This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by MOAB configure 4.6.3, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --disable-fortran --disable-imesh --with-mpi=/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/ --with-hdf5=/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5 --disable-mbzoltan --prefix=/galileo/home/userexternal/lbotti00/moab ## --------- ## ## Platform. ## ## --------- ## hostname = node165 uname -m = x86_64 uname -r = 3.10.0-123.20.1.el7.x86_64 uname -s = Linux uname -v = #1 SMP Thu Jan 29 18:05:33 UTC 2015 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /cineca/prod/compilers/gnu/4.9.2/none/bin PATH: /cineca/prod/libraries/hdf5/1.8.14_par/intelmpi--5.0.2--binary/bin PATH: /cineca/prod/libraries/petsc/3.5.2/intelmpi--5.0.2--binary/bin PATH: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin PATH: /cineca/prod/compilers/intel/cs-xe-2015/binary/inspector_xe/bin64 PATH: /cineca/prod/compilers/intel/cs-xe-2015/binary/bin PATH: /cineca/bin PATH: /usr/lib64/qt-3.3/bin PATH: /galileo/cineca/sysprod/pbs/default/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /galileo/home/userexternal/lbotti00/.local/bin PATH: /galileo/home/userexternal/lbotti00/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3262: checking build system type configure:3276: result: x86_64-unknown-linux-gnu configure:3296: checking host system type configure:3309: result: x86_64-unknown-linux-gnu configure:3329: checking target system type configure:3342: result: x86_64-unknown-linux-gnu configure:3385: checking for a BSD-compatible install configure:3453: result: /usr/bin/install -c configure:3464: checking whether build environment is sane configure:3519: result: yes configure:3670: checking for a thread-safe mkdir -p configure:3709: result: /usr/bin/mkdir -p configure:3716: checking for gawk configure:3732: found /usr/bin/gawk configure:3743: result: gawk configure:3754: checking whether make sets $(MAKE) configure:3776: result: yes configure:3805: checking whether make supports nested variables configure:3822: result: yes configure:3909: checking for sed configure:3925: found /usr/bin/sed configure:3937: result: sed configure:3973: checking for style of include used by make configure:4001: result: GNU configure:4630: checking for gcc configure:4657: result: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc configure:4886: checking for C compiler version configure:4895: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc --version >&5 icc (ICC) 15.0.2 20150121 Copyright (C) 1985-2015 Intel Corporation. All rights reserved. configure:4906: $? = 0 configure:4895: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -v >&5 mpiicc for the Intel(R) MPI Library 5.0 Update 2 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved. icc version 15.0.2 (gcc version 4.9.0 compatibility) configure:4906: $? = 0 configure:4895: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -V >&5 GNU ld version 2.23.52.0.1-16.el7 20130226 Intel(R) C Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.2.164 Build 20150121 Copyright (C) 1985-2015 Intel Corporation. All rights reserved. /lib/../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:4906: $? = 1 configure:4895: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' /lib/../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:4906: $? = 1 configure:4926: checking whether the C compiler works configure:4948: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc conftest.c >&5 configure:4952: $? = 0 configure:5000: result: yes configure:5003: checking for C compiler default output file name configure:5005: result: a.out configure:5011: checking for suffix of executables configure:5018: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest conftest.c >&5 configure:5022: $? = 0 configure:5044: result: configure:5066: checking whether we are cross compiling configure:5074: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest conftest.c >&5 configure:5078: $? = 0 configure:5085: ./conftest configure:5089: $? = 0 configure:5104: result: no configure:5109: checking for suffix of object files configure:5131: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c conftest.c >&5 configure:5135: $? = 0 configure:5156: result: o configure:5160: checking whether we are using the GNU C compiler configure:5179: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c conftest.c >&5 configure:5179: $? = 0 configure:5188: result: yes configure:5197: checking whether /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc accepts -g configure:5217: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g conftest.c >&5 configure:5217: $? = 0 configure:5258: result: yes configure:5275: checking for /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc option to accept ISO C89 configure:5338: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:5338: $? = 0 configure:5351: result: none needed configure:5373: checking dependency style of /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc configure:5484: result: gcc3 configure:5505: checking how to run the C preprocessor configure:5536: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c configure:5536: $? = 0 configure:5550: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c conftest.c(11): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:5550: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | /* end confdefs.h. */ | #include configure:5575: result: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E configure:5595: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c configure:5595: $? = 0 configure:5609: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c conftest.c(11): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:5609: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | /* end confdefs.h. */ | #include configure:5750: checking for C++ compiler version configure:5759: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx --version >&5 icpc (ICC) 15.0.2 20150121 Copyright (C) 1985-2015 Intel Corporation. All rights reserved. configure:5770: $? = 0 configure:5759: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -v >&5 mpiicpc for the Intel(R) MPI Library 5.0 Update 2 for Linux* Copyright(C) 2003-2014, Intel Corporation. All rights reserved. icpc version 15.0.2 (gcc version 4.9.0 compatibility) configure:5770: $? = 0 configure:5759: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -V >&5 GNU ld version 2.23.52.0.1-16.el7 20130226 