make all-recursive make[1]: Entering directory `/home/tiantian/ITL_MOAB/trunk' Making all in src make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src' make all-recursive make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src' Making all in parallel make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/parallel' make all-am make[5]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/parallel' /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ParallelComm.lo -MD -MP -MF .deps/ParallelComm.Tpo -c -o ParallelComm.lo ParallelComm.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ParallelComm.lo -MD -MP -MF .deps/ParallelComm.Tpo -c ParallelComm.cpp -o ParallelComm.o errmem.h:52:13: warning: 'void buffer_reserve_(buffer*, size_t, const char*)' defined but not used tuple_list.h:62:13: warning: 'void tuple_list_grow(tuple_list*)' defined but not used mv -f .deps/ParallelComm.Tpo .deps/ParallelComm.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ProcConfig.lo -MD -MP -MF .deps/ProcConfig.Tpo -c -o ProcConfig.lo ProcConfig.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ProcConfig.lo -MD -MP -MF .deps/ProcConfig.Tpo -c ProcConfig.cpp -o ProcConfig.o errmem.h:48:13: warning: 'void buffer_init_(buffer*, size_t, const char*)' defined but not used errmem.h:52:13: warning: 'void buffer_reserve_(buffer*, size_t, const char*)' defined but not used errmem.h:61:13: warning: 'void buffer_free(buffer*)' defined but not used mv -f .deps/ProcConfig.Tpo .deps/ProcConfig.Plo /bin/sh 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/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ParallelData.lo -MD -MP -MF .deps/ParallelData.Tpo -c ParallelData.cpp -o ParallelData.o mv -f .deps/ParallelData.Tpo .deps/ParallelData.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ParallelMergeMesh.lo -MD -MP -MF .deps/ParallelMergeMesh.Tpo -c -o ParallelMergeMesh.lo ParallelMergeMesh.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ParallelMergeMesh.lo -MD -MP -MF .deps/ParallelMergeMesh.Tpo -c ParallelMergeMesh.cpp -o ParallelMergeMesh.o ./errmem.h:52:13: warning: 'void buffer_reserve_(buffer*, size_t, const char*)' defined but not used mv -f .deps/ParallelMergeMesh.Tpo .deps/ParallelMergeMesh.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadParallel.lo -MD -MP -MF .deps/ReadParallel.Tpo -c -o ReadParallel.lo ReadParallel.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadParallel.lo -MD -MP -MF .deps/ReadParallel.Tpo -c ReadParallel.cpp -o ReadParallel.o mv -f .deps/ReadParallel.Tpo .deps/ReadParallel.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SharedSetData.lo -MD -MP -MF .deps/SharedSetData.Tpo -c -o SharedSetData.lo SharedSetData.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SharedSetData.lo -MD -MP -MF .deps/SharedSetData.Tpo -c SharedSetData.cpp -o SharedSetData.o mv -f .deps/SharedSetData.Tpo .deps/SharedSetData.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT crystal.lo -MD -MP -MF .deps/crystal.Tpo -c -o crystal.lo crystal.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT crystal.lo -MD -MP -MF .deps/crystal.Tpo -c crystal.c -o crystal.o mv -f .deps/crystal.Tpo .deps/crystal.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT errmem.lo -MD -MP -MF .deps/errmem.Tpo -c -o errmem.lo errmem.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT errmem.lo -MD -MP -MF .deps/errmem.Tpo -c errmem.c -o errmem.o mv -f .deps/errmem.Tpo .deps/errmem.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT transfer.lo -MD -MP -MF .deps/transfer.Tpo -c -o transfer.lo transfer.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT transfer.lo -MD -MP -MF .deps/transfer.Tpo -c transfer.c -o transfer.o errmem.h:48:13: warning: 'buffer_init_' defined but not used errmem.h:61:13: warning: 'buffer_free' defined but not used minmax.h:27:117: warning: 'iminmax_2' defined but not used minmax.h:27:221: warning: 'imin_3' defined but not used minmax.h:27:296: warning: 'imax_3' defined but not used minmax.h:27:372: warning: 'iminmax_3' defined but not used minmax.h:28:147: warning: 'uminmax_2' defined but not used minmax.h:28:276: warning: 'umin_3' defined but not used minmax.h:28:371: warning: 'umax_3' defined but not used minmax.h:28:462: warning: 'uminmax_3' defined but not used minmax.h:29:123: warning: 'rminmax_2' defined but not used minmax.h:29:232: warning: 'rmin_3' defined but not used minmax.h:29:311: warning: 'rmax_3' defined but not used minmax.h:29:390: warning: 'rminmax_3' defined but not used minmax.h:32:13: warning: 'r1norm_1' defined but not used minmax.h:33:13: warning: 'r1norm_2' defined but not used minmax.h:34:13: warning: 'r1norm_3' defined but not used minmax.h:36:13: warning: 'r2norm_1' defined but not used minmax.h:37:13: warning: 'r2norm_2' defined but not used minmax.h:38:13: warning: 'r2norm_3' defined but not used tuple_list.h:33:13: warning: 'tuple_list_init_max' defined but not used tuple_list.h:45:13: warning: 'tuple_list_free' defined but not used mv -f .deps/transfer.Tpo .deps/transfer.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT gs.lo -MD -MP -MF .deps/gs.Tpo -c -o gs.lo gs.