lnetcdf configure:31816: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lc++ -lz -ldl -lm -lc++ -lz -ldl -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31816: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | int | main () | { | return nc_create (); | ; | return 0; | } configure:31825: result: no configure:31834: checking for nc_create in -lnetcdf configure:31859: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lc++ -lz -ldl -lm -lcurl -lc++ -lz -ldl -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31859: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | int | main () | { | return nc_create (); | ; | return 0; | } configure:31868: result: no configure:31894: WARNING: "NetCDF support disabled" configure:31930: checking if CGNS support is enabled configure:31944: result: yes configure:31987: checking cgnslib.h usability configure:31987: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:79:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:31987: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31987: result: no configure:31987: checking cgnslib.h presence configure:31987: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E conftest.c conftest.c:46:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:31987: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | #include configure:31987: result: no configure:31987: checking for cgnslib.h configure:31987: result: no configure:31991: WARNING: CGNS header not found. configure:31998: checking for cg_open in -lcgns configure:32023: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lcgns -lc++ -lz -ldl -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:32023: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:32032: result: no configure:32151: checking for cg_open in -lcgns configure:32176: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lc++ -lz -ldl -lm -lc++ -lz -ldl -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:32176: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:32185: result: no configure:32194: checking for cg_open in -lcgns configure:32219: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lc++ -lz -ldl -lm -lcurl -lc++ -lz -ldl -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:32219: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.8.2" | #define PACKAGE_STRING "MOAB 4.8.2" | #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" | #define PACKAGE_URL "http://sigma.mcs.anl.gov" | #define PACKAGE "moab" | #define VERSION "4.8.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TEMPLATE_SPECIALIZATION 1 | #define TEMPLATE_FUNC_SPECIALIZATION 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define SIZEOF_VOID_P 8 | #define HAVE_SIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define VERSION "4.8.2" | #define VERSION_MAJOR 4 | #define VERSION_MINOR 8 | #define VERSION_PATCH 2 | #define VERSION_STRING "MOAB 4.8.2" | #define UNORDERED_MAP_NS std::tr1 | #define HAVE_UNORDERED_MAP tr1/unordered_map | #define HAVE_UNORDERED_SET tr1/unordered_set | #define HAVE_MPI 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_HDF5_PARALLEL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | int | main () | { | return cg_open (); | ; | return 0; | } configure:32228: result: no configure:32254: WARNING: "CGNS support disabled" configure:32353: checking for doxygen configure:32386: result: no configure:33322: checking if mbconvert is to be built configure:33324: result: yes configure:33354: checking if hexmodops is to be built configure:33356: result: yes configure:33386: checking if qvdual is to be built configure:33388: result: no configure:33418: checking if vtkMOABReader is to be built configure:33420: result: no configure:33450: checking if mbsize is to be built configure:33452: result: yes configure:33482: checking if mbskin is to be built configure:33484: result: yes configure:33514: checking if mbtagprop is to be built configure:33516: result: yes configure:33546: checking if mbmem is to be built configure:33548: result: yes configure:33578: checking if spheredecomp is to be built configure:33580: result: yes configure:33610: checking if mbsurfplot is to be built configure:33612: result: yes configure:33679: checking if mbpart is to be built configure:33681: result: no configure:33713: checking if dagmc is to be built configure:33715: result: no configure:33750: checking if gsets is to be built configure:33752: result: yes configure:33782: checking if mbdepth is to be built configure:33784: result: yes configure:33815: checking if mbcoupler is to be built configure:33817: result: no configure:33847: checking if mcnpmit is to be built configure:33849: result: no configure:33879: checking if refiner is to be built configure:33881: result: no configure:34010: checking if h5mtools is to be built configure:34012: result: yes configure:34042: checking if mbcslam is to be built configure:34044: result: no configure:34074: checking if ahf is to be built configure:34076: result: no configure:34106: checking if mbquality is to be built configure:34108: result: yes configure:34138: checking if mbumr is to be built configure:34140: result: yes configure:37028: checking that generated files are newer than configure configure:37034: result: done configure:37254: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by MOAB config.status 4.8.2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on dlm249-189.unibg.it config.status:1504: creating Makefile config.status:1504: creating moab.make config.status:1504: creating MOABConfig.cmake config.status:1504: creating examples/makefile config.status:1504: creating examples/old/deform_mesh/makefile config.status:1504: creating src/Makefile config.status:1504: creating src/io/Makefile config.status:1504: creating src/io/mhdf/Makefile config.status:1504: creating src/LocalDiscretization/Makefile config.status:1504: creating src/RefineMesh/Makefile config.status:1504: creating src/parallel/Makefile config.status:1504: creating src/verdict/Makefile config.status:1504: creating test/Makefile config.status:1504: creating test/dagmc/Makefile config.status:1504: creating test/h5file/Makefile config.status:1504: creating test/dual/Makefile config.status:1504: creating test/obb/Makefile config.status:1504: creating test/perf/Makefile config.status:1504: creating test/perf/point_location/Makefile config.status:1504: creating test/io/Makefile config.status:1504: creating test/parallel/Makefile config.status:1504: creating itaps/iBase_f.h config.status:1504: creating itaps/Makefile config.status:1504: creating itaps/imesh/Makefile config.status:1504: creating itaps/imesh/iMesh-Defs.inc config.status:1504: creating itaps/igeom/Makefile config.status:1504: creating itaps/igeom/FBiGeom-Defs.inc config.status:1504: creating tools/Makefile config.status:1504: creating tools/refiner/Makefile config.status:1504: creating tools/mbcoupler/Makefile config.status:1504: creating tools/mbcslam/Makefile config.status:1504: creating tools/mcnpmit/Makefile config.status:1504: creating tools/qvdual/Makefile config.status:1504: creating tools/dagmc/Makefile config.status:1504: creating tools/vtkMOABReader/CMakeLists.txt config.status:1504: creating doc/user.dox config.status:1504: creating doc/config.tex config.status:1504: creating MeshFiles/Makefile config.status:1504: creating MeshFiles/unittest/Makefile config.status:1504: creating MeshFiles/unittest/io/Makefile config.status:1504: creating MeshFiles/unittest/iGeom/Makefile config.status:1504: creating MeshFiles/unittest/dagmc/Makefile config.status:1504: creating MeshFiles/unittest/mbcslam/Makefile config.status:1504: creating MeshFiles/unittest/h5file/Makefile config.status:1504: creating MeshFiles/examples/Makefile config.status:1504: creating src/moab/Version.h config.status:1685: src/moab/Version.h is unchanged config.status:1504: creating src/moab/EntityHandle.hpp config.status:1685: src/moab/EntityHandle.hpp is unchanged config.status:1504: creating src/parallel/moab_mpi_config.h config.status:1685: src/parallel/moab_mpi_config.h is unchanged config.status:1504: creating src/FCDefs.h config.status:1685: src/FCDefs.h is unchanged config.status:1504: creating src/moab/MOABConfig.h config.status:1733: executing depfiles commands config.status:1733: executing libtool commands config.status:1733: executing src/moab/MOABConfig.h commands config.status:2881: creating src/moab/MOABConfig.h - prefix MOAB for src/moab/MOABConfig.h defines config.status:1733: executing src/MOAB_FCDefs.h commands configure:40286: result: C: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG configure:40288: result: C++: /Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG configure:40317: WARNING: ************************************************************************* * MOAB has been configured w/out the NetCDF library. * Support for ExodusII/Genesis and other file formats is disabled! ************************************************************************* ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-apple-darwin14.5.0 ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPIEXEC_NP_set= ac_cv_env_MPIEXEC_NP_value= ac_cv_env_MPIEXEC_set= ac_cv_env_MPIEXEC_value= ac_cv_env_NP_set= ac_cv_env_NP_value= ac_cv_env_QTDIR_set= ac_cv_env_QTDIR_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_libs= ac_cv_fc_libs= ac_cv_func_vsnprintf=yes ac_cv_header_ccmio_h=no ac_cv_header_ccmiocore_h=no ac_cv_header_ccmioutility_h=no ac_cv_header_cgnslib_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_mpi_h=yes ac_cv_header_netcdf_h=no ac_cv_header_pnetcdf_h=no ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-apple-darwin14.5.0 ac_cv_lib_cgns_cg_open=no ac_cv_lib_dl_dlopen=yes ac_cv_lib_gpfs_gpfs_stat=no ac_cv_lib_hdf5_H5Pset_fapl_mpio=yes ac_cv_lib_hdf5___H5Fopen=yes ac_cv_lib_m_pow=yes ac_cv_lib_netcdf_nc_create=no ac_cv_lib_pnetcdf_ncmpi_create=no ac_cv_lib_sz_SZ_Decompress=no ac_cv_lib_z_compress=yes ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_NC_CONFIG=no ac_cv_path_SED=sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/bin/dd ac_cv_prog_AWK=awk ac_cv_prog_CPP='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E' ac_cv_prog_CXXCPP='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E' ac_cv_prog_MPIEXEC=mpiexec ac_cv_prog_SED=sed ac_cv_prog_ZCAT='gunzip -c' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc ac_cv_prog_ac_ct_DSYMUTIL=dsymutil ac_cv_prog_ac_ct_LIPO=lipo ac_cv_prog_ac_ct_NMEDIT=nmedit ac_cv_prog_ac_ct_OTOOL=otool ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_make_make_set=yes ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-apple-darwin14.5.0 ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes fathom_cv_std_count_old_sgi=no fathom_cv_std_vector_templatized_insert=yes lt_cv_apple_cc_single_mod=yes lt_cv_ar_at_file=no lt_cv_deplibs_check_method=pass_all lt_cv_dlopen=dlopen lt_cv_dlopen_libs=-ldl lt_cv_dlopen_self=yes lt_cv_dlopen_self_static=yes lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_exported_symbols_list=yes lt_cv_ld_force_load=yes lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_LDCXX=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_NM=/usr/bin/nm lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_pic='-fno-common -DPIC' lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_gnu_ld=no lt_cv_prog_gnu_ldcxx=no lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST][BCDEGRST]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=196608 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' mk_cv_cxx_unordered_map=std::tr1 snl_cv_template_func_specialization=yes snl_cv_template_specialization=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CFLAGS='' AM_CPPFLAGS=' -I/Users/ihabia/src2/hdf5-1.8.16/hdf5//include -isystem /Users/ihabia/src2/hdf5-1.8.16/hdf5//include ' AM_CXXFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_FCFLAGS='' AM_FFLAGS='' AM_LDFLAGS=' -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/missing autoconf' AUTOHEADER='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/missing