Intel(R) C++ Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 15.0.2.164 Build 20150121 Copyright (C) 1985-2015 Intel Corporation. All rights reserved. /lib/../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:5770: $? = 1 configure:5759: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -qversion >&5 icpc: command line warning #10006: ignoring unknown option '-qversion' /lib/../lib64/crt1.o: In function `_start': (.text+0x20): undefined reference to `main' configure:5770: $? = 1 configure:5774: checking whether we are using the GNU C++ compiler configure:5793: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c conftest.cpp >&5 configure:5793: $? = 0 configure:5802: result: yes configure:5811: checking whether /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx accepts -g configure:5831: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -g conftest.cpp >&5 configure:5831: $? = 0 configure:5872: result: yes configure:5897: checking dependency style of /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx configure:6008: result: gcc3 configure:6028: checking how to run the C++ preprocessor configure:6055: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp configure:6055: $? = 0 configure:6069: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp conftest.cpp(11): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:6069: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | /* end confdefs.h. */ | #include configure:6094: result: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E configure:6114: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp configure:6114: $? = 0 configure:6128: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp conftest.cpp(11): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:6128: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | /* end confdefs.h. */ | #include configure:6601: checking whether ln -s works configure:6605: result: yes configure:6612: checking whether make sets $(MAKE) configure:6634: result: yes configure:6720: checking how to print strings configure:6747: result: printf configure:6768: checking for a sed that does not truncate output configure:6832: result: sed configure:6850: checking for grep that handles long lines and -e configure:6908: result: /usr/bin/grep configure:6913: checking for egrep configure:6975: result: /usr/bin/grep -E configure:6980: checking for fgrep configure:7042: result: /usr/bin/grep -F configure:7077: checking for ld used by /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc configure:7144: result: /usr/bin/ld configure:7151: checking if the linker (/usr/bin/ld) is GNU ld configure:7166: result: yes configure:7178: checking for BSD- or MS-compatible name lister (nm) configure:7227: result: /usr/bin/nm -B configure:7357: checking the name lister (/usr/bin/nm -B) interface configure:7364: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:7367: /usr/bin/nm -B "conftest.o" configure:7370: output 0000000000000000 N .debug_info_seg 0000000000000000 B some_variable configure:7377: result: BSD nm configure:7381: checking the maximum length of command line arguments configure:7511: result: 19200000 configure:7528: checking whether the shell understands some XSI constructs configure:7538: result: yes configure:7542: checking whether the shell understands "+=" configure:7548: result: yes configure:7583: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format configure:7623: result: func_convert_file_noop configure:7630: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format configure:7650: result: func_convert_file_noop configure:7657: checking for /usr/bin/ld option to reload object files configure:7664: result: -r configure:7738: checking for objdump configure:7754: found /usr/bin/objdump configure:7765: result: objdump configure:7797: checking how to recognize dependent libraries configure:7999: result: pass_all configure:8084: checking for dlltool configure:8114: result: no configure:8144: checking how to associate runtime and link libraries configure:8171: result: printf %s\n configure:8232: checking for ar configure:8248: found /usr/bin/ar configure:8259: result: ar configure:8296: checking for archiver @FILE support configure:8313: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:8313: $? = 0 configure:8316: ar cru libconftest.a @conftest.lst >&5 configure:8319: $? = 0 configure:8324: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:8327: $? = 1 configure:8339: result: @ configure:8397: checking for strip configure:8413: found /usr/bin/strip configure:8424: result: strip configure:8496: checking for ranlib configure:8512: found /usr/bin/ranlib configure:8523: result: ranlib configure:8625: checking command to parse /usr/bin/nm -B output from /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc object configure:8745: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:8748: $? = 0 configure:8752: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8755: $? = 0 configure:8821: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -g -O2 conftest.c conftstm.o >&5 configure:8824: $? = 0 configure:8862: result: ok configure:8899: checking for sysroot configure:8929: result: no configure:9006: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:9009: $? = 0 configure:9185: checking for mt configure:9215: result: no configure:9235: checking if : is a manifest tool configure:9241: : '-?' configure:9249: result: no configure:9887: checking for ANSI C header files configure:9907: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:9907: $? = 0 configure:9980: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -g -O2 conftest.c -lm >&5 configure:9980: $? = 0 configure:9980: ./conftest configure:9980: $? = 0 configure:9991: result: yes configure:10004: checking for sys/types.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for sys/stat.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for stdlib.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for string.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for memory.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for strings.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for inttypes.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for stdint.