Yea, since the code I removed was in <a href="http://configure.ac">configure.ac</a>, I think you have to run autoconf again, which will update the configure script. Then rerun configure.<br><br>Milad<br><br><div class="gmail_quote">
On Mon, Oct 22, 2012 at 4:23 PM, Iulian Grindeanu <span dir="ltr"><<a href="mailto:iulian@mcs.anl.gov" target="_blank">iulian@mcs.anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div><div style="font-size:12pt;font-family:times new roman,new york,times,serif">a make clean should fix your issues (or distclean?)<br>there are no references now to moabuse , except the folder itself + files, which should be fine <br>
<br><hr><div><div class="h5"><blockquote style="border-left:2px solid rgb(16,16,255);margin-left:5px;padding-left:5px">> OK, I just removed all references to moabuse from <a href="http://configure.ac" target="_blank">configure.ac</a>. So if you<br>
> pull and run autoconf again, things should be ok.<br><br>I just did but the error persists. I'm at -r5820.<br><br>You did not update the configure script to remove references to<br>moabuse and hence it still fails. You will have to update config_files<br>
in config.status and any other references to these files in the<br>configure script. Also, you can add the header and sources to the<br>installation by adding them part of AM_INSTALL or some other variable.<br>So please revert the *.in for sources.<br>
<br>Autotools is a small learning curve. These are easy mistakes to fix<br>and so no worries.<br><br>Best,<br>Vijay<br><br>On Mon, Oct 22, 2012 at 4:12 PM, Milad Fatenejad <<a href="mailto:icksa1@gmail.com" target="_blank">icksa1@gmail.com</a>> wrote:<br>
> Hi Vijay:<br>><br>> OK, I just removed all references to moabuse from <a href="http://configure.ac" target="_blank">configure.ac</a>. So if you<br>> pull and run autoconf again, things should be ok.<br>><br>
> So, the idea was that these files would get copied into the install<br>> directory. I spoke to Iulian today and realized that I kind of screwed this<br>> up. The way it is set up now, the files will get copied into the build<br>
> directory. You are correct that the write thing to do is create a<br>> Makefile.am and work with that. I am new to autoconf and made a lot of<br>> mistakes, so my hope is to just disable all of this until I can learn more.<br>
><br>> My apologies.<br>> Milad<br>><br>><br>> On Mon, Oct 22, 2012 at 3:51 PM, Vijay S. Mahadevan <<a href="mailto:vijay.m@gmail.com" target="_blank">vijay.m@gmail.com</a>><br>> wrote:<br>>><br>
>> Milad,<br>>><br>>> I still get the same configure error after pulling your latest<br>>> changes. I now have a <a href="http://README.moabuse.in" target="_blank">README.moabuse.in</a> but looks like you need to<br>
>> update configure or add Makefile.am for the changes to take effect.<br>>><br>>> config.status: error: cannot find input file:<br>>> examples/moabuse/README.moabuse<br>>><br>>> [vijaysm@janus moab-dev] ls examples/moabuse/<br>
>> Makefile Makefile.in <a href="http://mberr.hpp.in" target="_blank">mberr.hpp.in</a> <a href="http://moabuse1.cpp.in" target="_blank">moabuse1.cpp.in</a> <a href="http://moabuse2.cpp.in" target="_blank">moabuse2.cpp.in</a><br>
>> <a href="http://moabuse3.cpp.in" target="_blank">moabuse3.cpp.in</a> <a href="http://moabuse4.cpp.in" target="_blank">moabuse4.cpp.in</a> <a href="http://README.moabuse.in" target="_blank">README.moabuse.in</a><br>
>><br>>> As Iulian pointed out, why are these configure time files anyway and<br>>> not just sources that get compiled during make ? The hpp/cpp files<br>>> dont need to be inspected during configure and it is unnecessary.<br>
>><br>>> Vijay<br>>><br>>> On Mon, Oct 22, 2012 at 2:52 PM, Milad Fatenejad <<a href="mailto:icksa1@gmail.com" target="_blank">icksa1@gmail.com</a>> wrote:<br>>> > Hi Vijay:<br>>> ><br>
>> > Sorry, this was my fault. I just checked in a fix.<br>>> ><br>>> > Milad<br>>> ><br>>> ><br>>> > On Mon, Oct 22, 2012 at 2:37 PM, Vijay S. Mahadevan <<a href="mailto:vijay.m@gmail.com" target="_blank">vijay.m@gmail.com</a>><br>
>> > wrote:<br>>> >><br>>> >> While updating the repository to the latest version, I pulled and<br>>> >> re-configured with the command below but the configure process gives<br>
>> >> an error message now and stops.<br>>> >><br>>> >> ./configure --prefix=/home/vijaysm/software/opt/moab<br>>> >> --with-hdf5=/home/jain/hdf5-1.8.9 --disable-debug --enable-optimize<br>
>> >> --with-mpi=/soft/mvapich2/1.5.1p1/intel/11.1.059 --enable-mbcoupler<br>>> >> --enable-mbpart --enable-mbsize<br>>> >> --with-netcdf=/home/jain/lib/netcdf-4.1.2<br>>> >> --with-zoltan=/home/jain/lib/Zoltan_v3.3<br>
>> >> --with-parmetis=/home/jain/ParMETIS3_1<br>>> >> checking build system type... x86_64-unknown-linux-gnu<br>>> >> ...<br>>> >> ...<br>>> >> config.status: creating examples/moabuse/Makefile<br>
>> >> config.status: creating examples/moabuse/README.moabuse<br>>> >> config.status: error: cannot find input file:<br>>> >> examples/moabuse/README.moabuse<br>>> >> ------------------------<br>
>> >><br>>> >> When I do an svn up again, I get<br>>> >> Restored 'examples/moabuse/README.moabuse'.<br>>> >><br>>> >> Perhaps somewhere inside configure, the README file is being deleted<br>
>> >> (I checked Makefile.in and it is part of the Clean files). Also I dont<br>>> >> understand the logic for adding a README file as part of the configure<br>>> >> process. This seems to be static and a reconfigure wipes it out. Is<br>
>> >> there a <a href="http://README.moabuse.in" target="_blank">README.moabuse.in</a> that is not in the repository ? Let me know<br>>> >> if you need config.log for more details.<br>>> >><br>
>> >> Thanks,<br>>> >> Vijay<br>>> ><br>>> ><br>><br>><br></blockquote><br></div></div></div></div></blockquote></div><br>