<html><head><style type='text/css'>p { margin: 0; }</style></head><body><div style='font-family: times new roman,new york,times,serif; font-size: 12pt; color: #000000'>these should be mine, sorry about it.<br>The one with parallel write test is harder to explain. It could be some conflicts with the fact that we are using now <br>make -j4 check, to speed it up. ( parallel tests, we are also launching them with something like mpiexec -np 2 <test> )<br>Maybe there are some conflicts with that.<br><br>Iulian<br><hr id="zwchr"><blockquote style="border-left:2px solid rgb(16, 16, 255);margin-left:5px;padding-left:5px;"><h1><a href="http://gnep.mcs.anl.gov:8010/" target="_blank">Fathom</a>: <a href="http://gnep.mcs.anl.gov:8010/builders/moab-occ-par" target="_blank">moab-occ-par</a> build <a href="http://gnep.mcs.anl.gov:8010/builders/moab-occ-par/builds/42" target="_blank">#42</a></h1>
<table>
<tbody><tr><td><b>Results:</b></td><td>failed shell test</td></tr>
<tr><td><b>Buildslave:</b></td><td>gnep</td></tr>
<tr><td><b>Revision:</b></td><td>None</td></tr>
</tbody></table>
<h2>Log Excerpt</h2>
<pre>Making check in igeom
make[3]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
make check-am
make[4]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
make testgeom testSmoothGeom testSmooth2
make[5]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest/iGeom -I../../src -I../../src -I.. -I./.. -I../../itaps/imesh -I../../itaps/imesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT testgeom.o -MD -MP -MF .deps/testgeom.Tpo -c -o testgeom.o testgeom.cc
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest/iGeom -I../../src -I../../src -I.. -I./.. -I../../itaps/imesh -I../../itaps/imesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT testSmooth.o -MD -MP -MF .deps/testSmooth.Tpo -c -o testSmooth.o testSmooth.cc
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest/iGeom -I../../src -I../../src -I.. -I./.. -I../../itaps/imesh -I../../itaps/imesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT testSmooth2.o -MD -MP -MF .deps/testSmooth2.Tpo -c -o testSmooth2.o testSmooth2.cc
mv -f .deps/testgeom.Tpo .deps/testgeom.Po
/bin/sh ../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -R/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o testgeom testgeom.o libFBiGeomMOAB.la ../../itaps/imesh/libiMesh.la ../../src/libMOAB.la -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/
4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm
mv -f .deps/testSmooth.Tpo .deps/testSmooth.Po
/bin/sh ../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -R/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o testSmoothGeom testSmooth.o libFBiGeomMOAB.la ../../itaps/imesh/libiMesh.la ../../src/libMOAB.la -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-li
nux-gnu/4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o .libs/testgeom testgeom.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libFBiGeomMOAB.so ../../itaps/imesh/.libs/libiMesh.so ../../src/.libs/libMOAB.so -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/moab/lib -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib
mv -f .deps/testSmooth2.Tpo .deps/testSmooth2.Po
/bin/sh ../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -R/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o testSmooth2 testSmooth2.o libFBiGeomMOAB.la ../../itaps/imesh/libiMesh.la ../../src/libMOAB.la -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linu
x-gnu/4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o .libs/testSmoothGeom testSmooth.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libFBiGeomMOAB.so ../../itaps/imesh/.libs/libiMesh.so ../../src/.libs/libMOAB.so -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/moab/lib -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o .libs/testSmooth2 testSmooth2.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libFBiGeomMOAB.so ../../itaps/imesh/.libs/libiMesh.so ../../src/.libs/libMOAB.so -L/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3 -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.4.3/../../.. -L/usr/lib/x86_64-linux-gnu -lmpichcxx -lmpich -lopa -lpthread -lrt -lstdc++ -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/moab/lib -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib
...make check-TESTS
make[5]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
make[6]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
[0;32mPASS[m: testgeom
[0;32mPASS[m: testSmoothGeom
[0;32mPASS[m: testSmooth2
[0;32m==================
All 3 tests passed
==================
[mmake[6]: Leaving directory `/disks/itaps-buildslave/moab-occ-par/build/itaps/igeom'
...make[3]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/itaps'
make[3]: Nothing to be done for `check-am'.
...Making check in tools
make[2]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/tools'
Making check in .
make[3]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/tools'
make[3]: Nothing to be done for `check-am'.
...Making check in mbcoupler
make[3]: Entering directory `/disks/itaps-buildslave/moab-occ-par/build/tools/mbcoupler'
/bin/sh ../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -R/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o addfield addfield.o libmbcoupler.la -lm
/bin/sh ../../libtool --tag=CXX --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -R/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -o ssn_test ssn_test.o libmbcoupler.la -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o .libs/addfield addfield.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/moab/lib -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o .libs/ssn_test ssn_test.o -L/homes/fathom/3rdparty/netcdf/netcdf-4.0.1/parallel/gcc/lib -L/homes/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/homes/fathom/3rdparty/hdf5/hdf5-1.8.3/parallel/gcc/lib -L/homes/fathom/install/occpar/cgm/lib -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libmbcoupler.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/moab/lib -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib
./.libs/libmbcoupler.so: undefined reference to `opt_alloc_2'
./.libs/libmbcoupler.so: undefined reference to `opt_free_2'
./.libs/libmbcoupler.so: undefined reference to `opt_findpt_2'
collect2: ld returned 1 exit status
...make[3]: *** Waiting for unfinished jobs....
./.libs/libmbcoupler.so: undefined reference to `opt_alloc_2'
./.libs/libmbcoupler.so: undefined reference to `opt_free_2'
./.libs/libmbcoupler.so: undefined reference to `opt_findpt_2'
collect2: ld returned 1 exit status
</pre>
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