autoheader' AUTOMAKE='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/missing automake-1.15' AWK='awk' CC='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc' CCDEPMODE='depmode=gcc3' CCMIO_LIBS='' CFLAGS=' -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG' CGM_CPPFLAGS='' CGM_DIR='' CGM_LDFLAGS='' CGM_LIBS='' CGM_LTFLAGS='' CGNS_LIBS='' CPP='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc -E' CPPFLAGS='' CXX='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx' CXXCPP='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -stdlib=libstdc++ -O2 -DNDEBUG' CXX_LDFLAGS=' -stdlib=libstdc++' CYGPATH_W='echo' DAGMC_LIBS='' DAMSEL_LIBS='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DISTCHECK_CONFIGURE_FLAGS=' --enable-fortran=no --with-mpi="/Users/ihabia/src2/mpich-3.2/mpich3/" --enable-debug=no --enable-optimize=yes --enable-32bit=no --enable-64bit=no --enable-imesh=no --enable-igeom=no --with-hdf5="/Users/ihabia/src2/hdf5-1.8.16/hdf5/" --enable-mbconvert="yes" --enable-hexmodops="yes" --enable-qvdual="no" --enable-vtkMOABReader="no" --enable-mbsize="yes" --enable-mbskin="yes" --enable-mbtagprop="yes" --enable-mbmem="yes" --enable-spheredecomp="yes" --enable-mbsurfplot="yes" --enable-mbpart="no" --enable-dagmc="no" --enable-gsets="yes" --enable-mbdepth="yes" --enable-mbcoupler="no" --enable-mcnpmit="no" --enable-refiner="no" --enable-h5mtools="yes" --enable-mbcslam="no" --enable-ahf="no" --enable-mbquality="yes" --enable-mbumr="yes" CC="/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc" CXX="/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicxx" LDFLAGS=" -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib" LIBS=" -lc++ -lz -ldl -lm"' DLLTOOL='false' DOXYGEN='no' DSYMUTIL='dsymutil' DUMPBIN='' ECHO_C='\c' ECHO_N='' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLE_AHF_FALSE='' ENABLE_AHF_TRUE='#' ENABLE_DOCS_FALSE='' ENABLE_DOCS_TRUE='#' ENABLE_FORTRAN='no' ENABLE_FORTRAN_FALSE='' ENABLE_FORTRAN_TRUE='#' ENABLE_ahf_FALSE='' ENABLE_ahf_TRUE='#' ENABLE_dagmc_FALSE='' ENABLE_dagmc_TRUE='#' ENABLE_gsets_FALSE='#' ENABLE_gsets_TRUE='' ENABLE_h5mtools_FALSE='#' ENABLE_h5mtools_TRUE='' ENABLE_hexmodops_FALSE='#' ENABLE_hexmodops_TRUE='' ENABLE_igeom_FALSE='' ENABLE_igeom_TRUE='#' ENABLE_imesh_FALSE='' ENABLE_imesh_TRUE='#' ENABLE_mbconvert_FALSE='#' ENABLE_mbconvert_TRUE='' ENABLE_mbcoupler_FALSE='' ENABLE_mbcoupler_TRUE='#' ENABLE_mbcslam_FALSE='' ENABLE_mbcslam_TRUE='#' ENABLE_mbdepth_FALSE='#' ENABLE_mbdepth_TRUE='' ENABLE_mbmem_FALSE='#' ENABLE_mbmem_TRUE='' ENABLE_mbpart_FALSE='' ENABLE_mbpart_TRUE='#' ENABLE_mbquality_FALSE='#' ENABLE_mbquality_TRUE='' ENABLE_mbsize_FALSE='#' ENABLE_mbsize_TRUE='' ENABLE_mbskin_FALSE='#' ENABLE_mbskin_TRUE='' ENABLE_mbsurfplot_FALSE='#' ENABLE_mbsurfplot_TRUE='' ENABLE_mbtagprop_FALSE='#' ENABLE_mbtagprop_TRUE='' ENABLE_mbumr_FALSE='#' ENABLE_mbumr_TRUE='' ENABLE_mcnpmit_FALSE='' ENABLE_mcnpmit_TRUE='#' ENABLE_metis_FALSE='' ENABLE_metis_TRUE='#' ENABLE_parmetis_FALSE='' ENABLE_parmetis_TRUE='#' ENABLE_qvdual_FALSE='' ENABLE_qvdual_TRUE='#' ENABLE_refiner_FALSE='' ENABLE_refiner_TRUE='#' ENABLE_spheredecomp_FALSE='#' ENABLE_spheredecomp_TRUE='' ENABLE_vtkMOABReader_FALSE='' ENABLE_vtkMOABReader_TRUE='#' EXEEXT='' EXPORT_LDFLAGS=' -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib' EXPORT_LTFLAGS='' F77='' FC='' FCFLAGS=' ' FCLIBS='' FFLAGS=' ' FGREP='/usr/bin/grep -F' FLIBS='' GREP='/usr/bin/grep' HAVE_CCMIO_FALSE='' HAVE_CCMIO_TRUE='#' HAVE_CGM_FALSE='' HAVE_CGM_TRUE='#' HAVE_CGNS_FALSE='' HAVE_CGNS_TRUE='#' HAVE_DAMSEL_FALSE='' HAVE_DAMSEL_TRUE='#' HAVE_HDF5_FALSE='#' HAVE_HDF5_PARALLEL_FALSE='#' HAVE_HDF5_PARALLEL_TRUE='' HAVE_HDF5_TRUE='' HAVE_IEEEFP_H_FALSE='#' HAVE_IEEEFP_H_TRUE='' HAVE_MPI_FALSE='#' HAVE_MPI_TRUE='' HAVE_NETCDF_FALSE='' HAVE_NETCDF_TRUE='#' HAVE_PNETCDF_FALSE='' HAVE_PNETCDF_TRUE='#' HAVE_VALGRIND_FALSE='#' HAVE_VALGRIND_TRUE='' HAVE_ZCAT_FALSE='' HAVE_ZCAT_TRUE='#' HAVE_ZOLTAN_FALSE='' HAVE_ZOLTAN_TRUE='#' HDF5_LIBS='-lhdf5 -lc++ -lz -ldl -lm' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld' LDFLAGS=' -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib -L/Users/ihabia/src2/hdf5-1.8.16/hdf5//lib' LIBOBJS='' LIBS=' -lc++ -lz -ldl -lm' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='lipo' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/missing makeinfo' MANIFEST_TOOL=':' METIS_INC_FLAGS='' METIS_LIBS='' MKDIR_P='config/install-sh -c -d' MOAB_CXX_LIBS='' MOAB_CXX_LINKFLAGS='' MOC='' MPE_LIBS='' MPIEXEC='mpiexec' MPIEXEC_NP='-np' MPITYPE='MPICH-3' NC_CONFIG='no' NETCDF_CPPFLAGS='' NETCDF_LDFLAGS='' NETCDF_LIBS='' NETCDF_VERSION='' NM='/usr/bin/nm' NMEDIT='nmedit' NP='2' OBJDUMP='false' OBJEXT='o' OTOOL64=':' OTOOL='otool' PACKAGE='moab' PACKAGE_BUGREPORT='moab-dev@mcs.anl.gov' PACKAGE_NAME='MOAB' PACKAGE_STRING='MOAB 4.8.2' PACKAGE_TARNAME='moab' PACKAGE_URL='http://sigma.mcs.anl.gov' PACKAGE_VERSION='4.8.2' PARALLEL_FALSE='#' PARALLEL_TRUE='' PARMETIS_INC_FLAGS='' PARMETIS_LIBS='' PATH_SEPARATOR=':' PNETCDF_LIBS='' QTDIR='' QVDUAL_INCLUDES='' QVDUAL_LIBS='' RANLIB='ranlib' SED='sed' SET_MAKE='' SHELL='/bin/sh' SIZEOF_VOID_P='8' STRIP='strip' UIC='' USER_CONFIGURE_CMD='./configure '\''--disable-fortran'\'' '\''--disable-imesh'\'' '\''--with-mpi=/Users/ihabia/src2/mpich-3.2/mpich3/'\'' '\''--with-hdf5=/Users/ihabia/src2/hdf5-1.8.16/hdf5/'\'' '\''--prefix=/Users/ihabia/src2/moab-4.8.2/moab/'\''' USE_MPIEXEC_FALSE='#' USE_MPIEXEC_TRUE='' VERSION='4.8.2' VTK_INCLUDES='' VTK_INC_DIR='' VTK_LIBS='' VTK_LIB_DIR='' WITH_MPE='no' XMKMF='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ZCAT='gunzip -c' ZOLTAN_INC_FLAGS='' ZOLTAN_LIBS='' ZOLTAN_LIB_FLAGS='' ac_ct_AR='ar' ac_ct_CC='/Users/ihabia/src2/mpich-3.2/mpich3//bin/mpicc' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-apple-darwin14.5.0' build_alias='' build_cpu='x86_64' build_os='darwin14.5.0' build_vendor='apple' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' examplesdir='${datadir}/examples' exec_prefix='${prefix}' host='x86_64-apple-darwin14.5.0' host_alias='' host_cpu='x86_64' host_os='darwin14.5.0' host_vendor='apple' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /Users/ihabia/src2/moab-4.8.2/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/Users/ihabia/src2/moab-4.8.2/moab' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-apple-darwin14.5.0' target_alias='' target_cpu='x86_64' target_os='darwin14.5.0' target_vendor='apple' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "MOAB" #define PACKAGE_TARNAME "moab" #define PACKAGE_VERSION "4.8.2" #define PACKAGE_STRING "MOAB 4.8.2" #define PACKAGE_BUGREPORT "moab-dev@mcs.anl.gov" #define PACKAGE_URL "http://sigma.mcs.anl.gov" #define PACKAGE "moab" #define VERSION "4.8.2" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define TEMPLATE_SPECIALIZATION 1 #define TEMPLATE_FUNC_SPECIALIZATION 1 #define HAVE_VSNPRINTF 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define SIZEOF_VOID_P 8 #define HAVE_SIZE_T 1 #define HAVE_PTRDIFF_T 1 #define VERSION "4.8.2" #define VERSION_MAJOR 4 #define VERSION_MINOR 8 #define VERSION_PATCH 2 #define VERSION_STRING "MOAB 4.8.2" #define UNORDERED_MAP_NS std::tr1 #define HAVE_UNORDERED_MAP tr1/unordered_map #define HAVE_UNORDERED_SET tr1/unordered_set #define HAVE_MPI 1 #define HAVE_HDF5_H 1 #define HAVE_HDF5 1 #define HAVE_HDF5_PARALLEL 1 #define HAVE_MBCONVERT 1 #define HAVE_HEXMODOPS 1 #define HAVE_MBSIZE 1 #define HAVE_MBSKIN 1 #define HAVE_MBTAGPROP 1 #define HAVE_MBMEM 1 #define HAVE_SPHEREDECOMP 1 #define HAVE_MBSURFPLOT 1 #define HAVE_GSETS 1 #define HAVE_MBDEPTH 1 #define HAVE_H5MTOOLS 1 #define HAVE_MBQUALITY 1 #define HAVE_MBUMR 1 #define CONFIGURE_INFO "./configure run on Wed Dec 2 13:59:09 CET 2015" #define CONFIGURE_COMMAND "./configure '--disable-fortran' '--disable-imesh' '--with-mpi=/Users/ihabia/src2/mpich-3.2/mpich3/' '--with-hdf5=/Users/ihabia/src2/hdf5-1.8.16/hdf5/' '--prefix=/Users/ihabia/src2/moab-4.8.2/moab/'" configure: exit 0