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT gs.lo -MD -MP -MF .deps/gs.Tpo -c gs.c -o gs.o errmem.h:48:13: warning: 'buffer_init_' defined but not used errmem.h:52:13: warning: 'buffer_reserve_' defined but not used errmem.h:61:13: warning: 'buffer_free' defined but not used minmax.h:27:117: warning: 'iminmax_2' defined but not used minmax.h:27:221: warning: 'imin_3' defined but not used minmax.h:27:296: warning: 'imax_3' defined but not used minmax.h:27:372: warning: 'iminmax_3' defined but not used minmax.h:28:147: warning: 'uminmax_2' defined but not used minmax.h:28:276: warning: 'umin_3' defined but not used minmax.h:28:371: warning: 'umax_3' defined but not used minmax.h:28:462: warning: 'uminmax_3' defined but not used minmax.h:29:123: warning: 'rminmax_2' defined but not used minmax.h:29:232: warning: 'rmin_3' defined but not used minmax.h:29:311: warning: 'rmax_3' defined but not used minmax.h:29:390: warning: 'rminmax_3' defined but not used minmax.h:32:13: warning: 'r1norm_1' defined but not used minmax.h:33:13: warning: 'r1norm_2' defined but not used minmax.h:34:13: warning: 'r1norm_3' defined but not used minmax.h:36:13: warning: 'r2norm_1' defined but not used minmax.h:37:13: warning: 'r2norm_2' defined but not used minmax.h:38:13: warning: 'r2norm_3' defined but not used mv -f .deps/gs.Tpo .deps/gs.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT tuple_list.lo -MD -MP -MF .deps/tuple_list.Tpo -c -o tuple_list.lo tuple_list.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT tuple_list.lo -MD -MP -MF .deps/tuple_list.Tpo -c tuple_list.c -o tuple_list.o errmem.h:48:13: warning: 'buffer_init_' defined but not used errmem.h:61:13: warning: 'buffer_free' defined but not used minmax.h:27:117: warning: 'iminmax_2' defined but not used minmax.h:27:221: warning: 'imin_3' defined but not used minmax.h:27:296: warning: 'imax_3' defined but not used minmax.h:27:372: warning: 'iminmax_3' defined but not used minmax.h:28:147: warning: 'uminmax_2' defined but not used minmax.h:28:276: warning: 'umin_3' defined but not used minmax.h:28:371: warning: 'umax_3' defined but not used minmax.h:28:462: warning: 'uminmax_3' defined but not used minmax.h:29:123: warning: 'rminmax_2' defined but not used minmax.h:29:232: warning: 'rmin_3' defined but not used minmax.h:29:311: warning: 'rmax_3' defined but not used minmax.h:29:390: warning: 'rminmax_3' defined but not used minmax.h:32:13: warning: 'r1norm_1' defined but not used minmax.h:33:13: warning: 'r1norm_2' defined but not used minmax.h:34:13: warning: 'r1norm_3' defined but not used minmax.h:36:13: warning: 'r2norm_1' defined but not used minmax.h:37:13: warning: 'r2norm_2' defined but not used minmax.h:38:13: warning: 'r2norm_3' defined but not used mv -f .deps/tuple_list.Tpo .deps/tuple_list.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sort.lo -MD -MP -MF .deps/sort.Tpo -c -o sort.lo sort.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sort.lo -MD -MP -MF .deps/sort.Tpo -c sort.c -o sort.o In file included from sort.c:12:0: sort_imp.c: In function 'merge_sort': sort_imp.c:196:3: warning: initializer element is not computable at load time sort_imp.c:196:3: warning: initializer element is not computable at load time sort_imp.c: In function 'merge_index_sort': sort_imp.c:244:3: warning: initializer element is not computable at load time sort_imp.c:244:3: warning: initializer element is not computable at load time In file included from sort.c:36:0: sort_imp.c: In function 'merge_sort_long': sort_imp.c:196:3: warning: initializer element is not computable at load time sort_imp.c:196:3: warning: initializer element is not computable at load time sort_imp.c: In function 'merge_index_sort_long': sort_imp.c:244:3: warning: initializer element is not computable at load time sort_imp.c:244:3: warning: initializer element is not computable at load time mv -f .deps/sort.Tpo .deps/sort.Plo /bin/sh ../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sort_imp.lo -MD -MP -MF .deps/sort_imp.Tpo -c -o sort_imp.lo sort_imp.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sort_imp.lo -MD -MP -MF .deps/sort_imp.Tpo -c sort_imp.c -o sort_imp.o sort_imp.c:1:0: warning: ISO C forbids an empty translation unit mv -f .deps/sort_imp.Tpo .deps/sort_imp.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteHDF5Parallel.lo -MD -MP -MF .deps/WriteHDF5Parallel.Tpo -c -o WriteHDF5Parallel.lo WriteHDF5Parallel.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -DSRCDIR=. -I./.. -I.. -I./../io -I./../io/mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteHDF5Parallel.lo -MD -MP -MF .deps/WriteHDF5Parallel.Tpo -c WriteHDF5Parallel.cpp -o WriteHDF5Parallel.o WriteHDF5Parallel.cpp: In function 'void moab::VALGRIND_MAKE_VEC_UNDEFINED(std::vector&) [with T = std::pair]': WriteHDF5Parallel.cpp:1150:41: instantiated from here WriteHDF5Parallel.cpp:105:5: warning: value computed is not used WriteHDF5Parallel.cpp:105:5: warning: value computed is not used WriteHDF5Parallel.cpp: In function 'void moab::VALGRIND_MAKE_VEC_UNDEFINED(std::vector&) [with T = int]': WriteHDF5Parallel.cpp:1203:41: instantiated from here WriteHDF5Parallel.cpp:105:5: warning: value computed is not used WriteHDF5Parallel.cpp:105:5: warning: value computed is not used mv -f .deps/WriteHDF5Parallel.Tpo .deps/WriteHDF5Parallel.Plo /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libMOABpar.la ParallelComm.lo ProcConfig.lo ParallelData.lo ParallelMergeMesh.lo ReadParallel.lo SharedSetData.lo crystal.lo errmem.lo transfer.lo gs.lo tuple_list.lo sort.lo sort_imp.lo WriteHDF5Parallel.lo -lm libtool: link: ar cru .libs/libMOABpar.a ParallelComm.o ProcConfig.o ParallelData.o ParallelMergeMesh.o ReadParallel.o SharedSetData.o crystal.o errmem.o transfer.o gs.o tuple_list.o sort.o sort_imp.o WriteHDF5Parallel.o libtool: link: ranlib .libs/libMOABpar.a libtool: link: ( cd ".libs" && rm -f "libMOABpar.la" && ln -s "../libMOABpar.la" "libMOABpar.la" ) make[5]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/parallel' make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/parallel' Making all in io make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/io' Making all in mhdf make[5]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/io/mhdf' /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c -o adjacency.lo `test -f 'src/adjacency.c' || echo './'`src/adjacency.