This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by MOAB configure 4.7.0pre, which was generated by GNU Autoconf 2.68. Invocation command line was $ ./configure ## --------- ## ## Platform. ## ## --------- ## hostname = dyna6-93.cs.uoregon.edu uname -m = x86_64 uname -r = 13.3.0 uname -s = Darwin uname -v = Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 Kernel configured for up to 8 processors. 4 processors are physically available. 8 processors are logically available. Processor type: i486 (Intel 80486) Processors active: 0 1 2 3 4 5 6 7 Primary memory available: 16.00 gigabytes Default processor set: 183 tasks, 971 threads, 8 processors Load average: 1.10, Mach factor: 6.88 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /opt/local/bin PATH: /opt/local/sbin PATH: /usr/bin PATH: /bin PATH: /usr/sbin PATH: /sbin PATH: /usr/local/bin PATH: /usr/texbin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3235: checking build system type configure:3249: result: x86_64-apple-darwin13.3.0 configure:3269: checking host system type configure:3282: result: x86_64-apple-darwin13.3.0 configure:3302: checking target system type configure:3315: result: x86_64-apple-darwin13.3.0 configure:3358: checking for a BSD-compatible install configure:3426: result: /usr/bin/install -c configure:3437: checking whether build environment is sane configure:3487: result: yes configure:3628: checking for a thread-safe mkdir -p configure:3667: result: config/install-sh -c -d configure:3680: checking for gawk configure:3710: result: no configure:3680: checking for mawk configure:3710: result: no configure:3680: checking for nawk configure:3710: result: no configure:3680: checking for awk configure:3696: found /usr/bin/awk configure:3707: result: awk configure:3718: checking whether make sets $(MAKE) configure:3740: result: yes configure:3823: checking for sed configure:3839: found /usr/bin/sed configure:3851: result: sed configure:3887: checking for style of include used by make configure:3915: result: GNU configure:4550: checking for gcc configure:4566: found /usr/bin/gcc configure:4577: result: gcc configure:4806: checking for C compiler version configure:4815: gcc --version >&5 Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn) Target: x86_64-apple-darwin13.3.0 Thread model: posix Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 configure:4826: $? = 0 configure:4815: gcc -v >&5 Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn) Target: x86_64-apple-darwin13.3.0 Thread model: posix configure:4826: $? = 0 configure:4815: gcc -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:4826: $? = 1 configure:4815: gcc -qversion >&5 clang: error: unknown argument: '-qversion' [-Wunused-command-line-argument-hard-error-in-future] clang: note: this will be a hard error (cannot be downgraded to a warning) in the future clang: error: no input files configure:4826: $? = 1 configure:4846: checking whether the C compiler works configure:4868: gcc conftest.c >&5 configure:4872: $? = 0 configure:4920: result: yes configure:4923: checking for C compiler default output file name configure:4925: result: a.out configure:4931: checking for suffix of executables configure:4938: gcc -o conftest conftest.c >&5 configure:4942: $? = 0 configure:4964: result: configure:4986: checking whether we are cross compiling configure:4994: gcc -o conftest conftest.c >&5 configure:4998: $? = 0 configure:5005: ./conftest configure:5009: $? = 0 configure:5024: result: no configure:5029: checking for suffix of object files configure:5051: gcc -c conftest.c >&5 configure:5055: $? = 0 configure:5076: result: o configure:5080: checking whether we are using the GNU C compiler configure:5099: gcc -c conftest.c >&5 configure:5099: $? = 0 configure:5108: result: yes configure:5117: checking whether gcc accepts -g configure:5137: gcc -c -g conftest.c >&5 configure:5137: $? = 0 configure:5178: result: yes configure:5195: checking for gcc option to accept ISO C89 configure:5259: gcc -c -g -O2 conftest.c >&5 configure:5259: $? = 0 configure:5272: result: none needed configure:5294: checking dependency style of gcc configure:5405: result: gcc3 configure:5426: checking how to run the C preprocessor configure:5457: gcc -E conftest.c configure:5457: $? = 0 configure:5471: gcc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5471: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | /* end confdefs.h. */ | #include configure:5496: result: gcc -E configure:5516: gcc -E conftest.c configure:5516: $? = 0 configure:5530: gcc -E conftest.c conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5530: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | /* end confdefs.h. */ | #include configure:5617: checking for g++ configure:5633: found /usr/bin/g++ configure:5644: result: g++ configure:5671: checking for C++ compiler version configure:5680: g++ --version >&5 Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn) Target: x86_64-apple-darwin13.3.0 Thread model: posix Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 configure:5691: $? = 0 configure:5680: g++ -v >&5 Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1 Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn) Target: x86_64-apple-darwin13.3.0 Thread model: posix configure:5691: $? = 0 configure:5680: g++ -V >&5 clang: error: argument to '-V' is missing (expected 1 value) clang: error: no input files configure:5691: $? = 1 configure:5680: g++ -qversion >&5 clang: error: unknown argument: '-qversion' [-Wunused-command-line-argument-hard-error-in-future] clang: note: this will be a hard error (cannot be downgraded to a warning) in the future clang: error: no input files configure:5691: $? = 1 configure:5695: checking whether we are using the GNU C++ compiler configure:5714: g++ -c conftest.cpp >&5 configure:5714: $? = 0 configure:5723: result: yes configure:5732: checking whether g++ accepts -g configure:5752: g++ -c -g conftest.cpp >&5 configure:5752: $? = 0 configure:5793: result: yes configure:5818: checking dependency style of g++ configure:5929: result: gcc3 configure:5949: checking how to run the C++ preprocessor configure:5976: g++ -E conftest.cpp configure:5976: $? = 0 configure:5990: g++ -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:5990: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | /* end confdefs.h. */ | #include configure:6015: result: g++ -E configure:6035: g++ -E