<html><head><style type='text/css'>p { margin: 0; }</style></head><body><div style='font-family: times new roman,new york,times,serif; font-size: 12pt; color: #000000'>Hello,<br>This error indicates that for parallel shared builds, some tests executables are linked against the installation folder, not the build folder.<br>Something is wrong, the error appears first in perf/point_location; this depends on mbcoupler, which needs iMesh. libiMesh.la has a reference to the installation through the "relink_command" (at least this is what I think it is happening)<br><br>Of course, it is hard to reproduce the error, because the installation went through, and now the linking finds the new method (ParallelComm::update_shared_mesh()). So the next build will, very likely, succeed.<br><br>We do not use very often these shared parallel builds, because our pnetcdf library and zoltan library are build statically.<br><br>Does anyone have any suggestions?<br>Every time we will have a new method, or a new signature, these shared builds will likely fail :(<br><br>Iulian<br><hr id="zwchr"><blockquote style="border-left:2px solid #1010FF;margin-left:5px;padding-left:5px;color:#000;font-weight:normal;font-style:normal;text-decoration:none;font-family:Helvetica,Arial,sans-serif;font-size:12pt;"><h1><a href="http://gnep.mcs.anl.gov:8010/" target="_blank">Fathom</a>: <a href="http://gnep.mcs.anl.gov:8010/builders/moab-cub-par-sha" target="_blank">moab-cub-par-sha</a> build <a href="http://gnep.mcs.anl.gov:8010/builders/moab-cub-par-sha/builds/426" target="_blank">#426</a></h1>
<table>
<tbody><tr><td><b>Results:</b></td><td>failed test</td></tr>
<tr><td><b>Buildslave:</b></td><td>gnep</td></tr>
<tr><td><b>Revision:</b></td><td>None</td></tr>
</tbody></table>
<h2>Log Excerpt</h2>
<pre>/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1453: warning: unused parameter ‘attr’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1453: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1455: warning: unused parameter ‘oldcomm’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1455: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1455: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_in’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_out’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘win’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘attr’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_in’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_out’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘win’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘attr’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘ex’
mv -f .deps/point_location.Tpo .deps/point_location.Po
/bin/sh ../../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o point_location point_location.o ../../../src/libMOAB.la ../../../tools/mbcoupler/libmbcoupler.la -lm
mv -f .deps/elem_eval_time.Tpo .deps/elem_eval_time.Po
/bin/sh ../../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o elem_eval_time elem_eval_time.o ../../../src/libMOAB.la ../../../tools/mbcoupler/libmbcoupler.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/point_location point_location.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../../src/.libs/libMOAB.so ../../../tools/mbcoupler/.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
mv -f .deps/tree_searching_perf.Tpo .deps/tree_searching_perf.Po
/bin/sh ../../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o tree_searching_perf tree_searching_perf.o ../../../src/libMOAB.la ../../../tools/mbcoupler/libmbcoupler.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/elem_eval_time elem_eval_time.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../../src/.libs/libMOAB.so ../../../tools/mbcoupler/.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
mv -f .deps/sploc_searching_perf.Tpo .deps/sploc_searching_perf.Po
/bin/sh ../../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o sploc_searching_perf sploc_searching_perf.o ../../../src/libMOAB.la ../../../tools/mbcoupler/libmbcoupler.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/tree_searching_perf tree_searching_perf.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../../src/.libs/libMOAB.so ../../../tools/mbcoupler/.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/sploc_searching_perf sploc_searching_perf.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../../src/.libs/libMOAB.so ../../../tools/mbcoupler/.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/homes/fathom/install/cubpar///moab-sha/lib/homeshomeslibiMesh.so.0//:fathomfathom//installinstall//cubparcubpar//moabmoab--shasha//liblib//libiMesh.so.0libiMesh.so.0:: undefinedundefined referencereference toto `` undefined reference to `moab::ParallelComm::update_shared_mesh()'
moab::ParallelComm::update_shared_mesh()'
collect2: ld returned 1 exit status/
collect2: homes/fathom/install/cubpar/moabld returned 1 exit status-
sha/lib/libiMesh.so.0: undefined reference to `moab::ParallelComm::update_shared_mesh()'
collect2: ld returned 1 exit status
moab::ParallelComm::update_shared_mesh()'
collect2: ld returned 1 exit status
...make[5]: *** Waiting for unfinished jobs....
</pre>
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