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c src/adjacency.c -o adjacency.o mv -f .deps/adjacency.Tpo .deps/adjacency.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c -o connectivity.lo `test -f 'src/connectivity.c' || echo './'`src/connectivity.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c src/connectivity.c -o connectivity.o mv -f .deps/connectivity.Tpo .deps/connectivity.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file-desc.lo -MD -MP -MF .deps/file-desc.Tpo -c -o file-desc.lo `test -f 'src/file-desc.c' || echo './'`src/file-desc.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file-desc.lo -MD -MP -MF .deps/file-desc.Tpo -c src/file-desc.c -o file-desc.o mv -f .deps/file-desc.Tpo .deps/file-desc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c -o file-handle.lo `test -f 'src/file-handle.c' || echo './'`src/file-handle.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c src/file-handle.c -o file-handle.o mv -f .deps/file-handle.Tpo .deps/file-handle.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file.lo -MD -MP -MF .deps/file.Tpo -c -o file.lo `test -f 'src/file.c' || echo './'`src/file.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT file.lo -MD -MP -MF .deps/file.Tpo -c src/file.c -o file.o mv -f .deps/file.Tpo .deps/file.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c -o nodes.lo `test -f 'src/nodes.c' || echo './'`src/nodes.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c src/nodes.c -o nodes.o mv -f .deps/nodes.Tpo .deps/nodes.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c -o sets.lo `test -f 'src/sets.c' || echo './'`src/sets.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c src/sets.c -o sets.o mv -f .deps/sets.Tpo .deps/sets.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT status.lo -MD -MP -MF .deps/status.Tpo -c -o status.lo `test -f 'src/status.c' || echo './'`src/status.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT status.lo -MD -MP -MF .deps/status.Tpo -c src/status.c -o status.o mv -f .deps/status.Tpo .deps/status.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c -o tags.lo `test -f 'src/tags.c' || echo './'`src/tags.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c src/tags.c -o tags.o mv -f .deps/tags.Tpo .deps/tags.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT util.lo -MD -MP -MF .deps/util.Tpo -c -o util.lo `test -f 'src/util.c' || echo './'`src/util.c libtool: compile: /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT util.lo -MD -MP -MF .deps/util.Tpo -c src/util.c -o util.o mv -f .deps/util.Tpo .deps/util.Plo /bin/sh ../../../libtool --tag=CC --mode=link /home/tiantian/mpich2-install/bin/mpicc -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libmhdf.la adjacency.lo connectivity.lo file-desc.lo file-handle.lo file.lo nodes.lo sets.lo status.lo tags.lo util.lo -lhdf5 -lsz -lz -lm libtool: link: ar cru .libs/libmhdf.a adjacency.o connectivity.o file-desc.o file-handle.o file.o nodes.o sets.o status.o tags.o util.o libtool: link: ranlib .libs/libmhdf.a libtool: link: ( cd ".libs" && rm -f "libmhdf.la" && ln -s "../libmhdf.la" "libmhdf.la" ) /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT info.o -MD -MP -MF .deps/info.Tpo -c -o info.o `test -f 'example/info.c' || echo './'`example/info.c mv -f .deps/info.Tpo .deps/info.Po /bin/sh ../../../libtool --tag=CC --mode=link /home/tiantian/mpich2-install/bin/mpicc -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o h5minfo info.o libmhdf.la -lhdf5 -lsz -lz -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicc -Wall -pipe -pedantic -Wno-long-long -o h5minfo info.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ./.libs/libmhdf.a /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicc -I./include -I. -I../../.. -I../../../src/moab -I../../../src/parallel -I../../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT validate.o -MD -MP -MF .deps/validate.Tpo -c -o validate.o `test 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/home/tiantian/szip-2.1/lib/libsz.so -lz -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib make[5]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/io/mhdf' Making all in . make[5]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/io' /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT IODebugTrack.lo -MD -MP -MF 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-DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteGmsh.lo -MD -MP -MF .deps/WriteGmsh.Tpo -c WriteGmsh.cpp -o WriteGmsh.o mv -f .deps/WriteGmsh.Tpo .deps/WriteGmsh.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteSTL.lo -MD -MP -MF .deps/WriteSTL.Tpo -c -o WriteSTL.lo WriteSTL.cpp libtool: compile: 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-I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteSmf.lo -MD -MP -MF .deps/WriteSmf.Tpo -c -o WriteSmf.lo WriteSmf.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteSmf.lo -MD -MP -MF .deps/WriteSmf.Tpo -c WriteSmf.cpp -o WriteSmf.o mv -f .deps/WriteSmf.Tpo .deps/WriteSmf.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c -o WriteTemplate.lo WriteTemplate.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c WriteTemplate.cpp -o WriteTemplate.o mv -f .deps/WriteTemplate.Tpo .deps/WriteTemplate.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c -o WriteVtk.lo WriteVtk.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c WriteVtk.cpp -o WriteVtk.o mv -f .deps/WriteVtk.Tpo .deps/WriteVtk.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c -o ReadNCDF.lo ReadNCDF.