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10004: checking for unistd.h configure:10004: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10004: $? = 0 configure:10004: result: yes configure:10018: checking for dlfcn.h configure:10018: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:10018: $? = 0 configure:10018: result: yes configure:10207: checking for objdir configure:10222: result: .libs configure:10493: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc supports -fno-rtti -fno-exceptions configure:10511: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 configure:10515: $? = 0 configure:10528: result: yes configure:10855: checking for /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc option to produce PIC configure:10862: result: -fPIC -DPIC configure:10870: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc PIC flag -fPIC -DPIC works configure:10888: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 configure:10892: $? = 0 configure:10905: result: yes configure:10934: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc static flag -static works configure:10962: result: no configure:10977: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc supports -c -o file.o configure:10998: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:11002: $? = 0 configure:11024: result: yes configure:11032: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc supports -c -o file.o configure:11079: result: yes configure:11112: checking whether the /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:12265: result: yes configure:12505: checking dynamic linker characteristics configure:13016: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c -lm >&5 configure:13016: $? = 0 configure:13242: result: GNU/Linux ld.so configure:13349: checking how to hardcode library paths into programs configure:13374: result: immediate configure:13914: checking whether stripping libraries is possible configure:13919: result: yes configure:13954: checking if libtool supports shared libraries configure:13956: result: yes configure:13959: checking whether to build shared libraries configure:13980: result: no configure:13983: checking whether to build static libraries configure:13987: result: yes configure:14010: checking how to run the C++ preprocessor configure:14076: result: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E configure:14096: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp configure:14096: $? = 0 configure:14110: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E conftest.cpp conftest.cpp(23): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:14110: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:14279: checking for ld used by /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx configure:14346: result: /usr/bin/ld -m elf_x86_64 configure:14353: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:14368: result: yes configure:14423: checking whether the /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:15428: result: yes configure:15464: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -g -O2 conftest.cpp >&5 configure:15467: $? = 0 configure:15987: checking for /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx option to produce PIC configure:15994: result: -fPIC -DPIC configure:16002: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx PIC flag -fPIC -DPIC works configure:16020: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:16024: $? = 0 configure:16037: result: yes configure:16060: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx static flag -static works configure:16088: result: no configure:16100: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx supports -c -o file.o configure:16121: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -g -O2 -o out/conftest2.o conftest.cpp >&5 configure:16125: $? = 0 configure:16147: result: yes configure:16152: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx supports -c -o file.o configure:16199: result: yes configure:16229: checking whether the /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:16265: result: yes configure:16406: checking dynamic linker characteristics configure:17077: result: GNU/Linux ld.so configure:17130: checking how to hardcode library paths into programs configure:17155: result: immediate configure:17303: checking if libtool supports shared libraries configure:17305: result: yes configure:17308: checking whether to build shared libraries configure:17328: result: no configure:17331: checking whether to build static libraries configure:17335: result: yes configure:17656: checking for ifort option to produce PIC configure:17663: result: -fPIC configure:17671: checking if ifort PIC flag -fPIC works configure:17689: ifort -c -fPIC conftest.f >&5 configure:17693: $? = 0 configure:17706: result: yes configure:17729: checking if ifort static flag -static works configure:17757: result: no configure:17769: checking if ifort supports -c -o file.o configure:17790: ifort -c -o out/conftest2.o conftest.f >&5 configure:17794: $? = 0 configure:17816: result: yes configure:17821: checking if ifort supports -c -o file.o configure:17868: result: yes configure:17898: checking whether the ifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19001: result: yes configure:19142: checking dynamic linker characteristics configure:19807: result: GNU/Linux ld.so configure:19860: checking how to hardcode library paths into programs configure:19885: result: immediate configure:20029: checking if libtool supports shared libraries configure:20031: result: yes configure:20034: checking whether to build shared libraries configure:20054: result: no configure:20057: checking whether to build static libraries configure:20061: result: yes configure:20095: ifort -c conftest.f >&5 configure:20098: $? = 0 configure:20527: checking for ifort option to produce PIC configure:20534: result: -fPIC configure:20542: checking if ifort PIC flag -fPIC works configure:20560: ifort -c -fPIC conftest.f >&5 configure:20564: $? = 0 configure:20577: result: yes configure:20600: checking if ifort static flag -static works configure:20628: result: no configure:20640: checking if ifort supports -c -o file.o configure:20661: ifort -c -o out/conftest2.o conftest.f >&5 configure:20665: $? = 0 configure:20687: result: yes configure:20692: checking if ifort supports -c -o file.o configure:20739: result: yes configure:20769: checking whether the ifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:21872: result: yes configure:22013: checking dynamic linker characteristics configure:22678: result: GNU/Linux ld.so configure:22731: checking how to hardcode library paths into programs configure:22756: result: immediate configure:22820: checking for known