conftest.cpp configure:6035: $? = 0 configure:6049: g++ -E conftest.cpp conftest.cpp:11:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:6049: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | /* end confdefs.h. */ | #include configure:6132: checking for gfortran configure:6162: result: no configure:6132: checking for g95 configure:6162: result: no configure:6132: checking for xlf95 configure:6162: result: no configure:6132: checking for f95 configure:6162: result: no configure:6132: checking for fort configure:6162: result: no configure:6132: checking for ifort configure:6162: result: no configure:6132: checking for ifc configure:6162: result: no configure:6132: checking for efc configure:6162: result: no configure:6132: checking for pgfortran configure:6162: result: no configure:6132: checking for pgf95 configure:6162: result: no configure:6132: checking for lf95 configure:6162: result: no configure:6132: checking for ftn configure:6162: result: no configure:6132: checking for xlf90 configure:6162: result: no configure:6132: checking for f90 configure:6162: result: no configure:6132: checking for pgf90 configure:6162: result: no configure:6132: checking for pghpf configure:6162: result: no configure:6132: checking for epcf90 configure:6162: result: no configure:6132: checking for g77 configure:6162: result: no configure:6132: checking for xlf configure:6162: result: no configure:6132: checking for f77 configure:6162: result: no configure:6132: checking for frt configure:6162: result: no configure:6132: checking for pgf77 configure:6162: result: no configure:6132: checking for cf77 configure:6162: result: no configure:6132: checking for fort77 configure:6162: result: no configure:6132: checking for fl32 configure:6162: result: no configure:6132: checking for af77 configure:6162: result: no configure:6185: checking for Fortran compiler version configure:6194: --version >&5 ./configure: line 6196: --version: command not found configure:6205: $? = 127 configure:6194: -v >&5 ./configure: line 6196: -v: command not found configure:6205: $? = 127 configure:6194: -V >&5 ./configure: line 6196: -V: command not found configure:6205: $? = 127 configure:6194: -qversion >&5 ./configure: line 6196: -qversion: command not found configure:6205: $? = 127 configure:6214: checking whether we are using the GNU Fortran compiler configure:6227: -c conftest.F >&5 ./configure: line 1961: -c: command not found configure:6227: $? = 127 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6236: result: no configure:6242: checking whether accepts -g configure:6253: -c -g conftest.f >&5 ./configure: line 1961: -c: command not found configure:6253: $? = 127 configure: failed program was: | program main | | end configure:6261: result: no configure:6338: checking for g77 configure:6368: result: no configure:6338: checking for xlf configure:6368: result: no configure:6338: checking for f77 configure:6368: result: no configure:6338: checking for frt configure:6368: result: no configure:6338: checking for pgf77 configure:6368: result: no configure:6338: checking for cf77 configure:6368: result: no configure:6338: checking for fort77 configure:6368: result: no configure:6338: checking for fl32 configure:6368: result: no configure:6338: checking for af77 configure:6368: result: no configure:6338: checking for xlf90 configure:6368: result: no configure:6338: checking for f90 configure:6368: result: no configure:6338: checking for pgf90 configure:6368: result: no configure:6338: checking for pghpf configure:6368: result: no configure:6338: checking for epcf90 configure:6368: result: no configure:6338: checking for gfortran configure:6368: result: no configure:6338: checking for g95 configure:6368: result: no configure:6338: checking for xlf95 configure:6368: result: no configure:6338: checking for f95 configure:6368: result: no configure:6338: checking for fort configure:6368: result: no configure:6338: checking for ifort configure:6368: result: no configure:6338: checking for ifc configure:6368: result: no configure:6338: checking for efc configure:6368: result: no configure:6338: checking for pgfortran configure:6368: result: no configure:6338: checking for pgf95 configure:6368: result: no configure:6338: checking for lf95 configure:6368: result: no configure:6338: checking for ftn configure:6368: result: no configure:6391: checking for Fortran 77 compiler version configure:6400: --version >&5 ./configure: line 6402: --version: command not found configure:6411: $? = 127 configure:6400: -v >&5 ./configure: line 6402: -v: command not found configure:6411: $? = 127 configure:6400: -V >&5 ./configure: line 6402: -V: command not found configure:6411: $? = 127 configure:6400: -qversion >&5 ./configure: line 6402: -qversion: command not found configure:6411: $? = 127 configure:6420: checking whether we are using the GNU Fortran 77 compiler configure:6433: -c conftest.F >&5 ./configure: line 1999: -c: command not found configure:6433: $? = 127 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6442: result: no configure:6448: checking whether accepts -g configure:6459: -c -g conftest.f >&5 ./configure: line 1999: -c: command not found configure:6459: $? = 127 configure: failed program was: | program main | | end configure:6467: result: no configure:6517: checking whether ln -s works configure:6521: result: yes configure:6528: checking whether make sets $(MAKE) configure:6550: result: yes configure:6636: checking how to print strings configure:6663: result: printf configure:6684: checking for a sed that does not truncate output configure:6748: result: sed configure:6766: checking for grep that handles long lines and -e configure:6824: result: /usr/bin/grep configure:6829: checking for egrep configure:6891: result: /usr/bin/grep -E configure:6896: checking for fgrep configure:6958: result: /usr/bin/grep -F configure:6993: checking for ld used by gcc configure:7060: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:7067: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:7082: result: no configure:7094: checking for BSD- or MS-compatible name lister (nm) configure:7143: result: /opt/local/bin/nm configure:7273: checking the name lister (/opt/local/bin/nm) interface configure:7280: gcc -c -g -O2 conftest.c >&5 configure:7283: /opt/local/bin/nm "conftest.o" configure:7286: output 000000000000022c S _some_variable configure:7293: result: BSD nm