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c ReadNCDF.cpp -o ReadNCDF.o mv -f .deps/ReadNCDF.Tpo .deps/ReadNCDF.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c -o WriteNCDF.lo WriteNCDF.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c WriteNCDF.cpp -o WriteNCDF.o WriteNCDF.cpp: In member function 'moab::ErrorCode moab::WriteNCDF::gather_mesh_information(moab::WriteNCDF::ExodusMeshInfo&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&)': WriteNCDF.cpp:536:88: warning: 'virtual moab::ErrorCode moab::Interface::tag_get_data(moab::TagInfo*, const moab::EntityHandle*, int, const void**, int*) const' is deprecated (declared at ../../src/moab/Interface.hpp:1483) WriteNCDF.cpp: In member function 'moab::ErrorCode moab::WriteNCDF::get_valid_sides(moab::Range&, moab::WriteNCDF::ExodusMeshInfo&, int, moab::NeumannSetData&)': WriteNCDF.cpp:630:87: warning: 'virtual moab::ErrorCode moab::Interface::tag_get_data(moab::TagInfo*, const moab::EntityHandle*, int, const void**, int*) const' is deprecated (declared at ../../src/moab/Interface.hpp:1483) mv -f .deps/WriteNCDF.Tpo .deps/WriteNCDF.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c -o WriteSLAC.lo WriteSLAC.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c WriteSLAC.cpp -o WriteSLAC.o mv -f .deps/WriteSLAC.Tpo .deps/WriteSLAC.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadNC.lo -MD -MP -MF .deps/ReadNC.Tpo -c -o ReadNC.lo ReadNC.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReadNC.lo -MD -MP -MF .deps/ReadNC.Tpo -c ReadNC.cpp -o ReadNC.o mv -f .deps/ReadNC.Tpo .deps/ReadNC.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include 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-I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c -o WriteHDF5.lo WriteHDF5.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c WriteHDF5.cpp -o WriteHDF5.o mv -f .deps/WriteHDF5.Tpo .deps/WriteHDF5.Plo /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libmoabio.la IODebugTrack.lo ExoIIUtil.lo FileTokenizer.lo GmshUtil.lo ReadABAQUS.lo ReadGmsh.lo ReadIDEAS.lo ReadMCNP5.lo ReadNASTRAN.lo ReadSmf.lo ReadSms.lo ReadSTL.lo ReadTetGen.lo ReadVtk.lo SMF_State.lo Tqdcfr.lo VtkUtil.lo WriteAns.lo WriteGMV.lo WriteGmsh.lo WriteSTL.lo WriteSmf.lo WriteTemplate.lo WriteVtk.lo ReadNCDF.lo WriteNCDF.lo WriteSLAC.lo ReadNC.lo HDF5Common.lo ReadHDF5.lo ReadHDF5Dataset.lo ReadHDF5VarLen.lo WriteHDF5.lo -lnetcdf -lhdf5_hl -lcurl -lhdf5 -lsz -lz mhdf/libmhdf.la -lm libtool: link: (cd .libs/libmoabio.lax/libmhdf.a && ar x "/home/tiantian/ITL_MOAB/trunk/src/io/mhdf/.libs/libmhdf.a") libtool: link: ar cru .libs/libmoabio.a IODebugTrack.o ExoIIUtil.o FileTokenizer.o GmshUtil.o ReadABAQUS.o ReadGmsh.o ReadIDEAS.o ReadMCNP5.o ReadNASTRAN.o ReadSmf.o ReadSms.o ReadSTL.o ReadTetGen.o ReadVtk.o SMF_State.o Tqdcfr.o VtkUtil.o WriteAns.o WriteGMV.o WriteGmsh.o WriteSTL.o WriteSmf.o WriteTemplate.o WriteVtk.o ReadNCDF.o WriteNCDF.o WriteSLAC.o ReadNC.o HDF5Common.o ReadHDF5.o ReadHDF5Dataset.o ReadHDF5VarLen.o WriteHDF5.o .libs/libmoabio.lax/libmhdf.a/adjacency.o .libs/libmoabio.lax/libmhdf.a/connectivity.o .libs/libmoabio.lax/libmhdf.a/file-desc.o .libs/libmoabio.lax/libmhdf.a/file-handle.o .libs/libmoabio.lax/libmhdf.a/file.o .libs/libmoabio.lax/libmhdf.a/nodes.o .libs/libmoabio.lax/libmhdf.a/sets.o .libs/libmoabio.lax/libmhdf.a/status.o .libs/libmoabio.lax/libmhdf.a/tags.o .libs/libmoabio.lax/libmhdf.a/util.o libtool: link: ranlib .libs/libmoabio.a libtool: link: rm -fr .libs/libmoabio.lax libtool: link: ( cd ".libs" && rm -f "libmoabio.la" && ln -s "../libmoabio.la" "libmoabio.la" ) make[5]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/io' make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/io' Making all in . make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src' /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem 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-MD -MP -MF .deps/AEntityFactory.Tpo -c -o AEntityFactory.lo AEntityFactory.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c AEntityFactory.cpp -o AEntityFactory.o mv -f .deps/AEntityFactory.Tpo .deps/AEntityFactory.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab 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-DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT AffineXform.lo -MD -MP -MF .deps/AffineXform.Tpo -c AffineXform.cpp -o AffineXform.o mv -f .deps/AffineXform.Tpo .deps/AffineXform.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map 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-DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReaderWriterSet.lo -MD -MP -MF .deps/ReaderWriterSet.Tpo -c -o ReaderWriterSet.lo ReaderWriterSet.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReaderWriterSet.lo -MD -MP -MF .deps/ReaderWriterSet.Tpo -c ReaderWriterSet.cpp -o ReaderWriterSet.o mv -f .deps/ReaderWriterSet.Tpo .deps/ReaderWriterSet.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReorderTool.lo -MD -MP -MF .deps/ReorderTool.Tpo -c -o ReorderTool.lo ReorderTool.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ReorderTool.lo -MD -MP -MF .deps/ReorderTool.Tpo -c ReorderTool.cpp -o ReorderTool.o mv -f .deps/ReorderTool.Tpo .deps/ReorderTool.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdElementData.lo -MD -MP -MF .deps/ScdElementData.Tpo -c -o ScdElementData.lo ScdElementData.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdElementData.lo -MD -MP -MF .deps/ScdElementData.Tpo -c ScdElementData.cpp -o ScdElementData.o mv -f .deps/ScdElementData.Tpo .deps/ScdElementData.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdInterface.lo -MD -MP -MF .deps/ScdInterface.Tpo -c -o ScdInterface.lo ScdInterface.