C compilers configure:22841: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -g -O2 conftest.c >&5 configure:22841: $? = 0 configure:23213: result: Intel configure:23221: checking for known compiler/OS combinations configure:23295: result: Intel:x86_64 configure:23309: checking for known c++ compilers configure:23330: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -g -O2 conftest.cpp >&5 configure:23330: $? = 0 configure:23725: result: Intel configure:23733: checking for known compiler/OS combinations configure:23795: result: Intel:x86_64 configure:23982: checking whether make supports nested variables configure:23999: result: yes configure:24012: checking whether byte ordering is bigendian configure:24027: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(24): error: identifier "not" is undefined not a universal capable compiler ^ conftest.c(24): error: expected a ";" not a universal capable compiler ^ compilation aborted for conftest.c (code 2) configure:24027: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:24072: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 configure:24072: $? = 0 configure:24090: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(30): error: identifier "not" is undefined not big endian ^ conftest.c(30): error: expected a ";" not big endian ^ conftest.c(33): warning #12: parsing restarts here after previous syntax error ; ^ compilation aborted for conftest.c (code 2) configure:24090: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:24218: result: no configure:24238: checking if platform is IBM BlueGene configure:24255: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(25): error: identifier "choke" is undefined choke me ^ conftest.c(27): error: expected a ";" int ^ conftest.c(33): warning #12: parsing restarts here after previous syntax error compilation aborted for conftest.c (code 2) configure:24255: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #ifndef __bg__ | choke me | #endif | int | main () | { | | ; | return 0; | } configure:24260: result: no configure:24268: checking for gunzip configure:24284: found /usr/bin/gunzip configure:24295: result: gunzip -c configure:24305: checking for gzip configure:24332: result: gunzip -c configure:24342: checking for zcat configure:24369: result: gunzip -c configure:24392: checking if C++ compiler supports template class specialization configure:24416: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:24416: $? = 0 configure:24429: result: yes configure:24439: checking if C++ compiler supports template function specialization configure:24464: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:24464: $? = 0 configure:24477: result: yes configure:24495: checking if /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx works configure:24508: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:24508: $? = 0 configure:24522: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp(28): error: identifier "choke" is undefined choke me ^ compilation aborted for conftest.cpp (code 2) configure:24522: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | #ifdef __cplusplus | choke me | #endif | ; | return 0; | } configure:24526: result: yes configure:25374: checking for vsnprintf configure:25374: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c -lm >&5 configure:25374: $? = 0 configure:25374: result: yes configure:25386: checking if std::vector has templatized insert method configure:25421: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:25421: $? = 0 configure:25434: result: yes configure:25442: checking if std::copy must be old SGI format configure:25473: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:25473: $? = 0 configure:25486: result: no configure:25519: checking for inttypes.h configure:25519: result: yes configure:25527: checking for stdint.h configure:25527: result: yes configure:25535: checking for sys/types.h configure:25535: result: yes configure:25543: checking stddef.h usability configure:25543: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 configure:25543: $? = 0 configure:25543: result: yes configure:25543: checking stddef.h presence configure:25543: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c configure:25543: $? = 0 configure:25543: result: yes configure:25543: checking for stddef.h configure:25543: result: yes configure:25551: checking for stdlib.h configure:25551: result: yes configure:25564: checking size of void * configure:25569: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c -lm >&5 configure:25569: $? = 0 configure:25569: ./conftest configure:25569: $? = 0 configure:25583: result: 8 configure:25629: checking for size_t configure:25629: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 configure:25629: $? = 0 configure:25629: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(73): error: expected an expression if (sizeof ((size_t))) ^ compilation aborted for conftest.c (code 2) configure:25629: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:25629: result: yes configure:25675: checking for ptrdiff_t configure:25675: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 configure:25675: $? = 0 configure:25675: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(74): error: expected an expression if (sizeof ((ptrdiff_t))) ^ compilation aborted for conftest.c (code 2) configure:25675: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:25675: result: yes configure:25823: checking size of EntityHandle configure:25825: result: 8 configure:25840: checking if iMesh support is to be built configure:25842: result: no configure:25858: checking if iGeom support is to be built configure:25860: result: no configure:25924: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:787: creating libtool configure:28066: checking ieeefp.h usability configure:28066: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG conftest.c >&5 conftest.c(69): catastrophic error: cannot open source file "ieeefp.h" #include ^ compilation aborted for conftest.c (code 4) configure:28066: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:28066: result: no configure:28066: checking ieeefp.h presence configure:28066: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E conftest.c conftest.c(36): error #2379: cannot open source file "ieeefp.h" #include ^ configure:28066: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | /* end confdefs.h. */ | #include configure:28066: result: no configure:28066: checking for ieeefp.h configure:28066: result: no configure:28087: checking for C++ unordered_map configure:28118: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 In file included from /galileo/prod/compilers/gnu/4.9.2/none/bin/../include/c++/4.9.2/unordered_map(35), from conftest.cpp(36): /galileo/prod/compilers/gnu/4.9.2/none/bin/../include/c++/4.9.2/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ conftest.cpp(48): error: namespace "std" has no member "unordered_map" std::unordered_map map ^ conftest.cpp(48): error: type name is not allowed std::unordered_map map ^ conftest.cpp(48): error: type name is not allowed std::unordered_map map ^ conftest.cpp(48): error: identifier "map" is undefined std::unordered_map map ^ compilation aborted for conftest.cpp (code 2) configure:28118: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | std::unordered_map map | ; | return 0; | } configure:28142: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG conftest.cpp >&5 configure:28142: $? = 0 configure:28179: result: std::tr1 configure:28203: checking mpi.h usability configure:28203: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 configure:28203: $? = 0 configure:28203: result: yes configure:28203: checking mpi.h presence configure:28203: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c configure:28203: $? = 0 configure:28203: result: yes configure:28203: checking for mpi.h configure:28203: result: yes configure:28218: checking If mpi.h conflicts with C headers in C++ configure:28246: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.cpp configure:28246: $? = 0 configure:28247: result: no configure:28639: checking for mpiexec configure:28655: found /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpiexec configure:28666: result: mpiexec configure:28905: checking for deflate in -lz configure:28938: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c -lz -lm >&5 configure:28938: $? = 0 configure:28947: result: yes configure:28983: checking for SZ_Decompress in -lsz configure:29016: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c -lsz -lm >&5 ld: cannot find -lsz configure:29016: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Decompress (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return SZ_Decompress (); | ; | return 0; | } configure:29025: result: no configure:29061: checking if HDF5 support is enabled configure:29077: result: yes configure:29119: checking hdf5.h usability configure:29119: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 configure:29119: $? = 0 configure:29119: result: yes configure:29119: checking hdf5.h presence configure:29119: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c configure:29119: $? = 0 configure:29119: result: yes configure:29119: checking for hdf5.h configure:29119: result: yes configure:29139: checking for gpfs_stat in -lgpfs configure:29172: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lgpfs -lm >&5 configure:29172: $? = 0 configure:29181: result: yes configure:29197: checking for H5Fopen in -lhdf5 configure:29230: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lhdf5 -lm >&5 /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib/libhdf5.a(H5Zdeflate.o): In function `H5Z_filter_deflate': H5Zdeflate.c:(.text+0xcc): undefined reference to `inflateInit_' H5Zdeflate.c:(.text+0xe2): undefined reference to `inflate' H5Zdeflate.c:(.text+0x1d4): undefined reference to `compress2' H5Zdeflate.c:(.text+0x2fc): undefined reference to `inflateEnd' H5Zdeflate.c:(.text+0x33c): undefined reference to `inflateEnd' H5Zdeflate.c:(.text+0x391): undefined reference to `inflateEnd' configure:29230: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29240: result: no configure:29253: checking for H5Fopen in -lhdf5 configure:29286: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lhdf5 -ldl -lm >&5 /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib/libhdf5.a(H5Zdeflate.o): In function `H5Z_filter_deflate': H5Zdeflate.c:(.text+0xcc): undefined reference to `inflateInit_' H5Zdeflate.c:(.text+0xe2): undefined reference to `inflate' H5Zdeflate.c:(.text+0x1d4): undefined reference to `compress2' H5Zdeflate.c:(.text+0x2fc): undefined reference to `inflateEnd' H5Zdeflate.c:(.text+0x33c): undefined reference to `inflateEnd' H5Zdeflate.c:(.text+0x391): undefined reference to `inflateEnd' configure:29286: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29296: result: no configure:29310: checking for H5Fopen in -lhdf5 configure:29343: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lhdf5 -lz -ldl -lm >&5 configure:29343: $? = 0 configure:29353: result: yes configure:29698: checking for H5Pset_fapl_mpio in -lhdf5 configure:29732: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lhdf5 -lhdf5 -lgpfs -lz -ldl -lm >&5 configure:29732: $? = 0 configure:29741: result: yes configure:29764: checking for H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS configure:29790: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include conftest.c configure:29790: $? = 0 configure:29791: result: yes configure:29809: checking if CCMIO support is enabled configure:29823: result: yes configure:29831: checking if CCMIO support available configure:29833: result: configure:29865: checking ccmio.h usability configure:29865: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "ccmio.h" #include ^ compilation aborted for conftest.c (code 4) configure:29865: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29865: result: no configure:29865: checking ccmio.h presence configure:29865: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "ccmio.h" #include ^ configure:29865: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:29865: result: no configure:29865: checking for ccmio.h configure:29865: result: no configure:29879: checking ccmioutility.h usability configure:29879: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "ccmioutility.h" #include ^ compilation aborted for conftest.c (code 4) configure:29879: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29879: result: no configure:29879: checking ccmioutility.h presence configure:29879: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "ccmioutility.h" #include ^ configure:29879: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:29879: result: no configure:29879: checking for ccmioutility.h configure:29879: result: no configure:29893: checking ccmiocore.h usability configure:29893: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "ccmiocore.h" #include ^ compilation aborted for conftest.c (code 