configure:7297: checking the maximum length of command line arguments configure:7427: result: 196608 configure:7444: checking whether the shell understands some XSI constructs configure:7454: result: yes configure:7458: checking whether the shell understands "+=" configure:7464: result: yes configure:7499: checking how to convert x86_64-apple-darwin13.3.0 file names to x86_64-apple-darwin13.3.0 format configure:7539: result: func_convert_file_noop configure:7546: checking how to convert x86_64-apple-darwin13.3.0 file names to toolchain format configure:7566: result: func_convert_file_noop configure:7573: checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files configure:7580: result: -r configure:7654: checking for objdump configure:7684: result: no configure:7713: checking how to recognize dependent libraries configure:7915: result: pass_all configure:8000: checking for dlltool configure:8030: result: no configure:8060: checking how to associate runtime and link libraries configure:8087: result: printf %s\n configure:8148: checking for ar configure:8164: found /opt/local/bin/ar configure:8175: result: ar configure:8212: checking for archiver @FILE support configure:8229: gcc -c -g -O2 conftest.c >&5 configure:8229: $? = 0 configure:8232: ar cru libconftest.a @conftest.lst >&5 ar: @conftest.lst: No such file or directory configure:8235: $? = 1 configure:8255: result: no configure:8313: checking for strip configure:8329: found /opt/local/bin/strip configure:8340: result: strip configure:8412: checking for ranlib configure:8428: found /opt/local/bin/ranlib configure:8439: result: ranlib configure:8541: checking command to parse /opt/local/bin/nm output from gcc object configure:8661: gcc -c -g -O2 conftest.c >&5 configure:8664: $? = 0 configure:8668: /opt/local/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8671: $? = 0 cannot find nm_test_var in conftest.nm configure:8661: gcc -c -g -O2 conftest.c >&5 configure:8664: $? = 0 configure:8668: /opt/local/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8671: $? = 0 configure:8737: gcc -o conftest -g -O2 conftest.c conftstm.o >&5 configure:8740: $? = 0 configure:8778: result: ok configure:8815: checking for sysroot configure:8845: result: no configure:9101: checking for mt configure:9131: result: no configure:9151: checking if : is a manifest tool configure:9157: : '-?' configure:9165: result: no configure:9221: checking for dsymutil configure:9237: found /usr/bin/dsymutil configure:9248: result: dsymutil configure:9313: checking for nmedit configure:9329: found /opt/local/bin/nmedit configure:9340: result: nmedit configure:9405: checking for lipo configure:9421: found /opt/local/bin/lipo configure:9432: result: lipo configure:9497: checking for otool configure:9513: found /opt/local/bin/otool configure:9524: result: otool configure:9589: checking for otool64 configure:9619: result: no configure:9664: checking for -single_module linker flag gcc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c configure:9697: result: yes configure:9700: checking for -exported_symbols_list linker flag configure:9720: gcc -o conftest -g -O2 -Wl,-exported_symbols_list,conftest.sym conftest.c -lm >&5 configure:9720: $? = 0 configure:9730: result: yes configure:9733: checking for -force_load linker flag gcc -g -O2 -c -o conftest.o conftest.c ar cru libconftest.a conftest.o ranlib libconftest.a gcc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a configure:9765: result: yes configure:9803: checking for ANSI C header files configure:9823: gcc -c -g -O2 conftest.c >&5 configure:9823: $? = 0 configure:9896: gcc -o conftest -g -O2 conftest.c -lm >&5 configure:9896: $? = 0 configure:9896: ./conftest configure:9896: $? = 0 configure:9907: result: yes configure:9920: checking for sys/types.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for sys/stat.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for stdlib.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for string.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for memory.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for strings.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for inttypes.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for stdint.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9920: checking for unistd.h configure:9920: gcc -c -g -O2 conftest.c >&5 configure:9920: $? = 0 configure:9920: result: yes configure:9934: checking for dlfcn.h configure:9934: gcc -c -g -O2 conftest.c >&5 configure:9934: $? = 0 configure:9934: result: yes configure:10123: checking for objdir configure:10138: result: .libs configure:10409: checking if gcc supports -fno-rtti -fno-exceptions configure:10427: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 configure:10431: $? = 0 configure:10444: result: yes configure:10771: checking for gcc option to produce PIC configure:10778: result: -fno-common -DPIC configure:10786: checking if gcc PIC flag -fno-common -DPIC works configure:10804: gcc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5 configure:10808: $? = 0 configure:10821: result: yes configure:10850: checking if gcc static flag -static works configure:10878: result: no configure:10893: checking if gcc supports -c -o file.o configure:10914: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:10918: $? = 0 configure:10940: result: yes configure:10948: checking if gcc supports -c -o file.o configure:10995: result: yes configure:11028: checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:12185: result: yes configure:12425: checking dynamic linker characteristics configure:13170: result: darwin13.3.0 dyld configure:13277: checking how to hardcode library paths into programs configure:13302: result: immediate configure:13842: checking whether stripping libraries is possible configure:13856: result: yes configure:13882: checking if libtool supports shared libraries configure:13884: result: yes configure:13887: checking whether to build shared libraries configure:13908: result: no configure:13911: checking whether to build static libraries configure:13915: result: yes configure:13938: checking how to run the C++ preprocessor configure:14004: result: g++ -E configure:14024: g++ -E conftest.cpp configure:14024: $? = 0 configure:14038: g++ -E conftest.cpp conftest.cpp:23:10: fatal error: 'ac_nonexistent.h' file not found #include ^ 1 error generated. configure:14038: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:14207: checking for ld used by g++ configure:14274: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld configure:14281: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld configure:14296: result: no configure:14351: checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:15356: result: yes configure:15392: g++ -c -g -O2 conftest.cpp >&5 configure:15395: $? = 0 configure:15915: checking for g++ option to produce PIC configure:15922: result: -fno-common -DPIC configure:15930: checking if g++ PIC flag -fno-common -DPIC works configure:15948: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5 configure:15952: $? = 0 configure:15965: result: yes configure:15988: checking if g++ static flag -static works configure:16016: result: no configure:16028: checking if g++ supports -c -o file.o configure:16049: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 configure:16053: $? = 0 configure:16075: result: yes configure:16080: checking if g++ supports -c -o file.o configure:16127: result: yes configure:16157: checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries configure:16196: result: yes configure:16337: checking dynamic linker characteristics configure:17016: result: darwin13.3.0 dyld configure:17069: checking how to hardcode library paths into programs configure:17094: result: immediate configure:22783: checking for known C compilers configure:22804: gcc -c -g -O2 conftest.c >&5 conftest.c:25:4: error: unknown type name 'choke' choke me ^ conftest.c:25:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:22804: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:23176: result: GNU configure:23184: checking for known compiler/OS combinations configure:23258: result: GNU:x86_64 configure:23272: checking for known c++ compilers configure:23293: g++ -c -g -O2 conftest.cpp >&5 conftest.cpp:25:4: error: unknown type name 'choke' choke me ^ conftest.cpp:25:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:23293: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #ifndef __INTEL_COMPILER | choke me | #endif | int | main () | { | | ; | return 0; | } configure:23688: result: GNU configure:23696: checking for known compiler/OS combinations configure:23758: result: GNU:x86_64 configure:23945: checking whether make supports nested variables configure:23962: result: yes configure:23975: checking whether byte ordering is bigendian configure:23990: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:23990: $? = 0 configure:24035: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:24035: $? = 0 configure:24053: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:30:4: error: use of undeclared identifier 'not' not big endian ^ 1 error generated. configure:24053: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:24181: result: no configure:24201: checking if platform is IBM BlueGene configure:24218: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:25:4: error: unknown type name 'choke' choke me ^ conftest.c:25:12: error: expected ';' after top level declarator choke me ^ ; 2 errors generated. configure:24218: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | #ifndef __bg__ | choke me | #endif | int | main () | { | | ; | return 0; | } configure:24223: result: no configure:24231: checking for gunzip configure:24247: found /opt/local/bin/gunzip configure:24258: result: gunzip -c configure:24268: checking for gzip configure:24295: result: gunzip -c configure:24305: checking for zcat configure:24332: result: gunzip -c configure:24355: checking if C++ compiler supports template class specialization configure:24379: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 configure:24379: $? = 0 configure:24392: result: yes configure:24402: checking if C++ compiler supports template function specialization configure:24427: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 configure:24427: $? = 0 configure:24440: result: yes configure:24458: checking if g++ works configure:24471: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:23:16: warning: private field 'i' is not used [-Wunused-private-field] class Cl { int i; public: Cl(int x) : i(x) {} }; Cl x(5); ^ 1 warning generated. configure:24471: $? = 0 configure:24485: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:28:4: error: unknown type name 'choke' choke me ^ 1 error generated. configure:24485: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | #ifdef __cplusplus | choke me | #endif | ; | return 0; | } configure:24489: result: yes configure:25299: checking for vsnprintf configure:25299: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lm >&5 conftest.c:46:6: warning: incompatible redeclaration of library function 'vsnprintf' [-Wincompatible-library-redeclaration] char vsnprintf (); ^ conftest.c:46:6: note: 'vsnprintf' is a builtin with type 'int (char *, unsigned long, const char *, __va_list_tag *)' 1 warning generated. configure:25299: $? = 0 configure:25299: result: yes configure:25311: checking if std::vector has templatized insert method configure:25346: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 configure:25346: $? = 0 configure:25359: result: yes configure:25367: checking if std::copy must be old SGI format configure:25398: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 conftest.cpp:35:9: warning: unused variable 'b' [-Wunused-variable] int* a, b = std::count(a, a, 5); ^ conftest.cpp:35:24: warning: variable 'a' is uninitialized when used here [-Wuninitialized] int* a, b = std::count(a, a, 5); ^ conftest.cpp:35:7: note: initialize the variable 'a' to silence this warning int* a, b = std::count(a, a, 5); ^ = NULL 2 warnings generated. configure:25398: $? = 0 configure:25411: result: no configure:25444: checking for inttypes.h configure:25444: result: yes configure:25452: checking for stdint.h configure:25452: result: yes configure:25460: checking for sys/types.h configure:25460: result: yes configure:25468: checking stddef.h usability configure:25468: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:25468: $? = 0 configure:25468: result: yes configure:25468: checking stddef.h presence configure:25468: gcc -E conftest.c configure:25468: $? = 0 configure:25468: result: yes configure:25468: checking for stddef.h configure:25468: result: yes configure:25476: checking for stdlib.h configure:25476: result: yes configure:25489: checking size of void * configure:25494: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c -lm >&5 configure:25494: $? = 0 configure:25494: ./conftest configure:25494: $? = 0 configure:25508: result: 8 configure:25554: checking for size_t configure:25554: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:25554: $? = 0 configure:25554: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:73:21: error: expected expression if (sizeof ((size_t))) ^ 1 error generated. configure:25554: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:25554: result: yes configure:25600: checking for ptrdiff_t configure:25600: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 configure:25600: $? = 0 configure:25600: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:74:24: error: expected expression if (sizeof ((ptrdiff_t))) ^ 1 error generated. configure:25600: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:25600: result: yes configure:25748: checking size of EntityHandle configure:25750: result: 8 configure:25765: checking if iMesh support is to be built configure:25767: result: yes configure:25783: checking if iGeom support is to be built configure:25785: result: no configure:25849: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:790: creating libtool configure:28003: checking ieeefp.h usability configure:28003: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.c >&5 conftest.c:69:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:28003: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:28003: result: no configure:28003: checking ieeefp.h presence configure:28003: gcc -E conftest.c conftest.c:36:10: fatal error: 'ieeefp.h' file not found #include ^ 1 error generated. configure:28003: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:28003: result: no configure:28003: checking for ieeefp.h configure:28003: result: no configure:28024: checking for C++ unordered_map configure:28055: g++ -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG conftest.cpp >&5 configure:28055: $? = 0 configure:28116: result: std configure:28842: checking for deflate in -lz configure:28875: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lz -lm >&5 configure:28875: $? = 0 configure:28884: result: yes configure:28920: checking for SZ_Decompress in -lsz configure:28953: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lsz -lm >&5 ld: library not found for -lsz clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:28953: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Decompress (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return SZ_Decompress (); | ; | return 0; | } configure:28962: result: no configure:28998: checking if HDF5 support is enabled configure:29014: result: yes configure:29056: checking hdf5.h usability configure:29056: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'hdf5.h' file not found #include ^ 1 error generated. configure:29056: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29056: result: no configure:29056: checking hdf5.h presence configure:29056: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'hdf5.h' file not found #include ^ 1 error generated. configure:29056: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:29056: result: no configure:29056: checking for hdf5.h configure:29056: result: no configure:29134: checking for H5Fopen in -lhdf5 configure:29167: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:29167: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29177: result: no configure:29190: checking for H5Fopen in -lhdf5 configure:29223: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:29223: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29233: result: no configure:29247: checking for H5Fopen in -lhdf5 configure:29280: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:29280: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29290: result: no configure:29303: checking for H5Fopen in -lhdf5 configure:29336: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lpthread -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:29336: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:29346: result: no configure:29592: WARNING: HDF5 library not found or not usable. configure:29611: WARNING: Support for native HDF5 file format disabled configure:29746: checking if CCMIO support is enabled configure:29760: result: yes configure:29768: checking if CCMIO support available configure:29770: result: configure:29802: checking ccmio.h usability configure:29802: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:29802: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29802: result: no configure:29802: checking ccmio.h presence configure:29802: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'ccmio.h' file not found #include ^ 1 error generated. configure:29802: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:29802: result: no configure:29802: checking for ccmio.h configure:29802: result: no configure:29816: checking ccmioutility.h usability configure:29816: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:29816: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29816: result: no configure:29816: checking ccmioutility.h presence configure:29816: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'ccmioutility.h' file not found #include ^ 1 error generated. configure:29816: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:29816: result: no configure:29816: checking for ccmioutility.h configure:29816: result: no configure:29830: checking ccmiocore.h usability configure:29830: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:29830: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:29830: result: no configure:29830: checking ccmiocore.h presence configure:29830: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'ccmiocore.h' file not found #include ^ 1 error generated. configure:29830: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:29830: result: no configure:29830: checking for ccmiocore.h configure:29830: result: no configure:29849: checking unsuccessful, Ccmio support disabled configure:29851: result: configure:29887: checking if DAMSEL support is enabled configure:29904: result: no configure:29909: checking if DAMSEL support available configure:29911: result: configure:30009: checking if NetCDF support is enabled configure:30023: result: yes configure:30055: checking for nc-config configure:30086: result: no configure:30103: WARNING: "NetCDF configuration utility