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdInterface.lo -MD -MP -MF .deps/ScdInterface.Tpo -c ScdInterface.cpp -o ScdInterface.o ScdInterface.cpp: In member function 'moab::ErrorCode moab::ScdInterface::find_boxes(moab::Range&)': ScdInterface.cpp:88:101: warning: passing NULL to non-pointer argument 2 of 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = std::equal_to, _Tp = long int]' ScdInterface.cpp:88:101: warning: passing NULL to non-pointer argument 2 of 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = std::equal_to, _Tp = long int]' ../src/parallel/errmem.h: At global scope: ../src/parallel/errmem.h:52:13: warning: 'void buffer_reserve_(buffer*, size_t, const char*)' defined but not used ../src/parallel/tuple_list.h:45:13: warning: 'void tuple_list_free(tuple_list*)' defined but not used ../src/parallel/tuple_list.h:62:13: warning: 'void tuple_list_grow(tuple_list*)' defined but not used mv -f .deps/ScdInterface.Tpo .deps/ScdInterface.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdVertexData.lo -MD -MP -MF .deps/ScdVertexData.Tpo -c -o ScdVertexData.lo ScdVertexData.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT ScdVertexData.lo -MD -MP -MF .deps/ScdVertexData.Tpo -c ScdVertexData.cpp -o ScdVertexData.o mv -f .deps/ScdVertexData.Tpo .deps/ScdVertexData.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SequenceData.lo -MD -MP -MF .deps/SequenceData.Tpo -c -o SequenceData.lo SequenceData.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SequenceData.lo -MD -MP -MF .deps/SequenceData.Tpo -c SequenceData.cpp -o SequenceData.o mv -f .deps/SequenceData.Tpo .deps/SequenceData.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SequenceManager.lo -MD -MP -MF .deps/SequenceManager.Tpo -c -o SequenceManager.lo SequenceManager.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SequenceManager.lo -MD -MP -MF .deps/SequenceManager.Tpo -c SequenceManager.cpp -o SequenceManager.o mv -f .deps/SequenceManager.Tpo .deps/SequenceManager.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SetIterator.lo -MD -MP -MF .deps/SetIterator.Tpo -c -o SetIterator.lo SetIterator.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SetIterator.lo -MD -MP -MF .deps/SetIterator.Tpo -c SetIterator.cpp -o SetIterator.o mv -f .deps/SetIterator.Tpo .deps/SetIterator.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT Skinner.lo -MD -MP -MF .deps/Skinner.Tpo -c -o Skinner.lo Skinner.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI 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-DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT UnstructuredElemSeq.lo -MD -MP -MF .deps/UnstructuredElemSeq.Tpo -c -o UnstructuredElemSeq.lo UnstructuredElemSeq.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT UnstructuredElemSeq.lo -MD -MP -MF .deps/UnstructuredElemSeq.Tpo -c UnstructuredElemSeq.cpp -o UnstructuredElemSeq.o mv -f .deps/UnstructuredElemSeq.Tpo .deps/UnstructuredElemSeq.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT Util.lo -MD -MP -MF .deps/Util.Tpo -c -o Util.lo Util.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT Util.lo -MD -MP -MF .deps/Util.Tpo -c Util.cpp -o Util.o mv -f .deps/Util.Tpo .deps/Util.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VarLenDenseTag.lo -MD -MP -MF .deps/VarLenDenseTag.Tpo -c -o VarLenDenseTag.lo VarLenDenseTag.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VarLenDenseTag.lo -MD -MP -MF .deps/VarLenDenseTag.Tpo -c VarLenDenseTag.cpp -o VarLenDenseTag.o mv -f .deps/VarLenDenseTag.Tpo .deps/VarLenDenseTag.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VarLenSparseTag.lo -MD -MP -MF .deps/VarLenSparseTag.Tpo -c -o VarLenSparseTag.lo VarLenSparseTag.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VarLenSparseTag.lo -MD -MP -MF .deps/VarLenSparseTag.Tpo -c VarLenSparseTag.cpp -o VarLenSparseTag.o mv -f .deps/VarLenSparseTag.Tpo .deps/VarLenSparseTag.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c -o VertexSequence.lo VertexSequence.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c VertexSequence.cpp -o VertexSequence.o mv -f .deps/VertexSequence.Tpo .deps/VertexSequence.Plo /bin/sh ../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteUtil.lo -MD -MP -MF .deps/WriteUtil.Tpo -c -o WriteUtil.lo WriteUtil.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I./parallel -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT WriteUtil.lo -MD -MP -MF .deps/WriteUtil.Tpo -c WriteUtil.cpp -o WriteUtil.o mv -f .deps/WriteUtil.Tpo .deps/WriteUtil.Plo /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libMOAB.la -rpath /home/tiantian/ITL_MOAB/trunk/gcc/lib AdaptiveKDTree.lo AEntityFactory.lo AffineXform.lo AxisBox.lo BitPage.lo BitTag.lo BSPTree.lo BSPTreePoly.lo CN.lo CartVect.lo Core.lo DebugOutput.lo DenseTag.lo DualTool.lo EntitySequence.lo Factory.lo FBEngine.lo FileOptions.lo GeomUtil.lo GeomTopoTool.lo HigherOrderFactory.lo HomXform.lo Matrix3.lo MergeMesh.lo MeshSet.lo MeshSetSequence.lo MeshTag.lo MeshTopoUtil.lo OrientedBox.lo OrientedBoxTreeTool.lo PolyElementSeq.lo ProgOptions.lo Range.lo RangeSeqIntersectIter.lo ReadUtil.lo ReaderWriterSet.lo ReorderTool.lo ScdElementData.lo ScdInterface.lo ScdVertexData.lo SequenceData.lo SequenceManager.lo SetIterator.lo Skinner.lo SmoothCurve.lo SmoothFace.lo SparseTag.lo StructuredElementSeq.lo SweptElementData.lo SweptElementSeq.lo SweptVertexData.lo SysUtil.lo TagInfo.lo Types.lo TypeSequenceManager.lo UnstructuredElemSeq.lo Util.lo VarLenDenseTag.lo VarLenSparseTag.lo VertexSequence.lo WriteUtil.lo io/libmoabio.la parallel/libMOABpar.la -lm libtool: link: (cd .libs/libMOAB.lax/libmoabio.a && ar x "/home/tiantian/ITL_MOAB/trunk/src/io/.libs/libmoabio.a") libtool: link: (cd .libs/libMOAB.lax/libMOABpar.a && ar x "/home/tiantian/ITL_MOAB/trunk/src/parallel/.libs/libMOABpar.a") libtool: link: ar cru .libs/libMOAB.a AdaptiveKDTree.o AEntityFactory.o AffineXform.o AxisBox.o BitPage.o BitTag.o BSPTree.o BSPTreePoly.o CN.o CartVect.o Core.o DebugOutput.o DenseTag.o DualTool.o EntitySequence.o Factory.o FBEngine.o FileOptions.o GeomUtil.o GeomTopoTool.o HigherOrderFactory.o HomXform.o Matrix3.o MergeMesh.o MeshSet.o MeshSetSequence.o MeshTag.o MeshTopoUtil.o OrientedBox.o OrientedBoxTreeTool.o PolyElementSeq.o ProgOptions.o Range.o RangeSeqIntersectIter.o ReadUtil.o ReaderWriterSet.o ReorderTool.o ScdElementData.o ScdInterface.o ScdVertexData.o SequenceData.o SequenceManager.o SetIterator.o Skinner.o SmoothCurve.o SmoothFace.o SparseTag.o StructuredElementSeq.o SweptElementData.o SweptElementSeq.o SweptVertexData.o SysUtil.o TagInfo.o Types.o TypeSequenceManager.o UnstructuredElemSeq.o Util.o VarLenDenseTag.o VarLenSparseTag.o VertexSequence.o WriteUtil.o .libs/libMOAB.lax/libmoabio.a/ExoIIUtil.o .libs/libMOAB.lax/libmoabio.a/FileTokenizer.o .libs/libMOAB.lax/libmoabio.a/GmshUtil.o .libs/libMOAB.lax/libmoabio.a/HDF5Common.o .libs/libMOAB.lax/libmoabio.a/IODebugTrack.o .libs/libMOAB.lax/libmoabio.a/ReadABAQUS.o .libs/libMOAB.lax/libmoabio.a/ReadGmsh.o .libs/libMOAB.lax/libmoabio.a/ReadHDF5.o .libs/libMOAB.lax/libmoabio.a/ReadHDF5Dataset.o .libs/libMOAB.lax/libmoabio.a/ReadHDF5VarLen.o .libs/libMOAB.lax/libmoabio.a/ReadIDEAS.o .libs/libMOAB.lax/libmoabio.a/ReadMCNP5.o .libs/libMOAB.lax/libmoabio.a/ReadNASTRAN.o .libs/libMOAB.lax/libmoabio.a/ReadNC.o .libs/libMOAB.lax/libmoabio.a/ReadNCDF.o .libs/libMOAB.lax/libmoabio.a/ReadSTL.o .libs/libMOAB.lax/libmoabio.a/ReadSmf.o .libs/libMOAB.lax/libmoabio.a/ReadSms.o .libs/libMOAB.lax/libmoabio.a/ReadTetGen.o .libs/libMOAB.lax/libmoabio.a/ReadVtk.o .libs/libMOAB.lax/libmoabio.a/SMF_State.o .libs/libMOAB.lax/libmoabio.a/Tqdcfr.o .libs/libMOAB.lax/libmoabio.a/VtkUtil.o .libs/libMOAB.lax/libmoabio.a/WriteAns.o .libs/libMOAB.lax/libmoabio.a/WriteGMV.o .libs/libMOAB.lax/libmoabio.a/WriteGmsh.o .libs/libMOAB.lax/libmoabio.a/WriteHDF5.o .libs/libMOAB.lax/libmoabio.a/WriteNCDF.o .libs/libMOAB.lax/libmoabio.a/WriteSLAC.o .libs/libMOAB.lax/libmoabio.a/WriteSTL.o .libs/libMOAB.lax/libmoabio.a/WriteSmf.o .libs/libMOAB.lax/libmoabio.a/WriteTemplate.o .libs/libMOAB.lax/libmoabio.a/WriteVtk.o .libs/libMOAB.lax/libmoabio.a/adjacency.o .libs/libMOAB.lax/libmoabio.a/connectivity.o .libs/libMOAB.lax/libmoabio.a/file-desc.o .libs/libMOAB.lax/libmoabio.a/file-handle.o .libs/libMOAB.lax/libmoabio.a/file.o .libs/libMOAB.lax/libmoabio.a/nodes.o .libs/libMOAB.lax/libmoabio.a/sets.o .libs/libMOAB.lax/libmoabio.a/status.o .libs/libMOAB.lax/libmoabio.a/tags.o .libs/libMOAB.lax/libmoabio.a/util.o .libs/libMOAB.lax/libMOABpar.a/ParallelComm.o .libs/libMOAB.lax/libMOABpar.a/ParallelData.o .libs/libMOAB.lax/libMOABpar.a/ParallelMergeMesh.o .libs/libMOAB.lax/libMOABpar.a/ProcConfig.o .libs/libMOAB.lax/libMOABpar.a/ReadParallel.o .libs/libMOAB.lax/libMOABpar.a/SharedSetData.o .libs/libMOAB.lax/libMOABpar.a/WriteHDF5Parallel.o .libs/libMOAB.lax/libMOABpar.a/crystal.o .libs/libMOAB.lax/libMOABpar.a/errmem.o .libs/libMOAB.lax/libMOABpar.a/gs.o .libs/libMOAB.lax/libMOABpar.a/sort.o .libs/libMOAB.lax/libMOABpar.a/sort_imp.o .libs/libMOAB.lax/libMOABpar.a/transfer.o .libs/libMOAB.lax/libMOABpar.a/tuple_list.o libtool: link: ranlib .libs/libMOAB.a libtool: link: rm -fr .libs/libMOAB.lax libtool: link: ( cd ".libs" && rm -f "libMOAB.la" && ln -s "../libMOAB.la" "libMOAB.la" ) make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src' Making all in oldinc make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/src/oldinc' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src/oldinc' make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/src' Making all in MeshFiles make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles' Making all in unittest make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest' Making all in io make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest/io' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest/io' make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest' make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles/unittest' make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/MeshFiles' Making all in itaps make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/itaps' Making all in imesh make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/itaps/imesh' make all-am make[4]: Entering directory `/home/tiantian/ITL_MOAB/trunk/itaps/imesh' /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest -I./.. -I../../src -I../../src -I../../test -I../../src/parallel -I../../src/parallel/moab -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c -o iMesh_MOAB.lo iMesh_MOAB.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest -I./.. -I../../src -I../../src -I../../test -I../../src/parallel -I../../src/parallel/moab -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c iMesh_MOAB.cpp -o iMesh_MOAB.o mv -f .deps/iMesh_MOAB.Tpo .deps/iMesh_MOAB.Plo /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest -I./.. -I../../src -I../../src -I../../test -I../../src/parallel -I../../src/parallel/moab -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT iMeshP_MOAB.lo -MD -MP -MF .deps/iMeshP_MOAB.Tpo -c -o iMeshP_MOAB.lo iMeshP_MOAB.