<html><head><style type='text/css'>p { margin: 0; }</style></head><body><div style='font-family: times new roman,new york,times,serif; font-size: 12pt; color: #000000'>Hello,<br>This error shows that we are linking against the previous installation, not against the latest built library, when we compile shared. Does anybody know a fix for this? <br>It is hard to reproduce, as now, after installation, the current library is installed, so we will not see a link error anymore.<br><br>Iulian<br><br><br>"<br><pre>libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/structured3 structured3.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/homes/fathom/install/cubpar/moab-sha/lib/libiMesh.so.0: undefined reference to `moab::ScdInterface::construct_box(moab::HomCoord, moab::HomCoord, double const*, unsigned int, moab::ScdBox*&, int*, moab::ScdParData*)'"<br><br></pre><br><hr id="zwchr"><blockquote style="border-left:2px solid #1010FF;margin-left:5px;padding-left:5px;color:#000;font-weight:normal;font-style:normal;text-decoration:none;font-family:Helvetica,Arial,sans-serif;font-size:12pt;"><h1><a href="http://gnep.mcs.anl.gov:8010/" target="_blank">Fathom</a>: <a href="http://gnep.mcs.anl.gov:8010/builders/moab-cub-par-sha" target="_blank">moab-cub-par-sha</a> build <a href="http://gnep.mcs.anl.gov:8010/builders/moab-cub-par-sha/builds/354" target="_blank">#354</a></h1>
<table>
<tbody><tr><td><b>Results:</b></td><td>failed test</td></tr>
<tr><td><b>Buildslave:</b></td><td>gnep</td></tr>
<tr><td><b>Revision:</b></td><td>None</td></tr>
</tbody></table>
<h2>Log Excerpt</h2>
<pre>/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_in’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1884: warning: unused parameter ‘attr_out’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘win’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘attr’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1886: warning: unused parameter ‘ex’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘oldwin’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘keyval’
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpicxx.h:1888: warning: unused parameter ‘ex’
parmerge.cpp:146: warning: unused parameter ‘numprocs’
mv -f .deps/structured3.Tpo .deps/structured3.Po
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o uber_parallel_test uber_parallel_test.o ../../src/libMOAB.la -lm
mv -f .deps/parmerge.Tpo .deps/parmerge.Po
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o scdtest scdtest.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/uber_parallel_test uber_parallel_test.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/scdtest scdtest.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o pcomm_serial pcomm_serial.o ../../src/libMOAB.la -lm
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o scdpart scdpart.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/pcomm_serial pcomm_serial.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/scdpart scdpart.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o read_nc_par read_nc.o ../../src/libMOAB.la -lm
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o ucdtrvpart ucdtrvpart.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/read_nc_par read_nc.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/ucdtrvpart ucdtrvpart.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o mpastrvpart mpastrvpart.o ../../src/libMOAB.la -lm
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o parallel_hdf5_test parallel_hdf5_test.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/mpastrvpart mpastrvpart.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/parallel_hdf5_test parallel_hdf5_test.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CC   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicc  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o mhdf_parallel mhdf_parallel.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicc -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/mhdf_parallel mhdf_parallel.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o parallel_write_test parallel_write_test.o ../../src/libMOAB.la -lm
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o par_coupler_test par_coupler_test.o ../../src/libMOAB.la ../../tools/mbcoupler/libmbcoupler.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/parallel_write_test parallel_write_test.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o mbparallelcomm_test mbparallelcomm_test.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/par_coupler_test par_coupler_test.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so ../../tools/mbcoupler/.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/mbparallelcomm_test mbparallelcomm_test.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o partcheck partcheck.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/partcheck partcheck.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o structured3 structured3.o ../../src/libMOAB.la -lm
/bin/sh ../../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -R/homes/fathom/install/cubpar/cgm-sha/lib  -R/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib     -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib  -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib  -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib  -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o parmerge parmerge.o ../../src/libMOAB.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/structured3 structured3.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
/homes/fathom/install/cubpar/moab-sha/lib/libiMesh.so.0: undefined reference to `moab::ScdInterface::construct_box(moab::HomCoord, moab::HomCoord, double const*, unsigned int, moab::ScdBox*&, int*, moab::ScdParData*)'
collect2: ld returned 1 exit status
 ...make[4]: *** Waiting for unfinished jobs....
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o .libs/parmerge parmerge.o  -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/cubpar/cgm-sha/lib -L/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin ../../src/.libs/libMOAB.so -lm -Wl,-rpath -Wl,/homes/fathom/install/cubpar/moab-sha/lib -Wl,-rpath -Wl,/homes/fathom/install/cubpar/cgm-sha/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/cubit/Cubit64/Cubit-12.2/bin
</pre>
</blockquote><br></div></body></html>