4) configure:29893: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29893: result: no configure:29893: checking ccmiocore.h presence configure:29893: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "ccmiocore.h" #include ^ configure:29893: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:29893: result: no configure:29893: checking for ccmiocore.h configure:29893: result: no configure:29912: checking unsuccessful, Ccmio support disabled configure:29914: result: configure:29950: checking if DAMSEL support is enabled configure:29967: result: no configure:29972: checking if DAMSEL support available configure:29974: result: configure:30072: checking if NetCDF support is enabled configure:30086: result: yes configure:30118: checking for nc-config configure:30149: result: no configure:30166: WARNING: "NetCDF configuration utility not found" configure:30184: checking netcdf.h usability configure:30184: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "netcdf.h" #include ^ compilation aborted for conftest.c (code 4) configure:30184: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:30184: result: no configure:30184: checking netcdf.h presence configure:30184: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "netcdf.h" #include ^ configure:30184: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:30184: result: no configure:30184: checking for netcdf.h configure:30184: result: no configure:30258: WARNING: NetCDF header not found. configure:30267: checking for nc_create in -lnetcdf configure:30300: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lnetcdf -lm >&5 ld: cannot find -lnetcdf configure:30300: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30309: result: no configure:30836: checking for nc_create in -lnetcdf configure:30869: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lgpfs -lz -ldl -lm >&5 ld: cannot find -lnetcdf configure:30869: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30878: result: no configure:30887: checking for nc_create in -lnetcdf configure:30920: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lgpfs -lz -ldl -lcurl -lm >&5 ld: cannot find -lnetcdf configure:30920: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30929: result: no configure:30955: WARNING: "NetCDF support disabled" configure:31005: checking if Pnetcdf support is enabled configure:31008: result: yes configure:31052: checking pnetcdf.h usability configure:31052: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "pnetcdf.h" #include ^ compilation aborted for conftest.c (code 4) configure:31052: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31052: result: no configure:31052: checking pnetcdf.h presence configure:31052: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "pnetcdf.h" #include ^ configure:31052: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:31052: result: no configure:31052: checking for pnetcdf.h configure:31052: result: no configure:31132: checking for ncmpi_create in -lpnetcdf configure:31165: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lpnetcdf -lm >&5 ld: cannot find -lpnetcdf configure:31165: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char ncmpi_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return ncmpi_create (); | ; | return 0; | } configure:31174: result: no configure:31226: checking if CGNS support is enabled configure:31240: result: yes configure:31283: checking cgnslib.h usability configure:31283: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -c -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c >&5 conftest.c(70): catastrophic error: cannot open source file "cgnslib.h" #include ^ compilation aborted for conftest.c (code 4) configure:31283: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31283: result: no configure:31283: checking cgnslib.h presence configure:31283: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set conftest.c conftest.c(37): error #2379: cannot open source file "cgnslib.h" #include ^ configure:31283: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | #include configure:31283: result: no configure:31283: checking for cgnslib.h configure:31283: result: no configure:31287: WARNING: CGNS header not found. configure:31294: checking for cg_open in -lcgns configure:31327: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lcgns -lm >&5 ld: cannot find -lcgns configure:31327: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31336: result: no configure:31863: checking for cg_open in -lcgns configure:31896: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lgpfs -lz -ldl -lm >&5 ld: cannot find -lcgns configure:31896: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31905: result: no configure:31914: checking for cg_open in -lcgns configure:31947: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -o conftest -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib conftest.c -lcgns -lhdf5_hl -lhdf5 -lgpfs -lz -ldl -lcurl -lm >&5 ld: cannot find -lcgns configure:31947: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.6.3" | #define PACKAGE_STRING "MOAB 4.6.3" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.6.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.6.3" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 6 | #define MB_VERSION_PATCH 3 | #define MB_VERSION_STRING "MOAB 4.6.3" | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31956: result: no configure:31982: WARNING: "CGNS support disabled" configure:32079: checking for doxygen configure:32097: found /usr/bin/doxygen configure:32109: result: /usr/bin/doxygen configure:32320: checking if mbconvert is to be built configure:32322: result: yes configure:32347: checking if hexmodops is to be built configure:32349: result: yes configure:32374: checking if qvdual is to be built configure:32376: result: no configure:32401: checking if vtkMOABReader is to be built configure:32403: result: no configure:32428: checking if vtkMOABReaderNew is to be built configure:32430: result: no configure:32455: checking if mbsize is to be built configure:32457: result: yes configure:32482: checking if mbskin is to be built configure:32484: result: yes configure:32509: checking if mbtagprop is to be built configure:32511: result: yes configure:32536: checking if mbmem is to be built configure:32538: result: yes configure:32563: checking if mcnpmit is to be built configure:32565: result: no configure:32590: checking if mbcoupler is to be built configure:32592: result: no configure:32617: checking if