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DSRCDIR=. -DMESHDIR=../../MeshFiles/unittest -I./.. -I../../src -I../../src -I../../test -I../../src/parallel -I../../src/parallel/moab -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT iMeshP_MOAB.lo -MD -MP -MF .deps/iMeshP_MOAB.Tpo -c iMeshP_MOAB.cpp -o iMeshP_MOAB.o mv -f .deps/iMeshP_MOAB.Tpo .deps/iMeshP_MOAB.Plo /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libiMesh.la -rpath /home/tiantian/ITL_MOAB/trunk/gcc/lib iMesh_MOAB.lo iMeshP_MOAB.lo ../../src/libMOAB.la -lm libtool: link: ar cru .libs/libiMesh.a iMesh_MOAB.o iMeshP_MOAB.o libtool: link: ranlib .libs/libiMesh.a libtool: link: ( cd ".libs" && rm -f "libiMesh.la" && ln -s "../libiMesh.la" "libiMesh.la" ) make[4]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/itaps/imesh' make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/itaps/imesh' make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/itaps' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/itaps' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/itaps' Making all in tools make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/tools' Making all in . make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/tools' /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT convert.o -MD -MP -MF .deps/convert.Tpo -c -o convert.o convert.cpp mv -f .deps/convert.Tpo .deps/convert.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbconvert convert.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbconvert convert.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT makeops.o -MD -MP -MF .deps/makeops.Tpo -c -o makeops.o makeops.cpp mv -f .deps/makeops.Tpo .deps/makeops.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o hexmodops makeops.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o hexmodops makeops.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT measure.o -MD -MP -MF .deps/measure.Tpo -c -o measure.o measure.cpp mv -f .deps/measure.Tpo .deps/measure.Po /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT size.o -MD -MP -MF .deps/size.Tpo -c -o size.o size.cpp mv -f .deps/size.Tpo .deps/size.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbsize measure.o size.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbsize measure.o size.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT skin.o -MD -MP -MF .deps/skin.Tpo -c -o skin.o skin.cpp mv -f .deps/skin.Tpo .deps/skin.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbskin skin.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbskin skin.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT depth.o -MD -MP -MF .deps/depth.Tpo -c -o depth.o depth.cpp mv -f .deps/depth.Tpo .deps/depth.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbdepth depth.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbdepth depth.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so 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parse.o parse.cpp mv -f .deps/parse.Tpo .deps/parse.Po /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT propagate_tags.o -MD -MP -MF .deps/propagate_tags.Tpo -c -o propagate_tags.o propagate_tags.cpp mv -f .deps/propagate_tags.Tpo .deps/propagate_tags.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbtagprop parse.o propagate_tags.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbtagprop parse.o propagate_tags.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a 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-L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbmem mbmem.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbmem mbmem.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT SphereDecomp.o -MD -MP -MF .deps/SphereDecomp.Tpo -c -o SphereDecomp.o SphereDecomp.cpp mv -f .deps/SphereDecomp.Tpo .deps/SphereDecomp.Po /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT sphere_decomp.o -MD -MP -MF .deps/sphere_decomp.Tpo -c -o sphere_decomp.o sphere_decomp.cpp mv -f .deps/sphere_decomp.Tpo .deps/sphere_decomp.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o spheredecomp SphereDecomp.o sphere_decomp.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o spheredecomp SphereDecomp.o sphere_decomp.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT surfplot.o -MD -MP -MF .deps/surfplot.Tpo -c -o surfplot.o surfplot.cpp mv -f .deps/surfplot.Tpo .deps/surfplot.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbsurfplot surfplot.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbsurfplot surfplot.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT gsets.o -MD -MP -MF .deps/gsets.Tpo -c -o gsets.o gsets.cc mv -f .deps/gsets.Tpo .deps/gsets.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o mbgsets gsets.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o mbgsets gsets.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT parread.o -MD -MP -MF .deps/parread.Tpo -c -o parread.o parread.cpp mv -f .deps/parread.Tpo .deps/parread.Po /bin/sh ../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o parread parread.o ../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o parread parread.