not found" configure:30121: checking netcdf.h usability configure:30121: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'netcdf.h' file not found #include ^ 1 error generated. configure:30121: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:30121: result: no configure:30121: checking netcdf.h presence configure:30121: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'netcdf.h' file not found #include ^ 1 error generated. configure:30121: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:30121: result: no configure:30121: checking for netcdf.h configure:30121: result: no configure:30195: WARNING: NetCDF header not found. configure:30204: checking for nc_create in -lnetcdf configure:30237: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lnetcdf -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30237: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30246: result: no configure:30321: checking for H5Fopen in -lhdf5 configure:30354: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30354: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:30364: result: no configure:30377: checking for H5Fopen in -lhdf5 configure:30410: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30410: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:30420: result: no configure:30434: checking for H5Fopen in -lhdf5 configure:30467: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30467: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:30477: result: no configure:30490: checking for H5Fopen in -lhdf5 configure:30523: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lpthread -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30523: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:30533: result: no configure:30773: checking for nc_create in -lnetcdf configure:30806: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lnetcdf -lhdf5_hl -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30806: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30815: result: no configure:30824: checking for nc_create in -lnetcdf configure:30857: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lnetcdf -lhdf5_hl -lcurl -lm >&5 ld: library not found for -lnetcdf clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:30857: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char nc_create (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return nc_create (); | ; | return 0; | } configure:30866: result: no configure:30892: WARNING: "NetCDF support disabled" configure:30942: checking if Pnetcdf support is enabled configure:30948: result: no configure:31163: checking if CGNS support is enabled configure:31177: result: yes configure:31220: checking cgnslib.h usability configure:31220: gcc -c -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c >&5 conftest.c:69:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:31220: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:31220: result: no configure:31220: checking cgnslib.h presence configure:31220: gcc -E -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c conftest.c:36:10: fatal error: 'cgnslib.h' file not found #include ^ 1 error generated. configure:31220: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | #include configure:31220: result: no configure:31220: checking for cgnslib.h configure:31220: result: no configure:31224: WARNING: CGNS header not found. configure:31231: checking for cg_open in -lcgns configure:31264: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lcgns -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31264: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31273: result: no configure:31348: checking for H5Fopen in -lhdf5 configure:31381: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31381: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:31391: result: no configure:31404: checking for H5Fopen in -lhdf5 configure:31437: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31437: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:31447: result: no configure:31461: checking for H5Fopen in -lhdf5 configure:31494: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31494: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:31504: result: no configure:31517: checking for H5Fopen in -lhdf5 configure:31550: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lhdf5 -lz -ldl -lpthread -lm >&5 ld: library not found for -lhdf5 clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31550: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:31560: result: no configure:31800: checking for cg_open in -lcgns configure:31833: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lcgns -lhdf5_hl -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31833: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31842: result: no configure:31851: checking for cg_open in -lcgns configure:31884: gcc -o conftest -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set conftest.c -lcgns -lhdf5_hl -lcurl -lm >&5 ld: library not found for -lcgns clang: error: linker command failed with exit code 1 (use -v to see invocation) configure:31884: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MOAB" | #define PACKAGE_TARNAME "moab" | #define PACKAGE_VERSION "4.7.0pre" | #define PACKAGE_STRING "MOAB 4.7.0pre" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define PACKAGE "moab" | #define VERSION "4.7.0pre" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MOAB_HAVE_INTTYPES_H /**/ | #define MOAB_HAVE_STDINT_H /**/ | #define MOAB_HAVE_SYS_TYPES_H /**/ | #define MOAB_HAVE_STDDEF_H /**/ | #define MOAB_HAVE_STDLIB_H /**/ | #define SIZEOF_VOID_P 8 | #define MOAB_HAVE_SIZE_T /**/ | #define MOAB_HAVE_PTRDIFF_T /**/ | #define MB_VERSION "4.7.0pre" | #define MB_VERSION_MAJOR 4 | #define MB_VERSION_MINOR 7 | #define MB_VERSION_PATCH 0pre | #define MB_VERSION_STRING "MOAB 4.7.0pre" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cg_open (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return cg_open (); | ; | return 0; | } configure:31893: result: no configure:31919: WARNING: "CGNS support disabled" configure:32016: checking for doxygen configure:32049: result: no configure:32258: checking if mbconvert is to be built configure:32260: result: yes configure:32286: checking if hexmodops is to be built configure:32288: result: yes configure:32314: checking if qvdual is to be built configure:32316: result: no configure:32342: checking