spheredecomp is to be built configure:32619: result: yes configure:32644: checking if mbsurfplot is to be built configure:32646: result: yes configure:32671: checking if mbzoltan is to be built configure:32673: result: no configure:32698: checking if dagmc is to be built configure:32700: result: yes configure:32725: checking if gsets is to be built configure:32727: result: yes configure:32752: checking if mbdepth is to be built configure:32754: result: yes configure:32779: checking if refiner is to be built configure:32781: result: no configure:32806: checking if h5mtools is to be built configure:32808: result: yes configure:32833: checking if mbcslam is to be built configure:32835: result: no configure:36510: checking that generated files are newer than configure configure:36516: result: done configure:36692: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by MOAB config.status 4.6.3, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on node165 config.status:1459: creating Makefile config.status:1459: creating moab.make config.status:1459: creating MOABConfig.cmake config.status:1459: creating src/Makefile config.status:1459: creating src/io/Makefile config.status:1459: creating src/io/mhdf/Makefile config.status:1459: creating src/LocalDiscretization/Makefile config.status:1459: creating src/parallel/Makefile config.status:1459: creating src/oldinc/Makefile config.status:1459: creating test/Makefile config.status:1459: creating test/dagmc/Makefile config.status:1459: creating test/h5file/Makefile config.status:1459: creating test/dual/Makefile config.status:1459: creating test/obb/Makefile config.status:1459: creating test/perf/Makefile config.status:1459: creating test/perf/point_location/Makefile config.status:1459: creating test/io/Makefile config.status:1459: creating test/parallel/Makefile config.status:1459: creating test/oldinc/Makefile config.status:1459: creating itaps/iBase_f.h config.status:1459: creating itaps/Makefile config.status:1459: creating itaps/imesh/Makefile config.status:1459: creating itaps/imesh/iMesh-Defs.inc config.status:1459: creating itaps/igeom/Makefile config.status:1459: creating itaps/igeom/FBiGeom-Defs.inc config.status:1459: creating tools/Makefile config.status:1459: creating tools/refiner/Makefile config.status:1459: creating tools/mbcoupler/Makefile config.status:1459: creating tools/mbcslam/Makefile config.status:1459: creating tools/mbzoltan/Config.moab config.status:1459: creating tools/mbzoltan/Makefile config.status:1459: creating tools/mcnpmit/Makefile config.status:1459: creating tools/qvdual/Makefile config.status:1459: creating tools/dagmc/Makefile config.status:1459: creating tools/vtkMOABReader/CMakeLists.txt config.status:1459: creating tools/vtkMOABReaderNew/CMakeLists.txt config.status:1459: creating doc/Makefile config.status:1459: creating doc/user.dox config.status:1459: creating doc/config.tex config.status:1459: creating MeshFiles/Makefile config.status:1459: creating MeshFiles/unittest/Makefile config.status:1459: creating MeshFiles/unittest/io/Makefile config.status:1459: creating MeshFiles/unittest/iGeom/Makefile config.status:1459: creating MeshFiles/unittest/dagmc/Makefile config.status:1459: creating config.h config.status:1640: config.h is unchanged config.status:1459: creating src/moab/Version.h config.status:1640: src/moab/Version.h is unchanged config.status:1459: creating src/moab/EntityHandle.hpp config.status:1640: src/moab/EntityHandle.hpp is unchanged config.status:1459: creating src/parallel/moab_mpi_config.h config.status:1640: src/parallel/moab_mpi_config.h is unchanged config.status:1459: creating src/FCDefs.h config.status:1640: src/FCDefs.h is unchanged config.status:1688: executing depfiles commands config.status:1688: executing libtool commands config.status:1688: executing src/MOAB_FCDefs.h commands configure:39710: result: C: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set configure:39712: result: C++: /cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set configure:39715: result: Fortran90: ifort -O2 configure:39719: result: Fortran77: ifort -O2 configure:39741: WARNING: ************************************************************************* * MOAB has been configured w/out the NetCDF library. * Support for ExodusII/Genesis and other file formats is disabled! ************************************************************************* ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx ac_cv_env_F77_set=set ac_cv_env_F77_value=ifort ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=ifort ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPIEXEC_NP_set= ac_cv_env_MPIEXEC_NP_value= ac_cv_env_MPIEXEC_set= ac_cv_env_MPIEXEC_value= ac_cv_env_NP_set= ac_cv_env_NP_value= ac_cv_env_QTDIR_set=set ac_cv_env_QTDIR_value=/usr/lib64/qt-3.3 ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_vsnprintf=yes ac_cv_header_ccmio_h=no ac_cv_header_ccmiocore_h=no ac_cv_header_ccmioutility_h=no ac_cv_header_cgnslib_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_mpi_h=yes ac_cv_header_netcdf_h=no ac_cv_header_pnetcdf_h=no ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_cgns_cg_open=no ac_cv_lib_gpfs_gpfs_stat=yes ac_cv_lib_hdf5_H5Pset_fapl_mpio=yes ac_cv_lib_hdf5___H5Fopen=yes ac_cv_lib_netcdf_nc_create=no ac_cv_lib_pnetcdf_ncmpi_create=no ac_cv_lib_sz_SZ_Decompress=no ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_DOXYGEN=/usr/bin/doxygen ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_NC_CONFIG=no ac_cv_path_SED=sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E' ac_cv_prog_CXXCPP='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E' ac_cv_prog_MPIEXEC=mpiexec ac_cv_prog_SED=sed ac_cv_prog_ZCAT='gunzip -c' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_make_make_set=yes ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes fathom_cv_std_count_old_sgi=no fathom_cv_std_vector_templatized_insert=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_F77=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=19200000 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop mk_cv_cxx_unordered_map=std::tr1 snl_cv_template_func_specialization=yes snl_cv_template_specialization=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/missing aclocal-1.13' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CFLAGS='' AM_CPPFLAGS=' -I/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -isystem /galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL' AM_CXXFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_FCFLAGS='' AM_FFLAGS='' AM_LDFLAGS=' -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/missing autoconf' AUTOHEADER='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/missing autoheader' AUTOMAKE='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/missing automake-1.13' AWK='gawk' CC='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc' CCDEPMODE='depmode=gcc3' CCMIO_FILE_FALSE='' CCMIO_FILE_TRUE='#' CCMIO_LIBS='' CFLAGS=' -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -O2 -DNDEBUG' CGM_CPPFLAGS='' CGM_DIR='' CGM_LDFLAGS='' CGM_LIBS='' CGM_LTFLAGS='' CGNS_FILE_FALSE='' CGNS_FILE_TRUE='#' CGNS_LIBS='' CPP='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc -E' CPPFLAGS=' -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set' CXX='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx' CXXCPP='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicxx -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -Wall -wd981 -wd279 -wd1418 -wd383 -wd1572 -wd2259 -O2 -DNDEBUG' CYGPATH_W='echo' DAMSEL_FILE_FALSE='' DAMSEL_FILE_TRUE='#' DAMSEL_LIBS='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DISTCHECK_CONFIGURE_FLAGS=' --with-mpi="/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/" --with-hdf5="/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5" --enable-mbzoltan="no"' DLLTOOL='false' DOXYGEN='/usr/bin/doxygen' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLE_DOCS_FALSE='' ENABLE_DOCS_TRUE='#' ENABLE_FORTRAN_FALSE='' ENABLE_FORTRAN_TRUE='#' ENABLE_dagmc_FALSE='#' ENABLE_dagmc_TRUE='' ENABLE_gsets_FALSE='#' ENABLE_gsets_TRUE='' ENABLE_h5mtools_FALSE='#' ENABLE_h5mtools_TRUE='' ENABLE_hexmodops_FALSE='#' ENABLE_hexmodops_TRUE='' ENABLE_igeom_FALSE='' ENABLE_igeom_TRUE='#' ENABLE_imesh_FALSE='' ENABLE_imesh_TRUE='#' ENABLE_mbconvert_FALSE='#' ENABLE_mbconvert_TRUE='' ENABLE_mbcoupler_FALSE='' ENABLE_mbcoupler_TRUE='#' ENABLE_mbcslam_FALSE='' ENABLE_mbcslam_TRUE='#' ENABLE_mbdepth_FALSE='#' ENABLE_mbdepth_TRUE='' ENABLE_mbmem_FALSE='#' ENABLE_mbmem_TRUE='' ENABLE_mbsize_FALSE='#' ENABLE_mbsize_TRUE='' ENABLE_mbskin_FALSE='#' ENABLE_mbskin_TRUE='' ENABLE_mbsurfplot_FALSE='#' ENABLE_mbsurfplot_TRUE='' ENABLE_mbtagprop_FALSE='#' ENABLE_mbtagprop_TRUE='' ENABLE_mbzoltan_FALSE='' ENABLE_mbzoltan_TRUE='#' ENABLE_mcnpmit_FALSE='' ENABLE_mcnpmit_TRUE='#' ENABLE_qvdual_FALSE='' ENABLE_qvdual_TRUE='#' ENABLE_refiner_FALSE='' ENABLE_refiner_TRUE='#' ENABLE_spheredecomp_FALSE='#' ENABLE_spheredecomp_TRUE='' ENABLE_vtkMOABReaderNew_FALSE='' ENABLE_vtkMOABReaderNew_TRUE='#' ENABLE_vtkMOABReader_FALSE='' ENABLE_vtkMOABReader_TRUE='#' EXEEXT='' EXPORT_LDFLAGS=' -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib' EXPORT_LTFLAGS='' F77='ifort' FC='ifort' FCFLAGS=' -O2' FCLIBS='' FFLAGS=' -O2' FGREP='/usr/bin/grep -F' GREP='/usr/bin/grep' HAVE_CGM_FALSE='' HAVE_CGM_TRUE='#' HAVE_ZCAT_FALSE='' HAVE_ZCAT_TRUE='#' HDF5_FILE_FALSE='#' HDF5_FILE_TRUE='' HDF5_LIBS='-lhdf5 -lgpfs -lz -ldl' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS=' -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib -L/galileo/home/userexternal/lbotti00/hdf5-1.8.10/hdf5/lib' LIBOBJS='' LIBS=' -lm' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' MOAB_CGM_DEFINES='' MOAB_CXX_LIBS=' -L/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/lib/debug_mt -L/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/lib -L/galileo/prod/compilers/intel/cs-xe-2015/binary/composer_xe_2015.2.164/compiler/lib/intel64 -L/galileo/prod/compilers/gnu/4.9.2/none/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.9.2/ -L/galileo/prod/compilers/gnu/4.9.2/none/bin/../lib/gcc/ -L/galileo/prod/compilers/gnu/4.9.2/none/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.9.2/../../../../lib64 -L/galileo/prod/compilers/gnu/4.9.2/none/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.9.2/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/galileo/prod/compilers/gnu/4.9.2/none/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.9.2/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpicxx -lmpifort -lmpi -lmpigi -ldl -lrt -lpthread -limf -lsvml -lirng -lipgo -ldecimal -lcilkrts -lstdc++ -lgcc -lintlc -lsvml -lgcc -lirc_s -ldl' MOAB_CXX_LINKFLAGS='-L/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/lib/debug_mt -L/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/lib' MOC='' MPE_LIBS='' MPIEXEC='mpiexec' MPIEXEC_NP='-np' NC_CONFIG='no' NETCDF_CPPFLAGS='' NETCDF_FILE_FALSE='' NETCDF_FILE_TRUE='#' NETCDF_LDFLAGS='' NETCDF_LIBS='' NETCDF_VERSION='' NM='/usr/bin/nm -B' NMEDIT='' NP='2' OBJDUMP='objdump' OBJEXT='o' OLD_HEADERS_FALSE='#' OLD_HEADERS_TRUE='' OTOOL64='' OTOOL='' PACKAGE='moab' PACKAGE_BUGREPORT='' PACKAGE_NAME='MOAB' PACKAGE_STRING='MOAB 4.6.3' PACKAGE_TARNAME='moab' PACKAGE_URL='' PACKAGE_VERSION='4.6.3' PARALLEL_FALSE='#' PARALLEL_HDF5_FALSE='#' PARALLEL_HDF5_TRUE='' PARALLEL_TRUE='' PATH_SEPARATOR=':' PNETCDF_FILE_FALSE='' PNETCDF_FILE_TRUE='#' PNETCDF_LIBS='' QTDIR='/usr/lib64/qt-3.3' QVDUAL_INCLUDES='' QVDUAL_LIBS='' RANLIB='ranlib' SED='sed' SET_MAKE='' SHELL='/bin/sh' SIZEOF_VOID_P='8' STRIP='strip' UIC='' USE_MPIEXEC_FALSE='#' USE_MPIEXEC_TRUE='' USE_MPI_FALSE='#' USE_MPI_TRUE='' VERSION='4.6.3' VTK_INCLUDES='' VTK_INC_DIR='' VTK_LIBS='' VTK_LIB_DIR='' WITH_MPE='no' XMKMF='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ZCAT='gunzip -c' ZOLTAN_INC_FLAGS='' ZOLTAN_LIBS='' ZOLTAN_LIB_FLAGS='' ac_ct_AR='ar' ac_ct_CC='/cineca/prod/compilers/intel/cs-xe-2015/binary/impi_5.0.2/intel64/bin/mpicc' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /galileo/home/userexternal/lbotti00/moab-4.6.3/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/galileo/home/userexternal/lbotti00/moab' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "MOAB" #define PACKAGE_TARNAME "moab" #define PACKAGE_VERSION "4.6.3" #define PACKAGE_STRING "MOAB 4.6.3" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define PACKAGE "moab" #define VERSION "4.6.3" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define MOAB_HAVE_INTTYPES_H /**/ #define MOAB_HAVE_STDINT_H /**/ #define MOAB_HAVE_SYS_TYPES_H /**/ #define MOAB_HAVE_STDDEF_H /**/ #define MOAB_HAVE_STDLIB_H /**/ #define SIZEOF_VOID_P 8 #define MOAB_HAVE_SIZE_T /**/ #define MOAB_HAVE_PTRDIFF_T /**/ #define MB_VERSION "4.6.3" #define MB_VERSION_MAJOR 4 #define MB_VERSION_MINOR 6 #define MB_VERSION_PATCH 3 #define MB_VERSION_STRING "MOAB 4.6.3" #define HAVE_HDF5_H 1 configure: exit 0