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/tools' Making all in dagmc make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/tools/dagmc' /bin/sh ../../libtool --tag=CXX --mode=compile /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c -o DagMC.lo DagMC.cpp libtool: compile: /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c DagMC.cpp -o DagMC.o mv -f .deps/DagMC.Tpo .deps/DagMC.Plo /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o libdagmc.la -rpath /home/tiantian/ITL_MOAB/trunk/gcc/lib DagMC.lo -lm libtool: link: ar cru .libs/libdagmc.a DagMC.o libtool: link: ranlib .libs/libdagmc.a libtool: link: ( cd ".libs" && rm -f "libdagmc.la" && ln -s "../libdagmc.la" "libdagmc.la" ) /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT dagmc_preproc.o -MD -MP -MF .deps/dagmc_preproc.Tpo -c -o dagmc_preproc.o dagmc_preproc.cpp mv -f .deps/dagmc_preproc.Tpo .deps/dagmc_preproc.Po /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT obb_analysis.o -MD -MP -MF .deps/obb_analysis.Tpo -c -o obb_analysis.o obb_analysis.cpp obb_analysis.cpp: In function ‘moab::ErrorCode obbvis_create(moab::DagMC&, std::vector&, int, std::string&)’: obb_analysis.cpp:104:94: warning: ‘moab::ErrorCode moab::Interface::tag_create(const char*, int, moab::TagType, moab::DataType, moab::TagInfo*&, const void*, bool)’ is deprecated (declared at ../../src/moab/Interface.hpp:1275) mv -f .deps/obb_analysis.Tpo .deps/obb_analysis.Po /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o dagmc_preproc dagmc_preproc.o obb_analysis.o libdagmc.la ../../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o dagmc_preproc dagmc_preproc.o obb_analysis.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ./.libs/libdagmc.a ../../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT quads_to_tris_driver.o -MD -MP -MF .deps/quads_to_tris_driver.Tpo -c -o quads_to_tris_driver.o quads_to_tris_driver.cpp mv -f .deps/quads_to_tris_driver.Tpo .deps/quads_to_tris_driver.Po /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src -I../../tools -I../../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT quads_to_tris.o -MD -MP -MF .deps/quads_to_tris.Tpo -c -o quads_to_tris.o quads_to_tris.cpp mv -f .deps/quads_to_tris.Tpo .deps/quads_to_tris.Po /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o quads_to_tris quads_to_tris_driver.o quads_to_tris.o ../../src/libMOAB.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o quads_to_tris quads_to_tris_driver.o quads_to_tris.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../../src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/tools/dagmc' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/tools' Making all in test make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test' Making all in . make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test' Making all in io make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/io' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/io' Making all in dual make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/dual' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/dual' Making all in obb make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/obb' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/obb' Making all in perf make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/perf' /home/tiantian/mpich2-install/bin/mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/include -I/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -isystem /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -I../../src -I../../src/io/mhdf/include -I../../src -DIS_BUILDING_MB -I../../itaps/imesh -I../../itaps -I../../itaps -I../../itaps/imesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -MT point_in_elem.o -MD -MP -MF .deps/point_in_elem.Tpo -c -o point_in_elem.o point_in_elem.cpp mv -f .deps/point_in_elem.Tpo .deps/point_in_elem.Po /bin/sh ../../libtool --tag=CXX --mode=link /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib -o point_in_elem point_in_elem.o ../../src/libMOAB.la ../../itaps/imesh/libiMesh.la -lm libtool: link: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -o point_in_elem point_in_elem.o -L/home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib -L/home/tiantian/zlib-1.2.5/lib -L/home/tiantian/szip-2.1/lib -L/home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib ../../src/.libs/libMOAB.a ../../itaps/imesh/.libs/libiMesh.a /home/tiantian/ITL_MOAB/trunk/src/.libs/libMOAB.a /home/tiantian/ITL_MOAB/netcdf-4.1.3/gcc/lib/libnetcdf.a /usr/lib64/libhdf5_hl.so /usr/lib64/libhdf5.so /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5_hl.a -lcurl /home/tiantian/ITL_MOAB/hdf5-1.8.7/gcc/lib/libhdf5.a /home/tiantian/szip-2.1/lib/libsz.so -lz /home/tiantian/mpich2-install/lib/libopa.a -lpthread /home/tiantian/mpich2-install/lib/libmpl.a -lm -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib -Wl,-rpath -Wl,/home/tiantian/szip-2.1/lib make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/perf' Making all in h5file make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/h5file' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/h5file' Making all in parallel make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/parallel' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/parallel' Making all in oldinc make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/test/oldinc' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test/oldinc' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/test' Making all in doc make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/doc' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/doc' Making all in examples make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk/examples' Making all in itaps make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/examples/itaps' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/examples/itaps' make[3]: Entering directory `/home/tiantian/ITL_MOAB/trunk/examples' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/examples' make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk/examples' make[2]: Entering directory `/home/tiantian/ITL_MOAB/trunk' ./config.status --version | \ sed -e 's/.*options "\(.*\)"/\1/p' -e 'd' | \ sed -e "s/'[[:space:]]'/'\n'/g" >moab.config make[2]: Leaving directory `/home/tiantian/ITL_MOAB/trunk' make[1]: Leaving directory `/home/tiantian/ITL_MOAB/trunk'