if vtkMOABReader is to be built configure:32344: result: no configure:32370: checking if mbsize is to be built configure:32372: result: yes configure:32398: checking if mbskin is to be built configure:32400: result: yes configure:32426: checking if mbtagprop is to be built configure:32428: result: yes configure:32454: checking if mbmem is to be built configure:32456: result: yes configure:32482: checking if mcnpmit is to be built configure:32484: result: no configure:32510: checking if mbcoupler is to be built configure:32512: result: no configure:32538: checking if spheredecomp is to be built configure:32540: result: yes configure:32566: checking if mbsurfplot is to be built configure:32568: result: yes configure:32594: checking if mbzoltan is to be built configure:32596: result: no configure:32622: checking if dagmc is to be built configure:32624: result: no configure:32650: checking if gsets is to be built configure:32652: result: yes configure:32678: checking if mbdepth is to be built configure:32680: result: yes configure:32706: checking if refiner is to be built configure:32708: result: no configure:32734: checking if h5mtools is to be built configure:32736: result: no configure:32762: checking if mbcslam is to be built configure:32764: result: no configure:32790: checking if ahf is to be built configure:32792: result: no configure:36651: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by MOAB config.status 4.7.0pre, which was generated by GNU Autoconf 2.68. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on dyna6-93.cs.uoregon.edu config.status:1449: creating Makefile config.status:1449: creating moab.make config.status:1449: creating MOABConfig.cmake config.status:1449: creating src/Makefile config.status:1449: creating src/io/Makefile config.status:1449: creating src/io/mhdf/Makefile config.status:1449: creating src/LocalDiscretization/Makefile config.status:1449: creating src/parallel/Makefile config.status:1449: creating src/oldinc/Makefile config.status:1449: creating test/Makefile config.status:1449: creating test/dagmc/Makefile config.status:1449: creating test/h5file/Makefile config.status:1449: creating test/dual/Makefile config.status:1449: creating test/obb/Makefile config.status:1449: creating test/perf/Makefile config.status:1449: creating test/perf/point_location/Makefile config.status:1449: creating test/io/Makefile config.status:1449: creating test/parallel/Makefile config.status:1449: creating test/oldinc/Makefile config.status:1449: creating itaps/iBase_f.h config.status:1449: creating itaps/Makefile config.status:1449: creating itaps/imesh/Makefile config.status:1449: creating itaps/imesh/iMesh-Defs.inc config.status:1449: creating itaps/igeom/Makefile config.status:1449: creating itaps/igeom/FBiGeom-Defs.inc config.status:1449: creating tools/Makefile config.status:1449: creating tools/refiner/Makefile config.status:1449: creating tools/mbcoupler/Makefile config.status:1449: creating tools/mbcslam/Makefile config.status:1449: creating tools/mbzoltan/Config.moab config.status:1449: creating tools/mbzoltan/Makefile config.status:1449: creating tools/mcnpmit/Makefile config.status:1449: creating tools/qvdual/Makefile config.status:1449: creating tools/dagmc/Makefile config.status:1449: creating tools/vtkMOABReader/CMakeLists.txt config.status:1449: creating doc/user.dox config.status:1449: creating doc/config.tex config.status:1449: creating MeshFiles/Makefile config.status:1449: creating MeshFiles/unittest/Makefile config.status:1449: creating MeshFiles/unittest/io/Makefile config.status:1449: creating MeshFiles/unittest/iGeom/Makefile config.status:1449: creating MeshFiles/unittest/dagmc/Makefile config.status:1449: creating config.h config.status:1449: creating src/moab/Version.h config.status:1630: src/moab/Version.h is unchanged config.status:1449: creating src/moab/EntityHandle.hpp config.status:1630: src/moab/EntityHandle.hpp is unchanged config.status:1449: creating src/parallel/moab_mpi_config.h config.status:1630: src/parallel/moab_mpi_config.h is unchanged config.status:1449: creating src/FCDefs.h config.status:1678: executing depfiles commands config.status:1678: executing libtool commands config.status:1678: executing src/MOAB_FCDefs.h commands configure:39681: result: C: gcc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set configure:39683: result: C++: g++ -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set configure:39699: WARNING: ************************************************************************* * MOAB has been configured w/out the HDF5 library. * Support for native file format is disabled! ************************************************************************* configure:39712: WARNING: ************************************************************************* * MOAB has been configured w/out the NetCDF library. * Support for ExodusII/Genesis and other file formats is disabled! ************************************************************************* ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-apple-darwin13.3.0 ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPIEXEC_NP_set= ac_cv_env_MPIEXEC_NP_value= ac_cv_env_MPIEXEC_set= ac_cv_env_MPIEXEC_value= ac_cv_env_NP_set= ac_cv_env_NP_value= ac_cv_env_QTDIR_set= ac_cv_env_QTDIR_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=no ac_cv_fc_compiler_gnu=no ac_cv_func_vsnprintf=yes ac_cv_header_ccmio_h=no ac_cv_header_ccmiocore_h=no ac_cv_header_ccmioutility_h=no ac_cv_header_cgnslib_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_hdf5_h=no ac_cv_header_ieeefp_h=no ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_netcdf_h=no ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-apple-darwin13.3.0 ac_cv_lib_cgns_cg_open=no ac_cv_lib_hdf5___H5Fopen=no ac_cv_lib_netcdf_nc_create=no ac_cv_lib_sz_SZ_Decompress=no ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_NC_CONFIG=no ac_cv_path_SED=sed ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_AWK=awk ac_cv_prog_CPP='gcc -E' ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_SED=sed ac_cv_prog_ZCAT='gunzip -c' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_DSYMUTIL=dsymutil ac_cv_prog_ac_ct_LIPO=lipo ac_cv_prog_ac_ct_NMEDIT=nmedit ac_cv_prog_ac_ct_OTOOL=otool ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=no ac_cv_prog_fc_g=no ac_cv_prog_make_make_set=yes ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-apple-darwin13.3.0 ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes fathom_cv_std_count_old_sgi=no fathom_cv_std_vector_templatized_insert=yes lt_cv_apple_cc_single_mod=yes lt_cv_ar_at_file=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_exported_symbols_list=yes lt_cv_ld_force_load=yes lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_LDCXX=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld lt_cv_path_NM=/opt/local/bin/nm lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_pic='-fno-common -DPIC' lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_gnu_ld=no lt_cv_prog_gnu_ldcxx=no lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=196608 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop mk_cv_cxx_unordered_map=std snl_cv_template_func_specialization=yes snl_cv_template_specialization=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CFLAGS='' AM_CPPFLAGS=' -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 ' AM_CXXFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_FCFLAGS='' AM_FFLAGS='' AM_LDFLAGS=' ' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/missing --run autoconf' AUTOHEADER='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/missing --run autoheader' AUTOMAKE='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/missing --run automake-1.11' AWK='awk' CC='gcc' CCDEPMODE='depmode=gcc3' CCMIO_FILE_FALSE='' CCMIO_FILE_TRUE='#' CCMIO_LIBS='' CFLAGS=' -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG' CGM_CPPFLAGS='' CGM_DIR='' CGM_LDFLAGS='' CGM_LIBS='' CGM_LTFLAGS='' CGNS_FILE_FALSE='' CGNS_FILE_TRUE='#' CGNS_LIBS='' CPP='gcc -E' CPPFLAGS=' -DUNORDERED_MAP_NS=std -DHAVE_UNORDERED_MAP=unordered_map -DHAVE_UNORDERED_SET=unordered_set' CXX='g++' CXXCPP='g++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG' CYGPATH_W='echo' DAMSEL_FILE_FALSE='' DAMSEL_FILE_TRUE='#' DAMSEL_LIBS='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DISTCHECK_CONFIGURE_FLAGS=' CC="gcc" CXX="g++" FC="" F77="" LDFLAGS=" " LIBS=" -lm"' DLLTOOL='false' DOXYGEN='no' DSYMUTIL='dsymutil' DUMPBIN='' ECHO_C='\c' ECHO_N='' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLE_DOCS_FALSE='' ENABLE_DOCS_TRUE='#' ENABLE_FORTRAN_FALSE='#' ENABLE_FORTRAN_TRUE='' ENABLE_ahf_FALSE='' ENABLE_ahf_TRUE='#' ENABLE_dagmc_FALSE='' ENABLE_dagmc_TRUE='#' ENABLE_gsets_FALSE='#' ENABLE_gsets_TRUE='' ENABLE_h5mtools_FALSE='' ENABLE_h5mtools_TRUE='#' ENABLE_hexmodops_FALSE='#' ENABLE_hexmodops_TRUE='' ENABLE_igeom_FALSE='' ENABLE_igeom_TRUE='#' ENABLE_imesh_FALSE='#' ENABLE_imesh_TRUE='' ENABLE_mbconvert_FALSE='#' ENABLE_mbconvert_TRUE='' ENABLE_mbcoupler_FALSE='' ENABLE_mbcoupler_TRUE='#' ENABLE_mbcslam_FALSE='' ENABLE_mbcslam_TRUE='#' ENABLE_mbdepth_FALSE='#' ENABLE_mbdepth_TRUE='' ENABLE_mbmem_FALSE='#' ENABLE_mbmem_TRUE='' ENABLE_mbsize_FALSE='#' ENABLE_mbsize_TRUE='' ENABLE_mbskin_FALSE='#' ENABLE_mbskin_TRUE='' ENABLE_mbsurfplot_FALSE='#' ENABLE_mbsurfplot_TRUE='' ENABLE_mbtagprop_FALSE='#' ENABLE_mbtagprop_TRUE='' ENABLE_mbzoltan_FALSE='' ENABLE_mbzoltan_TRUE='#' ENABLE_mcnpmit_FALSE='' ENABLE_mcnpmit_TRUE='#' ENABLE_qvdual_FALSE='' ENABLE_qvdual_TRUE='#' ENABLE_refiner_FALSE='' ENABLE_refiner_TRUE='#' ENABLE_spheredecomp_FALSE='#' ENABLE_spheredecomp_TRUE='' ENABLE_vtkMOABReader_FALSE='' ENABLE_vtkMOABReader_TRUE='#' EXEEXT='' EXPORT_LDFLAGS=' ' EXPORT_LTFLAGS='' F77='' FC='' FCFLAGS=' -O2' FCLIBS='' FFLAGS=' -O2' FGREP='/usr/bin/grep -F' GREP='/usr/bin/grep' HAVE_CGM_FALSE='' HAVE_CGM_TRUE='#' HAVE_ZCAT_FALSE='' HAVE_ZCAT_TRUE='#' HDF5_FILE_FALSE='' HDF5_FILE_TRUE='#' HDF5_LIBS='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld' LDFLAGS=' ' LIBOBJS='' LIBS=' -lm' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='lipo' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/missing --run makeinfo' MANIFEST_TOOL=':' MKDIR_P='config/install-sh -c -d' MOAB_CGM_DEFINES='' MOAB_CXX_LIBS='' MOAB_CXX_LINKFLAGS='' MOC='' MPE_LIBS='' MPIEXEC='' MPIEXEC_NP='' NC_CONFIG='no' NETCDF_CPPFLAGS='' NETCDF_FILE_FALSE='' NETCDF_FILE_TRUE='#' NETCDF_LDFLAGS='' NETCDF_LIBS='' NETCDF_VERSION='' NM='/opt/local/bin/nm' NMEDIT='nmedit' NP='' OBJDUMP='false' OBJEXT='o' OLD_HEADERS_FALSE='#' OLD_HEADERS_TRUE='' OTOOL64=':' OTOOL='otool' PACKAGE='moab' PACKAGE_BUGREPORT='' PACKAGE_NAME='MOAB' PACKAGE_STRING='MOAB 4.7.0pre' PACKAGE_TARNAME='moab' PACKAGE_URL='' PACKAGE_VERSION='4.7.0pre' PARALLEL_FALSE='' PARALLEL_HDF5_FALSE='' PARALLEL_HDF5_TRUE='#' PARALLEL_TRUE='#' PATH_SEPARATOR=':' PNETCDF_FILE_FALSE='' PNETCDF_FILE_TRUE='#' PNETCDF_LIBS='' QTDIR='' QVDUAL_INCLUDES='' QVDUAL_LIBS='' RANLIB='ranlib' SED='sed' SET_MAKE='' SHELL='/bin/sh' SIZEOF_VOID_P='8' STRIP='strip' UIC='' USE_MPIEXEC_FALSE='#' USE_MPIEXEC_TRUE='' USE_MPI_FALSE='' USE_MPI_TRUE='#' VERSION='4.7.0pre' VTK_INCLUDES='' VTK_INC_DIR='' VTK_LIBS='' VTK_LIB_DIR='' WITH_MPE='' XMKMF='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ZCAT='gunzip -c' ZOLTAN_INC_FLAGS='' ZOLTAN_LIBS='' ZOLTAN_LIB_FLAGS='' ac_ct_AR='ar' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-apple-darwin13.3.0' build_alias='' build_cpu='x86_64' build_os='darwin13.3.0' build_vendor='apple' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-apple-darwin13.3.0' host_alias='' host_cpu='x86_64' host_os='darwin13.3.0' host_vendor='apple' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /Users/lab/Documents/moab-4.7.0pre/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(top_builddir)/config/install-sh -c -d' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr/local' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-apple-darwin13.3.0' target_alias='' target_cpu='x86_64' target_os='darwin13.3.0' target_vendor='apple' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "MOAB" #define PACKAGE_TARNAME "moab" #define PACKAGE_VERSION "4.7.0pre" #define PACKAGE_STRING "MOAB 4.7.0pre" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define PACKAGE "moab" #define VERSION "4.7.0pre" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define MOAB_HAVE_INTTYPES_H /**/ #define MOAB_HAVE_STDINT_H /**/ #define MOAB_HAVE_SYS_TYPES_H /**/ #define MOAB_HAVE_STDDEF_H /**/ #define MOAB_HAVE_STDLIB_H /**/ #define SIZEOF_VOID_P 8 #define MOAB_HAVE_SIZE_T /**/ #define MOAB_HAVE_PTRDIFF_T /**/ #define MB_VERSION "4.7.0pre" #define MB_VERSION_MAJOR 4 #define MB_VERSION_MINOR 7 #define MB_VERSION_PATCH 0pre #define MB_VERSION_STRING "MOAB 4.7.0pre" configure: exit 0